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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1242
MET 10.0009
SER 20.0008
THR 30.0013
ILE 40.0008
THR 50.0012
LYS 60.0012
ASP 70.0010
GLN 80.0008
ILE 90.0010
LEU 100.0010
GLU 110.0008
GLY 120.0013
VAL 130.0014
ALA 140.0009
ALA 150.0012
LEU 160.0008
SER 170.0008
VAL 180.0015
MET 190.0013
GLU 200.0005
ILE 210.0011
VAL 220.0012
GLU 230.0004
LEU 240.0016
ILE 250.0021
SER 260.0010
ALA 270.0018
MET 280.0028
GLU 290.0023
GLU 300.0017
LYS 310.0029
PHE 320.0034
GLY 330.0027
VAL 340.0035
SER 350.0033
ALA 360.0047
ALA 370.0038
ALA 380.0011
VAL 390.0023
ALA 400.0036
ALA 410.0034
GLY 420.0042
PRO 430.0048
ALA 440.0088
ALA 450.0084
ALA 460.0126
VAL 470.0073
GLU 480.0238
ALA 490.0303
ALA 500.0210
GLU 510.0093
GLU 520.0064
GLN 530.0031
THR 540.0012
GLU 550.0043
PHE 560.0034
ASP 570.0034
VAL 580.0035
VAL 590.0033
LEU 600.0034
ALA 610.0040
SER 620.0032
PHE 630.0029
GLY 640.0043
GLU 650.0050
ASN 660.0051
LYS 670.0037
VAL 680.0044
ALA 690.0049
VAL 700.0037
ILE 710.0029
LYS 720.0043
ALA 730.0046
VAL 740.0028
ARG 750.0020
GLY 760.0037
ALA 770.0042
THR 780.0029
GLY 790.0014
LEU 800.0009
GLY 810.0030
LEU 820.0039
LYS 830.0047
GLU 840.0033
ALA 850.0009
LYS 860.0019
ASP 870.0023
LEU 880.0016
VAL 890.0008
GLU 900.0005
SER 910.0019
ALA 920.0021
PRO 930.0027
ALA 940.0028
VAL 950.0034
LEU 960.0038
LYS 970.0044
GLU 980.0044
GLY 990.0048
VAL 1000.0050
ASN 1010.0050
LYS 1020.0046
ASP 1030.0052
GLU 1040.0052
ALA 1050.0045
GLU 1060.0053
THR 1070.0049
LEU 1080.0043
LYS 1090.0047
LYS 1100.0050
SER 1110.0048
LEU 1120.0043
GLU 1130.0055
GLU 1140.0058
ALA 1150.0049
GLY 1160.0047
ALA 1170.0038
SER 1180.0042
VAL 1190.0043
GLU 1200.0050
ILE 1210.0030
LYS 1220.0029
GLU 1230.0027
ALA 1240.0030
ALA 1250.0031
ALA 1260.0018
LYS 1270.0022
ALA 1280.0027
TYR 1290.0031
LYS 1300.0038
ILE 1310.0044
ILE 1320.0063
SER 1330.0058
LEU 1340.0071
LYS 1350.0071
TYR 1360.0072
THR 1370.0056
ARG 1380.0047
LYS 1390.0038
VAL 1400.0029
CYS 1410.0050
ILE 1420.0068
GLY 1430.0096
PRO 1440.0109
GLY 1450.0143
PRO 1460.0121
GLY 1470.0067
LYS 1480.0048
ALA 1490.0099
TYR 1500.0061
LYS 1510.0074
ILE 1520.0051
ILE 1530.0038
SER 1540.0025
LEU 1550.0028
LYS 1560.0032
TYR 1570.0038
THR 1580.0035
ARG 1590.0039
LYS 1600.0041
VAL 1610.0037
CYS 1620.0054
GLY 1630.0077
PRO 1640.0085
GLY 1650.0093
PRO 1660.0147
GLY 1670.0112
GLY 1680.0154
LYS 1690.0104
ALA 1700.0078
TYR 1710.0093
LYS 1720.0091
ILE 1730.0097
ILE 1740.0100
SER 1750.0110
LEU 1760.0070
LYS 1770.0039
TYR 1780.0031
THR 1790.0034
ARG 1800.0066
LYS 1810.0105
VAL 1820.0126
GLY 1830.0142
PRO 1840.0134
