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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0708
MET 10.0021
SER 20.0015
THR 30.0020
ILE 40.0016
THR 50.0017
LYS 60.0016
ASP 70.0017
GLN 80.0014
ILE 90.0010
LEU 100.0012
GLU 110.0006
GLY 120.0015
VAL 130.0014
ALA 140.0005
ALA 150.0007
LEU 160.0009
SER 170.0035
VAL 180.0048
MET 190.0044
GLU 200.0017
ILE 210.0020
VAL 220.0030
GLU 230.0007
LEU 240.0031
ILE 250.0046
SER 260.0016
ALA 270.0045
MET 280.0063
GLU 290.0037
GLU 300.0022
LYS 310.0059
PHE 320.0056
GLY 330.0037
VAL 340.0081
SER 350.0095
ALA 360.0135
ALA 370.0139
ALA 380.0076
VAL 390.0059
ALA 400.0103
ALA 410.0093
GLY 420.0113
PRO 430.0119
ALA 440.0132
ALA 450.0106
ALA 460.0190
VAL 470.0157
GLU 480.0363
ALA 490.0426
ALA 500.0248
GLU 510.0184
GLU 520.0159
GLN 530.0127
THR 540.0111
GLU 550.0092
PHE 560.0080
ASP 570.0089
VAL 580.0078
VAL 590.0089
LEU 600.0085
ALA 610.0101
SER 620.0110
PHE 630.0093
GLY 640.0109
GLU 650.0125
ASN 660.0082
LYS 670.0076
VAL 680.0047
ALA 690.0039
VAL 700.0042
ILE 710.0069
LYS 720.0074
ALA 730.0067
VAL 740.0085
ARG 750.0127
GLY 760.0135
ALA 770.0120
THR 780.0153
GLY 790.0191
LEU 800.0194
GLY 810.0197
LEU 820.0152
LYS 830.0182
GLU 840.0191
ALA 850.0133
LYS 860.0125
ASP 870.0155
LEU 880.0135
VAL 890.0113
GLU 900.0145
SER 910.0121
ALA 920.0116
PRO 930.0115
ALA 940.0114
VAL 950.0112
LEU 960.0104
LYS 970.0109
GLU 980.0124
GLY 990.0119
VAL 1000.0094
ASN 1010.0086
LYS 1020.0049
ASP 1030.0056
GLU 1040.0073
ALA 1050.0049
GLU 1060.0036
THR 1070.0061
LEU 1080.0050
LYS 1090.0029
LYS 1100.0051
SER 1110.0061
LEU 1120.0033
GLU 1130.0062
GLU 1140.0081
ALA 1150.0055
GLY 1160.0080
ALA 1170.0070
SER 1180.0078
VAL 1190.0064
GLU 1200.0071
ILE 1210.0077
LYS 1220.0069
GLU 1230.0070
ALA 1240.0068
ALA 1250.0072
ALA 1260.0072
LYS 1270.0084
ALA 1280.0093
TYR 1290.0105
LYS 1300.0118
ILE 1310.0128
ILE 1320.0132
SER 1330.0109
LEU 1340.0108
LYS 1350.0090
TYR 1360.0046
THR 1370.0010
ARG 1380.0028
LYS 1390.0057
VAL 1400.0091
CYS 1410.0121
ILE 1420.0111
GLY 1430.0126
PRO 1440.0102
GLY 1450.0116
PRO 1460.0061
GLY 1470.0138
LYS 1480.0134
ALA 1490.0134
TYR 1500.0043
LYS 1510.0038
ILE 1520.0029
ILE 1530.0019
SER 1540.0032
LEU 1550.0041
LYS 1560.0031
TYR 1570.0028
THR 1580.0008
ARG 1590.0028
LYS 1600.0026
VAL 1610.0061
CYS 1620.0087
GLY 1630.0147
PRO 1640.0140
GLY 1650.0117
PRO 1660.0117
GLY 1670.0102
GLY 1680.0193
LYS 1690.0156
ALA 1700.0129
TYR 1710.0080
LYS 1720.0085
ILE 1730.0074
ILE 1740.0084
SER 1750.0092
LEU 1760.0074
LYS 1770.0057
TYR 1780.0038
THR 1790.0024
ARG 1800.0022
LYS 1810.0068
VAL 1820.0097
GLY 1830.0135
PRO 1840.0145
