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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 92  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0771
MET 10.0402
SER 20.0527
THR 30.0402
ILE 40.0366
THR 50.0372
LYS 60.0523
ASP 70.0236
GLN 80.0306
ILE 90.0608
LEU 100.0452
GLU 110.0320
GLY 120.0482
VAL 130.0397
ALA 140.0245
ALA 150.0413
LEU 160.0213
SER 170.0207
VAL 180.0297
MET 190.0330
GLU 200.0146
ILE 210.0237
VAL 220.0280
GLU 230.0254
LEU 240.0255
ILE 250.0312
SER 260.0247
ALA 270.0356
MET 280.0318
GLU 290.0103
GLU 300.0082
LYS 310.0318
PHE 320.0559
GLY 330.0529
VAL 340.0645
SER 350.0463
ALA 360.0408
ALA 370.0231
ALA 380.0117
VAL 390.0255
ALA 400.0319
ALA 410.0574
GLY 420.0771
PRO 430.0669
ALA 440.0731
ALA 450.0535
ALA 460.0304
VAL 470.0616
GLU 480.0506
ALA 490.0313
ALA 500.0409
GLU 510.0274
GLU 520.0163
GLN 530.0036
THR 540.0135
GLU 550.0154
PHE 560.0161
ASP 570.0149
VAL 580.0126
VAL 590.0112
LEU 600.0089
ALA 610.0098
SER 620.0052
PHE 630.0033
GLY 640.0076
GLU 650.0142
ASN 660.0158
LYS 670.0132
VAL 680.0180
ALA 690.0180
VAL 700.0109
ILE 710.0102
LYS 720.0174
ALA 730.0175
VAL 740.0123
ARG 750.0144
GLY 760.0196
ALA 770.0191
THR 780.0169
GLY 790.0180
LEU 800.0110
GLY 810.0076
LEU 820.0104
LYS 830.0079
GLU 840.0028
ALA 850.0029
LYS 860.0052
ASP 870.0069
LEU 880.0052
VAL 890.0022
GLU 900.0081
SER 910.0085
ALA 920.0070
PRO 930.0092
ALA 940.0093
VAL 950.0122
LEU 960.0134
LYS 970.0157
GLU 980.0175
GLY 990.0190
VAL 1000.0179
ASN 1010.0163
LYS 1020.0162
ASP 1030.0159
GLU 1040.0155
ALA 1050.0153
GLU 1060.0183
THR 1070.0173
LEU 1080.0143
LYS 1090.0144
LYS 1100.0157
SER 1110.0162
LEU 1120.0110
GLU 1130.0113
GLU 1140.0144
ALA 1150.0113
GLY 1160.0087
ALA 1170.0055
SER 1180.0066
VAL 1190.0105
GLU 1200.0146
ILE 1210.0139
LYS 1220.0135
GLU 1230.0127
ALA 1240.0122
ALA 1250.0122
ALA 1260.0037
LYS 1270.0037
ALA 1280.0037
TYR 1290.0037
LYS 1300.0037
ILE 1310.0012
ILE 1320.0013
SER 1330.0018
LEU 1340.0020
LYS 1350.0027
TYR 1360.0023
THR 1370.0024
ARG 1380.0020
LYS 1390.0028
VAL 1400.0033
CYS 1410.0043
ILE 1420.0043
GLY 1430.0035
PRO 1440.0032
GLY 1450.0030
PRO 1460.0062
GLY 1470.0071
LYS 1480.0057
ALA 1490.0031
TYR 1500.0043
LYS 1510.0025
ILE 1520.0023
ILE 1530.0015
SER 1540.0017
LEU 1550.0014
LYS 1560.0018
TYR 1570.0021
THR 1580.0024
ARG 1590.0027
LYS 1600.0031
VAL 1610.0030
CYS 1620.0031
GLY 1630.0039
PRO 1640.0043
GLY 1650.0045
PRO 1660.0086
GLY 1670.0084
GLY 1680.0073
LYS 1690.0055
ALA 1700.0043
TYR 1710.0038
LYS 1720.0033
ILE 1730.0028
ILE 1740.0025
SER 1750.0022
LEU 1760.0019
LYS 1770.0015
TYR 1780.0007
THR 1790.0013
ARG 1800.0017
LYS 1810.0029
