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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0433
MET 10.0130
SER 20.0112
THR 30.0148
ILE 40.0104
THR 50.0163
LYS 60.0148
ASP 70.0123
GLN 80.0105
ILE 90.0118
LEU 100.0135
GLU 110.0122
GLY 120.0157
VAL 130.0174
ALA 140.0157
ALA 150.0168
LEU 160.0075
SER 170.0112
VAL 180.0251
MET 190.0252
GLU 200.0081
ILE 210.0132
VAL 220.0182
GLU 230.0069
LEU 240.0096
ILE 250.0192
SER 260.0083
ALA 270.0110
MET 280.0147
GLU 290.0076
GLU 300.0069
LYS 310.0171
PHE 320.0120
GLY 330.0070
VAL 340.0037
SER 350.0098
ALA 360.0073
ALA 370.0109
ALA 380.0105
VAL 390.0145
ALA 400.0198
ALA 410.0293
GLY 420.0303
PRO 430.0187
ALA 440.0252
ALA 450.0241
ALA 460.0200
VAL 470.0279
GLU 480.0199
ALA 490.0142
ALA 500.0221
GLU 510.0110
GLU 520.0083
GLN 530.0040
THR 540.0084
GLU 550.0112
PHE 560.0117
ASP 570.0106
VAL 580.0092
VAL 590.0090
LEU 600.0079
ALA 610.0095
SER 620.0081
PHE 630.0062
GLY 640.0055
GLU 650.0070
ASN 660.0072
LYS 670.0089
VAL 680.0114
ALA 690.0090
VAL 700.0051
ILE 710.0075
LYS 720.0099
ALA 730.0077
VAL 740.0044
ARG 750.0071
GLY 760.0088
ALA 770.0069
THR 780.0041
GLY 790.0056
LEU 800.0073
GLY 810.0122
LEU 820.0140
LYS 830.0165
GLU 840.0131
ALA 850.0082
LYS 860.0094
ASP 870.0115
LEU 880.0093
VAL 890.0074
GLU 900.0103
SER 910.0091
ALA 920.0081
PRO 930.0085
ALA 940.0085
VAL 950.0093
LEU 960.0075
LYS 970.0083
GLU 980.0097
GLY 990.0110
VAL 1000.0104
ASN 1010.0106
LYS 1020.0121
ASP 1030.0113
GLU 1040.0094
ALA 1050.0104
GLU 1060.0127
THR 1070.0107
LEU 1080.0078
LYS 1090.0096
LYS 1100.0106
SER 1110.0086
LEU 1120.0055
GLU 1130.0078
GLU 1140.0086
ALA 1150.0051
GLY 1160.0041
ALA 1170.0046
SER 1180.0076
VAL 1190.0093
GLU 1200.0126
ILE 1210.0120
LYS 1220.0115
GLU 1230.0104
ALA 1240.0100
ALA 1250.0100
ALA 1260.0050
LYS 1270.0045
ALA 1280.0042
TYR 1290.0042
LYS 1300.0043
ILE 1310.0020
ILE 1320.0044
SER 1330.0050
LEU 1340.0066
LYS 1350.0082
TYR 1360.0092
THR 1370.0096
ARG 1380.0064
LYS 1390.0098
VAL 1400.0071
CYS 1410.0121
ILE 1420.0124
GLY 1430.0149
PRO 1440.0136
GLY 1450.0171
PRO 1460.0211
GLY 1470.0274
LYS 1480.0217
ALA 1490.0184
TYR 1500.0101
LYS 1510.0082
ILE 1520.0069
ILE 1530.0088
SER 1540.0078
LEU 1550.0100
LYS 1560.0084
TYR 1570.0069
THR 1580.0059
ARG 1590.0056
LYS 1600.0051
VAL 1610.0086
CYS 1620.0095
GLY 1630.0134
PRO 1640.0154
GLY 1650.0153
PRO 1660.0275
GLY 1670.0323
GLY 1680.0298
LYS 1690.0235
ALA 1700.0154
TYR 1710.0140
LYS 1720.0103
ILE 1730.0072
ILE 1740.0056
SER 1750.0073
LEU 1760.0101
LYS 1770.0083
TYR 1780.0093
THR 1790.0082
ARG 1800.0097
LYS 1810.0098
VAL 1820.0114
GLY 1830.0115
PRO 1840.0118
