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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0527
MET 10.0107
SER 20.0084
THR 30.0110
ILE 40.0079
THR 50.0121
LYS 60.0110
ASP 70.0094
GLN 80.0081
ILE 90.0083
LEU 100.0095
GLU 110.0087
GLY 120.0117
VAL 130.0131
ALA 140.0120
ALA 150.0132
LEU 160.0069
SER 170.0066
VAL 180.0170
MET 190.0164
GLU 200.0044
ILE 210.0096
VAL 220.0125
GLU 230.0037
LEU 240.0079
ILE 250.0142
SER 260.0058
ALA 270.0080
MET 280.0127
GLU 290.0075
GLU 300.0049
LYS 310.0127
PHE 320.0110
GLY 330.0046
VAL 340.0079
SER 350.0102
ALA 360.0104
ALA 370.0092
ALA 380.0059
VAL 390.0106
ALA 400.0116
ALA 410.0244
GLY 420.0284
PRO 430.0233
ALA 440.0180
ALA 450.0124
ALA 460.0098
VAL 470.0240
GLU 480.0306
ALA 490.0296
ALA 500.0159
GLU 510.0061
GLU 520.0057
GLN 530.0064
THR 540.0102
GLU 550.0107
PHE 560.0124
ASP 570.0138
VAL 580.0132
VAL 590.0154
LEU 600.0155
ALA 610.0178
SER 620.0181
PHE 630.0142
GLY 640.0186
GLU 650.0208
ASN 660.0157
LYS 670.0106
VAL 680.0065
ALA 690.0096
VAL 700.0067
ILE 710.0030
LYS 720.0072
ALA 730.0055
VAL 740.0048
ARG 750.0109
GLY 760.0114
ALA 770.0060
THR 780.0126
GLY 790.0187
LEU 800.0203
GLY 810.0225
LEU 820.0162
LYS 830.0189
GLU 840.0211
ALA 850.0129
LYS 860.0114
ASP 870.0162
LEU 880.0163
VAL 890.0133
GLU 900.0160
SER 910.0146
ALA 920.0154
PRO 930.0167
ALA 940.0169
VAL 950.0180
LEU 960.0143
LYS 970.0130
GLU 980.0147
GLY 990.0128
VAL 1000.0092
ASN 1010.0070
LYS 1020.0085
ASP 1030.0060
GLU 1040.0050
ALA 1050.0086
GLU 1060.0095
THR 1070.0066
LEU 1080.0060
LYS 1090.0107
LYS 1100.0116
SER 1110.0095
LEU 1120.0096
GLU 1130.0156
GLU 1140.0165
ALA 1150.0133
GLY 1160.0160
ALA 1170.0144
SER 1180.0174
VAL 1190.0153
GLU 1200.0176
ILE 1210.0139
LYS 1220.0125
GLU 1230.0101
ALA 1240.0104
ALA 1250.0102
ALA 1260.0057
LYS 1270.0075
ALA 1280.0061
TYR 1290.0095
LYS 1300.0092
ILE 1310.0120
ILE 1320.0081
SER 1330.0076
LEU 1340.0044
LYS 1350.0055
TYR 1360.0067
THR 1370.0078
ARG 1380.0084
LYS 1390.0099
VAL 1400.0106
CYS 1410.0098
ILE 1420.0083
GLY 1430.0074
PRO 1440.0075
GLY 1450.0098
PRO 1460.0129
GLY 1470.0160
LYS 1480.0123
ALA 1490.0080
TYR 1500.0051
LYS 1510.0066
ILE 1520.0063
ILE 1530.0066
SER 1540.0067
LEU 1550.0071
LYS 1560.0049
TYR 1570.0058
THR 1580.0061
ARG 1590.0097
LYS 1600.0118
VAL 1610.0174
CYS 1620.0174
GLY 1630.0209
PRO 1640.0181
GLY 1650.0195
PRO 1660.0314
GLY 1670.0217
GLY 1680.0123
LYS 1690.0081
ALA 1700.0119
TYR 1710.0086
LYS 1720.0084
ILE 1730.0060
ILE 1740.0073
SER 1750.0056
LEU 1760.0068
LYS 1770.0058
TYR 1780.0067
THR 1790.0064
ARG 1800.0078
LYS 1810.0091
VAL 1820.0069
GLY 1830.0078
PRO 1840.0075