GLY 1850.0124
PRO 1860.0095
GLY 1870.0065
ILE 1880.0070
ILE 1890.0044
SER 1900.0048
LEU 1910.0019
LYS 1920.0011
TYR 1930.0031
THR 1940.0051
ARG 1950.0078
LYS 1960.0105
VAL 1970.0114
CYS 1980.0105
ILE 1990.0124
GLN 2000.0115
LEU 2010.0111
GLY 2020.0109
GLY 2030.0102
PRO 2040.0092
GLY 2050.0090
PRO 2060.0075
GLY 2070.0066
ASN 2080.0058
ILE 2090.0049
LYS 2100.0043
THR 2110.0047
ALA 2120.0040
PHE 2130.0037
HIS 2140.0041
CYS 2150.0041
TYR 2160.0042
ALA 2170.0038
ALA 2180.0043
TYR 2190.0043
MET 2200.0037
THR 2210.0046
SER 2220.0046
ILE 2230.0060
LYS 2240.0061
ALA 2250.0085
CYS 2260.0332
ASP 2270.0306
LEU 2280.0097
LYS 2290.0130
LYS 2300.0191
PRO 2310.0180
LEU 2320.0054
MET 2330.0058
GLU 2340.0098
SER 2350.0148
GLY 2360.0050
TRP 2370.0015
SER 2380.0030
ASP 2390.0067
THR 2400.0101
ALA 2410.0311
HIS 2420.0181
GLY 2430.0160
LYS 2440.0081
LYS 2450.0100
SER 2460.0064
LEU 2470.0060
PRO 2480.0053
SER 2490.0052
SER 2500.0051
SER 2510.0057
SER 2520.0034
TYR 2530.0014
SER 2540.0046
TYR 2550.0061
ARG 2560.0069
ARG 2570.0067
LYS 2580.0055
LEU 2590.0050
THR 2600.0042
ASN 2610.0026
PRO 2620.0012
ALA 2630.0012
ASN 2640.0017
LYS 2650.0015
GLU 2660.0033
GLU 2670.0024
SER 2680.0027
ILE 2690.0037
LYS 2700.0043
LYS 2710.0052
GLN 2720.0064
LYS 2730.0038
TYR 2740.0048
SER 2750.0030
TYR 2760.0027
PRO 2770.0013
TRP 2780.0014
GLN 2790.0021
THR 2800.0011
SER 2810.0027
LYS 2820.0010
CYS 2830.0010
PHE 2840.0015
ASP 2880.0003
TYR 2890.0007
GLN 2900.0009
TYR 2910.0017
CYS 2970.0708
ASN 2980.0687
PRO 2990.0434
GLY 3000.0301
LYS 3010.0254
LYS 3020.0253
ASN 3030.0124
THR 3040.0341
ILE 3050.0198
SER 3060.0317
GLY 3070.0436
TYR 3080.0416
LYS 3090.0199
ARG 3100.0182
MET 3110.0284
MET 3120.0114
ALA 3130.0242
THR 3140.0365
LYS 3150.0231
ASP 3160.0420
SER 3170.0557
PHE 3180.0378
GLN 3190.0322
SER 3200.0100
PHE 3210.0068
ASN 3220.0098
LEU 3230.0095
THR 3240.0087
GLU 3250.0087
PRO 3260.0094
HIS 3270.0132
ILE 3280.0152
THR 3290.0181
THR 3300.0208
ASN 3310.0236
LYS 3320.0200
LEU 3330.0170
GLU 3340.0154
TRP 3350.0125
ILE 3360.0107
ASP 3370.0081
PRO 3380.0133
ASP 3390.0142
GLY 3400.0122
ASN 3410.0120
THR 3420.0048
ARG 3430.0134
GLY 3440.0108
GLY 3450.0148
GLY 3460.0084
GLY 10.0097
SER 20.0084
HIS 30.0071
SER 40.0060
MET 50.0050
ARG 60.0056
TYR 70.0058
PHE 80.0070
PHE 90.0073
THR 100.0086
SER 110.0089
VAL 120.0106
SER 130.0112
ARG 140.0141
PRO 150.0145
GLY 160.0206
ARG 170.0201
GLY 180.0182
GLU 190.0151
PRO 200.0132
ARG 210.0130
PHE 220.0109
ILE 230.0103
ALA 240.0083
VAL 250.0082
GLY 260.0059
TYR 270.0062
VAL 280.0062
ASP 290.0068
ASP 300.0076
THR 310.0098
GLN 320.0090
PHE 330.0075
