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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0858
MET 10.0147
SER 20.0109
THR 30.0135
ILE 40.0100
THR 50.0153
LYS 60.0136
ASP 70.0119
GLN 80.0105
ILE 90.0094
LEU 100.0112
GLU 110.0106
GLY 120.0142
VAL 130.0161
ALA 140.0148
ALA 150.0162
LEU 160.0078
SER 170.0100
VAL 180.0236
MET 190.0231
GLU 200.0068
ILE 210.0127
VAL 220.0171
GLU 230.0058
LEU 240.0100
ILE 250.0186
SER 260.0074
ALA 270.0113
MET 280.0156
GLU 290.0078
GLU 300.0072
LYS 310.0175
PHE 320.0113
GLY 330.0058
VAL 340.0076
SER 350.0138
ALA 360.0126
ALA 370.0130
ALA 380.0103
VAL 390.0143
ALA 400.0182
ALA 410.0329
GLY 420.0363
PRO 430.0236
ALA 440.0264
ALA 450.0245
ALA 460.0188
VAL 470.0318
GLU 480.0255
ALA 490.0117
ALA 500.0203
GLU 510.0180
GLU 520.0115
GLN 530.0056
THR 540.0066
GLU 550.0015
PHE 560.0022
ASP 570.0022
VAL 580.0021
VAL 590.0023
LEU 600.0023
ALA 610.0025
SER 620.0025
PHE 630.0029
GLY 640.0036
GLU 650.0041
ASN 660.0041
LYS 670.0036
VAL 680.0041
ALA 690.0044
VAL 700.0039
ILE 710.0036
LYS 720.0041
ALA 730.0042
VAL 740.0037
ARG 750.0038
GLY 760.0038
ALA 770.0035
THR 780.0034
GLY 790.0038
LEU 800.0035
GLY 810.0039
LEU 820.0038
LYS 830.0032
GLU 840.0030
ALA 850.0033
LYS 860.0029
ASP 870.0019
LEU 880.0021
VAL 890.0025
GLU 900.0020
SER 910.0014
ALA 920.0020
PRO 930.0021
ALA 940.0019
VAL 950.0023
LEU 960.0021
LYS 970.0019
GLU 980.0021
GLY 990.0022
VAL 1000.0020
ASN 1010.0021
LYS 1020.0021
ASP 1030.0016
GLU 1040.0012
ALA 1050.0015
GLU 1060.0028
THR 1070.0022
LEU 1080.0021
LYS 1090.0029
LYS 1100.0031
SER 1110.0035
LEU 1120.0032
GLU 1130.0036
GLU 1140.0038
ALA 1150.0035
GLY 1160.0039
ALA 1170.0033
SER 1180.0034
VAL 1190.0033
GLU 1200.0036
ILE 1210.0038
LYS 1220.0040
GLU 1230.0042
ALA 1240.0039
ALA 1250.0043
ALA 1260.0096
LYS 1270.0119
ALA 1280.0077
TYR 1290.0081
LYS 1300.0068
ILE 1310.0077
ILE 1320.0155
SER 1330.0178
LEU 1340.0229
LYS 1350.0279
TYR 1360.0212
THR 1370.0162
ARG 1380.0150
LYS 1390.0143
VAL 1400.0180
CYS 1410.0275
ILE 1420.0280
GLY 1430.0351
PRO 1440.0315
GLY 1450.0403
PRO 1460.0471
GLY 1470.0550
LYS 1480.0399
ALA 1490.0337
TYR 1500.0121
LYS 1510.0084
ILE 1520.0066
ILE 1530.0129
SER 1540.0129
LEU 1550.0197
LYS 1560.0222
TYR 1570.0170
THR 1580.0145
ARG 1590.0100
LYS 1600.0082
VAL 1610.0110
CYS 1620.0135
GLY 1630.0267
PRO 1640.0359
GLY 1650.0354
PRO 1660.0622
GLY 1670.0814
GLY 1680.0763
LYS 1690.0632
ALA 1700.0398
TYR 1710.0334
LYS 1720.0218
ILE 1730.0180
ILE 1740.0148
SER 1750.0251
LEU 1760.0229
LYS 1770.0191
TYR 1780.0174
THR 1790.0145
ARG 1800.0145
LYS 1810.0127
VAL 1820.0177
GLY 1830.0219
PRO 1840.0262
