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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0881
MET 10.0022
SER 20.0018
THR 30.0007
ILE 40.0011
THR 50.0011
LYS 60.0018
ASP 70.0011
GLN 80.0010
ILE 90.0015
LEU 100.0012
GLU 110.0007
GLY 120.0006
VAL 130.0012
ALA 140.0013
ALA 150.0012
LEU 160.0014
SER 170.0031
VAL 180.0040
MET 190.0038
GLU 200.0020
ILE 210.0018
VAL 220.0026
GLU 230.0017
LEU 240.0016
ILE 250.0025
SER 260.0015
ALA 270.0042
MET 280.0027
GLU 290.0019
GLU 300.0046
LYS 310.0055
PHE 320.0018
GLY 330.0059
VAL 340.0066
SER 350.0080
ALA 360.0103
ALA 370.0094
ALA 380.0073
VAL 390.0057
ALA 400.0055
ALA 410.0090
GLY 420.0107
PRO 430.0073
ALA 440.0144
ALA 450.0146
ALA 460.0160
VAL 470.0131
GLU 480.0214
ALA 490.0262
ALA 500.0250
GLU 510.0182
GLU 520.0147
GLN 530.0102
THR 540.0072
GLU 550.0037
PHE 560.0053
ASP 570.0052
VAL 580.0046
VAL 590.0054
LEU 600.0055
ALA 610.0079
SER 620.0078
PHE 630.0069
GLY 640.0085
GLU 650.0096
ASN 660.0083
LYS 670.0070
VAL 680.0065
ALA 690.0059
VAL 700.0047
ILE 710.0033
LYS 720.0034
ALA 730.0029
VAL 740.0020
ARG 750.0011
GLY 760.0015
ALA 770.0016
THR 780.0022
GLY 790.0022
LEU 800.0021
GLY 810.0026
LEU 820.0019
LYS 830.0012
GLU 840.0017
ALA 850.0014
LYS 860.0018
ASP 870.0022
LEU 880.0033
VAL 890.0039
GLU 900.0040
SER 910.0052
ALA 920.0053
PRO 930.0055
ALA 940.0052
VAL 950.0050
LEU 960.0043
LYS 970.0041
GLU 980.0042
GLY 990.0044
VAL 1000.0045
ASN 1010.0063
LYS 1020.0072
ASP 1030.0078
GLU 1040.0061
ALA 1050.0049
GLU 1060.0054
THR 1070.0044
LEU 1080.0034
LYS 1090.0040
LYS 1100.0033
SER 1110.0025
LEU 1120.0037
GLU 1130.0050
GLU 1140.0046
ALA 1150.0055
GLY 1160.0063
ALA 1170.0060
SER 1180.0067
VAL 1190.0058
GLU 1200.0068
ILE 1210.0060
LYS 1220.0066
GLU 1230.0069
ALA 1240.0074
ALA 1250.0086
ALA 1260.0081
LYS 1270.0065
ALA 1280.0066
TYR 1290.0129
LYS 1300.0146
ILE 1310.0289
ILE 1320.0314
SER 1330.0343
LEU 1340.0351
LYS 1350.0401
TYR 1360.0336
THR 1370.0279
ARG 1380.0258
LYS 1390.0215
VAL 1400.0227
CYS 1410.0040
ILE 1420.0191
GLY 1430.0323
PRO 1440.0474
GLY 1450.0666
PRO 1460.0757
GLY 1470.0429
LYS 1480.0258
ALA 1490.0277
TYR 1500.0365
LYS 1510.0329
ILE 1520.0222
ILE 1530.0159
SER 1540.0066
LEU 1550.0146
LYS 1560.0218
TYR 1570.0211
THR 1580.0269
ARG 1590.0251
LYS 1600.0363
VAL 1610.0274
CYS 1620.0405
GLY 1630.0453
PRO 1640.0469
GLY 1650.0609
PRO 1660.0881
GLY 1670.0603
GLY 1680.0554
LYS 1690.0206
ALA 1700.0163
TYR 1710.0390
LYS 1720.0367
ILE 1730.0512
ILE 1740.0520
SER 1750.0646
LEU 1760.0496
LYS 1770.0357
TYR 1780.0236
THR 1790.0061
ARG 1800.0142
LYS 1810.0317
VAL 1820.0428
GLY 1830.0475
PRO 1840.0448
