CNRS Nantes University US2B US2B
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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1259
MET 10.0075
SER 20.0076
THR 30.0076
ILE 40.0073
THR 50.0076
LYS 60.0074
ASP 70.0076
GLN 80.0074
ILE 90.0068
LEU 100.0069
GLU 110.0071
GLY 120.0066
VAL 130.0063
ALA 140.0066
ALA 150.0065
LEU 160.0059
SER 170.0056
VAL 180.0053
MET 190.0048
GLU 200.0050
ILE 210.0053
VAL 220.0047
GLU 230.0045
LEU 240.0050
ILE 250.0050
SER 260.0045
ALA 270.0046
MET 280.0051
GLU 290.0048
GLU 300.0044
LYS 310.0048
PHE 320.0052
GLY 330.0050
VAL 340.0053
SER 350.0050
ALA 360.0054
ALA 370.0052
ALA 380.0054
VAL 390.0060
ALA 400.0060
ALA 410.0059
GLY 420.0065
PRO 430.0065
ALA 440.0063
ALA 450.0057
ALA 460.0057
VAL 470.0055
GLU 480.0049
ALA 490.0046
ALA 500.0044
GLU 510.0042
GLU 520.0038
GLN 530.0035
THR 540.0036
GLU 550.0033
PHE 560.0029
ASP 570.0026
VAL 580.0024
VAL 590.0020
LEU 600.0018
ALA 610.0013
SER 620.0013
PHE 630.0015
GLY 640.0013
GLU 650.0015
ASN 660.0018
LYS 670.0021
VAL 680.0025
ALA 690.0023
VAL 700.0022
ILE 710.0026
LYS 720.0028
ALA 730.0026
VAL 740.0027
ARG 750.0031
GLY 760.0032
ALA 770.0031
THR 780.0033
GLY 790.0036
LEU 800.0035
GLY 810.0037
LEU 820.0035
LYS 830.0034
GLU 840.0033
ALA 850.0030
LYS 860.0028
ASP 870.0028
LEU 880.0025
VAL 890.0022
GLU 900.0022
SER 910.0021
ALA 920.0017
PRO 930.0016
ALA 940.0020
VAL 950.0023
LEU 960.0026
LYS 970.0029
GLU 980.0030
GLY 990.0033
VAL 1000.0033
ASN 1010.0035
LYS 1020.0032
ASP 1030.0033
GLU 1040.0032
ALA 1050.0028
GLU 1060.0026
THR 1070.0028
LEU 1080.0026
LYS 1090.0022
LYS 1100.0022
SER 1110.0023
LEU 1120.0021
GLU 1130.0017
GLU 1140.0018
ALA 1150.0019
GLY 1160.0015
ALA 1170.0015
SER 1180.0013
VAL 1190.0016
GLU 1200.0017
ILE 1210.0021
LYS 1220.0022
GLU 1230.0026
ALA 1240.0028
ALA 1250.0026
ALA 1260.0030
LYS 1270.0031
ALA 1280.0030
TYR 1290.0033
LYS 1300.0032
ILE 1310.0036
ILE 1320.0035
SER 1330.0037
LEU 1340.0037
LYS 1350.0039
TYR 1360.0040
THR 1370.0040
ARG 1380.0040
LYS 1390.0041
VAL 1400.0042
CYS 1410.0041
ILE 1420.0042
GLY 1430.0041
PRO 1440.0042
GLY 1450.0042
PRO 1460.0041
GLY 1470.0043
LYS 1480.0046
ALA 1490.0048
TYR 1500.0048
LYS 1510.0050
ILE 1520.0048
ILE 1530.0049
SER 1540.0048
LEU 1550.0048
LYS 1560.0048
TYR 1570.0047
THR 1580.0046
ARG 1590.0045
LYS 1600.0045
VAL 1610.0044
CYS 1620.0044
GLY 1630.0042
PRO 1640.0043
GLY 1650.0045
PRO 1660.0045
GLY 1670.0046
GLY 1680.0045
LYS 1690.0046
ALA 1700.0045
TYR 1710.0047
LYS 1720.0047
ILE 1730.0049
ILE 1740.0049
SER 1750.0051
LEU 1760.0051
LYS 1770.0052
TYR 1780.0052
THR 1790.0052
ARG 1800.0053
LYS 1810.0052
VAL 1820.0052
