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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0595
MET 10.0268
SER 20.0250
THR 30.0328
ILE 40.0225
THR 50.0366
LYS 60.0334
ASP 70.0268
GLN 80.0233
ILE 90.0280
LEU 100.0315
GLU 110.0287
GLY 120.0357
VAL 130.0397
ALA 140.0371
ALA 150.0400
LEU 160.0190
SER 170.0205
VAL 180.0514
MET 190.0516
GLU 200.0158
ILE 210.0283
VAL 220.0381
GLU 230.0152
LEU 240.0190
ILE 250.0391
SER 260.0182
ALA 270.0198
MET 280.0272
GLU 290.0146
GLU 300.0111
LYS 310.0310
PHE 320.0271
GLY 330.0171
VAL 340.0079
SER 350.0088
ALA 360.0011
ALA 370.0201
ALA 380.0179
VAL 390.0260
ALA 400.0376
ALA 410.0454
GLY 420.0446
PRO 430.0245
ALA 440.0255
ALA 450.0287
ALA 460.0193
VAL 470.0348
GLU 480.0237
ALA 490.0107
ALA 500.0268
GLU 510.0123
GLU 520.0112
GLN 530.0084
THR 540.0118
GLU 550.0146
PHE 560.0160
ASP 570.0145
VAL 580.0118
VAL 590.0105
LEU 600.0080
ALA 610.0093
SER 620.0062
PHE 630.0042
GLY 640.0075
GLU 650.0132
ASN 660.0135
LYS 670.0107
VAL 680.0133
ALA 690.0134
VAL 700.0071
ILE 710.0060
LYS 720.0121
ALA 730.0131
VAL 740.0093
ARG 750.0105
GLY 760.0162
ALA 770.0171
THR 780.0161
GLY 790.0161
LEU 800.0108
GLY 810.0043
LEU 820.0043
LYS 830.0081
GLU 840.0087
ALA 850.0036
LYS 860.0061
ASP 870.0096
LEU 880.0081
VAL 890.0050
GLU 900.0093
SER 910.0092
ALA 920.0075
PRO 930.0093
ALA 940.0094
VAL 950.0115
LEU 960.0123
LYS 970.0150
GLU 980.0172
GLY 990.0190
VAL 1000.0176
ASN 1010.0173
LYS 1020.0167
ASP 1030.0165
GLU 1040.0157
ALA 1050.0149
GLU 1060.0164
THR 1070.0159
LEU 1080.0129
LYS 1090.0118
LYS 1100.0124
SER 1110.0131
LEU 1120.0082
GLU 1130.0078
GLU 1140.0112
ALA 1150.0087
GLY 1160.0066
ALA 1170.0029
SER 1180.0043
VAL 1190.0082
GLU 1200.0127
ILE 1210.0130
LYS 1220.0128
GLU 1230.0128
ALA 1240.0115
ALA 1250.0116
ALA 1260.0043
LYS 1270.0054
ALA 1280.0031
TYR 1290.0076
LYS 1300.0061
ILE 1310.0106
ILE 1320.0078
SER 1330.0091
LEU 1340.0078
LYS 1350.0103
TYR 1360.0097
THR 1370.0085
ARG 1380.0091
LYS 1390.0085
VAL 1400.0099
CYS 1410.0082
ILE 1420.0065
GLY 1430.0073
PRO 1440.0098
GLY 1450.0153
PRO 1460.0186
GLY 1470.0210
LYS 1480.0174
ALA 1490.0137
TYR 1500.0076
LYS 1510.0083
ILE 1520.0085
ILE 1530.0103
SER 1540.0112
LEU 1550.0132
LYS 1560.0117
TYR 1570.0115
THR 1580.0093
ARG 1590.0136
LYS 1600.0155
VAL 1610.0245
CYS 1620.0263
GLY 1630.0338
PRO 1640.0330
GLY 1650.0366
PRO 1660.0595
GLY 1670.0470
GLY 1680.0323
LYS 1690.0207
ALA 1700.0205
TYR 1710.0171
LYS 1720.0136
ILE 1730.0096
ILE 1740.0116
SER 1750.0116
LEU 1760.0143
LYS 1770.0124
TYR 1780.0126
THR 1790.0111
ARG 1800.0119
LYS 1810.0138
VAL 1820.0113
GLY 1830.0128
PRO 1840.0125
