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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0851
MET 10.0068
SER 20.0063
THR 30.0062
ILE 40.0058
THR 50.0055
LYS 60.0053
ASP 70.0049
GLN 80.0050
ILE 90.0051
LEU 100.0047
GLU 110.0045
GLY 120.0047
VAL 130.0046
ALA 140.0041
ALA 150.0042
LEU 160.0043
SER 170.0041
VAL 180.0040
MET 190.0043
GLU 200.0046
ILE 210.0046
VAL 220.0047
GLU 230.0050
LEU 240.0052
ILE 250.0051
SER 260.0054
ALA 270.0057
MET 280.0057
GLU 290.0058
GLU 300.0061
LYS 310.0063
PHE 320.0063
GLY 330.0063
VAL 340.0060
SER 350.0056
ALA 360.0053
ALA 370.0052
ALA 380.0057
VAL 390.0056
ALA 400.0053
ALA 410.0056
GLY 420.0059
PRO 430.0063
ALA 440.0063
ALA 450.0061
ALA 460.0063
VAL 470.0066
GLU 480.0062
ALA 490.0061
ALA 500.0064
GLU 510.0064
GLU 520.0065
GLN 530.0062
THR 540.0067
GLU 550.0064
PHE 560.0063
ASP 570.0060
VAL 580.0063
VAL 590.0059
LEU 600.0061
ALA 610.0058
SER 620.0060
PHE 630.0064
GLY 640.0068
GLU 650.0071
ASN 660.0074
LYS 670.0070
VAL 680.0074
ALA 690.0077
VAL 700.0072
ILE 710.0071
LYS 720.0076
ALA 730.0076
VAL 740.0071
ARG 750.0074
GLY 760.0078
ALA 770.0075
THR 780.0072
GLY 790.0075
LEU 800.0071
GLY 810.0071
LEU 820.0071
LYS 830.0066
GLU 840.0064
ALA 850.0066
LYS 860.0064
ASP 870.0059
LEU 880.0060
VAL 890.0062
GLU 900.0058
SER 910.0054
ALA 920.0055
PRO 930.0053
ALA 940.0055
VAL 950.0057
LEU 960.0063
LYS 970.0064
GLU 980.0062
GLY 990.0064
VAL 1000.0068
ASN 1010.0071
LYS 1020.0071
ASP 1030.0076
GLU 1040.0075
ALA 1050.0071
GLU 1060.0073
THR 1070.0078
LEU 1080.0074
LYS 1090.0072
LYS 1100.0077
SER 1110.0078
LEU 1120.0073
GLU 1130.0074
GLU 1140.0079
ALA 1150.0077
GLY 1160.0074
ALA 1170.0069
SER 1180.0065
VAL 1190.0064
GLU 1200.0061
ILE 1210.0062
LYS 1220.0057
GLU 1230.0057
ALA 1240.0057
ALA 1250.0051
ALA 1260.0052
LYS 1270.0050
ALA 1280.0046
TYR 1290.0047
LYS 1300.0044
ILE 1310.0046
ILE 1320.0044
SER 1330.0047
LEU 1340.0047
LYS 1350.0049
TYR 1360.0051
THR 1370.0054
ARG 1380.0058
LYS 1390.0060
VAL 1400.0066
CYS 1410.0069
ILE 1420.0074
GLY 1430.0077
PRO 1440.0083
GLY 1450.0087
PRO 1460.0089
GLY 1470.0090
LYS 1480.0089
ALA 1490.0085
TYR 1500.0082
LYS 1510.0080
ILE 1520.0075
ILE 1530.0074
SER 1540.0069
LEU 1550.0069
LYS 1560.0065
TYR 1570.0065
THR 1580.0062
ARG 1590.0062
LYS 1600.0061
VAL 1610.0061
CYS 1620.0061
GLY 1630.0060
PRO 1640.0065
GLY 1650.0068
PRO 1660.0071
GLY 1670.0074
GLY 1680.0070
LYS 1690.0072
ALA 1700.0068
TYR 1710.0070
LYS 1720.0069
ILE 1730.0069
ILE 1740.0070
SER 1750.0070
LEU 1760.0072
LYS 1770.0072
TYR 1780.0075
THR 1790.0074
ARG 1800.0077
LYS 1810.0076
VAL 1820.0080
GLY 1830.0078
PRO 1840.0080