GLY 1830.0050
PRO 1840.0048
GLY 1850.0045
PRO 1860.0043
GLY 1870.0044
ILE 1880.0043
ILE 1890.0045
SER 1900.0044
LEU 1910.0044
LYS 1920.0043
TYR 1930.0043
THR 1940.0042
ARG 1950.0041
LYS 1960.0040
VAL 1970.0038
CYS 1980.0036
ILE 1990.0033
GLN 2000.0032
LEU 2010.0028
GLY 2020.0026
GLY 2030.0022
PRO 2040.0018
GLY 2050.0018
PRO 2060.0016
GLY 2070.0019
ASN 2080.0023
ILE 2090.0022
LYS 2100.0021
THR 2110.0025
ALA 2120.0027
PHE 2130.0025
HIS 2140.0025
CYS 2150.0030
TYR 2160.0030
ALA 2170.0028
ALA 2180.0030
TYR 2190.0034
MET 2200.0033
THR 2210.0032
SER 2220.0036
ILE 2230.0039
LYS 2240.0041
ALA 2250.0044
CYS 2260.0050
ASP 2270.0064
LEU 2280.0057
LYS 2290.0076
LYS 2300.0074
PRO 2310.0064
LEU 2320.0107
MET 2330.0102
GLU 2340.0146
SER 2350.0154
GLY 2360.0157
TRP 2370.0103
SER 2380.0057
ASP 2390.0033
THR 2400.0047
ALA 2410.0103
HIS 2420.0138
GLY 2430.0200
LYS 2440.0256
LYS 2450.0317
SER 2460.0359
LEU 2470.0376
PRO 2480.0439
SER 2490.0467
SER 2500.0479
SER 2510.0464
SER 2520.0419
TYR 2530.0355
SER 2540.0324
TYR 2550.0261
ARG 2560.0226
ARG 2570.0185
LYS 2580.0159
LEU 2590.0164
THR 2600.0160
ASN 2610.0205
PRO 2620.0217
ALA 2630.0266
ASN 2640.0228
LYS 2650.0255
GLU 2660.0226
GLU 2670.0267
SER 2680.0268
ILE 2690.0295
LYS 2700.0340
LYS 2710.0342
GLN 2720.0375
LYS 2730.0407
TYR 2740.0417
SER 2750.0470
TYR 2760.0484
PRO 2770.0547
TRP 2780.0553
GLN 2790.0560
THR 2800.0621
SER 2810.0651
LYS 2820.0681
CYS 2830.0682
PHE 2840.0741
ASP 2880.1259
TYR 2890.0951
GLN 2900.0481
TYR 2910.0411
CYS 2970.0065
ASN 2980.0065
PRO 2990.0064
GLY 3000.0066
LYS 3010.0065
LYS 3020.0063
ASN 3030.0060
THR 3040.0058
ILE 3050.0055
SER 3060.0053
GLY 3070.0052
TYR 3080.0049
LYS 3090.0049
ARG 3100.0051
MET 3110.0049
MET 3120.0046
ALA 3130.0048
THR 3140.0048
LYS 3150.0045
ASP 3160.0044
SER 3170.0047
PHE 3180.0045
GLN 3190.0043
SER 3200.0039
PHE 3210.0038
ASN 3220.0034
LEU 3230.0033
THR 3240.0030
GLU 3250.0030
PRO 3260.0033
HIS 3270.0035
ILE 3280.0036
THR 3290.0038
THR 3300.0040
ASN 3310.0043
LYS 3320.0043
LEU 3330.0040
GLU 3340.0039
TRP 3350.0036
ILE 3360.0035
ASP 3370.0036
PRO 3380.0032
ASP 3390.0035
GLY 3400.0037
ASN 3410.0041
THR 3420.0043
ARG 3430.0044
GLY 3440.0048
GLY 3450.0051
GLY 3460.0052
GLY 10.0020
SER 20.0016
HIS 30.0016
SER 40.0013
MET 50.0014
ARG 60.0011
TYR 70.0011
PHE 80.0008
PHE 90.0010
THR 100.0008
SER 110.0011
VAL 120.0011
SER 130.0015
ARG 140.0015
PRO 150.0019
GLY 160.0020
ARG 170.0017
GLY 180.0017
GLU 190.0018
PRO 200.0015
ARG 210.0011
PHE 220.0012
ILE 230.0010
ALA 240.0012
VAL 250.0011
GLY 260.0014
TYR 270.0013
VAL 280.0016
ASP 290.0014
ASP 300.0014
THR 310.0017