GLY 1850.0102
PRO 1860.0111
GLY 1870.0077
ILE 1880.0070
ILE 1890.0076
SER 1900.0086
LEU 1910.0074
LYS 1920.0075
TYR 1930.0053
THR 1940.0052
ARG 1950.0040
LYS 1960.0021
VAL 1970.0030
CYS 1980.0016
ILE 1990.0030
GLN 2000.0020
LEU 2010.0021
GLY 2020.0038
GLY 2030.0061
PRO 2040.0069
GLY 2050.0067
PRO 2060.0071
GLY 2070.0067
ASN 2080.0062
ILE 2090.0050
LYS 2100.0046
THR 2110.0082
ALA 2120.0073
PHE 2130.0049
HIS 2140.0063
CYS 2150.0081
TYR 2160.0086
ALA 2170.0071
ALA 2180.0098
TYR 2190.0129
MET 2200.0125
THR 2210.0142
SER 2220.0156
ILE 2230.0167
LYS 2240.0181
ALA 2250.0193
CYS 2260.0167
ASP 2270.0119
LEU 2280.0069
LYS 2290.0065
LYS 2300.0041
PRO 2310.0045
LEU 2320.0024
MET 2330.0026
GLU 2340.0040
SER 2350.0049
GLY 2360.0028
TRP 2370.0023
SER 2380.0026
ASP 2390.0022
THR 2400.0027
ALA 2410.0088
HIS 2420.0054
GLY 2430.0056
LYS 2440.0048
LYS 2450.0053
SER 2460.0023
LEU 2470.0019
PRO 2480.0014
SER 2490.0012
SER 2500.0016
SER 2510.0012
SER 2520.0015
TYR 2530.0018
SER 2540.0035
TYR 2550.0040
ARG 2560.0038
ARG 2570.0037
LYS 2580.0031
LEU 2590.0027
THR 2600.0023
ASN 2610.0026
PRO 2620.0041
ALA 2630.0027
ASN 2640.0036
LYS 2650.0025
GLU 2660.0020
GLU 2670.0016
SER 2680.0017
ILE 2690.0024
LYS 2700.0022
LYS 2710.0025
GLN 2720.0024
LYS 2730.0021
TYR 2740.0026
SER 2750.0025
TYR 2760.0022
PRO 2770.0017
TRP 2780.0008
GLN 2790.0008
THR 2800.0017
SER 2810.0020
LYS 2820.0017
CYS 2830.0015
PHE 2840.0026
ASP 2880.0112
TYR 2890.0067
GLN 2900.0069
TYR 2910.0174
CYS 2970.0069
ASN 2980.0208
PRO 2990.0361
GLY 3000.0400
LYS 3010.0136
LYS 3020.0271
ASN 3030.0191
THR 3040.0238
ILE 3050.0256
SER 3060.0261
GLY 3070.0277
TYR 3080.0351
LYS 3090.0280
ARG 3100.0136
MET 3110.0211
MET 3120.0206
ALA 3130.0078
THR 3140.0159
LYS 3150.0265
ASP 3160.0320
SER 3170.0282
PHE 3180.0259
GLN 3190.0170
SER 3200.0223
PHE 3210.0219
ASN 3220.0255
LEU 3230.0190
THR 3240.0190
GLU 3250.0142
PRO 3260.0081
HIS 3270.0104
ILE 3280.0183
THR 3290.0312
THR 3300.0433
ASN 3310.0406
LYS 3320.0195
LEU 3330.0107
GLU 3340.0032
TRP 3350.0102
ILE 3360.0220
ASP 3370.0250
PRO 3380.0291
ASP 3390.0272
GLY 3400.0226
ASN 3410.0202
THR 3420.0188
ARG 3430.0069
GLY 3440.0124
GLY 3450.0071
GLY 3460.0068
GLY 10.0071
SER 20.0068
HIS 30.0058
SER 40.0056
MET 50.0045
ARG 60.0050
TYR 70.0047
PHE 80.0055
PHE 90.0054
THR 100.0061
SER 110.0071
VAL 120.0101
SER 130.0132
ARG 140.0163
PRO 150.0191
GLY 160.0288
ARG 170.0249
GLY 180.0199
GLU 190.0152
PRO 200.0123
ARG 210.0087
PHE 220.0071
ILE 230.0064
ALA 240.0047
VAL 250.0045
GLY 260.0042
TYR 270.0048
VAL 280.0051
ASP 290.0058
ASP 300.0062
THR 310.0068
GLN 320.0061
PHE 330.0051