GLY 1850.0283
PRO 1860.0193
GLY 1870.0137
ILE 1880.0109
ILE 1890.0112
SER 1900.0155
LEU 1910.0120
LYS 1920.0141
TYR 1930.0112
THR 1940.0189
ARG 1950.0157
LYS 1960.0242
VAL 1970.0185
CYS 1980.0184
ILE 1990.0176
GLN 2000.0140
LEU 2010.0048
GLY 2020.0031
GLY 2030.0021
PRO 2040.0037
GLY 2050.0057
PRO 2060.0026
GLY 2070.0026
ASN 2080.0028
ILE 2090.0032
LYS 2100.0031
THR 2110.0027
ALA 2120.0028
PHE 2130.0023
HIS 2140.0018
CYS 2150.0021
TYR 2160.0037
ALA 2170.0043
ALA 2180.0031
TYR 2190.0032
MET 2200.0048
THR 2210.0032
SER 2220.0034
ILE 2230.0036
LYS 2240.0036
ALA 2250.0039
CYS 2260.0045
ASP 2270.0031
LEU 2280.0033
LYS 2290.0026
LYS 2300.0031
PRO 2310.0036
LEU 2320.0017
MET 2330.0013
GLU 2340.0022
SER 2350.0034
GLY 2360.0021
TRP 2370.0013
SER 2380.0012
ASP 2390.0007
THR 2400.0015
ALA 2410.0042
HIS 2420.0024
GLY 2430.0024
LYS 2440.0019
LYS 2450.0022
SER 2460.0011
LEU 2470.0010
PRO 2480.0014
SER 2490.0017
SER 2500.0014
SER 2510.0009
SER 2520.0009
TYR 2530.0012
SER 2540.0020
TYR 2550.0025
ARG 2560.0024
ARG 2570.0023
LYS 2580.0018
LEU 2590.0016
THR 2600.0012
ASN 2610.0009
PRO 2620.0009
ALA 2630.0004
ASN 2640.0005
LYS 2650.0003
GLU 2660.0007
GLU 2670.0001
SER 2680.0002
ILE 2690.0008
LYS 2700.0006
LYS 2710.0010
GLN 2720.0016
LYS 2730.0010
TYR 2740.0016
SER 2750.0012
TYR 2760.0007
PRO 2770.0003
TRP 2780.0007
GLN 2790.0008
THR 2800.0003
SER 2810.0010
LYS 2820.0004
CYS 2830.0004
PHE 2840.0009
ASP 2880.0020
TYR 2890.0014
GLN 2900.0021
TYR 2910.0045
CYS 2970.0327
ASN 2980.0253
PRO 2990.0152
GLY 3000.0044
LYS 3010.0106
LYS 3020.0142
ASN 3030.0082
THR 3040.0145
ILE 3050.0064
SER 3060.0111
GLY 3070.0151
TYR 3080.0148
LYS 3090.0075
ARG 3100.0099
MET 3110.0144
MET 3120.0088
ALA 3130.0099
THR 3140.0129
LYS 3150.0101
ASP 3160.0116
SER 3170.0160
PHE 3180.0108
GLN 3190.0073
SER 3200.0011
PHE 3210.0043
ASN 3220.0050
LEU 3230.0054
THR 3240.0067
GLU 3250.0073
PRO 3260.0063
HIS 3270.0073
ILE 3280.0093
THR 3290.0097
THR 3300.0129
ASN 3310.0119
LYS 3320.0073
LEU 3330.0062
GLU 3340.0045
TRP 3350.0050
ILE 3360.0058
ASP 3370.0050
PRO 3380.0063
ASP 3390.0058
GLY 3400.0057
ASN 3410.0046
THR 3420.0038
ARG 3430.0037
GLY 3440.0034
GLY 3450.0043
GLY 3460.0032
GLY 10.0116
SER 20.0109
HIS 30.0097
SER 40.0087
MET 50.0075
ARG 60.0062
TYR 70.0050
PHE 80.0047
PHE 90.0035
THR 100.0036
SER 110.0030
VAL 120.0045
SER 130.0048
ARG 140.0066
PRO 150.0080
GLY 160.0125
ARG 170.0102
GLY 180.0068
GLU 190.0039
PRO 200.0032
ARG 210.0029
PHE 220.0027
ILE 230.0038
ALA 240.0041
VAL 250.0055
GLY 260.0057
TYR 270.0065
VAL 280.0072
ASP 290.0077
ASP 300.0075
THR 310.0085
GLN 320.0076
PHE 330.0076
