CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0551
MET 10.0131
SER 20.0143
THR 30.0190
ILE 40.0129
THR 50.0204
LYS 60.0193
ASP 70.0150
GLN 80.0130
ILE 90.0174
LEU 100.0189
GLU 110.0166
GLY 120.0205
VAL 130.0223
ALA 140.0200
ALA 150.0213
LEU 160.0091
SER 170.0137
VAL 180.0306
MET 190.0314
GLU 200.0106
ILE 210.0162
VAL 220.0225
GLU 230.0098
LEU 240.0102
ILE 250.0223
SER 260.0106
ALA 270.0122
MET 280.0149
GLU 290.0074
GLU 300.0075
LYS 310.0194
PHE 320.0166
GLY 330.0121
VAL 340.0052
SER 350.0043
ALA 360.0065
ALA 370.0111
ALA 380.0091
VAL 390.0142
ALA 400.0202
ALA 410.0196
GLY 420.0174
PRO 430.0104
ALA 440.0147
ALA 450.0163
ALA 460.0177
VAL 470.0140
GLU 480.0192
ALA 490.0227
ALA 500.0196
GLU 510.0071
GLU 520.0060
GLN 530.0016
THR 540.0065
GLU 550.0100
PHE 560.0095
ASP 570.0092
VAL 580.0089
VAL 590.0084
LEU 600.0081
ALA 610.0093
SER 620.0084
PHE 630.0061
GLY 640.0075
GLU 650.0068
ASN 660.0066
LYS 670.0038
VAL 680.0046
ALA 690.0069
VAL 700.0053
ILE 710.0032
LYS 720.0067
ALA 730.0075
VAL 740.0043
ARG 750.0036
GLY 760.0065
ALA 770.0064
THR 780.0039
GLY 790.0031
LEU 800.0056
GLY 810.0095
LEU 820.0092
LYS 830.0111
GLU 840.0099
ALA 850.0049
LYS 860.0049
ASP 870.0077
LEU 880.0074
VAL 890.0057
GLU 900.0069
SER 910.0072
ALA 920.0072
PRO 930.0073
ALA 940.0077
VAL 950.0087
LEU 960.0081
LYS 970.0092
GLU 980.0100
GLY 990.0112
VAL 1000.0111
ASN 1010.0114
LYS 1020.0111
ASP 1030.0112
GLU 1040.0108
ALA 1050.0102
GLU 1060.0114
THR 1070.0100
LEU 1080.0091
LYS 1090.0104
LYS 1100.0108
SER 1110.0097
LEU 1120.0090
GLU 1130.0115
GLU 1140.0118
ALA 1150.0096
GLY 1160.0091
ALA 1170.0087
SER 1180.0099
VAL 1190.0102
GLU 1200.0114
ILE 1210.0078
LYS 1220.0071
GLU 1230.0066
ALA 1240.0075
ALA 1250.0071
ALA 1260.0036
LYS 1270.0042
ALA 1280.0031
TYR 1290.0074
LYS 1300.0067
ILE 1310.0180
ILE 1320.0150
SER 1330.0164
LEU 1340.0137
LYS 1350.0154
TYR 1360.0097
THR 1370.0109
ARG 1380.0118
LYS 1390.0177
VAL 1400.0214
CYS 1410.0258
ILE 1420.0222
GLY 1430.0203
PRO 1440.0168
GLY 1450.0187
PRO 1460.0310
GLY 1470.0434
LYS 1480.0331
ALA 1490.0191
TYR 1500.0108
LYS 1510.0127
ILE 1520.0114
ILE 1530.0116
SER 1540.0110
LEU 1550.0117
LYS 1560.0091
TYR 1570.0135
THR 1580.0152
ARG 1590.0225
LYS 1600.0262
VAL 1610.0367
CYS 1620.0359
GLY 1630.0443
PRO 1640.0386
GLY 1650.0359
PRO 1660.0437
GLY 1670.0155
GLY 1680.0228
LYS 1690.0207
ALA 1700.0328
TYR 1710.0158
LYS 1720.0202
ILE 1730.0131
ILE 1740.0181
SER 1750.0118
LEU 1760.0143
LYS 1770.0113
TYR 1780.0130
THR 1790.0121
ARG 1800.0151
LYS 1810.0171
VAL 1820.0119
GLY 1830.0151
PRO 1840.0157
GLY 1850.0155
PRO 1860.0134
GLY 1870.0125