GLN 320.0015
PHE 330.0018
VAL 340.0018
ARG 350.0015
PHE 360.0015
ASP 370.0013
SER 380.0015
ASP 390.0013
ALA 400.0015
ALA 410.0019
SER 420.0021
GLN 430.0021
ARG 440.0022
MET 450.0021
GLU 460.0021
PRO 470.0022
ARG 480.0019
ALA 490.0022
PRO 500.0027
TRP 510.0028
ILE 520.0026
GLU 530.0028
GLN 540.0032
GLU 550.0031
GLY 560.0034
PRO 570.0033
GLU 580.0034
TYR 590.0030
TRP 600.0028
ASP 610.0030
GLY 620.0029
GLU 630.0024
THR 640.0024
ARG 650.0027
LYS 660.0024
VAL 670.0020
LYS 680.0022
ALA 690.0024
HIS 700.0019
SER 710.0018
GLN 720.0022
THR 730.0022
HIS 740.0018
ARG 750.0020
VAL 760.0023
ASP 770.0021
LEU 780.0020
GLY 790.0024
THR 800.0026
LEU 810.0023
ARG 820.0024
GLY 830.0028
TYR 840.0027
TYR 850.0027
ASN 860.0030
GLN 870.0027
SER 880.0028
GLU 890.0026
ALA 900.0024
GLY 910.0020
SER 920.0016
HIS 930.0015
THR 940.0012
VAL 950.0013
GLN 960.0009
ARG 970.0010
MET 980.0008
TYR 990.0010
GLY 1000.0012
CYS 1010.0012
ASP 1020.0012
VAL 1030.0015
GLY 1040.0016
SER 1050.0019
ASP 1060.0021
TRP 1070.0020
ARG 1080.0019
PHE 1090.0016
LEU 1100.0012
ARG 1110.0010
GLY 1120.0011
TYR 1130.0009
HIS 1140.0011
GLN 1150.0010
TYR 1160.0012
ALA 1170.0012
TYR 1180.0015
ASP 1190.0014
GLY 1200.0011
LYS 1210.0013
ASP 1220.0013
TYR 1230.0016
ILE 1240.0016
ALA 1250.0013
LEU 1260.0014
LYS 1270.0012
GLU 1280.0009
ASP 1290.0013
LEU 1300.0015
ARG 1310.0018
SER 1320.0018
TRP 1330.0018
THR 1340.0017
ALA 1350.0020
ALA 1360.0020
ASP 1370.0023
MET 1380.0027
ALA 1390.0026
ALA 1400.0022
GLN 1410.0025
THR 1420.0028
THR 1430.0024
LYS 1440.0024
HIS 1450.0028
LYS 1460.0028
TRP 1470.0025
GLU 1480.0027
ALA 1490.0031
ALA 1500.0029
HIS 1510.0027
VAL 1520.0024
ALA 1530.0021
GLU 1540.0024
GLN 1550.0024
LEU 1560.0020
ARG 1570.0019
ALA 1580.0023
TYR 1590.0021
LEU 1600.0017
GLU 1610.0018
GLY 1620.0022
THR 1630.0023
CYS 1640.0019
VAL 1650.0020
GLU 1660.0024
TRP 1670.0024
LEU 1680.0021
ARG 1690.0024
ARG 1700.0027
TYR 1710.0024
LEU 1720.0024
GLU 1730.0029
ASN 1740.0030
GLY 1750.0028
LYS 1760.0029
GLU 1770.0030
THR 1780.0026
LEU 1790.0023
GLN 1800.0025
ARG 1810.0027
THR 1820.0025
ASP 1830.0027
ALA 1840.0028
PRO 1850.0028
LYS 1860.0031
THR 1870.0032
HIS 1880.0035
MET 1890.0036
THR 1900.0037
HIS 1910.0039
HIS 1920.0039
ALA 1930.0042
VAL 1940.0040
SER 1950.0045
ASP 1960.0049
HIS 1970.0048
GLU 1980.0044
ALA 1990.0041
THR 2000.0037
LEU 2010.0036
ARG 2020.0032
CYS 2030.0031
TRP 2040.0029
ALA 2050.0027
LEU 2060.0027
SER 2070.0027
PHE 2080.0024
TYR 2090.0022
PRO 2100.0018
ALA 2110.0016
GLU 2120.0015
ILE 2130.0019
THR 2140.0020
LEU 2150.0024
THR 2160.0026
TRP 2170.0030
GLN 2180.0032
ARG 2190.0036
ASP 2200.0038
GLY 2210.0034