GLY 1850.0258
PRO 1860.0250
GLY 1870.0140
ILE 1880.0124
ILE 1890.0119
SER 1900.0138
LEU 1910.0193
LYS 1920.0199
TYR 1930.0167
THR 1940.0169
ARG 1950.0144
LYS 1960.0104
VAL 1970.0114
CYS 1980.0087
ILE 1990.0149
GLN 2000.0165
LEU 2010.0123
GLY 2020.0117
GLY 2030.0088
PRO 2040.0057
GLY 2050.0058
PRO 2060.0037
GLY 2070.0035
ASN 2080.0027
ILE 2090.0016
LYS 2100.0025
THR 2110.0024
ALA 2120.0024
PHE 2130.0024
HIS 2140.0024
CYS 2150.0025
TYR 2160.0037
ALA 2170.0039
ALA 2180.0037
TYR 2190.0036
MET 2200.0038
THR 2210.0039
SER 2220.0033
ILE 2230.0031
LYS 2240.0026
ALA 2250.0026
CYS 2260.0161
ASP 2270.0221
LEU 2280.0083
LYS 2290.0104
LYS 2300.0156
PRO 2310.0262
LEU 2320.0249
MET 2330.0264
GLU 2340.0269
SER 2350.0203
GLY 2360.0221
TRP 2370.0195
SER 2380.0220
ASP 2390.0201
THR 2400.0236
ALA 2410.0858
HIS 2420.0510
GLY 2430.0491
LYS 2440.0374
LYS 2450.0380
SER 2460.0145
LEU 2470.0130
PRO 2480.0165
SER 2490.0191
SER 2500.0200
SER 2510.0140
SER 2520.0201
TYR 2530.0219
SER 2540.0327
TYR 2550.0339
ARG 2560.0288
ARG 2570.0290
LYS 2580.0191
LEU 2590.0216
THR 2600.0147
ASN 2610.0205
PRO 2620.0289
ALA 2630.0177
ASN 2640.0135
LYS 2650.0132
GLU 2660.0134
GLU 2670.0220
SER 2680.0109
ILE 2690.0205
LYS 2700.0124
LYS 2710.0167
GLN 2720.0166
LYS 2730.0177
TYR 2740.0213
SER 2750.0243
TYR 2760.0169
PRO 2770.0141
TRP 2780.0105
GLN 2790.0108
THR 2800.0128
SER 2810.0190
LYS 2820.0175
CYS 2830.0139
PHE 2840.0152
ASP 2880.0228
TYR 2890.0141
GLN 2900.0167
TYR 2910.0405
CYS 2970.0020
ASN 2980.0027
PRO 2990.0058
GLY 3000.0055
LYS 3010.0014
LYS 3020.0038
ASN 3030.0021
THR 3040.0028
ILE 3050.0033
SER 3060.0043
GLY 3070.0045
TYR 3080.0054
LYS 3090.0042
ARG 3100.0017
MET 3110.0027
MET 3120.0021
ALA 3130.0010
THR 3140.0010
LYS 3150.0019
ASP 3160.0026
SER 3170.0026
PHE 3180.0026
GLN 3190.0025
SER 3200.0022
PHE 3210.0023
ASN 3220.0018
LEU 3230.0034
THR 3240.0042
GLU 3250.0060
PRO 3260.0066
HIS 3270.0086
ILE 3280.0083
THR 3290.0085
THR 3300.0085
ASN 3310.0100
LYS 3320.0136
LEU 3330.0109
GLU 3340.0105
TRP 3350.0081
ILE 3360.0075
ASP 3370.0045
PRO 3380.0039
ASP 3390.0021
GLY 3400.0030
ASN 3410.0010
THR 3420.0031
ARG 3430.0021
GLY 3440.0011
GLY 3450.0016
GLY 3460.0034
GLY 10.0010
SER 20.0011
HIS 30.0011
SER 40.0015
MET 50.0019
ARG 60.0022
TYR 70.0026
PHE 80.0031
PHE 90.0037
THR 100.0044
SER 110.0053
VAL 120.0066
SER 130.0074
ARG 140.0091
PRO 150.0098
GLY 160.0135
ARG 170.0124
GLY 180.0110
GLU 190.0095
PRO 200.0081
ARG 210.0073
PHE 220.0061
ILE 230.0048
ALA 240.0038
VAL 250.0027
GLY 260.0029
TYR 270.0020
VAL 280.0015
ASP 290.0015
ASP 300.0016
THR 310.0012
GLN 320.0011
PHE 330.0019