ILE 1880.0152
ILE 1890.0141
SER 1900.0164
LEU 1910.0094
LYS 1920.0079
TYR 1930.0093
THR 1940.0143
ARG 1950.0191
LYS 1960.0230
VAL 1970.0184
CYS 1980.0156
ILE 1990.0108
GLN 2000.0091
LEU 2010.0033
GLY 2020.0061
GLY 2030.0080
PRO 2040.0099
GLY 2050.0127
PRO 2060.0062
GLY 2070.0072
ASN 2080.0069
ILE 2090.0054
LYS 2100.0070
THR 2110.0075
ALA 2120.0084
PHE 2130.0072
HIS 2140.0058
CYS 2150.0068
TYR 2160.0071
ALA 2170.0060
ALA 2180.0039
TYR 2190.0032
MET 2200.0035
THR 2210.0019
SER 2220.0014
ILE 2230.0020
LYS 2240.0029
ALA 2250.0039
CYS 2260.0068
ASP 2270.0064
LEU 2280.0045
LYS 2290.0021
LYS 2300.0071
PRO 2310.0052
LEU 2320.0039
MET 2330.0045
GLU 2340.0089
SER 2350.0078
GLY 2360.0055
TRP 2370.0059
SER 2380.0064
ASP 2390.0071
THR 2400.0077
ALA 2410.0112
HIS 2420.0088
GLY 2430.0077
LYS 2440.0073
LYS 2450.0066
SER 2460.0032
LEU 2470.0024
PRO 2480.0024
SER 2490.0030
SER 2500.0038
SER 2510.0023
SER 2520.0040
TYR 2530.0045
SER 2540.0068
TYR 2550.0071
ARG 2560.0057
ARG 2570.0054
LYS 2580.0040
LEU 2590.0035
THR 2600.0024
ASN 2610.0048
PRO 2620.0089
ALA 2630.0056
ASN 2640.0065
LYS 2650.0045
GLU 2660.0035
GLU 2670.0041
SER 2680.0031
ILE 2690.0043
LYS 2700.0034
LYS 2710.0045
GLN 2720.0041
LYS 2730.0043
TYR 2740.0047
SER 2750.0055
TYR 2760.0045
PRO 2770.0041
TRP 2780.0027
GLN 2790.0029
THR 2800.0043
SER 2810.0039
LYS 2820.0045
CYS 2830.0033
PHE 2840.0065
ASP 2880.0329
TYR 2890.0207
GLN 2900.0218
TYR 2910.0551
CYS 2970.0046
ASN 2980.0041
PRO 2990.0032
GLY 3000.0048
LYS 3010.0037
LYS 3020.0043
ASN 3030.0039
THR 3040.0047
ILE 3050.0040
SER 3060.0036
GLY 3070.0044
TYR 3080.0036
LYS 3090.0037
ARG 3100.0036
MET 3110.0041
MET 3120.0060
ALA 3130.0074
THR 3140.0089
LYS 3150.0090
ASP 3160.0125
SER 3170.0114
PHE 3180.0072
GLN 3190.0052
SER 3200.0036
PHE 3210.0029
ASN 3220.0034
LEU 3230.0031
THR 3240.0031
GLU 3250.0028
PRO 3260.0025
HIS 3270.0033
ILE 3280.0040
THR 3290.0045
THR 3300.0055
ASN 3310.0056
LYS 3320.0052
LEU 3330.0046
GLU 3340.0041
TRP 3350.0037
ILE 3360.0039
ASP 3370.0036
PRO 3380.0041
ASP 3390.0039
GLY 3400.0035
ASN 3410.0031
THR 3420.0029
ARG 3430.0018
GLY 3440.0029
GLY 3450.0016
GLY 3460.0034
GLY 10.0060
SER 20.0062
HIS 30.0047
SER 40.0055
MET 50.0056
ARG 60.0076
TYR 70.0088
PHE 80.0107
PHE 90.0121
THR 100.0140
SER 110.0152
VAL 120.0169
SER 130.0177
ARG 140.0201
PRO 150.0213
GLY 160.0282
ARG 170.0253
GLY 180.0225
GLU 190.0206
PRO 200.0188
ARG 210.0190
PHE 220.0168
ILE 230.0147
ALA 240.0126
VAL 250.0107
GLY 260.0098
TYR 270.0074
VAL 280.0051
ASP 290.0060
ASP 300.0057
THR 310.0034
GLN 320.0058
PHE 330.0065
VAL 340.0097
ARG 350.0121
PHE 360.0147