GLU 2220.0032
ASP 2230.0029
GLN 2240.0030
THR 2250.0026
GLN 2260.0028
ASP 2270.0031
THR 2280.0028
GLU 2290.0026
LEU 2300.0022
VAL 2310.0020
GLU 2320.0016
THR 2330.0016
ARG 2340.0017
PRO 2350.0017
ALA 2360.0021
GLY 2370.0020
ASP 2380.0024
GLY 2390.0022
THR 2400.0022
PHE 2410.0020
GLN 2420.0022
LYS 2430.0022
TRP 2440.0025
ALA 2450.0026
ALA 2460.0030
VAL 2470.0033
VAL 2480.0037
VAL 2490.0040
PRO 2500.0044
SER 2510.0047
GLY 2520.0049
GLN 2530.0045
GLU 2540.0043
GLN 2550.0044
ARG 2560.0042
TYR 2570.0038
THR 2580.0035
CYS 2590.0032
HIS 2600.0029
VAL 2610.0026
GLN 2620.0023
HIS 2630.0022
GLU 2640.0022
GLY 2650.0026
LEU 2660.0027
PRO 2670.0028
LYS 2680.0028
PRO 2690.0027
LEU 2700.0031
THR 2710.0033
LEU 2720.0036
ARG 2730.0039
TRP 2740.0041
GLU 2750.0045
PRO 2760.0045
GLN 2780.0018
ARG 2790.0014
THR 2800.0015
PRO 2810.0013
LYS 2820.0015
ILE 2830.0017
GLN 2840.0019
VAL 2850.0021
TYR 2860.0024
SER 2870.0025
ARG 2880.0025
HIS 2890.0030
PRO 2900.0033
ALA 2910.0033
GLU 2920.0037
ASN 2930.0038
GLY 2940.0038
LYS 2950.0036
SER 2960.0032
ASN 2970.0029
PHE 2980.0025
LEU 2990.0022
ASN 3000.0019
CYS 3010.0016
TYR 3020.0014
VAL 3030.0011
SER 3040.0010
GLY 3050.0010
PHE 3060.0010
HIS 3070.0009
PRO 3080.0009
SER 3090.0005
ASP 3100.0005
ILE 3110.0006
GLU 3120.0007
VAL 3130.0010
ASP 3140.0013
LEU 3150.0017
LEU 3160.0020
LYS 3170.0023
ASN 3180.0026
GLY 3190.0023
GLU 3200.0020
ARG 3210.0016
ILE 3220.0017
GLU 3230.0015
LYS 3240.0016
VAL 3250.0014
GLU 3260.0014
HIS 3270.0011
SER 3280.0011
ASP 3290.0009
LEU 3300.0004
SER 3310.0004
PHE 3320.0001
SER 3330.0003
LYS 3340.0003
ASP 3350.0007
TRP 3360.0005
SER 3370.0006
PHE 3380.0004
TYR 3390.0006
LEU 3400.0008
LEU 3410.0012
TYR 3420.0013
TYR 3430.0017
THR 3440.0020
GLU 3450.0024
PHE 3460.0027
THR 3470.0031
PRO 3480.0032
THR 3490.0035
GLU 3500.0037
LYS 3510.0036
ASP 3520.0032
GLU 3530.0029
TYR 3540.0025
ALA 3550.0022
CYS 3560.0018
ARG 3570.0016
VAL 3580.0014
ASN 3590.0012
HIS 3600.0012
VAL 3610.0014
THR 3620.0017
LEU 3630.0018
SER 3640.0022
GLN 3650.0020
PRO 3660.0018
LYS 3670.0019
ILE 3680.0021
VAL 3690.0022
LYS 3700.0026
TRP 3710.0026
ASP 3720.0030
ARG 3730.0032
ASP 3740.0035
MET 3750.0032
SER 10.0016
GLN 20.0014
PHE 30.0013
ARG 40.0011
VAL 50.0013
SER 60.0014
PRO 70.0016
LEU 80.0020
ASP 90.0022
ARG 100.0023
THR 110.0024
TRP 120.0023
ASN 130.0025
LEU 140.0026
GLY 150.0022
GLU 160.0019
THR 170.0016
VAL 180.0016
GLU 190.0013
LEU 200.0013
LYS 210.0010
CYS 220.0011
GLN 230.0008
VAL 240.0010
LEU 250.0009
LEU 260.0012
SER 270.0011
ASN 280.0016
PRO 290.0017
THR 300.0021
SER 310.0021
GLY 320.0018
CYS 330.0017
SER 340.0020
TRP 350.0019