VAL 340.0074
ARG 350.0090
PHE 360.0110
ASP 370.0134
SER 380.0143
ASP 390.0172
ALA 400.0176
ALA 410.0209
SER 420.0183
GLN 430.0166
ARG 440.0137
MET 450.0106
GLU 460.0106
PRO 470.0095
ARG 480.0112
ALA 490.0106
PRO 500.0103
TRP 510.0087
ILE 520.0069
GLU 530.0085
GLN 540.0069
GLU 550.0048
GLY 560.0057
PRO 570.0089
GLU 580.0083
TYR 590.0060
TRP 600.0087
ASP 610.0111
GLY 620.0089
GLU 630.0078
THR 640.0110
ARG 650.0113
LYS 660.0084
VAL 670.0089
LYS 680.0114
ALA 690.0098
HIS 700.0078
SER 710.0096
GLN 720.0100
THR 730.0081
HIS 740.0083
ARG 750.0103
VAL 760.0095
ASP 770.0084
LEU 780.0097
GLY 790.0103
THR 800.0090
LEU 810.0084
ARG 820.0097
GLY 830.0098
TYR 840.0088
TYR 850.0094
ASN 860.0112
GLN 870.0105
SER 880.0098
GLU 890.0098
ALA 900.0096
GLY 910.0116
SER 920.0111
HIS 930.0098
THR 940.0091
VAL 950.0079
GLN 960.0072
ARG 970.0059
MET 980.0055
TYR 990.0042
GLY 1000.0040
CYS 1010.0040
ASP 1020.0056
VAL 1030.0066
GLY 1040.0084
SER 1050.0099
ASP 1060.0103
TRP 1070.0082
ARG 1080.0075
PHE 1090.0059
LEU 1100.0064
ARG 1110.0047
GLY 1120.0034
TYR 1130.0033
HIS 1140.0034
GLN 1150.0047
TYR 1160.0057
ALA 1170.0067
TYR 1180.0075
ASP 1190.0087
GLY 1200.0086
LYS 1210.0071
ASP 1220.0059
TYR 1230.0055
ILE 1240.0045
ALA 1250.0038
LEU 1260.0020
LYS 1270.0021
GLU 1280.0033
ASP 1290.0035
LEU 1300.0025
ARG 1310.0034
SER 1320.0027
TRP 1330.0025
THR 1340.0027
ALA 1350.0041
ALA 1360.0045
ASP 1370.0050
MET 1380.0053
ALA 1390.0061
ALA 1400.0053
GLN 1410.0052
THR 1420.0065
THR 1430.0060
LYS 1440.0046
HIS 1450.0056
LYS 1460.0072
TRP 1470.0057
GLU 1480.0056
ALA 1490.0076
ALA 1500.0074
HIS 1510.0067
VAL 1520.0054
ALA 1530.0039
GLU 1540.0050
GLN 1550.0049
LEU 1560.0029
ARG 1570.0031
ALA 1580.0040
TYR 1590.0024
LEU 1600.0023
GLU 1610.0037
GLY 1620.0040
THR 1630.0026
CYS 1640.0023
VAL 1650.0040
GLU 1660.0039
TRP 1670.0026
LEU 1680.0044
ARG 1690.0059
ARG 1700.0048
TYR 1710.0056
LEU 1720.0074
GLU 1730.0083
ASN 1740.0078
GLY 1750.0091
LYS 1760.0104
GLU 1770.0119
THR 1780.0106
LEU 1790.0082
GLN 1800.0083
ARG 1810.0065
THR 1820.0063
ASP 1830.0062
ALA 1840.0060
PRO 1850.0061
LYS 1860.0079
THR 1870.0077
HIS 1880.0072
MET 1890.0071
THR 1900.0068
HIS 1910.0092
HIS 1920.0088
ALA 1930.0107
VAL 1940.0101
SER 1950.0126
ASP 1960.0148
HIS 1970.0137
GLU 1980.0112
ALA 1990.0102
THR 2000.0082
LEU 2010.0072
ARG 2020.0065
CYS 2030.0069
TRP 2040.0066
ALA 2050.0072
LEU 2060.0079
SER 2070.0076
PHE 2080.0073
TYR 2090.0068
PRO 2100.0066
ALA 2110.0070
GLU 2120.0068
ILE 2130.0059
THR 2140.0057
LEU 2150.0050
THR 2160.0059
TRP 2170.0064
GLN 2180.0077
ARG 2190.0087
ASP 2200.0104
GLY 2210.0099
GLU 2220.0072