VAL 340.0067
ARG 350.0059
PHE 360.0053
ASP 370.0045
SER 380.0028
ASP 390.0034
ALA 400.0052
ALA 410.0069
SER 420.0083
GLN 430.0066
ARG 440.0076
MET 450.0073
GLU 460.0077
PRO 470.0089
ARG 480.0093
ALA 490.0109
PRO 500.0126
TRP 510.0126
ILE 520.0109
GLU 530.0121
GLN 540.0133
GLU 550.0117
GLY 560.0136
PRO 570.0132
GLU 580.0122
TYR 590.0105
TRP 600.0101
ASP 610.0107
GLY 620.0095
GLU 630.0079
THR 640.0078
ARG 650.0077
LYS 660.0059
VAL 670.0047
LYS 680.0044
ALA 690.0043
HIS 700.0025
SER 710.0014
GLN 720.0017
THR 730.0018
HIS 740.0009
ARG 750.0019
VAL 760.0024
ASP 770.0018
LEU 780.0027
GLY 790.0037
THR 800.0033
LEU 810.0029
ARG 820.0035
GLY 830.0036
TYR 840.0028
TYR 850.0026
ASN 860.0049
GLN 870.0037
SER 880.0064
GLU 890.0086
ALA 900.0091
GLY 910.0063
SER 920.0056
HIS 930.0044
THR 940.0039
VAL 950.0028
GLN 960.0037
ARG 970.0034
MET 980.0043
TYR 990.0046
GLY 1000.0056
CYS 1010.0077
ASP 1020.0094
VAL 1030.0108
GLY 1040.0125
SER 1050.0137
ASP 1060.0140
TRP 1070.0121
ARG 1080.0120
PHE 1090.0106
LEU 1100.0109
ARG 1110.0081
GLY 1120.0065
TYR 1130.0055
HIS 1140.0040
GLN 1150.0042
TYR 1160.0026
ALA 1170.0029
TYR 1180.0030
ASP 1190.0035
GLY 1200.0038
LYS 1210.0041
ASP 1220.0036
TYR 1230.0026
ILE 1240.0024
ALA 1250.0031
LEU 1260.0043
LYS 1270.0051
GLU 1280.0060
ASP 1290.0061
LEU 1300.0054
ARG 1310.0059
SER 1320.0050
TRP 1330.0039
THR 1340.0037
ALA 1350.0028
ALA 1360.0022
ASP 1370.0017
MET 1380.0017
ALA 1390.0021
ALA 1400.0015
GLN 1410.0021
THR 1420.0026
THR 1430.0026
LYS 1440.0030
HIS 1450.0038
LYS 1460.0043
TRP 1470.0041
GLU 1480.0052
ALA 1490.0063
ALA 1500.0061
HIS 1510.0062
VAL 1520.0048
ALA 1530.0051
GLU 1540.0066
GLN 1550.0059
LEU 1560.0049
ARG 1570.0063
ALA 1580.0072
TYR 1590.0064
LEU 1600.0068
GLU 1610.0083
GLY 1620.0088
THR 1630.0081
CYS 1640.0079
VAL 1650.0094
GLU 1660.0095
TRP 1670.0092
LEU 1680.0096
ARG 1690.0107
ARG 1700.0106
TYR 1710.0093
LEU 1720.0099
GLU 1730.0104
ASN 1740.0100
GLY 1750.0098
LYS 1760.0087
GLU 1770.0088
THR 1780.0081
LEU 1790.0079
GLN 1800.0087
ARG 1810.0045
THR 1820.0046
ASP 1830.0049
ALA 1840.0053
PRO 1850.0053
LYS 1860.0032
THR 1870.0037
HIS 1880.0049
MET 1890.0050
THR 1900.0058
HIS 1910.0072
HIS 1920.0087
ALA 1930.0104
VAL 1940.0093
SER 1950.0118
ASP 1960.0146
HIS 1970.0116
GLU 1980.0082
ALA 1990.0079
THR 2000.0051
LEU 2010.0041
ARG 2020.0028
CYS 2030.0022
TRP 2040.0016
ALA 2050.0014
LEU 2060.0026
SER 2070.0024
PHE 2080.0033
TYR 2090.0039
PRO 2100.0046
ALA 2110.0041
GLU 2120.0050
ILE 2130.0044
THR 2140.0048
LEU 2150.0038
THR 2160.0044
TRP 2170.0044
GLN 2180.0070
ARG 2190.0084
ASP 2200.0112
GLY 2210.0094
GLU 2220.0086