GLY 1850.0108
PRO 1860.0083
GLY 1870.0055
ILE 1880.0037
ILE 1890.0008
SER 1900.0007
LEU 1910.0011
LYS 1920.0017
TYR 1930.0020
THR 1940.0020
ARG 1950.0029
LYS 1960.0030
VAL 1970.0038
CYS 1980.0028
ILE 1990.0045
GLN 2000.0037
LEU 2010.0023
GLY 2020.0016
GLY 2030.0011
PRO 2040.0018
GLY 2050.0021
PRO 2060.0015
GLY 2070.0015
ASN 2080.0012
ILE 2090.0013
LYS 2100.0019
THR 2110.0030
ALA 2120.0027
PHE 2130.0028
HIS 2140.0036
CYS 2150.0038
TYR 2160.0048
ALA 2170.0035
ALA 2180.0032
TYR 2190.0045
MET 2200.0045
THR 2210.0039
SER 2220.0038
ILE 2230.0034
LYS 2240.0036
ALA 2250.0034
CYS 2260.0110
ASP 2270.0086
LEU 2280.0043
LYS 2290.0048
LYS 2300.0053
PRO 2310.0058
LEU 2320.0053
MET 2330.0026
GLU 2340.0025
SER 2350.0014
GLY 2360.0024
TRP 2370.0029
SER 2380.0035
ASP 2390.0045
THR 2400.0053
ALA 2410.0117
HIS 2420.0073
GLY 2430.0060
LYS 2440.0018
LYS 2450.0026
SER 2460.0035
LEU 2470.0023
PRO 2480.0005
SER 2490.0016
SER 2500.0020
SER 2510.0018
SER 2520.0019
TYR 2530.0023
SER 2540.0022
TYR 2550.0029
ARG 2560.0032
ARG 2570.0034
LYS 2580.0033
LEU 2590.0036
THR 2600.0036
ASN 2610.0043
PRO 2620.0045
ALA 2630.0047
ASN 2640.0043
LYS 2650.0042
GLU 2660.0043
GLU 2670.0038
SER 2680.0023
ILE 2690.0023
LYS 2700.0011
LYS 2710.0018
GLN 2720.0025
LYS 2730.0015
TYR 2740.0023
SER 2750.0016
TYR 2760.0017
PRO 2770.0023
TRP 2780.0026
GLN 2790.0030
THR 2800.0019
SER 2810.0025
LYS 2820.0016
CYS 2830.0018
PHE 2840.0022
ASP 2880.0020
TYR 2890.0011
GLN 2900.0012
TYR 2910.0030
CYS 2970.1242
ASN 2980.0397
PRO 2990.1040
GLY 3000.0731
LYS 3010.0390
LYS 3020.0779
ASN 3030.0462
THR 3040.0413
ILE 3050.0189
SER 3060.0213
GLY 3070.0347
TYR 3080.0510
LYS 3090.0507
ARG 3100.0367
MET 3110.0428
MET 3120.0551
ALA 3130.0572
THR 3140.0405
LYS 3150.0396
ASP 3160.0364
SER 3170.0228
PHE 3180.0115
GLN 3190.0057
SER 3200.0022
PHE 3210.0120
ASN 3220.0127
LEU 3230.0120
THR 3240.0127
GLU 3250.0124
PRO 3260.0117
HIS 3270.0188
ILE 3280.0283
THR 3290.0369
THR 3300.0488
ASN 3310.0518
LYS 3320.0401
LEU 3330.0303
GLU 3340.0237
TRP 3350.0158
ILE 3360.0159
ASP 3370.0118
PRO 3380.0109
ASP 3390.0119
GLY 3400.0109
ASN 3410.0124
THR 3420.0131
ARG 3430.0100
GLY 3440.0078
GLY 3450.0107
GLY 3460.0086
GLY 10.0050
SER 20.0052
HIS 30.0041
SER 40.0039
MET 50.0029
ARG 60.0028
TYR 70.0025
PHE 80.0027
PHE 90.0026
THR 100.0027
SER 110.0032
VAL 120.0035
SER 130.0041
ARG 140.0045
PRO 150.0051
GLY 160.0067
ARG 170.0058
GLY 180.0049
GLU 190.0044
PRO 200.0039
ARG 210.0030
PHE 220.0026
ILE 230.0024
ALA 240.0021
VAL 250.0018
GLY 260.0016
TYR 270.0019
VAL 280.0019
ASP 290.0027
ASP 300.0031
THR 310.0024
GLN 320.0020
PHE 330.0011