ASP 2230.0052
GLN 2240.0033
THR 2250.0014
GLN 2260.0015
ASP 2270.0018
THR 2280.0020
GLU 2290.0026
LEU 2300.0025
VAL 2310.0050
GLU 2320.0049
THR 2330.0056
ARG 2340.0046
PRO 2350.0050
ALA 2360.0055
GLY 2370.0056
ASP 2380.0070
GLY 2390.0073
THR 2400.0073
PHE 2410.0063
GLN 2420.0057
LYS 2430.0056
TRP 2440.0054
ALA 2450.0056
ALA 2460.0052
VAL 2470.0062
VAL 2480.0072
VAL 2490.0087
PRO 2500.0104
SER 2510.0128
GLY 2520.0140
GLN 2530.0128
GLU 2540.0119
GLN 2550.0131
ARG 2560.0114
TYR 2570.0097
THR 2580.0095
CYS 2590.0082
HIS 2600.0084
VAL 2610.0065
GLN 2620.0071
HIS 2630.0071
GLU 2640.0075
GLY 2650.0066
LEU 2660.0089
PRO 2670.0097
LYS 2680.0100
PRO 2690.0099
LEU 2700.0086
THR 2710.0109
LEU 2720.0104
ARG 2730.0114
TRP 2740.0109
GLU 2750.0130
PRO 2760.0155
GLN 2780.0082
ARG 2790.0072
THR 2800.0058
PRO 2810.0046
LYS 2820.0044
ILE 2830.0024
GLN 2840.0036
VAL 2850.0047
TYR 2860.0073
SER 2870.0093
ARG 2880.0101
HIS 2890.0155
PRO 2900.0187
ALA 2910.0193
GLU 2920.0246
ASN 2930.0269
GLY 2940.0296
LYS 2950.0273
SER 2960.0233
ASN 2970.0179
PHE 2980.0118
LEU 2990.0097
ASN 3000.0065
CYS 3010.0036
TYR 3020.0025
VAL 3030.0035
SER 3040.0051
GLY 3050.0068
PHE 3060.0068
HIS 3070.0079
PRO 3080.0097
SER 3090.0086
ASP 3100.0076
ILE 3110.0049
GLU 3120.0039
VAL 3130.0060
ASP 3140.0082
LEU 3150.0092
LEU 3160.0130
LYS 3170.0171
ASN 3180.0201
GLY 3190.0176
GLU 3200.0197
ARG 3210.0172
ILE 3220.0168
GLU 3230.0189
LYS 3240.0167
VAL 3250.0110
GLU 3260.0069
HIS 3270.0022
SER 3280.0080
ASP 3290.0083
LEU 3300.0081
SER 3310.0083
PHE 3320.0081
SER 3330.0062
LYS 3340.0060
ASP 3350.0063
TRP 3360.0063
SER 3370.0066
PHE 3380.0074
TYR 3390.0055
LEU 3400.0033
LEU 3410.0019
TYR 3420.0017
TYR 3430.0066
THR 3440.0114
GLU 3450.0154
PHE 3460.0183
THR 3470.0222
PRO 3480.0215
THR 3490.0254
GLU 3500.0272
LYS 3510.0272
ASP 3520.0237
GLU 3530.0169
TYR 3540.0134
ALA 3550.0096
CYS 3560.0061
ARG 3570.0067
VAL 3580.0028
ASN 3590.0042
HIS 3600.0051
VAL 3610.0059
THR 3620.0046
LEU 3630.0025
SER 3640.0027
GLN 3650.0039
PRO 3660.0041
LYS 3670.0024
ILE 3680.0044
VAL 3690.0042
LYS 3700.0064
TRP 3710.0087
ASP 3720.0093
ARG 3730.0106
ASP 3740.0099
MET 3750.0087
SER 10.0017
GLN 20.0025
PHE 30.0027
ARG 40.0024
VAL 50.0028
SER 60.0031
PRO 70.0033
LEU 80.0032
ASP 90.0041
ARG 100.0043
THR 110.0049
TRP 120.0054
ASN 130.0066
LEU 140.0072
GLY 150.0069
GLU 160.0059
THR 170.0047
VAL 180.0041
GLU 190.0033
LEU 200.0033
LYS 210.0028
CYS 220.0025
GLN 230.0025
VAL 240.0031
LEU 250.0033
LEU 260.0015
SER 270.0022
ASN 280.0022
PRO 290.0013
THR 300.0014
SER 310.0035
GLY 320.0038
CYS 330.0037
SER 340.0042
TRP 350.0043