ASP 2230.0068
GLN 2240.0053
THR 2250.0055
GLN 2260.0039
ASP 2270.0027
THR 2280.0024
GLU 2290.0019
LEU 2300.0031
VAL 2310.0035
GLU 2320.0038
THR 2330.0034
ARG 2340.0031
PRO 2350.0030
ALA 2360.0034
GLY 2370.0048
ASP 2380.0045
GLY 2390.0038
THR 2400.0027
PHE 2410.0028
GLN 2420.0023
LYS 2430.0025
TRP 2440.0021
ALA 2450.0023
ALA 2460.0008
VAL 2470.0017
VAL 2480.0031
VAL 2490.0054
PRO 2500.0074
SER 2510.0108
GLY 2520.0129
GLN 2530.0112
GLU 2540.0107
GLN 2550.0133
ARG 2560.0112
TYR 2570.0084
THR 2580.0080
CYS 2590.0055
HIS 2600.0059
VAL 2610.0049
GLN 2620.0057
HIS 2630.0050
GLU 2640.0056
GLY 2650.0047
LEU 2660.0077
PRO 2670.0119
LYS 2680.0129
PRO 2690.0103
LEU 2700.0089
THR 2710.0100
LEU 2720.0093
ARG 2730.0113
TRP 2740.0108
GLU 2750.0143
PRO 2760.0189
GLN 2780.0033
ARG 2790.0033
THR 2800.0033
PRO 2810.0033
LYS 2820.0028
ILE 2830.0031
GLN 2840.0026
VAL 2850.0030
TYR 2860.0038
SER 2870.0048
ARG 2880.0059
HIS 2890.0078
PRO 2900.0090
ALA 2910.0100
GLU 2920.0128
ASN 2930.0148
GLY 2940.0158
LYS 2950.0149
SER 2960.0132
ASN 2970.0106
PHE 2980.0076
LEU 2990.0056
ASN 3000.0041
CYS 3010.0028
TYR 3020.0032
VAL 3030.0041
SER 3040.0040
GLY 3050.0040
PHE 3060.0041
HIS 3070.0043
PRO 3080.0047
SER 3090.0050
ASP 3100.0051
ILE 3110.0046
GLU 3120.0046
VAL 3130.0045
ASP 3140.0034
LEU 3150.0036
LEU 3160.0041
LYS 3170.0062
ASN 3180.0074
GLY 3190.0055
GLU 3200.0043
ARG 3210.0038
ILE 3220.0058
GLU 3230.0074
LYS 3240.0088
VAL 3250.0070
GLU 3260.0078
HIS 3270.0067
SER 3280.0061
ASP 3290.0054
LEU 3300.0053
SER 3310.0055
PHE 3320.0058
SER 3330.0051
LYS 3340.0049
ASP 3350.0047
TRP 3360.0050
SER 3370.0051
PHE 3380.0053
TYR 3390.0051
LEU 3400.0049
LEU 3410.0048
TYR 3420.0047
TYR 3430.0058
THR 3440.0070
GLU 3450.0091
PHE 3460.0093
THR 3470.0113
PRO 3480.0112
THR 3490.0142
GLU 3500.0154
LYS 3510.0151
ASP 3520.0116
GLU 3530.0085
TYR 3540.0063
ALA 3550.0043
CYS 3560.0027
ARG 3570.0032
VAL 3580.0029
ASN 3590.0035
HIS 3600.0037
VAL 3610.0041
THR 3620.0035
LEU 3630.0037
SER 3640.0039
GLN 3650.0031
PRO 3660.0027
LYS 3670.0029
ILE 3680.0042
VAL 3690.0042
LYS 3700.0050
TRP 3710.0050
ASP 3720.0063
ARG 3730.0054
ASP 3740.0065
MET 3750.0054
SER 10.0043
GLN 20.0044
PHE 30.0045
ARG 40.0048
VAL 50.0045
SER 60.0050
PRO 70.0046
LEU 80.0045
ASP 90.0050
ARG 100.0038
THR 110.0029
TRP 120.0015
ASN 130.0014
LEU 140.0025
GLY 150.0030
GLU 160.0033
THR 170.0047
VAL 180.0039
GLU 190.0054
LEU 200.0051
LYS 210.0057
CYS 220.0053
GLN 230.0057
VAL 240.0051
LEU 250.0054
LEU 260.0049
SER 270.0051
ASN 280.0045
PRO 290.0045
THR 300.0041
SER 310.0060
GLY 320.0063
CYS 330.0057
SER 340.0050
TRP 350.0047