GLY 1850.0102
PRO 1860.0045
GLY 1870.0056
ILE 1880.0070
ILE 1890.0091
SER 1900.0119
LEU 1910.0121
LYS 1920.0097
TYR 1930.0087
THR 1940.0087
ARG 1950.0107
LYS 1960.0125
VAL 1970.0105
CYS 1980.0102
ILE 1990.0081
GLN 2000.0088
LEU 2010.0026
GLY 2020.0020
GLY 2030.0026
PRO 2040.0043
GLY 2050.0058
PRO 2060.0046
GLY 2070.0045
ASN 2080.0039
ILE 2090.0029
LYS 2100.0033
THR 2110.0051
ALA 2120.0053
PHE 2130.0046
HIS 2140.0047
CYS 2150.0057
TYR 2160.0067
ALA 2170.0062
ALA 2180.0068
TYR 2190.0078
MET 2200.0077
THR 2210.0078
SER 2220.0087
ILE 2230.0098
LYS 2240.0107
ALA 2250.0119
CYS 2260.0134
ASP 2270.0099
LEU 2280.0053
LYS 2290.0053
LYS 2300.0050
PRO 2310.0043
LEU 2320.0017
MET 2330.0032
GLU 2340.0046
SER 2350.0034
GLY 2360.0039
TRP 2370.0038
SER 2380.0040
ASP 2390.0038
THR 2400.0040
ALA 2410.0126
HIS 2420.0079
GLY 2430.0080
LYS 2440.0069
LYS 2450.0073
SER 2460.0024
LEU 2470.0021
PRO 2480.0019
SER 2490.0023
SER 2500.0033
SER 2510.0021
SER 2520.0033
TYR 2530.0032
SER 2540.0052
TYR 2550.0050
ARG 2560.0040
ARG 2570.0039
LYS 2580.0026
LEU 2590.0029
THR 2600.0019
ASN 2610.0036
PRO 2620.0060
ALA 2630.0040
ASN 2640.0034
LYS 2650.0024
GLU 2660.0027
GLU 2670.0040
SER 2680.0024
ILE 2690.0035
LYS 2700.0025
LYS 2710.0030
GLN 2720.0032
LYS 2730.0038
TYR 2740.0043
SER 2750.0056
TYR 2760.0029
PRO 2770.0026
TRP 2780.0019
GLN 2790.0024
THR 2800.0020
SER 2810.0042
LYS 2820.0039
CYS 2830.0032
PHE 2840.0022
ASP 2880.0315
TYR 2890.0196
GLN 2900.0212
TYR 2910.0532
CYS 2970.0072
ASN 2980.0131
PRO 2990.0156
GLY 3000.0187
LYS 3010.0076
LYS 3020.0116
ASN 3030.0092
THR 3040.0131
ILE 3050.0130
SER 3060.0144
GLY 3070.0150
TYR 3080.0189
LYS 3090.0139
ARG 3100.0068
MET 3110.0125
MET 3120.0115
ALA 3130.0051
THR 3140.0093
LYS 3150.0145
ASP 3160.0166
SER 3170.0144
PHE 3180.0131
GLN 3190.0076
SER 3200.0109
PHE 3210.0113
ASN 3220.0128
LEU 3230.0084
THR 3240.0094
GLU 3250.0077
PRO 3260.0032
HIS 3270.0099
ILE 3280.0127
THR 3290.0195
THR 3300.0248
ASN 3310.0231
LYS 3320.0156
LEU 3330.0092
GLU 3340.0067
TRP 3350.0051
ILE 3360.0113
ASP 3370.0123
PRO 3380.0158
ASP 3390.0150
GLY 3400.0126
ASN 3410.0104
THR 3420.0098
ARG 3430.0047
GLY 3440.0084
GLY 3450.0035
GLY 3460.0084
GLY 10.0031
SER 20.0027
HIS 30.0022
SER 40.0018
MET 50.0014
ARG 60.0017
TYR 70.0019
PHE 80.0028
PHE 90.0032
THR 100.0041
SER 110.0045
VAL 120.0069
SER 130.0087
ARG 140.0113
PRO 150.0131
GLY 160.0216
ARG 170.0186
GLY 180.0146
GLU 190.0107
PRO 200.0081
ARG 210.0055
PHE 220.0043
ILE 230.0035
ALA 240.0024
VAL 250.0024
GLY 260.0015
TYR 270.0018
VAL 280.0019
ASP 290.0023
ASP 300.0030
THR 310.0037
GLN 320.0031
PHE 330.0030