GLY 1850.0076
PRO 1860.0074
GLY 1870.0073
ILE 1880.0068
ILE 1890.0068
SER 1900.0063
LEU 1910.0063
LYS 1920.0059
TYR 1930.0058
THR 1940.0055
ARG 1950.0054
LYS 1960.0053
VAL 1970.0051
CYS 1980.0050
ILE 1990.0046
GLN 2000.0047
LEU 2010.0042
GLY 2020.0043
GLY 2030.0041
PRO 2040.0036
GLY 2050.0033
PRO 2060.0028
GLY 2070.0029
ASN 2080.0032
ILE 2090.0030
LYS 2100.0027
THR 2110.0032
ALA 2120.0035
PHE 2130.0032
HIS 2140.0032
CYS 2150.0037
TYR 2160.0037
ALA 2170.0035
ALA 2180.0037
TYR 2190.0042
MET 2200.0042
THR 2210.0041
SER 2220.0046
ILE 2230.0050
LYS 2240.0053
ALA 2250.0057
CYS 2260.0062
ASP 2270.0064
LEU 2280.0054
LYS 2290.0054
LYS 2300.0042
PRO 2310.0036
LEU 2320.0022
MET 2330.0042
GLU 2340.0062
SER 2350.0115
GLY 2360.0161
TRP 2370.0163
SER 2380.0190
ASP 2390.0197
THR 2400.0242
ALA 2410.0250
HIS 2420.0297
GLY 2430.0307
LYS 2440.0312
LYS 2450.0324
SER 2460.0317
LEU 2470.0364
PRO 2480.0410
SER 2490.0431
SER 2500.0486
SER 2510.0513
SER 2520.0492
TYR 2530.0437
SER 2540.0441
TYR 2550.0384
ARG 2560.0389
ARG 2570.0334
LYS 2580.0343
LEU 2590.0297
THR 2600.0305
ASN 2610.0274
PRO 2620.0271
ALA 2630.0315
ASN 2640.0368
LYS 2650.0387
GLU 2660.0405
GLU 2670.0401
SER 2680.0434
ILE 2690.0417
LYS 2700.0477
LYS 2710.0480
GLN 2720.0478
LYS 2730.0512
TYR 2740.0498
SER 2750.0548
TYR 2760.0547
PRO 2770.0619
TRP 2780.0616
GLN 2790.0610
THR 2800.0682
SER 2810.0722
LYS 2820.0746
CYS 2830.0764
PHE 2840.0851
ASP 2880.0384
TYR 2890.0267
GLN 2900.0179
TYR 2910.0064
CYS 2970.0083
ASN 2980.0083
PRO 2990.0082
GLY 3000.0085
LYS 3010.0082
LYS 3020.0082
ASN 3030.0077
THR 3040.0073
ILE 3050.0069
SER 3060.0067
GLY 3070.0067
TYR 3080.0061
LYS 3090.0062
ARG 3100.0066
MET 3110.0063
MET 3120.0058
ALA 3130.0061
THR 3140.0063
LYS 3150.0059
ASP 3160.0059
SER 3170.0064
PHE 3180.0062
GLN 3190.0060
SER 3200.0055
PHE 3210.0054
ASN 3220.0050
LEU 3230.0049
THR 3240.0046
GLU 3250.0044
PRO 3260.0046
HIS 3270.0046
ILE 3280.0047
THR 3290.0048
THR 3300.0050
ASN 3310.0055
LYS 3320.0054
LEU 3330.0052
GLU 3340.0052
TRP 3350.0051
ILE 3360.0052
ASP 3370.0055
PRO 3380.0053
ASP 3390.0056
GLY 3400.0061
ASN 3410.0064
THR 3420.0065
ARG 3430.0070
GLY 3440.0072
GLY 3450.0077
GLY 3460.0080
GLY 10.0024
SER 20.0020
HIS 30.0019
SER 40.0016
MET 50.0017
ARG 60.0015
TYR 70.0017
PHE 80.0019
PHE 90.0021
THR 100.0025
SER 110.0029
VAL 120.0033
SER 130.0036
ARG 140.0042
PRO 150.0045
GLY 160.0049
ARG 170.0048
GLY 180.0045
GLU 190.0040
PRO 200.0036
ARG 210.0035
PHE 220.0031
ILE 230.0029
ALA 240.0026
VAL 250.0025
GLY 260.0023
TYR 270.0022
VAL 280.0022
ASP 290.0020
ASP 300.0022
THR 310.0027
GLN 320.0027
PHE 330.0030