LEU 360.0032
PHE 370.0020
GLN 380.0011
PRO 390.0012
ARG 400.0021
GLY 410.0015
ALA 420.0012
ALA 430.0007
ALA 440.0007
SER 450.0015
PRO 460.0021
THR 470.0032
PHE 480.0044
LEU 490.0051
LEU 500.0063
TYR 510.0068
LEU 520.0077
SER 530.0083
GLN 540.0095
ASN 550.0099
LYS 560.0107
PRO 570.0093
LYS 580.0086
ALA 590.0079
ALA 600.0069
GLU 610.0084
GLY 620.0097
LEU 630.0088
ASP 640.0101
THR 650.0104
GLN 660.0111
ARG 670.0088
PHE 680.0080
SER 690.0091
GLY 700.0092
LYS 710.0088
ARG 720.0085
LEU 730.0094
GLY 740.0091
ASP 750.0078
THR 760.0079
PHE 770.0070
VAL 780.0071
LEU 790.0062
THR 800.0069
LEU 810.0060
SER 820.0063
ASP 830.0051
PHE 840.0033
ARG 850.0041
ARG 860.0037
GLU 870.0050
ASN 880.0034
GLU 890.0021
GLY 900.0018
TYR 910.0012
TYR 920.0020
PHE 930.0028
CYS 940.0038
SER 950.0040
ALA 960.0049
LEU 970.0044
SER 980.0039
ASN 990.0033
SER 1000.0033
ILE 1010.0039
MET 1020.0036
TYR 1030.0037
PHE 1040.0034
SER 1050.0037
HIS 1060.0029
PHE 1070.0021
VAL 1080.0021
PRO 1090.0016
VAL 1100.0010
PHE 1110.0022
LEU 1120.0030
PRO 1130.0040
ALA 1140.0052
SER 10.0037
GLN 20.0047
PHE 30.0045
ARG 40.0045
VAL 50.0040
SER 60.0044
PRO 70.0043
LEU 80.0038
ASP 90.0046
ARG 100.0042
THR 110.0035
TRP 120.0027
ASN 130.0024
LEU 140.0014
GLY 150.0014
GLU 160.0026
THR 170.0031
VAL 180.0030
GLU 190.0039
LEU 200.0038
LYS 210.0044
CYS 220.0045
GLN 230.0051
VAL 240.0054
LEU 250.0055
LEU 260.0059
SER 270.0068
ASN 280.0069
PRO 290.0060
THR 300.0058
SER 310.0054
GLY 320.0050
CYS 330.0044
SER 340.0041
TRP 350.0037
LEU 360.0030
PHE 370.0023
GLN 380.0017
PRO 390.0016
ARG 400.0016
GLY 410.0022
ALA 420.0022
ALA 430.0022
ALA 440.0020
SER 450.0020
PRO 460.0025
THR 470.0030
PHE 480.0035
LEU 490.0036
LEU 500.0042
TYR 510.0045
LEU 520.0044
SER 530.0041
GLN 540.0038
ASN 550.0037
LYS 560.0050
PRO 570.0044
LYS 580.0043
ALA 590.0040
ALA 600.0039
GLU 610.0039
GLY 620.0042
LEU 630.0041
ASP 640.0045
THR 650.0048
GLN 660.0048
ARG 670.0039
PHE 680.0041
SER 690.0048
GLY 700.0051
LYS 710.0051
ARG 720.0054
LEU 730.0057
GLY 740.0060
ASP 750.0054
THR 760.0052
PHE 770.0049
VAL 780.0046
LEU 790.0040
THR 800.0039
LEU 810.0033
SER 820.0032
ASP 830.0020
PHE 840.0013
ARG 850.0013
ARG 860.0021
GLU 870.0027
ASN 880.0017
GLU 890.0011
GLY 900.0010
TYR 910.0009
TYR 920.0019
PHE 930.0026
CYS 940.0036
SER 950.0042
ALA 960.0049
LEU 970.0055
SER 980.0063
ASN 990.0070
SER 1000.0067
ILE 1010.0061
MET 1020.0052
TYR 1030.0046
PHE 1040.0037
SER 1050.0033
HIS 1060.0023
PHE 1070.0016
VAL 1080.0020
PRO 1090.0014
VAL 1100.0014
PHE 1110.0017
LEU 1120.0027
PRO 1130.0045
ALA 1140.0055

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.