VAL 340.0024
ARG 350.0019
PHE 360.0018
ASP 370.0026
SER 380.0027
ASP 390.0038
ALA 400.0032
ALA 410.0035
SER 420.0046
GLN 430.0031
ARG 440.0042
MET 450.0037
GLU 460.0040
PRO 470.0047
ARG 480.0049
ALA 490.0060
PRO 500.0075
TRP 510.0071
ILE 520.0061
GLU 530.0081
GLN 540.0092
GLU 550.0083
GLY 560.0113
PRO 570.0114
GLU 580.0115
TYR 590.0087
TRP 600.0077
ASP 610.0085
GLY 620.0082
GLU 630.0056
THR 640.0051
ARG 650.0067
LYS 660.0048
VAL 670.0027
LYS 680.0032
ALA 690.0052
HIS 700.0045
SER 710.0044
GLN 720.0058
THR 730.0055
HIS 740.0051
ARG 750.0071
VAL 760.0065
ASP 770.0051
LEU 780.0058
GLY 790.0063
THR 800.0052
LEU 810.0045
ARG 820.0048
GLY 830.0047
TYR 840.0034
TYR 850.0025
ASN 860.0044
GLN 870.0037
SER 880.0056
GLU 890.0083
ALA 900.0066
GLY 910.0072
SER 920.0070
HIS 930.0059
THR 940.0055
VAL 950.0045
GLN 960.0039
ARG 970.0032
MET 980.0027
TYR 990.0019
GLY 1000.0014
CYS 1010.0012
ASP 1020.0016
VAL 1030.0018
GLY 1040.0022
SER 1050.0026
ASP 1060.0023
TRP 1070.0022
ARG 1080.0019
PHE 1090.0017
LEU 1100.0017
ARG 1110.0016
GLY 1120.0008
TYR 1130.0010
HIS 1140.0015
GLN 1150.0022
TYR 1160.0031
ALA 1170.0035
TYR 1180.0039
ASP 1190.0046
GLY 1200.0046
LYS 1210.0037
ASP 1220.0026
TYR 1230.0020
ILE 1240.0014
ALA 1250.0011
LEU 1260.0015
LYS 1270.0029
GLU 1280.0037
ASP 1290.0048
LEU 1300.0035
ARG 1310.0059
SER 1320.0051
TRP 1330.0031
THR 1340.0024
ALA 1350.0013
ALA 1360.0020
ASP 1370.0017
MET 1380.0013
ALA 1390.0016
ALA 1400.0016
GLN 1410.0027
THR 1420.0041
THR 1430.0042
LYS 1440.0041
HIS 1450.0062
LYS 1460.0078
TRP 1470.0070
GLU 1480.0086
ALA 1490.0110
ALA 1500.0109
HIS 1510.0103
VAL 1520.0074
ALA 1530.0055
GLU 1540.0076
GLN 1550.0072
LEU 1560.0034
ARG 1570.0034
ALA 1580.0038
TYR 1590.0026
LEU 1600.0010
GLU 1610.0014
GLY 1620.0012
THR 1630.0006
CYS 1640.0009
VAL 1650.0015
GLU 1660.0025
TRP 1670.0027
LEU 1680.0023
ARG 1690.0026
ARG 1700.0032
TYR 1710.0030
LEU 1720.0027
GLU 1730.0033
ASN 1740.0041
GLY 1750.0041
LYS 1760.0031
GLU 1770.0041
THR 1780.0041
LEU 1790.0030
GLN 1800.0026
ARG 1810.0031
THR 1820.0030
ASP 1830.0024
ALA 1840.0025
PRO 1850.0027
LYS 1860.0020
THR 1870.0029
HIS 1880.0031
MET 1890.0036
THR 1900.0030
HIS 1910.0034
HIS 1920.0031
ALA 1930.0040
VAL 1940.0041
SER 1950.0047
ASP 1960.0051
HIS 1970.0057
GLU 1980.0052
ALA 1990.0046
THR 2000.0040
LEU 2010.0042
ARG 2020.0034
CYS 2030.0037
TRP 2040.0026
ALA 2050.0027
LEU 2060.0023
SER 2070.0023
PHE 2080.0027
TYR 2090.0032
PRO 2100.0038
ALA 2110.0041
GLU 2120.0048
ILE 2130.0044
THR 2140.0053
LEU 2150.0050
THR 2160.0057
TRP 2170.0058
GLN 2180.0065
ARG 2190.0068
ASP 2200.0076
GLY 2210.0063
GLU 2220.0059