VAL 340.0028
ARG 350.0031
PHE 360.0044
ASP 370.0052
SER 380.0068
ASP 390.0070
ALA 400.0057
ALA 410.0060
SER 420.0059
GLN 430.0071
ARG 440.0065
MET 450.0054
GLU 460.0045
PRO 470.0038
ARG 480.0023
ALA 490.0033
PRO 500.0053
TRP 510.0054
ILE 520.0052
GLU 530.0066
GLN 540.0082
GLU 550.0081
GLY 560.0101
PRO 570.0102
GLU 580.0111
TYR 590.0091
TRP 600.0081
ASP 610.0088
GLY 620.0090
GLU 630.0073
THR 640.0073
ARG 650.0089
LYS 660.0068
VAL 670.0057
LYS 680.0069
ALA 690.0078
HIS 700.0066
SER 710.0056
GLN 720.0065
THR 730.0056
HIS 740.0053
ARG 750.0068
VAL 760.0046
ASP 770.0032
LEU 780.0045
GLY 790.0043
THR 800.0026
LEU 810.0019
ARG 820.0024
GLY 830.0014
TYR 840.0021
TYR 850.0034
ASN 860.0031
GLN 870.0030
SER 880.0028
GLU 890.0033
ALA 900.0050
GLY 910.0077
SER 920.0072
HIS 930.0060
THR 940.0053
VAL 950.0041
GLN 960.0034
ARG 970.0029
MET 980.0025
TYR 990.0021
GLY 1000.0020
CYS 1010.0020
ASP 1020.0019
VAL 1030.0015
GLY 1040.0015
SER 1050.0014
ASP 1060.0015
TRP 1070.0015
ARG 1080.0016
PHE 1090.0018
LEU 1100.0020
ARG 1110.0028
GLY 1120.0022
TYR 1130.0021
HIS 1140.0018
GLN 1150.0021
TYR 1160.0021
ALA 1170.0029
TYR 1180.0036
ASP 1190.0042
GLY 1200.0038
LYS 1210.0035
ASP 1220.0030
TYR 1230.0022
ILE 1240.0019
ALA 1250.0023
LEU 1260.0027
LYS 1270.0041
GLU 1280.0047
ASP 1290.0049
LEU 1300.0035
ARG 1310.0047
SER 1320.0044
TRP 1330.0034
THR 1340.0038
ALA 1350.0030
ALA 1360.0031
ASP 1370.0033
MET 1380.0036
ALA 1390.0026
ALA 1400.0020
GLN 1410.0030
THR 1420.0020
THR 1430.0014
LYS 1440.0028
HIS 1450.0037
LYS 1460.0036
TRP 1470.0032
GLU 1480.0050
ALA 1490.0060
ALA 1500.0054
HIS 1510.0053
VAL 1520.0031
ALA 1530.0033
GLU 1540.0041
GLN 1550.0028
LEU 1560.0014
ARG 1570.0024
ALA 1580.0021
TYR 1590.0010
LEU 1600.0017
GLU 1610.0022
GLY 1620.0019
THR 1630.0017
CYS 1640.0019
VAL 1650.0021
GLU 1660.0026
TRP 1670.0030
LEU 1680.0023
ARG 1690.0022
ARG 1700.0030
TYR 1710.0028
LEU 1720.0021
GLU 1730.0029
ASN 1740.0036
GLY 1750.0031
LYS 1760.0026
GLU 1770.0032
THR 1780.0024
LEU 1790.0012
GLN 1800.0013
ARG 1810.0026
THR 1820.0029
ASP 1830.0031
ALA 1840.0036
PRO 1850.0038
LYS 1860.0037
THR 1870.0033
HIS 1880.0030
MET 1890.0027
THR 1900.0026
HIS 1910.0024
HIS 1920.0032
ALA 1930.0035
VAL 1940.0037
SER 1950.0044
ASP 1960.0052
HIS 1970.0044
GLU 1980.0032
ALA 1990.0029
THR 2000.0024
LEU 2010.0021
ARG 2020.0025
CYS 2030.0026
TRP 2040.0031
ALA 2050.0035
LEU 2060.0031
SER 2070.0031
PHE 2080.0031
TYR 2090.0031
PRO 2100.0031
ALA 2110.0033
GLU 2120.0032
ILE 2130.0031
THR 2140.0030
LEU 2150.0028
THR 2160.0023
TRP 2170.0018
GLN 2180.0016
ARG 2190.0016
ASP 2200.0019
GLY 2210.0021
GLU 2220.0020