ASP 370.0164
SER 380.0194
ASP 390.0197
ALA 400.0177
ALA 410.0211
SER 420.0203
GLN 430.0218
ARG 440.0195
MET 450.0162
GLU 460.0145
PRO 470.0113
ARG 480.0081
ALA 490.0063
PRO 500.0088
TRP 510.0092
ILE 520.0102
GLU 530.0142
GLN 540.0159
GLU 550.0156
GLY 560.0197
PRO 570.0221
GLU 580.0224
TYR 590.0185
TRP 600.0192
ASP 610.0209
GLY 620.0196
GLU 630.0173
THR 640.0193
ARG 650.0215
LYS 660.0167
VAL 670.0157
LYS 680.0183
ALA 690.0191
HIS 700.0172
SER 710.0138
GLN 720.0146
THR 730.0138
HIS 740.0140
ARG 750.0157
VAL 760.0104
ASP 770.0100
LEU 780.0121
GLY 790.0108
THR 800.0088
LEU 810.0069
ARG 820.0074
GLY 830.0048
TYR 840.0050
TYR 850.0070
ASN 860.0036
GLN 870.0029
SER 880.0030
GLU 890.0068
ALA 900.0084
GLY 910.0173
SER 920.0169
HIS 930.0151
THR 940.0145
VAL 950.0125
GLN 960.0115
ARG 970.0100
MET 980.0090
TYR 990.0076
GLY 1000.0065
CYS 1010.0058
ASP 1020.0060
VAL 1030.0052
GLY 1040.0066
SER 1050.0060
ASP 1060.0065
TRP 1070.0047
ARG 1080.0063
PHE 1090.0065
LEU 1100.0078
ARG 1110.0081
GLY 1120.0066
TYR 1130.0074
HIS 1140.0071
GLN 1150.0093
TYR 1160.0084
ALA 1170.0098
TYR 1180.0110
ASP 1190.0122
GLY 1200.0118
LYS 1210.0103
ASP 1220.0093
TYR 1230.0078
ILE 1240.0070
ALA 1250.0073
LEU 1260.0086
LYS 1270.0125
GLU 1280.0133
ASP 1290.0138
LEU 1300.0100
ARG 1310.0127
SER 1320.0126
TRP 1330.0105
THR 1340.0124
ALA 1350.0110
ALA 1360.0110
ASP 1370.0106
MET 1380.0103
ALA 1390.0078
ALA 1400.0071
GLN 1410.0099
THR 1420.0067
THR 1430.0045
LYS 1440.0082
HIS 1450.0102
LYS 1460.0089
TRP 1470.0080
GLU 1480.0136
ALA 1490.0163
ALA 1500.0144
HIS 1510.0148
VAL 1520.0087
ALA 1530.0086
GLU 1540.0116
GLN 1550.0092
LEU 1560.0036
ARG 1570.0062
ALA 1580.0061
TYR 1590.0033
LEU 1600.0035
GLU 1610.0044
GLY 1620.0028
THR 1630.0016
CYS 1640.0026
VAL 1650.0026
GLU 1660.0009
TRP 1670.0019
LEU 1680.0015
ARG 1690.0016
ARG 1700.0029
TYR 1710.0030
LEU 1720.0020
GLU 1730.0047
ASN 1740.0061
GLY 1750.0052
LYS 1760.0050
GLU 1770.0062
THR 1780.0036
LEU 1790.0020
GLN 1800.0045
ARG 1810.0066
THR 1820.0079
ASP 1830.0079
ALA 1840.0094
PRO 1850.0096
LYS 1860.0094
THR 1870.0089
HIS 1880.0088
MET 1890.0084
THR 1900.0086
HIS 1910.0082
HIS 1920.0084
ALA 1930.0073
VAL 1940.0063
SER 1950.0056
ASP 1960.0059
HIS 1970.0041
GLU 1980.0032
ALA 1990.0053
THR 2000.0060
LEU 2010.0064
ARG 2020.0072
CYS 2030.0075
TRP 2040.0086
ALA 2050.0092
LEU 2060.0088
SER 2070.0078
PHE 2080.0082
TYR 2090.0079
PRO 2100.0082
ALA 2110.0093
GLU 2120.0096
ILE 2130.0092
THR 2140.0090
LEU 2150.0083
THR 2160.0058
TRP 2170.0039
GLN 2180.0016
ARG 2190.0019
ASP 2200.0038
GLY 2210.0018
GLU 2220.0028
ASP 2230.0031
GLN 2240.0027