ASP 2230.0057
GLN 2240.0050
THR 2250.0053
GLN 2260.0035
ASP 2270.0036
THR 2280.0036
GLU 2290.0037
LEU 2300.0037
VAL 2310.0016
GLU 2320.0018
THR 2330.0021
ARG 2340.0023
PRO 2350.0029
ALA 2360.0030
GLY 2370.0039
ASP 2380.0040
GLY 2390.0042
THR 2400.0033
PHE 2410.0028
GLN 2420.0023
LYS 2430.0025
TRP 2440.0026
ALA 2450.0034
ALA 2460.0040
VAL 2470.0046
VAL 2480.0046
VAL 2490.0052
PRO 2500.0056
SER 2510.0063
GLY 2520.0074
GLN 2530.0076
GLU 2540.0068
GLN 2550.0078
ARG 2560.0078
TYR 2570.0068
THR 2580.0067
CYS 2590.0060
HIS 2600.0064
VAL 2610.0055
GLN 2620.0058
HIS 2630.0048
GLU 2640.0047
GLY 2650.0032
LEU 2660.0049
PRO 2670.0066
LYS 2680.0081
PRO 2690.0080
LEU 2700.0067
THR 2710.0075
LEU 2720.0066
ARG 2730.0075
TRP 2740.0067
GLU 2750.0080
PRO 2760.0100
GLN 2780.0036
ARG 2790.0033
THR 2800.0030
PRO 2810.0028
LYS 2820.0028
ILE 2830.0027
GLN 2840.0030
VAL 2850.0032
TYR 2860.0036
SER 2870.0040
ARG 2880.0044
HIS 2890.0057
PRO 2900.0065
ALA 2910.0066
GLU 2920.0077
ASN 2930.0086
GLY 2940.0089
LYS 2950.0083
SER 2960.0070
ASN 2970.0059
PHE 2980.0044
LEU 2990.0040
ASN 3000.0035
CYS 3010.0030
TYR 3020.0028
VAL 3030.0021
SER 3040.0027
GLY 3050.0034
PHE 3060.0033
HIS 3070.0037
PRO 3080.0048
SER 3090.0043
ASP 3100.0036
ILE 3110.0030
GLU 3120.0021
VAL 3130.0009
ASP 3140.0019
LEU 3150.0032
LEU 3160.0043
LYS 3170.0058
ASN 3180.0070
GLY 3190.0057
GLU 3200.0058
ARG 3210.0046
ILE 3220.0047
GLU 3230.0050
LYS 3240.0041
VAL 3250.0028
GLU 3260.0015
HIS 3270.0009
SER 3280.0025
ASP 3290.0024
LEU 3300.0027
SER 3310.0031
PHE 3320.0036
SER 3330.0028
LYS 3340.0026
ASP 3350.0025
TRP 3360.0026
SER 3370.0028
PHE 3380.0030
TYR 3390.0026
LEU 3400.0018
LEU 3410.0019
TYR 3420.0017
TYR 3430.0028
THR 3440.0037
GLU 3450.0048
PHE 3460.0057
THR 3470.0068
PRO 3480.0070
THR 3490.0085
GLU 3500.0101
LYS 3510.0104
ASP 3520.0087
GLU 3530.0068
TYR 3540.0055
ALA 3550.0045
CYS 3560.0032
ARG 3570.0022
VAL 3580.0025
ASN 3590.0029
HIS 3600.0036
VAL 3610.0044
THR 3620.0049
LEU 3630.0052
SER 3640.0060
GLN 3650.0050
PRO 3660.0039
LYS 3670.0039
ILE 3680.0039
VAL 3690.0041
LYS 3700.0043
TRP 3710.0046
ASP 3720.0046
ARG 3730.0044
ASP 3740.0029
MET 3750.0027
SER 10.0038
GLN 20.0035
PHE 30.0029
ARG 40.0026
VAL 50.0026
SER 60.0025
PRO 70.0032
LEU 80.0039
ASP 90.0041
ARG 100.0053
THR 110.0059
TRP 120.0074
ASN 130.0097
LEU 140.0118
GLY 150.0120
GLU 160.0091
THR 170.0074
VAL 180.0059
GLU 190.0040
LEU 200.0029
LYS 210.0018
CYS 220.0017
GLN 230.0016
VAL 240.0023
LEU 250.0027
LEU 260.0021
SER 270.0019
ASN 280.0021
PRO 290.0024
THR 300.0027
SER 310.0034
GLY 320.0028
CYS 330.0027
SER 340.0027
TRP 350.0029
