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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0548
MET 10.0050
SER 20.0034
THR 30.0044
ILE 40.0033
THR 50.0047
LYS 60.0042
ASP 70.0039
GLN 80.0035
ILE 90.0028
LEU 100.0031
GLU 110.0028
GLY 120.0043
VAL 130.0049
ALA 140.0041
ALA 150.0048
LEU 160.0028
SER 170.0027
VAL 180.0067
MET 190.0062
GLU 200.0014
ILE 210.0041
VAL 220.0050
GLU 230.0008
LEU 240.0041
ILE 250.0064
SER 260.0023
ALA 270.0044
MET 280.0069
GLU 290.0041
GLU 300.0024
LYS 310.0067
PHE 320.0060
GLY 330.0026
VAL 340.0065
SER 350.0080
ALA 360.0102
ALA 370.0090
ALA 380.0035
VAL 390.0033
ALA 400.0038
ALA 410.0102
GLY 420.0141
PRO 430.0148
ALA 440.0125
ALA 450.0068
ALA 460.0128
VAL 470.0168
GLU 480.0317
ALA 490.0321
ALA 500.0156
GLU 510.0114
GLU 520.0111
GLN 530.0077
THR 540.0061
GLU 550.0062
PHE 560.0062
ASP 570.0055
VAL 580.0049
VAL 590.0053
LEU 600.0046
ALA 610.0045
SER 620.0042
PHE 630.0036
GLY 640.0038
GLU 650.0034
ASN 660.0033
LYS 670.0031
VAL 680.0028
ALA 690.0034
VAL 700.0036
ILE 710.0034
LYS 720.0036
ALA 730.0039
VAL 740.0039
ARG 750.0039
GLY 760.0040
ALA 770.0040
THR 780.0040
GLY 790.0040
LEU 800.0039
GLY 810.0045
LEU 820.0042
LYS 830.0040
GLU 840.0039
ALA 850.0038
LYS 860.0032
ASP 870.0031
LEU 880.0032
VAL 890.0025
GLU 900.0019
SER 910.0016
ALA 920.0018
PRO 930.0024
ALA 940.0032
VAL 950.0047
LEU 960.0038
LYS 970.0038
GLU 980.0047
GLY 990.0050
VAL 1000.0048
ASN 1010.0059
LYS 1020.0077
ASP 1030.0078
GLU 1040.0059
ALA 1050.0063
GLU 1060.0079
THR 1070.0070
LEU 1080.0055
LYS 1090.0067
LYS 1100.0073
SER 1110.0058
LEU 1120.0053
GLU 1130.0064
GLU 1140.0061
ALA 1150.0048
GLY 1160.0051
ALA 1170.0051
SER 1180.0061
VAL 1190.0064
GLU 1200.0073
ILE 1210.0073
LYS 1220.0084
GLU 1230.0089
ALA 1240.0079
ALA 1250.0106
ALA 1260.0161
LYS 1270.0163
ALA 1280.0164
TYR 1290.0176
LYS 1300.0177
ILE 1310.0232
ILE 1320.0164
SER 1330.0145
LEU 1340.0079
LYS 1350.0088
TYR 1360.0125
THR 1370.0167
ARG 1380.0214
LYS 1390.0261
VAL 1400.0300
CYS 1410.0289
ILE 1420.0242
GLY 1430.0160
PRO 1440.0131
GLY 1450.0146
PRO 1460.0486
GLY 1470.0548
LYS 1480.0386
ALA 1490.0162
TYR 1500.0173
LYS 1510.0147
ILE 1520.0132
ILE 1530.0111
SER 1540.0091
LEU 1550.0076
LYS 1560.0036
TYR 1570.0070
THR 1580.0116
ARG 1590.0161
LYS 1600.0209
VAL 1610.0258
CYS 1620.0200
GLY 1630.0191
PRO 1640.0176
GLY 1650.0144
PRO 1660.0260
GLY 1670.0346
GLY 1680.0322
LYS 1690.0286
ALA 1700.0254
TYR 1710.0185
LYS 1720.0174
ILE 1730.0156
ILE 1740.0157
SER 1750.0158
LEU 1760.0079
LYS 1770.0040
TYR 1780.0051
THR 1790.0071
ARG 1800.0118
LYS 1810.0147
VAL 1820.0102
GLY 1830.0077
PRO 1840.0059