VAL 340.0043
ARG 350.0043
PHE 360.0040
ASP 370.0060
SER 380.0058
ASP 390.0081
ALA 400.0075
ALA 410.0080
SER 420.0072
GLN 430.0041
ARG 440.0042
MET 450.0038
GLU 460.0049
PRO 470.0060
ARG 480.0071
ALA 490.0080
PRO 500.0089
TRP 510.0083
ILE 520.0068
GLU 530.0093
GLN 540.0100
GLU 550.0084
GLY 560.0118
PRO 570.0121
GLU 580.0117
TYR 590.0082
TRP 600.0072
ASP 610.0078
GLY 620.0071
GLU 630.0040
THR 640.0036
ARG 650.0050
LYS 660.0039
VAL 670.0026
LYS 680.0027
ALA 690.0050
HIS 700.0057
SER 710.0070
GLN 720.0086
THR 730.0088
HIS 740.0088
ARG 750.0109
VAL 760.0117
ASP 770.0104
LEU 780.0109
GLY 790.0121
THR 800.0113
LEU 810.0100
ARG 820.0106
GLY 830.0111
TYR 840.0096
TYR 850.0086
ASN 860.0102
GLN 870.0098
SER 880.0110
GLU 890.0125
ALA 900.0115
GLY 910.0120
SER 920.0111
HIS 930.0096
THR 940.0083
VAL 950.0072
GLN 960.0059
ARG 970.0060
MET 980.0060
TYR 990.0060
GLY 1000.0061
CYS 1010.0068
ASP 1020.0072
VAL 1030.0064
GLY 1040.0070
SER 1050.0062
ASP 1060.0060
TRP 1070.0051
ARG 1080.0065
PHE 1090.0074
LEU 1100.0090
ARG 1110.0084
GLY 1120.0079
TYR 1130.0075
HIS 1140.0070
GLN 1150.0067
TYR 1160.0061
ALA 1170.0061
TYR 1180.0069
ASP 1190.0073
GLY 1200.0065
LYS 1210.0064
ASP 1220.0057
TYR 1230.0060
ILE 1240.0062
ALA 1250.0062
LEU 1260.0076
LYS 1270.0079
GLU 1280.0083
ASP 1290.0084
LEU 1300.0080
ARG 1310.0076
SER 1320.0071
TRP 1330.0069
THR 1340.0066
ALA 1350.0065
ALA 1360.0043
ASP 1370.0051
MET 1380.0060
ALA 1390.0078
ALA 1400.0077
GLN 1410.0081
THR 1420.0098
THR 1430.0099
LYS 1440.0089
HIS 1450.0101
LYS 1460.0112
TRP 1470.0101
GLU 1480.0096
ALA 1490.0112
ALA 1500.0115
HIS 1510.0093
VAL 1520.0094
ALA 1530.0080
GLU 1540.0079
GLN 1550.0091
LEU 1560.0075
ARG 1570.0077
ALA 1580.0074
TYR 1590.0072
LEU 1600.0073
GLU 1610.0076
GLY 1620.0067
THR 1630.0056
CYS 1640.0054
VAL 1650.0056
GLU 1660.0046
TRP 1670.0036
LEU 1680.0036
ARG 1690.0034
ARG 1700.0036
TYR 1710.0040
LEU 1720.0045
GLU 1730.0046
ASN 1740.0057
GLY 1750.0066
LYS 1760.0064
GLU 1770.0077
THR 1780.0077
LEU 1790.0068
GLN 1800.0069
ARG 1810.0062
THR 1820.0051
ASP 1830.0035
ALA 1840.0032
PRO 1850.0038
LYS 1860.0049
THR 1870.0061
HIS 1880.0067
MET 1890.0077
THR 1900.0073
HIS 1910.0084
HIS 1920.0108
ALA 1930.0137
VAL 1940.0164
SER 1950.0189
ASP 1960.0197
HIS 1970.0178
GLU 1980.0153
ALA 1990.0130
THR 2000.0115
LEU 2010.0094
ARG 2020.0083
CYS 2030.0078
TRP 2040.0065
ALA 2050.0060
LEU 2060.0039
SER 2070.0036
PHE 2080.0043
TYR 2090.0053
PRO 2100.0062
ALA 2110.0059
GLU 2120.0068
ILE 2130.0063
THR 2140.0079
LEU 2150.0081
THR 2160.0096
TRP 2170.0099
GLN 2180.0103
ARG 2190.0109
ASP 2200.0114
GLY 2210.0093
GLU 2220.0089