LEU 360.0050
PHE 370.0050
GLN 380.0053
PRO 390.0054
ARG 400.0054
GLY 410.0076
ALA 420.0072
ALA 430.0069
ALA 440.0068
SER 450.0066
PRO 460.0057
THR 470.0059
PHE 480.0058
LEU 490.0057
LEU 500.0056
TYR 510.0044
LEU 520.0040
SER 530.0039
GLN 540.0040
ASN 550.0047
LYS 560.0060
PRO 570.0056
LYS 580.0063
ALA 590.0064
ALA 600.0070
GLU 610.0094
GLY 620.0096
LEU 630.0081
ASP 640.0077
THR 650.0068
GLN 660.0057
ARG 670.0052
PHE 680.0053
SER 690.0046
GLY 700.0041
LYS 710.0037
ARG 720.0033
LEU 730.0030
GLY 740.0028
ASP 750.0022
THR 760.0022
PHE 770.0028
VAL 780.0031
LEU 790.0037
THR 800.0041
LEU 810.0041
SER 820.0045
ASP 830.0057
PHE 840.0058
ARG 850.0070
ARG 860.0071
GLU 870.0070
ASN 880.0050
GLU 890.0054
GLY 900.0058
TYR 910.0043
TYR 920.0041
PHE 930.0040
CYS 940.0042
SER 950.0047
ALA 960.0026
LEU 970.0018
SER 980.0006
ASN 990.0003
SER 1000.0011
ILE 1010.0021
MET 1020.0029
TYR 1030.0028
PHE 1040.0033
SER 1050.0034
HIS 1060.0035
PHE 1070.0036
VAL 1080.0033
PRO 1090.0038
VAL 1100.0043
PHE 1110.0056
LEU 1120.0063
PRO 1130.0064
ALA 1140.0070
SER 10.0056
GLN 20.0054
PHE 30.0051
ARG 40.0049
VAL 50.0049
SER 60.0040
PRO 70.0042
LEU 80.0044
ASP 90.0046
ARG 100.0054
THR 110.0060
TRP 120.0066
ASN 130.0077
LEU 140.0085
GLY 150.0081
GLU 160.0067
THR 170.0058
VAL 180.0054
GLU 190.0043
LEU 200.0041
LYS 210.0041
CYS 220.0044
GLN 230.0042
VAL 240.0045
LEU 250.0046
LEU 260.0053
SER 270.0056
ASN 280.0050
PRO 290.0042
THR 300.0036
SER 310.0038
GLY 320.0035
CYS 330.0036
SER 340.0039
TRP 350.0039
LEU 360.0053
PHE 370.0055
GLN 380.0056
PRO 390.0058
ARG 400.0057
GLY 410.0053
ALA 420.0051
ALA 430.0046
ALA 440.0045
SER 450.0046
PRO 460.0045
THR 470.0042
PHE 480.0039
LEU 490.0035
LEU 500.0031
TYR 510.0018
LEU 520.0009
SER 530.0015
GLN 540.0026
ASN 550.0026
LYS 560.0006
PRO 570.0008
LYS 580.0015
ALA 590.0023
ALA 600.0034
GLU 610.0041
GLY 620.0040
LEU 630.0044
ASP 640.0052
THR 650.0061
GLN 660.0062
ARG 670.0058
PHE 680.0053
SER 690.0045
GLY 700.0038
LYS 710.0028
ARG 720.0029
LEU 730.0030
GLY 740.0032
ASP 750.0033
THR 760.0031
PHE 770.0036
VAL 780.0036
LEU 790.0041
THR 800.0041
LEU 810.0057
SER 820.0059
ASP 830.0071
PHE 840.0073
ARG 850.0087
ARG 860.0092
GLU 870.0094
ASN 880.0078
GLU 890.0073
GLY 900.0065
TYR 910.0056
TYR 920.0054
PHE 930.0052
CYS 940.0051
SER 950.0053
ALA 960.0049
LEU 970.0049
SER 980.0049
ASN 990.0049
SER 1000.0049
ILE 1010.0056
MET 1020.0055
TYR 1030.0056
PHE 1040.0056
SER 1050.0056
HIS 1060.0053
PHE 1070.0055
VAL 1080.0052
PRO 1090.0056
VAL 1100.0058
PHE 1110.0067
LEU 1120.0075
PRO 1130.0073
ALA 1140.0078

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.