VAL 340.0030
ARG 350.0031
PHE 360.0032
ASP 370.0035
SER 380.0036
ASP 390.0041
ALA 400.0043
ALA 410.0046
SER 420.0044
GLN 430.0039
ARG 440.0037
MET 450.0033
GLU 460.0036
PRO 470.0036
ARG 480.0036
ALA 490.0036
PRO 500.0040
TRP 510.0038
ILE 520.0036
GLU 530.0041
GLN 540.0043
GLU 550.0039
GLY 560.0040
PRO 570.0040
GLU 580.0036
TYR 590.0033
TRP 600.0034
ASP 610.0034
GLY 620.0028
GLU 630.0027
THR 640.0031
ARG 650.0028
LYS 660.0023
VAL 670.0025
LYS 680.0028
ALA 690.0023
HIS 700.0021
SER 710.0026
GLN 720.0026
THR 730.0022
HIS 740.0024
ARG 750.0029
VAL 760.0028
ASP 770.0025
LEU 780.0030
GLY 790.0032
THR 800.0029
LEU 810.0029
ARG 820.0034
GLY 830.0035
TYR 840.0032
TYR 850.0035
ASN 860.0040
GLN 870.0040
SER 880.0045
GLU 890.0045
ALA 900.0047
GLY 910.0043
SER 920.0039
HIS 930.0034
THR 940.0029
VAL 950.0024
GLN 960.0021
ARG 970.0016
MET 980.0013
TYR 990.0009
GLY 1000.0010
CYS 1010.0011
ASP 1020.0013
VAL 1030.0018
GLY 1040.0021
SER 1050.0025
ASP 1060.0028
TRP 1070.0025
ARG 1080.0023
PHE 1090.0018
LEU 1100.0015
ARG 1110.0010
GLY 1120.0007
TYR 1130.0003
HIS 1140.0005
GLN 1150.0009
TYR 1160.0014
ALA 1170.0019
TYR 1180.0024
ASP 1190.0028
GLY 1200.0024
LYS 1210.0022
ASP 1220.0018
TYR 1230.0019
ILE 1240.0015
ALA 1250.0010
LEU 1260.0006
LYS 1270.0009
GLU 1280.0008
ASP 1290.0011
LEU 1300.0007
ARG 1310.0010
SER 1320.0012
TRP 1330.0012
THR 1340.0015
ALA 1350.0019
ALA 1360.0022
ASP 1370.0026
MET 1380.0029
ALA 1390.0027
ALA 1400.0022
GLN 1410.0023
THR 1420.0023
THR 1430.0018
LYS 1440.0016
HIS 1450.0018
LYS 1460.0016
TRP 1470.0011
GLU 1480.0012
ALA 1490.0012
ALA 1500.0008
HIS 1510.0005
VAL 1520.0004
ALA 1530.0004
GLU 1540.0006
GLN 1550.0005
LEU 1560.0004
ARG 1570.0007
ALA 1580.0011
TYR 1590.0011
LEU 1600.0010
GLU 1610.0014
GLY 1620.0017
THR 1630.0018
CYS 1640.0017
VAL 1650.0019
GLU 1660.0024
TRP 1670.0024
LEU 1680.0023
ARG 1690.0027
ARG 1700.0030
TYR 1710.0030
LEU 1720.0030
GLU 1730.0035
ASN 1740.0037
GLY 1750.0036
LYS 1760.0036
GLU 1770.0039
THR 1780.0035
LEU 1790.0030
GLN 1800.0031
ARG 1810.0032
THR 1820.0029
ASP 1830.0030
ALA 1840.0028
PRO 1850.0026
LYS 1860.0028
THR 1870.0025
HIS 1880.0025
MET 1890.0023
THR 1900.0025
HIS 1910.0025
HIS 1920.0027
ALA 1930.0027
VAL 1940.0027
SER 1950.0029
ASP 1960.0028
HIS 1970.0023
GLU 1980.0022
ALA 1990.0021
THR 2000.0021
LEU 2010.0018
ARG 2020.0020
CYS 2030.0018
TRP 2040.0022
ALA 2050.0023
LEU 2060.0028
SER 2070.0030
PHE 2080.0026
TYR 2090.0025
PRO 2100.0022
ALA 2110.0019
GLU 2120.0015
ILE 2130.0014
THR 2140.0010
LEU 2150.0011
THR 2160.0007
TRP 2170.0007
GLN 2180.0004
ARG 2190.0003
ASP 2200.0005
GLY 2210.0007
GLU 2220.0005