LEU 360.0023
PHE 370.0025
GLN 380.0029
PRO 390.0031
ARG 400.0034
GLY 410.0038
ALA 420.0040
ALA 430.0039
ALA 440.0036
SER 450.0035
PRO 460.0030
THR 470.0029
PHE 480.0026
LEU 490.0023
LEU 500.0020
TYR 510.0020
LEU 520.0016
SER 530.0017
GLN 540.0017
ASN 550.0019
LYS 560.0019
PRO 570.0018
LYS 580.0022
ALA 590.0023
ALA 600.0026
GLU 610.0029
GLY 620.0029
LEU 630.0025
ASP 640.0022
THR 650.0019
GLN 660.0016
ARG 670.0017
PHE 680.0017
SER 690.0014
GLY 700.0012
LYS 710.0010
ARG 720.0009
LEU 730.0006
GLY 740.0008
ASP 750.0007
THR 760.0006
PHE 770.0009
VAL 780.0009
LEU 790.0013
THR 800.0013
LEU 810.0016
SER 820.0016
ASP 830.0019
PHE 840.0022
ARG 850.0026
ARG 860.0030
GLU 870.0030
ASN 880.0026
GLU 890.0028
GLY 900.0028
TYR 910.0025
TYR 920.0022
PHE 930.0020
CYS 940.0018
SER 950.0020
ALA 960.0019
LEU 970.0022
SER 980.0021
ASN 990.0024
SER 1000.0027
ILE 1010.0025
MET 1020.0024
TYR 1030.0021
PHE 1040.0021
SER 1050.0018
HIS 1060.0020
PHE 1070.0022
VAL 1080.0021
PRO 1090.0024
VAL 1100.0024
PHE 1110.0027
LEU 1120.0029
PRO 1130.0031
ALA 1140.0034
SER 10.0040
GLN 20.0040
PHE 30.0043
ARG 40.0046
VAL 50.0046
SER 60.0049
PRO 70.0051
LEU 80.0051
ASP 90.0054
ARG 100.0054
THR 110.0052
TRP 120.0051
ASN 130.0052
LEU 140.0050
GLY 150.0049
GLU 160.0051
THR 170.0049
VAL 180.0048
GLU 190.0048
LEU 200.0046
LYS 210.0047
CYS 220.0045
GLN 230.0046
VAL 240.0043
LEU 250.0044
LEU 260.0041
SER 270.0042
ASN 280.0040
PRO 290.0041
THR 300.0041
SER 310.0036
GLY 320.0037
CYS 330.0037
SER 340.0034
TRP 350.0036
LEU 360.0033
PHE 370.0034
GLN 380.0034
PRO 390.0036
ARG 400.0038
GLY 410.0037
ALA 420.0034
ALA 430.0030
ALA 440.0030
SER 450.0027
PRO 460.0028
THR 470.0028
PHE 480.0029
LEU 490.0032
LEU 500.0034
TYR 510.0034
LEU 520.0038
SER 530.0039
GLN 540.0041
ASN 550.0039
LYS 560.0039
PRO 570.0037
LYS 580.0032
ALA 590.0031
ALA 600.0028
GLU 610.0025
GLY 620.0026
LEU 630.0030
ASP 640.0034
THR 650.0036
GLN 660.0039
ARG 670.0040
PHE 680.0039
SER 690.0040
GLY 700.0042
LYS 710.0044
ARG 720.0045
LEU 730.0050
GLY 740.0050
ASP 750.0047
THR 760.0047
PHE 770.0044
VAL 780.0045
LEU 790.0043
THR 800.0044
LEU 810.0043
SER 820.0045
ASP 830.0046
PHE 840.0045
ARG 850.0043
ARG 860.0043
GLU 870.0039
ASN 880.0039
GLU 890.0042
GLY 900.0040
TYR 910.0039
TYR 920.0039
PHE 930.0038
CYS 940.0037
SER 950.0034
ALA 960.0034
LEU 970.0032
SER 980.0033
ASN 990.0031
SER 1000.0027
ILE 1010.0028
MET 1020.0029
TYR 1030.0033
PHE 1040.0034
SER 1050.0038
HIS 1060.0040
PHE 1070.0040
VAL 1080.0044
PRO 1090.0045
VAL 1100.0045
PHE 1110.0047
LEU 1120.0050
PRO 1130.0054
ALA 1140.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.