GLY 1850.0068
PRO 1860.0051
GLY 1870.0056
ILE 1880.0072
ILE 1890.0077
SER 1900.0098
LEU 1910.0075
LYS 1920.0050
TYR 1930.0038
THR 1940.0051
ARG 1950.0076
LYS 1960.0111
VAL 1970.0105
CYS 1980.0106
ILE 1990.0095
GLN 2000.0098
LEU 2010.0067
GLY 2020.0074
GLY 2030.0071
PRO 2040.0061
GLY 2050.0062
PRO 2060.0042
GLY 2070.0067
ASN 2080.0083
ILE 2090.0077
LYS 2100.0089
THR 2110.0103
ALA 2120.0116
PHE 2130.0102
HIS 2140.0087
CYS 2150.0100
TYR 2160.0104
ALA 2170.0082
ALA 2180.0072
TYR 2190.0078
MET 2200.0065
THR 2210.0033
SER 2220.0040
ILE 2230.0043
LYS 2240.0045
ALA 2250.0046
CYS 2260.0190
ASP 2270.0230
LEU 2280.0085
LYS 2290.0092
LYS 2300.0157
PRO 2310.0161
LEU 2320.0153
MET 2330.0149
GLU 2340.0151
SER 2350.0158
GLY 2360.0121
TRP 2370.0094
SER 2380.0108
ASP 2390.0094
THR 2400.0125
ALA 2410.0527
HIS 2420.0308
GLY 2430.0290
LYS 2440.0202
LYS 2450.0208
SER 2460.0083
LEU 2470.0074
PRO 2480.0100
SER 2490.0114
SER 2500.0109
SER 2510.0079
SER 2520.0107
TYR 2530.0120
SER 2540.0179
TYR 2550.0190
ARG 2560.0167
ARG 2570.0170
LYS 2580.0112
LEU 2590.0129
THR 2600.0089
ASN 2610.0115
PRO 2620.0143
ALA 2630.0093
ASN 2640.0055
LYS 2650.0072
GLU 2660.0068
GLU 2670.0118
SER 2680.0051
ILE 2690.0113
LYS 2700.0064
LYS 2710.0087
GLN 2720.0086
LYS 2730.0085
TYR 2740.0107
SER 2750.0113
TYR 2760.0093
PRO 2770.0078
TRP 2780.0053
GLN 2790.0055
THR 2800.0076
SER 2810.0091
LYS 2820.0090
CYS 2830.0070
PHE 2840.0104
ASP 2880.0204
TYR 2890.0123
GLN 2900.0120
TYR 2910.0313
CYS 2970.0190
ASN 2980.0146
PRO 2990.0052
GLY 3000.0041
LYS 3010.0074
LYS 3020.0081
ASN 3030.0060
THR 3040.0082
ILE 3050.0053
SER 3060.0079
GLY 3070.0077
TYR 3080.0108
LYS 3090.0088
ARG 3100.0067
MET 3110.0103
MET 3120.0113
ALA 3130.0101
THR 3140.0106
LYS 3150.0127
ASP 3160.0140
SER 3170.0111
PHE 3180.0084
GLN 3190.0050
SER 3200.0043
PHE 3210.0031
ASN 3220.0038
LEU 3230.0030
THR 3240.0042
GLU 3250.0046
PRO 3260.0030
HIS 3270.0037
ILE 3280.0032
THR 3290.0032
THR 3300.0053
ASN 3310.0062
LYS 3320.0045
LEU 3330.0039
GLU 3340.0044
TRP 3350.0044
ILE 3360.0059
ASP 3370.0047
PRO 3380.0053
ASP 3390.0049
GLY 3400.0040
ASN 3410.0038
THR 3420.0032
ARG 3430.0006
GLY 3440.0024
GLY 3450.0010
GLY 3460.0035
GLY 10.0110
SER 20.0100
HIS 30.0093
SER 40.0083
MET 50.0077
ARG 60.0070
TYR 70.0068
PHE 80.0068
PHE 90.0069
THR 100.0072
SER 110.0077
VAL 120.0068
SER 130.0080
ARG 140.0075
PRO 150.0085
GLY 160.0105
ARG 170.0106
GLY 180.0117
GLU 190.0115
PRO 200.0089
ARG 210.0089
PHE 220.0086
ILE 230.0076
ALA 240.0078
VAL 250.0072
GLY 260.0071
TYR 270.0065
VAL 280.0062
ASP 290.0062
ASP 300.0061
THR 310.0072
GLN 320.0067
PHE 330.0067