GLY 1850.0085
PRO 1860.0124
GLY 1870.0126
ILE 1880.0174
ILE 1890.0179
SER 1900.0208
LEU 1910.0124
LYS 1920.0071
TYR 1930.0012
THR 1940.0080
ARG 1950.0118
LYS 1960.0192
VAL 1970.0185
CYS 1980.0195
ILE 1990.0182
GLN 2000.0194
LEU 2010.0136
GLY 2020.0115
GLY 2030.0084
PRO 2040.0059
GLY 2050.0051
PRO 2060.0041
GLY 2070.0049
ASN 2080.0050
ILE 2090.0043
LYS 2100.0051
THR 2110.0051
ALA 2120.0063
PHE 2130.0055
HIS 2140.0039
CYS 2150.0047
TYR 2160.0049
ALA 2170.0036
ALA 2180.0027
TYR 2190.0043
MET 2200.0052
THR 2210.0038
SER 2220.0041
ILE 2230.0056
LYS 2240.0063
ALA 2250.0078
CYS 2260.0077
ASP 2270.0079
LEU 2280.0075
LYS 2290.0050
LYS 2300.0091
PRO 2310.0035
LEU 2320.0038
MET 2330.0017
GLU 2340.0077
SER 2350.0101
GLY 2360.0039
TRP 2370.0015
SER 2380.0022
ASP 2390.0050
THR 2400.0077
ALA 2410.0243
HIS 2420.0145
GLY 2430.0125
LYS 2440.0056
LYS 2450.0066
SER 2460.0050
LEU 2470.0039
PRO 2480.0026
SER 2490.0024
SER 2500.0025
SER 2510.0030
SER 2520.0021
TYR 2530.0018
SER 2540.0023
TYR 2550.0025
ARG 2560.0035
ARG 2570.0039
LYS 2580.0027
LEU 2590.0036
THR 2600.0029
ASN 2610.0041
PRO 2620.0049
ALA 2630.0051
ASN 2640.0042
LYS 2650.0038
GLU 2660.0030
GLU 2670.0035
SER 2680.0023
ILE 2690.0031
LYS 2700.0022
LYS 2710.0015
GLN 2720.0015
LYS 2730.0011
TYR 2740.0012
SER 2750.0009
TYR 2760.0012
PRO 2770.0011
TRP 2780.0009
GLN 2790.0008
THR 2800.0007
SER 2810.0010
LYS 2820.0011
CYS 2830.0011
PHE 2840.0014
ASP 2880.0106
TYR 2890.0070
GLN 2900.0077
TYR 2910.0192
CYS 2970.0308
ASN 2980.0273
PRO 2990.0179
GLY 3000.0129
LYS 3010.0102
LYS 3020.0112
ASN 3030.0075
THR 3040.0192
ILE 3050.0114
SER 3060.0192
GLY 3070.0248
TYR 3080.0229
LYS 3090.0105
ARG 3100.0118
MET 3110.0178
MET 3120.0074
ALA 3130.0146
THR 3140.0201
LYS 3150.0122
ASP 3160.0194
SER 3170.0262
PHE 3180.0170
GLN 3190.0115
SER 3200.0020
PHE 3210.0083
ASN 3220.0077
LEU 3230.0052
THR 3240.0022
GLU 3250.0017
PRO 3260.0047
HIS 3270.0104
ILE 3280.0143
THR 3290.0191
THR 3300.0238
ASN 3310.0260
LYS 3320.0209
LEU 3330.0158
GLU 3340.0118
TRP 3350.0063
ILE 3360.0019
ASP 3370.0042
PRO 3380.0046
ASP 3390.0038
GLY 3400.0026
ASN 3410.0030
THR 3420.0035
ARG 3430.0036
GLY 3440.0040
GLY 3450.0031
GLY 3460.0055
GLY 10.0097
SER 20.0073
HIS 30.0068
SER 40.0050
MET 50.0048
ARG 60.0033
TYR 70.0029
PHE 80.0033
PHE 90.0033
THR 100.0046
SER 110.0059
VAL 120.0059
SER 130.0081
ARG 140.0092
PRO 150.0107
GLY 160.0163
ARG 170.0151
GLY 180.0138
GLU 190.0115
PRO 200.0087
ARG 210.0079
PHE 220.0067
ILE 230.0054
ALA 240.0045
VAL 250.0035
GLY 260.0041
TYR 270.0050
VAL 280.0064
ASP 290.0070
ASP 300.0067
THR 310.0074
GLN 320.0054
PHE 330.0052