THR 2250.0047
GLN 2260.0044
ASP 2270.0030
THR 2280.0029
GLU 2290.0051
LEU 2300.0064
VAL 2310.0073
GLU 2320.0077
THR 2330.0080
ARG 2340.0076
PRO 2350.0078
ALA 2360.0084
GLY 2370.0086
ASP 2380.0086
GLY 2390.0083
THR 2400.0081
PHE 2410.0083
GLN 2420.0081
LYS 2430.0080
TRP 2440.0078
ALA 2450.0077
ALA 2460.0058
VAL 2470.0034
VAL 2480.0029
VAL 2490.0021
PRO 2500.0025
SER 2510.0061
GLY 2520.0083
GLN 2530.0064
GLU 2540.0065
GLN 2550.0084
ARG 2560.0055
TYR 2570.0040
THR 2580.0051
CYS 2590.0066
HIS 2600.0073
VAL 2610.0093
GLN 2620.0104
HIS 2630.0105
GLU 2640.0114
GLY 2650.0109
LEU 2660.0139
PRO 2670.0174
LYS 2680.0161
PRO 2690.0131
LEU 2700.0102
THR 2710.0073
LEU 2720.0089
ARG 2730.0083
TRP 2740.0088
GLU 2750.0110
PRO 2760.0156
GLN 2780.0075
ARG 2790.0073
THR 2800.0066
PRO 2810.0063
LYS 2820.0060
ILE 2830.0051
GLN 2840.0051
VAL 2850.0043
TYR 2860.0050
SER 2870.0056
ARG 2880.0084
HIS 2890.0093
PRO 2900.0097
ALA 2910.0078
GLU 2920.0092
ASN 2930.0086
GLY 2940.0063
LYS 2950.0063
SER 2960.0046
ASN 2970.0057
PHE 2980.0052
LEU 2990.0043
ASN 3000.0053
CYS 3010.0051
TYR 3020.0064
VAL 3030.0071
SER 3040.0081
GLY 3050.0090
PHE 3060.0092
HIS 3070.0101
PRO 3080.0119
SER 3090.0116
ASP 3100.0103
ILE 3110.0081
GLU 3120.0072
VAL 3130.0074
ASP 3140.0067
LEU 3150.0047
LEU 3160.0053
LYS 3170.0065
ASN 3180.0099
GLY 3190.0106
GLU 3200.0117
ARG 3210.0110
ILE 3220.0098
GLU 3230.0114
LYS 3240.0122
VAL 3250.0094
GLU 3260.0111
HIS 3270.0107
SER 3280.0096
ASP 3290.0097
LEU 3300.0106
SER 3310.0102
PHE 3320.0107
SER 3330.0051
LYS 3340.0060
ASP 3350.0077
TRP 3360.0076
SER 3370.0075
PHE 3380.0102
TYR 3390.0095
LEU 3400.0089
LEU 3410.0083
TYR 3420.0077
TYR 3430.0073
THR 3440.0063
GLU 3450.0052
PHE 3460.0022
THR 3470.0007
PRO 3480.0038
THR 3490.0083
GLU 3500.0136
LYS 3510.0152
ASP 3520.0103
GLU 3530.0062
TYR 3540.0028
ALA 3550.0017
CYS 3560.0021
ARG 3570.0040
VAL 3580.0040
ASN 3590.0046
HIS 3600.0054
VAL 3610.0055
THR 3620.0048
LEU 3630.0005
SER 3640.0029
GLN 3650.0041
PRO 3660.0040
LYS 3670.0018
ILE 3680.0019
VAL 3690.0011
LYS 3700.0016
TRP 3710.0028
ASP 3720.0043
ARG 3730.0065
ASP 3740.0068
MET 3750.0068
SER 10.0040
GLN 20.0034
PHE 30.0030
ARG 40.0031
VAL 50.0025
SER 60.0051
PRO 70.0042
LEU 80.0038
ASP 90.0032
ARG 100.0023
THR 110.0018
TRP 120.0015
ASN 130.0018
LEU 140.0028
GLY 150.0025
GLU 160.0018
THR 170.0022
VAL 180.0028
GLU 190.0038
LEU 200.0047
LYS 210.0052
CYS 220.0040
GLN 230.0032
VAL 240.0030
LEU 250.0026
LEU 260.0050
SER 270.0054
ASN 280.0046
PRO 290.0037
THR 300.0033
SER 310.0062
GLY 320.0060
CYS 330.0064
SER 340.0067
TRP 350.0069
LEU 360.0078