VAL 340.0074
ARG 350.0085
PHE 360.0094
ASP 370.0095
SER 380.0117
ASP 390.0118
ALA 400.0123
ALA 410.0177
SER 420.0164
GLN 430.0164
ARG 440.0144
MET 450.0116
GLU 460.0100
PRO 470.0086
ARG 480.0088
ALA 490.0090
PRO 500.0095
TRP 510.0085
ILE 520.0076
GLU 530.0089
GLN 540.0082
GLU 550.0078
GLY 560.0111
PRO 570.0141
GLU 580.0164
TYR 590.0138
TRP 600.0134
ASP 610.0170
GLY 620.0173
GLU 630.0143
THR 640.0149
ARG 650.0181
LYS 660.0147
VAL 670.0117
LYS 680.0133
ALA 690.0148
HIS 700.0122
SER 710.0088
GLN 720.0099
THR 730.0102
HIS 740.0083
ARG 750.0077
VAL 760.0059
ASP 770.0068
LEU 780.0061
GLY 790.0055
THR 800.0064
LEU 810.0045
ARG 820.0058
GLY 830.0055
TYR 840.0044
TYR 850.0054
ASN 860.0077
GLN 870.0061
SER 880.0058
GLU 890.0055
ALA 900.0038
GLY 910.0072
SER 920.0070
HIS 930.0068
THR 940.0067
VAL 950.0065
GLN 960.0059
ARG 970.0053
MET 980.0058
TYR 990.0056
GLY 1000.0062
CYS 1010.0063
ASP 1020.0074
VAL 1030.0094
GLY 1040.0105
SER 1050.0130
ASP 1060.0143
TRP 1070.0120
ARG 1080.0110
PHE 1090.0081
LEU 1100.0061
ARG 1110.0028
GLY 1120.0025
TYR 1130.0027
HIS 1140.0024
GLN 1150.0039
TYR 1160.0030
ALA 1170.0044
TYR 1180.0051
ASP 1190.0065
GLY 1200.0065
LYS 1210.0070
ASP 1220.0066
TYR 1230.0050
ILE 1240.0055
ALA 1250.0063
LEU 1260.0088
LYS 1270.0139
GLU 1280.0134
ASP 1290.0159
LEU 1300.0121
ARG 1310.0203
SER 1320.0201
TRP 1330.0160
THR 1340.0164
ALA 1350.0150
ALA 1360.0146
ASP 1370.0130
MET 1380.0129
ALA 1390.0089
ALA 1400.0093
GLN 1410.0174
THR 1420.0158
THR 1430.0128
LYS 1440.0176
HIS 1450.0234
LYS 1460.0239
TRP 1470.0215
GLU 1480.0295
ALA 1490.0358
ALA 1500.0332
HIS 1510.0325
VAL 1520.0228
ALA 1530.0178
GLU 1540.0236
GLN 1550.0228
LEU 1560.0118
ARG 1570.0103
ALA 1580.0132
TYR 1590.0124
LEU 1600.0061
GLU 1610.0060
GLY 1620.0097
THR 1630.0119
CYS 1640.0101
VAL 1650.0103
GLU 1660.0123
TRP 1670.0102
LEU 1680.0097
ARG 1690.0121
ARG 1700.0116
TYR 1710.0088
LEU 1720.0101
GLU 1730.0107
ASN 1740.0091
GLY 1750.0091
LYS 1760.0083
GLU 1770.0089
THR 1780.0076
LEU 1790.0071
GLN 1800.0085
ARG 1810.0055
THR 1820.0063
ASP 1830.0056
ALA 1840.0069
PRO 1850.0063
LYS 1860.0064
THR 1870.0071
HIS 1880.0078
MET 1890.0085
THR 1900.0091
HIS 1910.0104
HIS 1920.0110
ALA 1930.0096
VAL 1940.0103
SER 1950.0096
ASP 1960.0080
HIS 1970.0064
GLU 1980.0068
ALA 1990.0073
THR 2000.0083
LEU 2010.0078
ARG 2020.0076
CYS 2030.0072
TRP 2040.0071
ALA 2050.0068
LEU 2060.0055
SER 2070.0040
PHE 2080.0046
TYR 2090.0038
PRO 2100.0050
ALA 2110.0059
GLU 2120.0069
ILE 2130.0069
THR 2140.0075
LEU 2150.0071
THR 2160.0058
TRP 2170.0052
GLN 2180.0040
ARG 2190.0034
ASP 2200.0029
GLY 2210.0025
GLU 2220.0027