VAL 340.0039
ARG 350.0041
PHE 360.0054
ASP 370.0069
SER 380.0088
ASP 390.0099
ALA 400.0092
ALA 410.0109
SER 420.0087
GLN 430.0092
ARG 440.0071
MET 450.0055
GLU 460.0041
PRO 470.0042
ARG 480.0055
ALA 490.0076
PRO 500.0092
TRP 510.0105
ILE 520.0084
GLU 530.0084
GLN 540.0102
GLU 550.0093
GLY 560.0086
PRO 570.0072
GLU 580.0100
TYR 590.0091
TRP 600.0067
ASP 610.0090
GLY 620.0101
GLU 630.0078
THR 640.0077
ARG 650.0103
LYS 660.0077
VAL 670.0062
LYS 680.0079
ALA 690.0086
HIS 700.0068
SER 710.0075
GLN 720.0088
THR 730.0082
HIS 740.0065
ARG 750.0072
VAL 760.0076
ASP 770.0075
LEU 780.0060
GLY 790.0066
THR 800.0078
LEU 810.0078
ARG 820.0098
GLY 830.0113
TYR 840.0090
TYR 850.0096
ASN 860.0163
GLN 870.0140
SER 880.0147
GLU 890.0135
ALA 900.0116
GLY 910.0071
SER 920.0060
HIS 930.0057
THR 940.0049
VAL 950.0052
GLN 960.0034
ARG 970.0023
MET 980.0022
TYR 990.0015
GLY 1000.0018
CYS 1010.0017
ASP 1020.0024
VAL 1030.0044
GLY 1040.0055
SER 1050.0089
ASP 1060.0091
TRP 1070.0081
ARG 1080.0059
PHE 1090.0040
LEU 1100.0012
ARG 1110.0044
GLY 1120.0033
TYR 1130.0031
HIS 1140.0023
GLN 1150.0031
TYR 1160.0024
ALA 1170.0034
TYR 1180.0043
ASP 1190.0052
GLY 1200.0047
LYS 1210.0057
ASP 1220.0052
TYR 1230.0041
ILE 1240.0046
ALA 1250.0058
LEU 1260.0101
LYS 1270.0148
GLU 1280.0153
ASP 1290.0188
LEU 1300.0152
ARG 1310.0218
SER 1320.0197
TRP 1330.0146
THR 1340.0141
ALA 1350.0113
ALA 1360.0104
ASP 1370.0089
MET 1380.0079
ALA 1390.0052
ALA 1400.0054
GLN 1410.0110
THR 1420.0084
THR 1430.0079
LYS 1440.0126
HIS 1450.0162
LYS 1460.0175
TRP 1470.0175
GLU 1480.0242
ALA 1490.0286
ALA 1500.0277
HIS 1510.0300
VAL 1520.0214
ALA 1530.0187
GLU 1540.0251
GLN 1550.0234
LEU 1560.0142
ARG 1570.0142
ALA 1580.0157
TYR 1590.0124
LEU 1600.0067
GLU 1610.0071
GLY 1620.0094
THR 1630.0116
CYS 1640.0081
VAL 1650.0064
GLU 1660.0108
TRP 1670.0103
LEU 1680.0086
ARG 1690.0112
ARG 1700.0128
TYR 1710.0107
LEU 1720.0118
GLU 1730.0141
ASN 1740.0136
GLY 1750.0128
LYS 1760.0129
GLU 1770.0138
THR 1780.0118
LEU 1790.0103
GLN 1800.0118
ARG 1810.0083
THR 1820.0077
ASP 1830.0087
ALA 1840.0086
PRO 1850.0091
LYS 1860.0081
THR 1870.0085
HIS 1880.0104
MET 1890.0111
THR 1900.0129
HIS 1910.0142
HIS 1920.0201
ALA 1930.0254
VAL 1940.0262
SER 1950.0322
ASP 1960.0383
HIS 1970.0315
GLU 1980.0234
ALA 1990.0211
THR 2000.0151
LEU 2010.0113
ARG 2020.0099
CYS 2030.0073
TRP 2040.0077
ALA 2050.0066
LEU 2060.0085
SER 2070.0087
PHE 2080.0080
TYR 2090.0079
PRO 2100.0079
ALA 2110.0071
GLU 2120.0072
ILE 2130.0062
THR 2140.0063
LEU 2150.0056
THR 2160.0046
TRP 2170.0062
GLN 2180.0101
ARG 2190.0137
ASP 2200.0181
GLY 2210.0137
GLU 2220.0117