ASP 2230.0003
GLN 2240.0006
THR 2250.0007
GLN 2260.0012
ASP 2270.0013
THR 2280.0012
GLU 2290.0016
LEU 2300.0016
VAL 2310.0020
GLU 2320.0020
THR 2330.0020
ARG 2340.0025
PRO 2350.0028
ALA 2360.0033
GLY 2370.0035
ASP 2380.0037
GLY 2390.0032
THR 2400.0030
PHE 2410.0026
GLN 2420.0025
LYS 2430.0021
TRP 2440.0019
ALA 2450.0015
ALA 2460.0016
VAL 2470.0014
VAL 2480.0017
VAL 2490.0014
PRO 2500.0015
SER 2510.0017
GLY 2520.0013
GLN 2530.0009
GLU 2540.0012
GLN 2550.0011
ARG 2560.0006
TYR 2570.0008
THR 2580.0010
CYS 2590.0012
HIS 2600.0012
VAL 2610.0015
GLN 2620.0015
HIS 2630.0018
GLU 2640.0021
GLY 2650.0026
LEU 2660.0025
PRO 2670.0027
LYS 2680.0024
PRO 2690.0019
LEU 2700.0019
THR 2710.0017
LEU 2720.0018
ARG 2730.0016
TRP 2740.0016
GLU 2750.0017
PRO 2760.0020
GLN 2780.0034
ARG 2790.0030
THR 2800.0033
PRO 2810.0031
LYS 2820.0029
ILE 2830.0032
GLN 2840.0032
VAL 2850.0037
TYR 2860.0036
SER 2870.0039
ARG 2880.0038
HIS 2890.0040
PRO 2900.0039
ALA 2910.0043
GLU 2920.0048
ASN 2930.0052
GLY 2940.0056
LYS 2950.0054
SER 2960.0053
ASN 2970.0047
PHE 2980.0045
LEU 2990.0043
ASN 3000.0039
CYS 3010.0037
TYR 3020.0032
VAL 3030.0031
SER 3040.0026
GLY 3050.0024
PHE 3060.0028
HIS 3070.0030
PRO 3080.0032
SER 3090.0033
ASP 3100.0038
ILE 3110.0039
GLU 3120.0044
VAL 3130.0043
ASP 3140.0047
LEU 3150.0047
LEU 3160.0051
LYS 3170.0054
ASN 3180.0056
GLY 3190.0056
GLU 3200.0058
ARG 3210.0056
ILE 3220.0055
GLU 3230.0056
LYS 3240.0054
VAL 3250.0049
GLU 3260.0045
HIS 3270.0039
SER 3280.0035
ASP 3290.0032
LEU 3300.0030
SER 3310.0024
PHE 3320.0021
SER 3330.0016
LYS 3340.0012
ASP 3350.0016
TRP 3360.0019
SER 3370.0022
PHE 3380.0025
TYR 3390.0027
LEU 3400.0031
LEU 3410.0034
TYR 3420.0039
TYR 3430.0042
THR 3440.0047
GLU 3450.0050
PHE 3460.0052
THR 3470.0053
PRO 3480.0051
THR 3490.0054
GLU 3500.0053
LYS 3510.0056
ASP 3520.0055
GLU 3530.0051
TYR 3540.0048
ALA 3550.0046
CYS 3560.0043
ARG 3570.0046
VAL 3580.0042
ASN 3590.0044
HIS 3600.0041
VAL 3610.0042
THR 3620.0040
LEU 3630.0043
SER 3640.0048
GLN 3650.0049
PRO 3660.0047
LYS 3670.0043
ILE 3680.0044
VAL 3690.0041
LYS 3700.0042
TRP 3710.0041
ASP 3720.0038
ARG 3730.0038
ASP 3740.0036
MET 3750.0031
SER 10.0022
GLN 20.0017
PHE 30.0015
ARG 40.0014
VAL 50.0017
SER 60.0018
PRO 70.0022
LEU 80.0025
ASP 90.0026
ARG 100.0030
THR 110.0034
TRP 120.0036
ASN 130.0041
LEU 140.0044
GLY 150.0042
GLU 160.0038
THR 170.0033
VAL 180.0030
GLU 190.0024
LEU 200.0021
LYS 210.0016
CYS 220.0013
GLN 230.0009
VAL 240.0009
LEU 250.0011
LEU 260.0012
SER 270.0012
ASN 280.0012
PRO 290.0008
THR 300.0007
SER 310.0006
GLY 320.0007
CYS 330.0011
SER 340.0016
TRP 350.0020