VAL 1820.0028
GLY 1830.0027
PRO 1840.0024
GLY 1850.0020
PRO 1860.0030
GLY 1870.0024
ILE 1880.0025
ILE 1890.0020
SER 1900.0020
LEU 1910.0008
LYS 1920.0015
TYR 1930.0016
THR 1940.0024
ARG 1950.0027
LYS 1960.0024
VAL 1970.0017
CYS 1980.0013
ILE 1990.0021
GLN 2000.0028
LEU 2010.0029
GLY 2020.0020
GLY 2030.0015
PRO 2040.0011
GLY 2050.0015
PRO 2060.0009
GLY 2070.0010
ASN 2080.0011
ILE 2090.0010
LYS 2100.0011
THR 2110.0016
ALA 2120.0014
PHE 2130.0014
HIS 2140.0014
CYS 2150.0013
TYR 2160.0018
ALA 2170.0013
ALA 2180.0018
TYR 2190.0020
MET 2200.0014
THR 2210.0019
SER 2220.0024
ILE 2230.0028
LYS 2240.0032
ALA 2250.0036
CYS 2260.0113
ASP 2270.0107
LEU 2280.0053
LYS 2290.0051
LYS 2300.0085
PRO 2310.0042
LEU 2320.0022
MET 2330.0011
GLU 2340.0042
SER 2350.0046
GLY 2360.0029
TRP 2370.0032
SER 2380.0032
ASP 2390.0038
THR 2400.0039
ALA 2410.0063
HIS 2420.0051
GLY 2430.0044
LYS 2440.0042
LYS 2450.0040
SER 2460.0017
LEU 2470.0012
PRO 2480.0011
SER 2490.0017
SER 2500.0025
SER 2510.0014
SER 2520.0022
TYR 2530.0020
SER 2540.0032
TYR 2550.0029
ARG 2560.0018
ARG 2570.0017
LYS 2580.0010
LEU 2590.0011
THR 2600.0006
ASN 2610.0030
PRO 2620.0057
ALA 2630.0039
ASN 2640.0035
LYS 2650.0022
GLU 2660.0025
GLU 2670.0032
SER 2680.0023
ILE 2690.0026
LYS 2700.0022
LYS 2710.0023
GLN 2720.0026
LYS 2730.0030
TYR 2740.0031
SER 2750.0044
TYR 2760.0021
PRO 2770.0022
TRP 2780.0018
GLN 2790.0017
THR 2800.0020
SER 2810.0028
LYS 2820.0027
CYS 2830.0019
PHE 2840.0024
ASP 2880.0012
TYR 2890.0007
GLN 2900.0010
TYR 2910.0022
CYS 2970.0018
ASN 2980.0028
PRO 2990.0030
GLY 3000.0039
LYS 3010.0024
LYS 3020.0029
ASN 3030.0023
THR 3040.0029
ILE 3050.0029
SER 3060.0028
GLY 3070.0029
TYR 3080.0038
LYS 3090.0031
ARG 3100.0020
MET 3110.0030
MET 3120.0036
ALA 3130.0031
THR 3140.0039
LYS 3150.0047
ASP 3160.0059
SER 3170.0045
PHE 3180.0031
GLN 3190.0014
SER 3200.0025
PHE 3210.0031
ASN 3220.0034
LEU 3230.0028
THR 3240.0031
GLU 3250.0027
PRO 3260.0021
HIS 3270.0024
ILE 3280.0018
THR 3290.0023
THR 3300.0025
ASN 3310.0024
LYS 3320.0021
LEU 3330.0019
GLU 3340.0026
TRP 3350.0029
ILE 3360.0038
ASP 3370.0041
PRO 3380.0048
ASP 3390.0049
GLY 3400.0050
ASN 3410.0045
THR 3420.0052
ARG 3430.0040
GLY 3440.0055
GLY 3450.0046
GLY 3460.0066
GLY 10.0037
SER 20.0033
HIS 30.0025
SER 40.0021
MET 50.0015
ARG 60.0008
TYR 70.0010
PHE 80.0014
PHE 90.0019
THR 100.0023
SER 110.0024
VAL 120.0024
SER 130.0027
ARG 140.0033
PRO 150.0039
GLY 160.0064
ARG 170.0055
GLY 180.0046
GLU 190.0038
PRO 200.0031
ARG 210.0031
PHE 220.0027
ILE 230.0024
ALA 240.0020
VAL 250.0017
GLY 260.0015
TYR 270.0012
VAL 280.0012
ASP 290.0016
ASP 300.0012
THR 310.0009