VAL 340.0008
ARG 350.0010
PHE 360.0008
ASP 370.0015
SER 380.0013
ASP 390.0020
ALA 400.0018
ALA 410.0029
SER 420.0028
GLN 430.0016
ARG 440.0019
MET 450.0013
GLU 460.0016
PRO 470.0017
ARG 480.0020
ALA 490.0022
PRO 500.0030
TRP 510.0023
ILE 520.0021
GLU 530.0036
GLN 540.0043
GLU 550.0041
GLY 560.0060
PRO 570.0063
GLU 580.0066
TYR 590.0050
TRP 600.0041
ASP 610.0045
GLY 620.0046
GLU 630.0031
THR 640.0025
ARG 650.0037
LYS 660.0030
VAL 670.0018
LYS 680.0016
ALA 690.0029
HIS 700.0031
SER 710.0027
GLN 720.0032
THR 730.0035
HIS 740.0034
ARG 750.0038
VAL 760.0038
ASP 770.0033
LEU 780.0032
GLY 790.0034
THR 800.0033
LEU 810.0027
ARG 820.0025
GLY 830.0031
TYR 840.0029
TYR 850.0025
ASN 860.0032
GLN 870.0023
SER 880.0023
GLU 890.0024
ALA 900.0016
GLY 910.0028
SER 920.0030
HIS 930.0028
THR 940.0029
VAL 950.0029
GLN 960.0026
ARG 970.0027
MET 980.0029
TYR 990.0031
GLY 1000.0033
CYS 1010.0046
ASP 1020.0053
VAL 1030.0057
GLY 1040.0066
SER 1050.0065
ASP 1060.0071
TRP 1070.0056
ARG 1080.0067
PHE 1090.0066
LEU 1100.0072
ARG 1110.0055
GLY 1120.0045
TYR 1130.0038
HIS 1140.0029
GLN 1150.0027
TYR 1160.0023
ALA 1170.0023
TYR 1180.0024
ASP 1190.0024
GLY 1200.0022
LYS 1210.0022
ASP 1220.0022
TYR 1230.0021
ILE 1240.0021
ALA 1250.0021
LEU 1260.0036
LYS 1270.0042
GLU 1280.0050
ASP 1290.0050
LEU 1300.0045
ARG 1310.0039
SER 1320.0031
TRP 1330.0026
THR 1340.0031
ALA 1350.0027
ALA 1360.0024
ASP 1370.0025
MET 1380.0029
ALA 1390.0026
ALA 1400.0024
GLN 1410.0029
THR 1420.0031
THR 1430.0025
LYS 1440.0022
HIS 1450.0027
LYS 1460.0028
TRP 1470.0024
GLU 1480.0022
ALA 1490.0027
ALA 1500.0032
HIS 1510.0030
VAL 1520.0029
ALA 1530.0033
GLU 1540.0041
GLN 1550.0045
LEU 1560.0038
ARG 1570.0049
ALA 1580.0053
TYR 1590.0046
LEU 1600.0048
GLU 1610.0061
GLY 1620.0059
THR 1630.0049
CYS 1640.0042
VAL 1650.0050
GLU 1660.0047
TRP 1670.0035
LEU 1680.0030
ARG 1690.0033
ARG 1700.0026
TYR 1710.0012
LEU 1720.0014
GLU 1730.0010
ASN 1740.0012
GLY 1750.0011
LYS 1760.0015
GLU 1770.0028
THR 1780.0029
LEU 1790.0024
GLN 1800.0027
ARG 1810.0043
THR 1820.0041
ASP 1830.0038
ALA 1840.0038
PRO 1850.0032
LYS 1860.0025
THR 1870.0020
HIS 1880.0017
MET 1890.0018
THR 1900.0020
HIS 1910.0031
HIS 1920.0046
ALA 1930.0066
VAL 1940.0077
SER 1950.0094
ASP 1960.0103
HIS 1970.0090
GLU 1980.0073
ALA 1990.0060
THR 2000.0047
LEU 2010.0031
ARG 2020.0027
CYS 2030.0020
TRP 2040.0018
ALA 2050.0019
LEU 2060.0024
SER 2070.0027
PHE 2080.0030
TYR 2090.0032
PRO 2100.0033
ALA 2110.0032
GLU 2120.0034
ILE 2130.0029
THR 2140.0027
LEU 2150.0022
THR 2160.0026
TRP 2170.0027
GLN 2180.0025
ARG 2190.0029
ASP 2200.0027
GLY 2210.0025
GLU 2220.0027