ASP 2230.0090
GLN 2240.0083
THR 2250.0085
GLN 2260.0063
ASP 2270.0065
THR 2280.0068
GLU 2290.0074
LEU 2300.0076
VAL 2310.0051
GLU 2320.0050
THR 2330.0051
ARG 2340.0045
PRO 2350.0045
ALA 2360.0061
GLY 2370.0068
ASP 2380.0068
GLY 2390.0049
THR 2400.0051
PHE 2410.0046
GLN 2420.0046
LYS 2430.0057
TRP 2440.0063
ALA 2450.0076
ALA 2460.0097
VAL 2470.0102
VAL 2480.0117
VAL 2490.0116
PRO 2500.0130
SER 2510.0142
GLY 2520.0145
GLN 2530.0142
GLU 2540.0124
GLN 2550.0127
ARG 2560.0125
TYR 2570.0114
THR 2580.0109
CYS 2590.0099
HIS 2600.0099
VAL 2610.0078
GLN 2620.0075
HIS 2630.0055
GLU 2640.0050
GLY 2650.0023
LEU 2660.0051
PRO 2670.0070
LYS 2680.0099
PRO 2690.0104
LEU 2700.0098
THR 2710.0113
LEU 2720.0106
ARG 2730.0120
TRP 2740.0112
GLU 2750.0128
PRO 2760.0157
GLN 2780.0061
ARG 2790.0051
THR 2800.0047
PRO 2810.0036
LYS 2820.0032
ILE 2830.0023
GLN 2840.0023
VAL 2850.0025
TYR 2860.0051
SER 2870.0072
ARG 2880.0099
HIS 2890.0130
PRO 2900.0142
ALA 2910.0128
GLU 2920.0156
ASN 2930.0126
GLY 2940.0140
LYS 2950.0169
SER 2960.0160
ASN 2970.0136
PHE 2980.0097
LEU 2990.0062
ASN 3000.0048
CYS 3010.0017
TYR 3020.0012
VAL 3030.0020
SER 3040.0024
GLY 3050.0035
PHE 3060.0040
HIS 3070.0048
PRO 3080.0050
SER 3090.0047
ASP 3100.0049
ILE 3110.0050
GLU 3120.0054
VAL 3130.0058
ASP 3140.0070
LEU 3150.0052
LEU 3160.0065
LYS 3170.0066
ASN 3180.0083
GLY 3190.0120
GLU 3200.0137
ARG 3210.0138
ILE 3220.0128
GLU 3230.0187
LYS 3240.0187
VAL 3250.0125
GLU 3260.0116
HIS 3270.0064
SER 3280.0032
ASP 3290.0026
LEU 3300.0030
SER 3310.0038
PHE 3320.0047
SER 3330.0035
LYS 3340.0026
ASP 3350.0029
TRP 3360.0035
SER 3370.0042
PHE 3380.0027
TYR 3390.0020
LEU 3400.0022
LEU 3410.0034
TYR 3420.0041
TYR 3430.0075
THR 3440.0099
GLU 3450.0122
PHE 3460.0104
THR 3470.0109
PRO 3480.0076
THR 3490.0052
GLU 3500.0069
LYS 3510.0061
ASP 3520.0030
GLU 3530.0033
TYR 3540.0015
ALA 3550.0030
CYS 3560.0029
ARG 3570.0065
VAL 3580.0046
ASN 3590.0042
HIS 3600.0042
VAL 3610.0041
THR 3620.0041
LEU 3630.0032
SER 3640.0032
GLN 3650.0031
PRO 3660.0037
LYS 3670.0047
ILE 3680.0070
VAL 3690.0049
LYS 3700.0041
TRP 3710.0035
ASP 3720.0067
ARG 3730.0087
ASP 3740.0106
MET 3750.0087
SER 10.0066
GLN 20.0061
PHE 30.0050
ARG 40.0042
VAL 50.0042
SER 60.0042
PRO 70.0056
LEU 80.0070
ASP 90.0081
ARG 100.0105
THR 110.0121
TRP 120.0144
ASN 130.0185
LEU 140.0216
GLY 150.0214
GLU 160.0171
THR 170.0137
VAL 180.0108
GLU 190.0076
LEU 200.0054
LYS 210.0041
CYS 220.0035
GLN 230.0034
VAL 240.0042
LEU 250.0048
LEU 260.0042
SER 270.0042
ASN 280.0043
PRO 290.0050
THR 300.0052
SER 310.0062
GLY 320.0057
CYS 330.0056
SER 340.0056
TRP 350.0058