GLN 320.0009
PHE 330.0011
VAL 340.0016
ARG 350.0022
PHE 360.0027
ASP 370.0028
SER 380.0034
ASP 390.0034
ALA 400.0031
ALA 410.0043
SER 420.0042
GLN 430.0043
ARG 440.0038
MET 450.0031
GLU 460.0029
PRO 470.0024
ARG 480.0021
ALA 490.0020
PRO 500.0028
TRP 510.0030
ILE 520.0025
GLU 530.0035
GLN 540.0039
GLU 550.0032
GLY 560.0036
PRO 570.0041
GLU 580.0037
TYR 590.0030
TRP 600.0035
ASP 610.0037
GLY 620.0033
GLU 630.0029
THR 640.0035
ARG 650.0038
LYS 660.0029
VAL 670.0028
LYS 680.0032
ALA 690.0033
HIS 700.0030
SER 710.0023
GLN 720.0025
THR 730.0024
HIS 740.0023
ARG 750.0026
VAL 760.0018
ASP 770.0019
LEU 780.0018
GLY 790.0018
THR 800.0020
LEU 810.0015
ARG 820.0016
GLY 830.0019
TYR 840.0019
TYR 850.0018
ASN 860.0035
GLN 870.0032
SER 880.0034
GLU 890.0039
ALA 900.0037
GLY 910.0024
SER 920.0023
HIS 930.0020
THR 940.0020
VAL 950.0020
GLN 960.0018
ARG 970.0015
MET 980.0011
TYR 990.0010
GLY 1000.0010
CYS 1010.0022
ASP 1020.0026
VAL 1030.0030
GLY 1040.0036
SER 1050.0040
ASP 1060.0043
TRP 1070.0035
ARG 1080.0036
PHE 1090.0034
LEU 1100.0038
ARG 1110.0024
GLY 1120.0020
TYR 1130.0016
HIS 1140.0015
GLN 1150.0015
TYR 1160.0011
ALA 1170.0013
TYR 1180.0013
ASP 1190.0015
GLY 1200.0016
LYS 1210.0011
ASP 1220.0009
TYR 1230.0006
ILE 1240.0004
ALA 1250.0005
LEU 1260.0012
LYS 1270.0015
GLU 1280.0021
ASP 1290.0026
LEU 1300.0023
ARG 1310.0025
SER 1320.0018
TRP 1330.0009
THR 1340.0004
ALA 1350.0005
ALA 1360.0012
ASP 1370.0012
MET 1380.0014
ALA 1390.0011
ALA 1400.0009
GLN 1410.0009
THR 1420.0012
THR 1430.0008
LYS 1440.0006
HIS 1450.0011
LYS 1460.0018
TRP 1470.0017
GLU 1480.0016
ALA 1490.0021
ALA 1500.0026
HIS 1510.0030
VAL 1520.0026
ALA 1530.0025
GLU 1540.0031
GLN 1550.0031
LEU 1560.0025
ARG 1570.0029
ALA 1580.0030
TYR 1590.0024
LEU 1600.0023
GLU 1610.0030
GLY 1620.0026
THR 1630.0019
CYS 1640.0019
VAL 1650.0023
GLU 1660.0021
TRP 1670.0015
LEU 1680.0019
ARG 1690.0025
ARG 1700.0022
TYR 1710.0020
LEU 1720.0027
GLU 1730.0033
ASN 1740.0031
GLY 1750.0030
LYS 1760.0037
GLU 1770.0036
THR 1780.0025
LEU 1790.0021
GLN 1800.0031
ARG 1810.0028
THR 1820.0032
ASP 1830.0029
ALA 1840.0033
PRO 1850.0033
LYS 1860.0034
THR 1870.0032
HIS 1880.0028
MET 1890.0025
THR 1900.0021
HIS 1910.0018
HIS 1920.0011
ALA 1930.0004
VAL 1940.0007
SER 1950.0012
ASP 1960.0016
HIS 1970.0017
GLU 1980.0009
ALA 1990.0006
THR 2000.0011
LEU 2010.0018
ARG 2020.0021
CYS 2030.0026
TRP 2040.0028
ALA 2050.0033
LEU 2060.0030
SER 2070.0026
PHE 2080.0030
TYR 2090.0030
PRO 2100.0033
ALA 2110.0041
GLU 2120.0045
ILE 2130.0042
THR 2140.0042
LEU 2150.0036
THR 2160.0028
TRP 2170.0021
GLN 2180.0018
ARG 2190.0016
ASP 2200.0023