ASP 2230.0030
GLN 2240.0034
THR 2250.0036
GLN 2260.0039
ASP 2270.0039
THR 2280.0037
GLU 2290.0039
LEU 2300.0038
VAL 2310.0027
GLU 2320.0027
THR 2330.0028
ARG 2340.0023
PRO 2350.0024
ALA 2360.0024
GLY 2370.0022
ASP 2380.0027
GLY 2390.0027
THR 2400.0029
PHE 2410.0027
GLN 2420.0022
LYS 2430.0023
TRP 2440.0022
ALA 2450.0025
ALA 2460.0038
VAL 2470.0041
VAL 2480.0051
VAL 2490.0050
PRO 2500.0060
SER 2510.0068
GLY 2520.0067
GLN 2530.0057
GLU 2540.0048
GLN 2550.0046
ARG 2560.0037
TYR 2570.0032
THR 2580.0024
CYS 2590.0020
HIS 2600.0019
VAL 2610.0020
GLN 2620.0029
HIS 2630.0034
GLU 2640.0045
GLY 2650.0044
LEU 2660.0048
PRO 2670.0062
LYS 2680.0055
PRO 2690.0040
LEU 2700.0032
THR 2710.0023
LEU 2720.0023
ARG 2730.0028
TRP 2740.0033
GLU 2750.0041
PRO 2760.0045
GLN 2780.0024
ARG 2790.0020
THR 2800.0024
PRO 2810.0023
LYS 2820.0020
ILE 2830.0024
GLN 2840.0022
VAL 2850.0024
TYR 2860.0022
SER 2870.0020
ARG 2880.0026
HIS 2890.0035
PRO 2900.0045
ALA 2910.0045
GLU 2920.0052
ASN 2930.0056
GLY 2940.0044
LYS 2950.0039
SER 2960.0026
ASN 2970.0024
PHE 2980.0018
LEU 2990.0020
ASN 3000.0019
CYS 3010.0022
TYR 3020.0019
VAL 3030.0018
SER 3040.0015
GLY 3050.0016
PHE 3060.0021
HIS 3070.0025
PRO 3080.0032
SER 3090.0034
ASP 3100.0041
ILE 3110.0039
GLU 3120.0045
VAL 3130.0049
ASP 3140.0052
LEU 3150.0045
LEU 3160.0056
LYS 3170.0058
ASN 3180.0078
GLY 3190.0085
GLU 3200.0082
ARG 3210.0075
ILE 3220.0060
GLU 3230.0060
LYS 3240.0056
VAL 3250.0042
GLU 3260.0040
HIS 3270.0032
SER 3280.0023
ASP 3290.0023
LEU 3300.0025
SER 3310.0026
PHE 3320.0028
SER 3330.0002
LYS 3340.0010
ASP 3350.0006
TRP 3360.0014
SER 3370.0015
PHE 3380.0022
TYR 3390.0021
LEU 3400.0022
LEU 3410.0021
TYR 3420.0023
TYR 3430.0025
THR 3440.0027
GLU 3450.0023
PHE 3460.0022
THR 3470.0025
PRO 3480.0040
THR 3490.0054
GLU 3500.0076
LYS 3510.0085
ASP 3520.0071
GLU 3530.0060
TYR 3540.0049
ALA 3550.0049
CYS 3560.0043
ARG 3570.0054
VAL 3580.0041
ASN 3590.0043
HIS 3600.0041
VAL 3610.0042
THR 3620.0040
LEU 3630.0041
SER 3640.0041
GLN 3650.0040
PRO 3660.0041
LYS 3670.0041
ILE 3680.0051
VAL 3690.0045
LYS 3700.0044
TRP 3710.0037
ASP 3720.0044
ARG 3730.0039
ASP 3740.0039
MET 3750.0026
SER 10.0032
GLN 20.0034
PHE 30.0034
ARG 40.0035
VAL 50.0034
SER 60.0058
PRO 70.0065
LEU 80.0067
ASP 90.0082
ARG 100.0078
THR 110.0089
TRP 120.0090
ASN 130.0098
LEU 140.0097
GLY 150.0100
GLU 160.0095
THR 170.0079
VAL 180.0067
GLU 190.0060
LEU 200.0053
LYS 210.0037
CYS 220.0034
GLN 230.0038
VAL 240.0036
LEU 250.0041
LEU 260.0035
SER 270.0036
ASN 280.0036
PRO 290.0034
THR 300.0033
SER 310.0038
GLY 320.0032
CYS 330.0029
SER 340.0021
TRP 350.0021