LEU 360.0035
PHE 370.0039
GLN 380.0047
PRO 390.0052
ARG 400.0061
GLY 410.0023
ALA 420.0020
ALA 430.0025
ALA 440.0031
SER 450.0036
PRO 460.0042
THR 470.0039
PHE 480.0036
LEU 490.0034
LEU 500.0032
TYR 510.0030
LEU 520.0027
SER 530.0030
GLN 540.0032
ASN 550.0032
LYS 560.0037
PRO 570.0030
LYS 580.0035
ALA 590.0032
ALA 600.0042
GLU 610.0060
GLY 620.0056
LEU 630.0049
ASP 640.0057
THR 650.0042
GLN 660.0071
ARG 670.0074
PHE 680.0051
SER 690.0035
GLY 700.0021
LYS 710.0015
ARG 720.0016
LEU 730.0021
GLY 740.0025
ASP 750.0020
THR 760.0014
PHE 770.0012
VAL 780.0018
LEU 790.0026
THR 800.0037
LEU 810.0068
SER 820.0085
ASP 830.0102
PHE 840.0095
ARG 850.0113
ARG 860.0117
GLU 870.0117
ASN 880.0085
GLU 890.0083
GLY 900.0077
TYR 910.0052
TYR 920.0041
PHE 930.0038
CYS 940.0033
SER 950.0036
ALA 960.0033
LEU 970.0033
SER 980.0036
ASN 990.0037
SER 1000.0035
ILE 1010.0039
MET 1020.0038
TYR 1030.0041
PHE 1040.0042
SER 1050.0046
HIS 1060.0047
PHE 1070.0048
VAL 1080.0043
PRO 1090.0054
VAL 1100.0055
PHE 1110.0073
LEU 1120.0082
PRO 1130.0074
ALA 1140.0086
SER 10.0070
GLN 20.0054
PHE 30.0045
ARG 40.0050
VAL 50.0050
SER 60.0068
PRO 70.0088
LEU 80.0103
ASP 90.0129
ARG 100.0128
THR 110.0121
TRP 120.0113
ASN 130.0123
LEU 140.0111
GLY 150.0104
GLU 160.0108
THR 170.0089
VAL 180.0075
GLU 190.0065
LEU 200.0050
LYS 210.0041
CYS 220.0034
GLN 230.0029
VAL 240.0026
LEU 250.0037
LEU 260.0043
SER 270.0046
ASN 280.0042
PRO 290.0033
THR 300.0030
SER 310.0031
GLY 320.0025
CYS 330.0022
SER 340.0029
TRP 350.0026
LEU 360.0030
PHE 370.0035
GLN 380.0050
PRO 390.0054
ARG 400.0068
GLY 410.0050
ALA 420.0056
ALA 430.0060
ALA 440.0055
SER 450.0058
PRO 460.0050
THR 470.0045
PHE 480.0039
LEU 490.0032
LEU 500.0027
TYR 510.0031
LEU 520.0027
SER 530.0028
GLN 540.0028
ASN 550.0031
LYS 560.0031
PRO 570.0027
LYS 580.0033
ALA 590.0034
ALA 600.0039
GLU 610.0040
GLY 620.0023
LEU 630.0013
ASP 640.0013
THR 650.0020
GLN 660.0044
ARG 670.0039
PHE 680.0024
SER 690.0025
GLY 700.0019
LYS 710.0022
ARG 720.0017
LEU 730.0029
GLY 740.0019
ASP 750.0010
THR 760.0021
PHE 770.0014
VAL 780.0029
LEU 790.0027
THR 800.0041
LEU 810.0051
SER 820.0066
ASP 830.0072
PHE 840.0073
ARG 850.0070
ARG 860.0087
GLU 870.0068
ASN 880.0051
GLU 890.0069
GLY 900.0064
TYR 910.0054
TYR 920.0040
PHE 930.0039
CYS 940.0032
SER 950.0038
ALA 960.0040
LEU 970.0042
SER 980.0045
ASN 990.0047
SER 1000.0047
ILE 1010.0054
MET 1020.0049
TYR 1030.0046
PHE 1040.0044
SER 1050.0041
HIS 1060.0059
PHE 1070.0061
VAL 1080.0057
PRO 1090.0071
VAL 1100.0067
PHE 1110.0094
LEU 1120.0117
PRO 1130.0148
ALA 1140.0168

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.