ASP 2230.0031
GLN 2240.0035
THR 2250.0039
GLN 2260.0033
ASP 2270.0031
THR 2280.0033
GLU 2290.0050
LEU 2300.0057
VAL 2310.0065
GLU 2320.0049
THR 2330.0036
ARG 2340.0029
PRO 2350.0032
ALA 2360.0060
GLY 2370.0114
ASP 2380.0110
GLY 2390.0063
THR 2400.0015
PHE 2410.0028
GLN 2420.0038
LYS 2430.0050
TRP 2440.0062
ALA 2450.0076
ALA 2460.0063
VAL 2470.0054
VAL 2480.0058
VAL 2490.0047
PRO 2500.0047
SER 2510.0049
GLY 2520.0038
GLN 2530.0037
GLU 2540.0049
GLN 2550.0048
ARG 2560.0038
TYR 2570.0047
THR 2580.0056
CYS 2590.0067
HIS 2600.0069
VAL 2610.0079
GLN 2620.0088
HIS 2630.0085
GLU 2640.0092
GLY 2650.0088
LEU 2660.0109
PRO 2670.0137
LYS 2680.0131
PRO 2690.0110
LEU 2700.0088
THR 2710.0068
LEU 2720.0077
ARG 2730.0068
TRP 2740.0072
GLU 2750.0070
PRO 2760.0088
GLN 2780.0076
ARG 2790.0073
THR 2800.0086
PRO 2810.0088
LYS 2820.0092
ILE 2830.0114
GLN 2840.0080
VAL 2850.0065
TYR 2860.0064
SER 2870.0080
ARG 2880.0130
HIS 2890.0202
PRO 2900.0246
ALA 2910.0229
GLU 2920.0290
ASN 2930.0266
GLY 2940.0255
LYS 2950.0290
SER 2960.0249
ASN 2970.0197
PHE 2980.0121
LEU 2990.0060
ASN 3000.0049
CYS 3010.0064
TYR 3020.0064
VAL 3030.0085
SER 3040.0076
GLY 3050.0074
PHE 3060.0081
HIS 3070.0079
PRO 3080.0078
SER 3090.0081
ASP 3100.0091
ILE 3110.0102
GLU 3120.0115
VAL 3130.0165
ASP 3140.0179
LEU 3150.0135
LEU 3160.0181
LYS 3170.0175
ASN 3180.0256
GLY 3190.0315
GLU 3200.0309
ARG 3210.0290
ILE 3220.0228
GLU 3230.0317
LYS 3240.0309
VAL 3250.0223
GLU 3260.0212
HIS 3270.0145
SER 3280.0095
ASP 3290.0090
LEU 3300.0085
SER 3310.0067
PHE 3320.0059
SER 3330.0032
LYS 3340.0025
ASP 3350.0044
TRP 3360.0050
SER 3370.0058
PHE 3380.0075
TYR 3390.0065
LEU 3400.0077
LEU 3410.0072
TYR 3420.0094
TYR 3430.0109
THR 3440.0139
GLU 3450.0159
PHE 3460.0115
THR 3470.0131
PRO 3480.0130
THR 3490.0154
GLU 3500.0257
LYS 3510.0265
ASP 3520.0192
GLU 3530.0182
TYR 3540.0136
ALA 3550.0153
CYS 3560.0135
ARG 3570.0194
VAL 3580.0137
ASN 3590.0110
HIS 3600.0092
VAL 3610.0065
THR 3620.0074
LEU 3630.0038
SER 3640.0034
GLN 3650.0028
PRO 3660.0085
LYS 3670.0117
ILE 3680.0226
VAL 3690.0192
LYS 3700.0164
TRP 3710.0129
ASP 3720.0164
ARG 3730.0179
ASP 3740.0186
MET 3750.0145
SER 10.0030
GLN 20.0026
PHE 30.0025
ARG 40.0027
VAL 50.0027
SER 60.0051
PRO 70.0045
LEU 80.0054
ASP 90.0054
ARG 100.0036
THR 110.0018
TRP 120.0008
ASN 130.0024
LEU 140.0043
GLY 150.0054
GLU 160.0037
THR 170.0029
VAL 180.0010
GLU 190.0008
LEU 200.0021
LYS 210.0033
CYS 220.0028
GLN 230.0024
VAL 240.0022
LEU 250.0019
LEU 260.0030
SER 270.0035
ASN 280.0030
PRO 290.0024
THR 300.0023
SER 310.0026
GLY 320.0023
CYS 330.0029
SER 340.0035
TRP 350.0039