ASP 2230.0079
GLN 2240.0055
THR 2250.0049
GLN 2260.0029
ASP 2270.0023
THR 2280.0024
GLU 2290.0045
LEU 2300.0056
VAL 2310.0075
GLU 2320.0070
THR 2330.0073
ARG 2340.0067
PRO 2350.0067
ALA 2360.0069
GLY 2370.0070
ASP 2380.0086
GLY 2390.0088
THR 2400.0088
PHE 2410.0079
GLN 2420.0078
LYS 2430.0076
TRP 2440.0074
ALA 2450.0070
ALA 2460.0077
VAL 2470.0077
VAL 2480.0119
VAL 2490.0144
PRO 2500.0192
SER 2510.0261
GLY 2520.0285
GLN 2530.0236
GLU 2540.0222
GLN 2550.0253
ARG 2560.0203
TYR 2570.0152
THR 2580.0131
CYS 2590.0083
HIS 2600.0070
VAL 2610.0063
GLN 2620.0067
HIS 2630.0059
GLU 2640.0065
GLY 2650.0057
LEU 2660.0080
PRO 2670.0131
LYS 2680.0150
PRO 2690.0123
LEU 2700.0115
THR 2710.0139
LEU 2720.0142
ARG 2730.0185
TRP 2740.0194
GLU 2750.0249
PRO 2760.0314
GLN 2780.0011
ARG 2790.0013
THR 2800.0027
PRO 2810.0033
LYS 2820.0038
ILE 2830.0056
GLN 2840.0055
VAL 2850.0061
TYR 2860.0057
SER 2870.0042
ARG 2880.0061
HIS 2890.0096
PRO 2900.0126
ALA 2910.0108
GLU 2920.0121
ASN 2930.0127
GLY 2940.0067
LYS 2950.0036
SER 2960.0030
ASN 2970.0023
PHE 2980.0020
LEU 2990.0035
ASN 3000.0022
CYS 3010.0043
TYR 3020.0018
VAL 3030.0030
SER 3040.0016
GLY 3050.0016
PHE 3060.0016
HIS 3070.0021
PRO 3080.0037
SER 3090.0055
ASP 3100.0068
ILE 3110.0071
GLU 3120.0098
VAL 3130.0126
ASP 3140.0168
LEU 3150.0160
LEU 3160.0217
LYS 3170.0246
ASN 3180.0318
GLY 3190.0336
GLU 3200.0339
ARG 3210.0301
ILE 3220.0258
GLU 3230.0274
LYS 3240.0245
VAL 3250.0170
GLU 3260.0144
HIS 3270.0087
SER 3280.0043
ASP 3290.0045
LEU 3300.0041
SER 3310.0041
PHE 3320.0038
SER 3330.0020
LYS 3340.0015
ASP 3350.0018
TRP 3360.0024
SER 3370.0029
PHE 3380.0023
TYR 3390.0022
LEU 3400.0033
LEU 3410.0036
TYR 3420.0055
TYR 3430.0067
THR 3440.0098
GLU 3450.0090
PHE 3460.0081
THR 3470.0069
PRO 3480.0094
THR 3490.0185
GLU 3500.0281
LYS 3510.0352
ASP 3520.0289
GLU 3530.0234
TYR 3540.0178
ALA 3550.0166
CYS 3560.0127
ARG 3570.0162
VAL 3580.0100
ASN 3590.0083
HIS 3600.0056
VAL 3610.0035
THR 3620.0022
LEU 3630.0030
SER 3640.0029
GLN 3650.0051
PRO 3660.0081
LYS 3670.0099
ILE 3680.0175
VAL 3690.0149
LYS 3700.0140
TRP 3710.0108
ASP 3720.0120
ARG 3730.0098
ASP 3740.0124
MET 3750.0095
SER 10.0028
GLN 20.0028
PHE 30.0025
ARG 40.0022
VAL 50.0020
SER 60.0045
PRO 70.0038
LEU 80.0022
ASP 90.0022
ARG 100.0014
THR 110.0008
TRP 120.0027
ASN 130.0038
LEU 140.0061
GLY 150.0072
GLU 160.0060
THR 170.0067
VAL 180.0055
GLU 190.0060
LEU 200.0051
LYS 210.0056
CYS 220.0042
GLN 230.0042
VAL 240.0032
LEU 250.0037
LEU 260.0040
SER 270.0047
ASN 280.0044
PRO 290.0039
THR 300.0037
SER 310.0051
GLY 320.0054
CYS 330.0049
SER 340.0045
TRP 350.0044