GLY 2210.0016
GLU 2220.0009
ASP 2230.0010
GLN 2240.0007
THR 2250.0011
GLN 2260.0005
ASP 2270.0005
THR 2280.0012
GLU 2290.0019
LEU 2300.0025
VAL 2310.0026
GLU 2320.0028
THR 2330.0029
ARG 2340.0029
PRO 2350.0031
ALA 2360.0027
GLY 2370.0032
ASP 2380.0028
GLY 2390.0034
THR 2400.0030
PHE 2410.0030
GLN 2420.0028
LYS 2430.0028
TRP 2440.0027
ALA 2450.0027
ALA 2460.0021
VAL 2470.0012
VAL 2480.0005
VAL 2490.0008
PRO 2500.0013
SER 2510.0022
GLY 2520.0032
GLN 2530.0028
GLU 2540.0026
GLN 2550.0036
ARG 2560.0027
TYR 2570.0022
THR 2580.0029
CYS 2590.0032
HIS 2600.0038
VAL 2610.0042
GLN 2620.0049
HIS 2630.0048
GLU 2640.0053
GLY 2650.0048
LEU 2660.0060
PRO 2670.0077
LYS 2680.0074
PRO 2690.0062
LEU 2700.0047
THR 2710.0044
LEU 2720.0044
ARG 2730.0040
TRP 2740.0036
GLU 2750.0045
PRO 2760.0067
GLN 2780.0019
ARG 2790.0020
THR 2800.0020
PRO 2810.0022
LYS 2820.0022
ILE 2830.0030
GLN 2840.0029
VAL 2850.0029
TYR 2860.0028
SER 2870.0030
ARG 2880.0032
HIS 2890.0031
PRO 2900.0030
ALA 2910.0029
GLU 2920.0029
ASN 2930.0033
GLY 2940.0038
LYS 2950.0040
SER 2960.0042
ASN 2970.0040
PHE 2980.0036
LEU 2990.0034
ASN 3000.0034
CYS 3010.0033
TYR 3020.0034
VAL 3030.0025
SER 3040.0025
GLY 3050.0023
PHE 3060.0022
HIS 3070.0022
PRO 3080.0028
SER 3090.0027
ASP 3100.0029
ILE 3110.0026
GLU 3120.0026
VAL 3130.0038
ASP 3140.0040
LEU 3150.0040
LEU 3160.0039
LYS 3170.0041
ASN 3180.0042
GLY 3190.0043
GLU 3200.0046
ARG 3210.0048
ILE 3220.0048
GLU 3230.0042
LYS 3240.0045
VAL 3250.0039
GLU 3260.0040
HIS 3270.0036
SER 3280.0024
ASP 3290.0022
LEU 3300.0022
SER 3310.0022
PHE 3320.0023
SER 3330.0011
LYS 3340.0011
ASP 3350.0014
TRP 3360.0015
SER 3370.0015
PHE 3380.0025
TYR 3390.0026
LEU 3400.0028
LEU 3410.0030
TYR 3420.0030
TYR 3430.0038
THR 3440.0041
GLU 3450.0043
PHE 3460.0041
THR 3470.0040
PRO 3480.0039
THR 3490.0037
GLU 3500.0035
LYS 3510.0039
ASP 3520.0042
GLU 3530.0039
TYR 3540.0039
ALA 3550.0037
CYS 3560.0038
ARG 3570.0037
VAL 3580.0033
ASN 3590.0037
HIS 3600.0037
VAL 3610.0040
THR 3620.0035
LEU 3630.0050
SER 3640.0055
GLN 3650.0054
PRO 3660.0048
LYS 3670.0044
ILE 3680.0040
VAL 3690.0037
LYS 3700.0035
TRP 3710.0033
ASP 3720.0030
ARG 3730.0027
ASP 3740.0017
MET 3750.0020
SER 10.0012
GLN 20.0011
PHE 30.0010
ARG 40.0009
VAL 50.0008
SER 60.0015
PRO 70.0015
LEU 80.0016
ASP 90.0016
ARG 100.0017
THR 110.0019
TRP 120.0021
ASN 130.0024
LEU 140.0029
GLY 150.0026
GLU 160.0018
THR 170.0016
VAL 180.0016
GLU 190.0015
LEU 200.0017
LYS 210.0011
CYS 220.0009
GLN 230.0009
VAL 240.0009
LEU 250.0009
LEU 260.0013
SER 270.0017
ASN 280.0016
PRO 290.0012
THR 300.0012
SER 310.0017
GLY 320.0016
CYS 330.0017
SER 340.0018
TRP 350.0019