ASP 2230.0017
GLN 2240.0012
THR 2250.0014
GLN 2260.0011
ASP 2270.0006
THR 2280.0010
GLU 2290.0016
LEU 2300.0020
VAL 2310.0025
GLU 2320.0031
THR 2330.0038
ARG 2340.0039
PRO 2350.0046
ALA 2360.0056
GLY 2370.0072
ASP 2380.0068
GLY 2390.0055
THR 2400.0038
PHE 2410.0038
GLN 2420.0035
LYS 2430.0031
TRP 2440.0028
ALA 2450.0024
ALA 2460.0020
VAL 2470.0015
VAL 2480.0018
VAL 2490.0019
PRO 2500.0026
SER 2510.0033
GLY 2520.0034
GLN 2530.0026
GLU 2540.0023
GLN 2550.0021
ARG 2560.0017
TYR 2570.0016
THR 2580.0018
CYS 2590.0023
HIS 2600.0028
VAL 2610.0032
GLN 2620.0034
HIS 2630.0034
GLU 2640.0036
GLY 2650.0036
LEU 2660.0050
PRO 2670.0064
LYS 2680.0060
PRO 2690.0049
LEU 2700.0040
THR 2710.0028
LEU 2720.0025
ARG 2730.0020
TRP 2740.0020
GLU 2750.0020
PRO 2760.0022
GLN 2780.0032
ARG 2790.0030
THR 2800.0025
PRO 2810.0022
LYS 2820.0026
ILE 2830.0025
GLN 2840.0029
VAL 2850.0031
TYR 2860.0042
SER 2870.0052
ARG 2880.0073
HIS 2890.0089
PRO 2900.0095
ALA 2910.0084
GLU 2920.0100
ASN 2930.0089
GLY 2940.0078
LYS 2950.0093
SER 2960.0084
ASN 2970.0078
PHE 2980.0058
LEU 2990.0040
ASN 3000.0039
CYS 3010.0029
TYR 3020.0032
VAL 3030.0023
SER 3040.0029
GLY 3050.0035
PHE 3060.0032
HIS 3070.0035
PRO 3080.0042
SER 3090.0035
ASP 3100.0029
ILE 3110.0024
GLU 3120.0028
VAL 3130.0043
ASP 3140.0052
LEU 3150.0041
LEU 3160.0061
LYS 3170.0067
ASN 3180.0099
GLY 3190.0113
GLU 3200.0113
ARG 3210.0102
ILE 3220.0084
GLU 3230.0114
LYS 3240.0112
VAL 3250.0081
GLU 3260.0082
HIS 3270.0061
SER 3280.0040
ASP 3290.0034
LEU 3300.0037
SER 3310.0033
PHE 3320.0035
SER 3330.0021
LYS 3340.0023
ASP 3350.0027
TRP 3360.0025
SER 3370.0027
PHE 3380.0037
TYR 3390.0036
LEU 3400.0036
LEU 3410.0037
TYR 3420.0038
TYR 3430.0052
THR 3440.0055
GLU 3450.0059
PHE 3460.0043
THR 3470.0043
PRO 3480.0052
THR 3490.0067
GLU 3500.0111
LYS 3510.0122
ASP 3520.0088
GLU 3530.0072
TYR 3540.0050
ALA 3550.0049
CYS 3560.0035
ARG 3570.0051
VAL 3580.0030
ASN 3590.0023
HIS 3600.0018
VAL 3610.0022
THR 3620.0030
LEU 3630.0023
SER 3640.0022
GLN 3650.0026
PRO 3660.0033
LYS 3670.0043
ILE 3680.0062
VAL 3690.0053
LYS 3700.0050
TRP 3710.0047
ASP 3720.0057
ARG 3730.0066
ASP 3740.0060
MET 3750.0040
SER 10.0012
GLN 20.0010
PHE 30.0009
ARG 40.0009
VAL 50.0007
SER 60.0014
PRO 70.0012
LEU 80.0014
ASP 90.0014
ARG 100.0011
THR 110.0012
TRP 120.0004
ASN 130.0005
LEU 140.0008
GLY 150.0016
GLU 160.0006
THR 170.0005
VAL 180.0004
GLU 190.0004
LEU 200.0009
LYS 210.0010
CYS 220.0008
GLN 230.0007
VAL 240.0009
LEU 250.0011
LEU 260.0019
SER 270.0019
ASN 280.0016
PRO 290.0014
THR 300.0012
SER 310.0011
GLY 320.0010
CYS 330.0011
SER 340.0014
TRP 350.0015