LEU 360.0018
PHE 370.0019
GLN 380.0021
PRO 390.0021
ARG 400.0022
GLY 410.0075
ALA 420.0064
ALA 430.0049
ALA 440.0053
SER 450.0041
PRO 460.0021
THR 470.0016
PHE 480.0017
LEU 490.0016
LEU 500.0018
TYR 510.0021
LEU 520.0024
SER 530.0027
GLN 540.0029
ASN 550.0023
LYS 560.0027
PRO 570.0022
LYS 580.0014
ALA 590.0006
ALA 600.0006
GLU 610.0034
GLY 620.0045
LEU 630.0037
ASP 640.0046
THR 650.0034
GLN 660.0054
ARG 670.0057
PHE 680.0040
SER 690.0034
GLY 700.0034
LYS 710.0033
ARG 720.0037
LEU 730.0047
GLY 740.0050
ASP 750.0046
THR 760.0050
PHE 770.0039
VAL 780.0040
LEU 790.0035
THR 800.0042
LEU 810.0056
SER 820.0075
ASP 830.0087
PHE 840.0078
ARG 850.0080
ARG 860.0070
GLU 870.0060
ASN 880.0051
GLU 890.0046
GLY 900.0033
TYR 910.0023
TYR 920.0025
PHE 930.0026
CYS 940.0028
SER 950.0029
ALA 960.0035
LEU 970.0036
SER 980.0040
ASN 990.0042
SER 1000.0040
ILE 1010.0038
MET 1020.0034
TYR 1030.0035
PHE 1040.0032
SER 1050.0034
HIS 1060.0040
PHE 1070.0033
VAL 1080.0036
PRO 1090.0036
VAL 1100.0039
PHE 1110.0058
LEU 1120.0081
PRO 1130.0094
ALA 1140.0081
SER 10.0036
GLN 20.0040
PHE 30.0033
ARG 40.0029
VAL 50.0021
SER 60.0028
PRO 70.0028
LEU 80.0017
ASP 90.0028
ARG 100.0037
THR 110.0045
TRP 120.0054
ASN 130.0070
LEU 140.0075
GLY 150.0075
GLU 160.0064
THR 170.0052
VAL 180.0037
GLU 190.0035
LEU 200.0025
LYS 210.0027
CYS 220.0029
GLN 230.0039
VAL 240.0044
LEU 250.0050
LEU 260.0041
SER 270.0047
ASN 280.0050
PRO 290.0047
THR 300.0050
SER 310.0049
GLY 320.0043
CYS 330.0036
SER 340.0031
TRP 350.0024
LEU 360.0025
PHE 370.0021
GLN 380.0028
PRO 390.0030
ARG 400.0036
GLY 410.0043
ALA 420.0035
ALA 430.0028
ALA 440.0031
SER 450.0028
PRO 460.0031
THR 470.0029
PHE 480.0030
LEU 490.0026
LEU 500.0029
TYR 510.0038
LEU 520.0039
SER 530.0041
GLN 540.0042
ASN 550.0040
LYS 560.0042
PRO 570.0039
LYS 580.0040
ALA 590.0036
ALA 600.0036
GLU 610.0032
GLY 620.0019
LEU 630.0011
ASP 640.0005
THR 650.0015
GLN 660.0027
ARG 670.0026
PHE 680.0013
SER 690.0024
GLY 700.0030
LYS 710.0037
ARG 720.0046
LEU 730.0053
GLY 740.0060
ASP 750.0055
THR 760.0046
PHE 770.0038
VAL 780.0031
LEU 790.0021
THR 800.0024
LEU 810.0028
SER 820.0045
ASP 830.0056
PHE 840.0050
ARG 850.0058
ARG 860.0066
GLU 870.0057
ASN 880.0035
GLU 890.0036
GLY 900.0028
TYR 910.0019
TYR 920.0013
PHE 930.0020
CYS 940.0026
SER 950.0035
ALA 960.0034
LEU 970.0035
SER 980.0035
ASN 990.0036
SER 1000.0035
ILE 1010.0028
MET 1020.0028
TYR 1030.0026
PHE 1040.0026
SER 1050.0025
HIS 1060.0027
PHE 1070.0018
VAL 1080.0006
PRO 1090.0013
VAL 1100.0019
PHE 1110.0036
LEU 1120.0057
PRO 1130.0066
ALA 1140.0073

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.