LEU 360.0023
PHE 370.0023
GLN 380.0024
PRO 390.0023
ARG 400.0024
GLY 410.0015
ALA 420.0016
ALA 430.0020
ALA 440.0021
SER 450.0026
PRO 460.0025
THR 470.0024
PHE 480.0024
LEU 490.0023
LEU 500.0023
TYR 510.0023
LEU 520.0022
SER 530.0022
GLN 540.0021
ASN 550.0020
LYS 560.0024
PRO 570.0023
LYS 580.0024
ALA 590.0023
ALA 600.0025
GLU 610.0029
GLY 620.0027
LEU 630.0023
ASP 640.0020
THR 650.0022
GLN 660.0018
ARG 670.0018
PHE 680.0019
SER 690.0020
GLY 700.0021
LYS 710.0018
ARG 720.0018
LEU 730.0017
GLY 740.0017
ASP 750.0015
THR 760.0017
PHE 770.0017
VAL 780.0017
LEU 790.0017
THR 800.0017
LEU 810.0018
SER 820.0017
ASP 830.0020
PHE 840.0022
ARG 850.0028
ARG 860.0029
GLU 870.0032
ASN 880.0025
GLU 890.0025
GLY 900.0027
TYR 910.0022
TYR 920.0021
PHE 930.0021
CYS 940.0020
SER 950.0021
ALA 960.0012
LEU 970.0011
SER 980.0014
ASN 990.0014
SER 1000.0012
ILE 1010.0017
MET 1020.0017
TYR 1030.0018
PHE 1040.0019
SER 1050.0019
HIS 1060.0021
PHE 1070.0021
VAL 1080.0019
PRO 1090.0019
VAL 1100.0019
PHE 1110.0024
LEU 1120.0024
PRO 1130.0021
ALA 1140.0023
SER 10.0034
GLN 20.0031
PHE 30.0027
ARG 40.0025
VAL 50.0021
SER 60.0022
PRO 70.0022
LEU 80.0028
ASP 90.0032
ARG 100.0026
THR 110.0020
TRP 120.0018
ASN 130.0023
LEU 140.0026
GLY 150.0030
GLU 160.0024
THR 170.0018
VAL 180.0010
GLU 190.0008
LEU 200.0011
LYS 210.0014
CYS 220.0018
GLN 230.0021
VAL 240.0023
LEU 250.0028
LEU 260.0026
SER 270.0028
ASN 280.0026
PRO 290.0021
THR 300.0019
SER 310.0017
GLY 320.0015
CYS 330.0016
SER 340.0018
TRP 350.0018
LEU 360.0021
PHE 370.0020
GLN 380.0022
PRO 390.0021
ARG 400.0021
GLY 410.0023
ALA 420.0022
ALA 430.0021
ALA 440.0024
SER 450.0025
PRO 460.0024
THR 470.0022
PHE 480.0021
LEU 490.0018
LEU 500.0017
TYR 510.0017
LEU 520.0016
SER 530.0014
GLN 540.0012
ASN 550.0012
LYS 560.0013
PRO 570.0014
LYS 580.0015
ALA 590.0016
ALA 600.0017
GLU 610.0017
GLY 620.0015
LEU 630.0014
ASP 640.0015
THR 650.0018
GLN 660.0021
ARG 670.0017
PHE 680.0014
SER 690.0012
GLY 700.0012
LYS 710.0010
ARG 720.0012
LEU 730.0012
GLY 740.0015
ASP 750.0018
THR 760.0017
PHE 770.0014
VAL 780.0009
LEU 790.0009
THR 800.0006
LEU 810.0011
SER 820.0017
ASP 830.0023
PHE 840.0017
ARG 850.0021
ARG 860.0017
GLU 870.0021
ASN 880.0015
GLU 890.0008
GLY 900.0015
TYR 910.0018
TYR 920.0017
PHE 930.0020
CYS 940.0021
SER 950.0024
ALA 960.0023
LEU 970.0022
SER 980.0021
ASN 990.0020
SER 1000.0022
ILE 1010.0027
MET 1020.0027
TYR 1030.0026
PHE 1040.0026
SER 1050.0025
HIS 1060.0028
PHE 1070.0023
VAL 1080.0017
PRO 1090.0016
VAL 1100.0009
PHE 1110.0008
LEU 1120.0014
PRO 1130.0024
ALA 1140.0024

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.