PHE 370.0069
GLN 380.0071
PRO 390.0061
ARG 400.0055
GLY 410.0070
ALA 420.0084
ALA 430.0104
ALA 440.0098
SER 450.0115
PRO 460.0095
THR 470.0090
PHE 480.0091
LEU 490.0080
LEU 500.0082
TYR 510.0087
LEU 520.0083
SER 530.0080
GLN 540.0074
ASN 550.0069
LYS 560.0086
PRO 570.0086
LYS 580.0091
ALA 590.0088
ALA 600.0095
GLU 610.0105
GLY 620.0093
LEU 630.0079
ASP 640.0065
THR 650.0069
GLN 660.0050
ARG 670.0046
PHE 680.0055
SER 690.0060
GLY 700.0068
LYS 710.0063
ARG 720.0066
LEU 730.0066
GLY 740.0069
ASP 750.0062
THR 760.0065
PHE 770.0062
VAL 780.0055
LEU 790.0053
THR 800.0048
LEU 810.0041
SER 820.0031
ASP 830.0028
PHE 840.0030
ARG 850.0040
ARG 860.0041
GLU 870.0052
ASN 880.0046
GLU 890.0040
GLY 900.0048
TYR 910.0056
TYR 920.0054
PHE 930.0059
CYS 940.0061
SER 950.0068
ALA 960.0058
LEU 970.0054
SER 980.0054
ASN 990.0053
SER 1000.0060
ILE 1010.0076
MET 1020.0073
TYR 1030.0068
PHE 1040.0066
SER 1050.0060
HIS 1060.0055
PHE 1070.0050
VAL 1080.0040
PRO 1090.0038
VAL 1100.0030
PHE 1110.0025
LEU 1120.0017
PRO 1130.0016
ALA 1140.0018
SER 10.0136
GLN 20.0128
PHE 30.0106
ARG 40.0095
VAL 50.0076
SER 60.0069
PRO 70.0059
LEU 80.0077
ASP 90.0086
ARG 100.0060
THR 110.0051
TRP 120.0077
ASN 130.0122
LEU 140.0157
GLY 150.0176
GLU 160.0130
THR 170.0100
VAL 180.0056
GLU 190.0025
LEU 200.0025
LYS 210.0045
CYS 220.0069
GLN 230.0083
VAL 240.0100
LEU 250.0121
LEU 260.0112
SER 270.0121
ASN 280.0114
PRO 290.0099
THR 300.0091
SER 310.0091
GLY 320.0080
CYS 330.0082
SER 340.0087
TRP 350.0082
LEU 360.0098
PHE 370.0098
GLN 380.0105
PRO 390.0103
ARG 400.0102
GLY 410.0093
ALA 420.0066
ALA 430.0053
ALA 440.0081
SER 450.0080
PRO 460.0101
THR 470.0096
PHE 480.0092
LEU 490.0084
LEU 500.0080
TYR 510.0081
LEU 520.0073
SER 530.0068
GLN 540.0058
ASN 550.0057
LYS 560.0062
PRO 570.0067
LYS 580.0071
ALA 590.0076
ALA 600.0085
GLU 610.0104
GLY 620.0105
LEU 630.0100
ASP 640.0099
THR 650.0096
GLN 660.0114
ARG 670.0102
PHE 680.0083
SER 690.0057
GLY 700.0044
LYS 710.0038
ARG 720.0048
LEU 730.0047
GLY 740.0067
ASP 750.0083
THR 760.0069
PHE 770.0055
VAL 780.0032
LEU 790.0039
THR 800.0038
LEU 810.0074
SER 820.0111
ASP 830.0148
PHE 840.0121
ARG 850.0156
ARG 860.0148
GLU 870.0165
ASN 880.0116
GLU 890.0085
GLY 900.0093
TYR 910.0084
TYR 920.0078
PHE 930.0088
CYS 940.0092
SER 950.0109
ALA 960.0104
LEU 970.0105
SER 980.0105
ASN 990.0105
SER 1000.0108
ILE 1010.0117
MET 1020.0114
TYR 1030.0111
PHE 1040.0109
SER 1050.0105
HIS 1060.0110
PHE 1070.0091
VAL 1080.0063
PRO 1090.0053
VAL 1100.0037
PHE 1110.0035
LEU 1120.0070
PRO 1130.0077
ALA 1140.0062

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.