LEU 360.0033
PHE 370.0026
GLN 380.0020
PRO 390.0026
ARG 400.0029
GLY 410.0048
ALA 420.0046
ALA 430.0038
ALA 440.0038
SER 450.0035
PRO 460.0022
THR 470.0031
PHE 480.0039
LEU 490.0045
LEU 500.0056
TYR 510.0057
LEU 520.0065
SER 530.0069
GLN 540.0080
ASN 550.0083
LYS 560.0087
PRO 570.0077
LYS 580.0071
ALA 590.0066
ALA 600.0059
GLU 610.0073
GLY 620.0094
LEU 630.0091
ASP 640.0114
THR 650.0116
GLN 660.0128
ARG 670.0107
PHE 680.0095
SER 690.0100
GLY 700.0095
LYS 710.0083
ARG 720.0079
LEU 730.0085
GLY 740.0081
ASP 750.0069
THR 760.0070
PHE 770.0067
VAL 780.0068
LEU 790.0065
THR 800.0072
LEU 810.0081
SER 820.0089
ASP 830.0085
PHE 840.0068
ARG 850.0077
ARG 860.0069
GLU 870.0086
ASN 880.0065
GLU 890.0046
GLY 900.0037
TYR 910.0013
TYR 920.0020
PHE 930.0022
CYS 940.0033
SER 950.0036
ALA 960.0045
LEU 970.0036
SER 980.0033
ASN 990.0027
SER 1000.0026
ILE 1010.0037
MET 1020.0033
TYR 1030.0031
PHE 1040.0028
SER 1050.0026
HIS 1060.0016
PHE 1070.0009
VAL 1080.0010
PRO 1090.0013
VAL 1100.0021
PHE 1110.0032
LEU 1120.0042
PRO 1130.0039
ALA 1140.0058
SER 10.0066
GLN 20.0070
PHE 30.0074
ARG 40.0086
VAL 50.0079
SER 60.0094
PRO 70.0094
LEU 80.0099
ASP 90.0116
ARG 100.0100
THR 110.0086
TRP 120.0061
ASN 130.0055
LEU 140.0041
GLY 150.0025
GLU 160.0037
THR 170.0047
VAL 180.0048
GLU 190.0068
LEU 200.0069
LYS 210.0078
CYS 220.0075
GLN 230.0085
VAL 240.0079
LEU 250.0086
LEU 260.0056
SER 270.0067
ASN 280.0068
PRO 290.0060
THR 300.0063
SER 310.0040
GLY 320.0045
CYS 330.0045
SER 340.0042
TRP 350.0046
LEU 360.0030
PHE 370.0018
GLN 380.0018
PRO 390.0032
ARG 400.0045
GLY 410.0035
ALA 420.0022
ALA 430.0012
ALA 440.0017
SER 450.0012
PRO 460.0019
THR 470.0024
PHE 480.0034
LEU 490.0040
LEU 500.0051
TYR 510.0058
LEU 520.0055
SER 530.0037
GLN 540.0024
ASN 550.0029
LYS 560.0059
PRO 570.0055
LYS 580.0046
ALA 590.0052
ALA 600.0048
GLU 610.0041
GLY 620.0053
LEU 630.0052
ASP 640.0072
THR 650.0084
GLN 660.0092
ARG 670.0068
PHE 680.0065
SER 690.0082
GLY 700.0089
LYS 710.0084
ARG 720.0086
LEU 730.0100
GLY 740.0100
ASP 750.0088
THR 760.0090
PHE 770.0078
VAL 780.0077
LEU 790.0063
THR 800.0066
LEU 810.0049
SER 820.0050
ASP 830.0035
PHE 840.0025
ARG 850.0045
ARG 860.0072
GLU 870.0072
ASN 880.0039
GLU 890.0046
GLY 900.0038
TYR 910.0027
TYR 920.0025
PHE 930.0034
CYS 940.0044
SER 950.0046
ALA 960.0041
LEU 970.0036
SER 980.0036
ASN 990.0040
SER 1000.0041
ILE 1010.0042
MET 1020.0036
TYR 1030.0036
PHE 1040.0037
SER 1050.0046
HIS 1060.0053
PHE 1070.0045
VAL 1080.0050
PRO 1090.0053
VAL 1100.0046
PHE 1110.0061
LEU 1120.0080
PRO 1130.0115
ALA 1140.0143

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.