LEU 360.0054
PHE 370.0056
GLN 380.0066
PRO 390.0065
ARG 400.0069
GLY 410.0074
ALA 420.0079
ALA 430.0086
ALA 440.0083
SER 450.0089
PRO 460.0075
THR 470.0067
PHE 480.0060
LEU 490.0048
LEU 500.0041
TYR 510.0041
LEU 520.0033
SER 530.0030
GLN 540.0023
ASN 550.0016
LYS 560.0022
PRO 570.0028
LYS 580.0041
ALA 590.0045
ALA 600.0059
GLU 610.0071
GLY 620.0074
LEU 630.0060
ASP 640.0060
THR 650.0043
GLN 660.0058
ARG 670.0050
PHE 680.0037
SER 690.0022
GLY 700.0011
LYS 710.0008
ARG 720.0016
LEU 730.0021
GLY 740.0028
ASP 750.0028
THR 760.0032
PHE 770.0022
VAL 780.0013
LEU 790.0013
THR 800.0012
LEU 810.0029
SER 820.0043
ASP 830.0054
PHE 840.0041
ARG 850.0055
ARG 860.0054
GLU 870.0068
ASN 880.0050
GLU 890.0045
GLY 900.0055
TYR 910.0054
TYR 920.0043
PHE 930.0044
CYS 940.0039
SER 950.0045
ALA 960.0033
LEU 970.0031
SER 980.0033
ASN 990.0035
SER 1000.0037
ILE 1010.0044
MET 1020.0045
TYR 1030.0044
PHE 1040.0046
SER 1050.0045
HIS 1060.0058
PHE 1070.0052
VAL 1080.0039
PRO 1090.0040
VAL 1100.0027
PHE 1110.0025
LEU 1120.0014
PRO 1130.0008
ALA 1140.0016
SER 10.0089
GLN 20.0080
PHE 30.0065
ARG 40.0061
VAL 50.0049
SER 60.0056
PRO 70.0060
LEU 80.0073
ASP 90.0090
ARG 100.0073
THR 110.0058
TRP 120.0069
ASN 130.0096
LEU 140.0119
GLY 150.0142
GLU 160.0113
THR 170.0094
VAL 180.0058
GLU 190.0043
LEU 200.0022
LYS 210.0025
CYS 220.0037
GLN 230.0047
VAL 240.0056
LEU 250.0073
LEU 260.0064
SER 270.0068
ASN 280.0064
PRO 290.0055
THR 300.0050
SER 310.0054
GLY 320.0046
CYS 330.0046
SER 340.0052
TRP 350.0046
LEU 360.0063
PHE 370.0066
GLN 380.0077
PRO 390.0077
ARG 400.0082
GLY 410.0095
ALA 420.0083
ALA 430.0075
ALA 440.0082
SER 450.0076
PRO 460.0074
THR 470.0067
PHE 480.0059
LEU 490.0048
LEU 500.0041
TYR 510.0046
LEU 520.0043
SER 530.0043
GLN 540.0042
ASN 550.0042
LYS 560.0037
PRO 570.0039
LYS 580.0041
ALA 590.0046
ALA 600.0052
GLU 610.0081
GLY 620.0084
LEU 630.0079
ASP 640.0080
THR 650.0077
GLN 660.0100
ARG 670.0089
PHE 680.0066
SER 690.0044
GLY 700.0018
LYS 710.0018
ARG 720.0017
LEU 730.0022
GLY 740.0032
ASP 750.0046
THR 760.0037
PHE 770.0023
VAL 780.0014
LEU 790.0023
THR 800.0038
LEU 810.0066
SER 820.0100
ASP 830.0122
PHE 840.0095
ARG 850.0114
ARG 860.0100
GLU 870.0114
ASN 880.0080
GLU 890.0053
GLY 900.0062
TYR 910.0060
TYR 920.0052
PHE 930.0057
CYS 940.0056
SER 950.0068
ALA 960.0064
LEU 970.0064
SER 980.0064
ASN 990.0064
SER 1000.0064
ILE 1010.0075
MET 1020.0073
TYR 1030.0071
PHE 1040.0069
SER 1050.0068
HIS 1060.0079
PHE 1070.0065
VAL 1080.0045
PRO 1090.0040
VAL 1100.0026
PHE 1110.0022
LEU 1120.0049
PRO 1130.0063
ALA 1140.0046

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.