LEU 360.0025
PHE 370.0030
GLN 380.0034
PRO 390.0039
ARG 400.0042
GLY 410.0046
ALA 420.0047
ALA 430.0044
ALA 440.0041
SER 450.0037
PRO 460.0032
THR 470.0031
PHE 480.0026
LEU 490.0026
LEU 500.0021
TYR 510.0016
LEU 520.0013
SER 530.0009
GLN 540.0010
ASN 550.0014
LYS 560.0018
PRO 570.0018
LYS 580.0020
ALA 590.0024
ALA 600.0027
GLU 610.0030
GLY 620.0035
LEU 630.0033
ASP 640.0036
THR 650.0032
GLN 660.0036
ARG 670.0035
PHE 680.0030
SER 690.0026
GLY 700.0020
LYS 710.0017
ARG 720.0012
LEU 730.0010
GLY 740.0006
ASP 750.0003
THR 760.0007
PHE 770.0012
VAL 780.0016
LEU 790.0021
THR 800.0026
LEU 810.0031
SER 820.0035
ASP 830.0040
PHE 840.0039
ARG 850.0043
ARG 860.0045
GLU 870.0043
ASN 880.0038
GLU 890.0039
GLY 900.0036
TYR 910.0032
TYR 920.0027
PHE 930.0023
CYS 940.0018
SER 950.0017
ALA 960.0013
LEU 970.0013
SER 980.0014
ASN 990.0017
SER 1000.0017
ILE 1010.0020
MET 1020.0019
TYR 1030.0019
PHE 1040.0021
SER 1050.0021
HIS 1060.0025
PHE 1070.0027
VAL 1080.0026
PRO 1090.0031
VAL 1100.0033
PHE 1110.0038
LEU 1120.0041
PRO 1130.0042
ALA 1140.0046
SER 10.0036
GLN 20.0032
PHE 30.0034
ARG 40.0039
VAL 50.0041
SER 60.0045
PRO 70.0049
LEU 80.0050
ASP 90.0056
ARG 100.0056
THR 110.0057
TRP 120.0057
ASN 130.0060
LEU 140.0060
GLY 150.0059
GLU 160.0057
THR 170.0053
VAL 180.0049
GLU 190.0046
LEU 200.0043
LYS 210.0039
CYS 220.0036
GLN 230.0034
VAL 240.0029
LEU 250.0030
LEU 260.0026
SER 270.0025
ASN 280.0020
PRO 290.0020
THR 300.0017
SER 310.0015
GLY 320.0019
CYS 330.0024
SER 340.0026
TRP 350.0031
LEU 360.0031
PHE 370.0035
GLN 380.0037
PRO 390.0041
ARG 400.0045
GLY 410.0044
ALA 420.0042
ALA 430.0036
ALA 440.0036
SER 450.0031
PRO 460.0030
THR 470.0030
PHE 480.0028
LEU 490.0031
LEU 500.0029
TYR 510.0025
LEU 520.0025
SER 530.0021
GLN 540.0020
ASN 550.0022
LYS 560.0027
PRO 570.0028
LYS 580.0026
ALA 590.0030
ALA 600.0029
GLU 610.0030
GLY 620.0035
LEU 630.0037
ASP 640.0042
THR 650.0040
GLN 660.0046
ARG 670.0046
PHE 680.0041
SER 690.0038
GLY 700.0035
LYS 710.0033
ARG 720.0030
LEU 730.0032
GLY 740.0028
ASP 750.0028
THR 760.0032
PHE 770.0032
VAL 780.0037
LEU 790.0038
THR 800.0043
LEU 810.0045
SER 820.0050
ASP 830.0054
PHE 840.0053
ARG 850.0053
ARG 860.0053
GLU 870.0048
ASN 880.0046
GLU 890.0048
GLY 900.0045
TYR 910.0042
TYR 920.0039
PHE 930.0035
CYS 940.0031
SER 950.0026
ALA 960.0022
LEU 970.0018
SER 980.0017
ASN 990.0014
SER 1000.0014
ILE 1010.0019
MET 1020.0021
TYR 1030.0026
PHE 1040.0030
SER 1050.0034
HIS 1060.0039
PHE 1070.0041
VAL 1080.0044
PRO 1090.0048
VAL 1100.0049
PHE 1110.0053
LEU 1120.0058
PRO 1130.0062
ALA 1140.0064

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.