LEU 360.0020
PHE 370.0021
GLN 380.0024
PRO 390.0024
ARG 400.0025
GLY 410.0025
ALA 420.0022
ALA 430.0021
ALA 440.0024
SER 450.0025
PRO 460.0024
THR 470.0022
PHE 480.0021
LEU 490.0018
LEU 500.0017
TYR 510.0016
LEU 520.0014
SER 530.0012
GLN 540.0009
ASN 550.0009
LYS 560.0012
PRO 570.0014
LYS 580.0016
ALA 590.0017
ALA 600.0020
GLU 610.0023
GLY 620.0023
LEU 630.0020
ASP 640.0020
THR 650.0016
GLN 660.0020
ARG 670.0017
PHE 680.0014
SER 690.0010
GLY 700.0008
LYS 710.0006
ARG 720.0008
LEU 730.0010
GLY 740.0013
ASP 750.0012
THR 760.0012
PHE 770.0009
VAL 780.0006
LEU 790.0007
THR 800.0008
LEU 810.0012
SER 820.0013
ASP 830.0014
PHE 840.0011
ARG 850.0015
ARG 860.0016
GLU 870.0023
ASN 880.0020
GLU 890.0020
GLY 900.0025
TYR 910.0020
TYR 920.0017
PHE 930.0016
CYS 940.0014
SER 950.0016
ALA 960.0013
LEU 970.0011
SER 980.0011
ASN 990.0011
SER 1000.0012
ILE 1010.0015
MET 1020.0015
TYR 1030.0014
PHE 1040.0015
SER 1050.0014
HIS 1060.0016
PHE 1070.0017
VAL 1080.0015
PRO 1090.0018
VAL 1100.0018
PHE 1110.0020
LEU 1120.0013
PRO 1130.0018
ALA 1140.0025
SER 10.0023
GLN 20.0025
PHE 30.0021
ARG 40.0017
VAL 50.0013
SER 60.0013
PRO 70.0011
LEU 80.0011
ASP 90.0018
ARG 100.0019
THR 110.0024
TRP 120.0028
ASN 130.0039
LEU 140.0045
GLY 150.0042
GLU 160.0031
THR 170.0021
VAL 180.0013
GLU 190.0004
LEU 200.0006
LYS 210.0012
CYS 220.0016
GLN 230.0019
VAL 240.0022
LEU 250.0025
LEU 260.0023
SER 270.0026
ASN 280.0026
PRO 290.0024
THR 300.0024
SER 310.0023
GLY 320.0021
CYS 330.0020
SER 340.0020
TRP 350.0018
LEU 360.0022
PHE 370.0021
GLN 380.0023
PRO 390.0022
ARG 400.0020
GLY 410.0024
ALA 420.0022
ALA 430.0021
ALA 440.0022
SER 450.0021
PRO 460.0022
THR 470.0021
PHE 480.0021
LEU 490.0018
LEU 500.0018
TYR 510.0020
LEU 520.0018
SER 530.0016
GLN 540.0013
ASN 550.0012
LYS 560.0016
PRO 570.0015
LYS 580.0015
ALA 590.0016
ALA 600.0017
GLU 610.0016
GLY 620.0017
LEU 630.0017
ASP 640.0020
THR 650.0023
GLN 660.0023
ARG 670.0019
PHE 680.0018
SER 690.0016
GLY 700.0018
LYS 710.0016
ARG 720.0018
LEU 730.0017
GLY 740.0020
ASP 750.0020
THR 760.0018
PHE 770.0016
VAL 780.0012
LEU 790.0011
THR 800.0008
LEU 810.0014
SER 820.0020
ASP 830.0032
PHE 840.0031
ARG 850.0041
ARG 860.0046
GLU 870.0046
ASN 880.0031
GLU 890.0025
GLY 900.0019
TYR 910.0016
TYR 920.0016
PHE 930.0018
CYS 940.0020
SER 950.0025
ALA 960.0024
LEU 970.0024
SER 980.0025
ASN 990.0025
SER 1000.0024
ILE 1010.0026
MET 1020.0025
TYR 1030.0023
PHE 1040.0022
SER 1050.0021
HIS 1060.0020
PHE 1070.0015
VAL 1080.0008
PRO 1090.0007
VAL 1100.0010
PHE 1110.0020
LEU 1120.0034
PRO 1130.0041
ALA 1140.0044

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.