LEU 360.0067
PHE 370.0070
GLN 380.0081
PRO 390.0088
ARG 400.0101
GLY 410.0040
ALA 420.0040
ALA 430.0048
ALA 440.0054
SER 450.0065
PRO 460.0080
THR 470.0077
PHE 480.0075
LEU 490.0070
LEU 500.0068
TYR 510.0066
LEU 520.0063
SER 530.0069
GLN 540.0074
ASN 550.0078
LYS 560.0089
PRO 570.0075
LYS 580.0083
ALA 590.0074
ALA 600.0088
GLU 610.0115
GLY 620.0101
LEU 630.0084
ASP 640.0093
THR 650.0070
GLN 660.0117
ARG 670.0123
PHE 680.0086
SER 690.0065
GLY 700.0048
LYS 710.0044
ARG 720.0049
LEU 730.0058
GLY 740.0065
ASP 750.0053
THR 760.0043
PHE 770.0038
VAL 780.0042
LEU 790.0051
THR 800.0070
LEU 810.0119
SER 820.0147
ASP 830.0176
PHE 840.0167
ARG 850.0193
ARG 860.0206
GLU 870.0196
ASN 880.0142
GLU 890.0143
GLY 900.0128
TYR 910.0088
TYR 920.0071
PHE 930.0067
CYS 940.0060
SER 950.0068
ALA 960.0065
LEU 970.0062
SER 980.0067
ASN 990.0067
SER 1000.0059
ILE 1010.0069
MET 1020.0068
TYR 1030.0074
PHE 1040.0077
SER 1050.0084
HIS 1060.0079
PHE 1070.0080
VAL 1080.0068
PRO 1090.0090
VAL 1100.0093
PHE 1110.0131
LEU 1120.0155
PRO 1130.0151
ALA 1140.0170
SER 10.0124
GLN 20.0099
PHE 30.0078
ARG 40.0079
VAL 50.0078
SER 60.0103
PRO 70.0139
LEU 80.0166
ASP 90.0211
ARG 100.0212
THR 110.0205
TRP 120.0195
ASN 130.0217
LEU 140.0201
GLY 150.0190
GLU 160.0190
THR 170.0156
VAL 180.0127
GLU 190.0105
LEU 200.0076
LYS 210.0058
CYS 220.0049
GLN 230.0040
VAL 240.0048
LEU 250.0066
LEU 260.0082
SER 270.0092
ASN 280.0087
PRO 290.0068
THR 300.0066
SER 310.0062
GLY 320.0051
CYS 330.0044
SER 340.0056
TRP 350.0048
LEU 360.0057
PHE 370.0061
GLN 380.0087
PRO 390.0092
ARG 400.0116
GLY 410.0086
ALA 420.0095
ALA 430.0101
ALA 440.0096
SER 450.0102
PRO 460.0090
THR 470.0082
PHE 480.0072
LEU 490.0059
LEU 500.0051
TYR 510.0064
LEU 520.0053
SER 530.0053
GLN 540.0056
ASN 550.0067
LYS 560.0063
PRO 570.0058
LYS 580.0067
ALA 590.0070
ALA 600.0078
GLU 610.0076
GLY 620.0041
LEU 630.0019
ASP 640.0022
THR 650.0043
GLN 660.0085
ARG 670.0073
PHE 680.0042
SER 690.0046
GLY 700.0033
LYS 710.0038
ARG 720.0035
LEU 730.0048
GLY 740.0037
ASP 750.0007
THR 760.0020
PHE 770.0014
VAL 780.0040
LEU 790.0038
THR 800.0066
LEU 810.0089
SER 820.0119
ASP 830.0133
PHE 840.0131
ARG 850.0129
ARG 860.0156
GLU 870.0121
ASN 880.0089
GLU 890.0119
GLY 900.0109
TYR 910.0090
TYR 920.0068
PHE 930.0068
CYS 940.0059
SER 950.0074
ALA 960.0078
LEU 970.0082
SER 980.0088
ASN 990.0092
SER 1000.0090
ILE 1010.0104
MET 1020.0095
TYR 1030.0090
PHE 1040.0084
SER 1050.0079
HIS 1060.0102
PHE 1070.0102
VAL 1080.0092
PRO 1090.0117
VAL 1100.0111
PHE 1110.0161
LEU 1120.0204
PRO 1130.0256
ALA 1140.0292

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.