CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 94  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1135
MET 10.1135
SER 20.0862
THR 30.0249
ILE 40.0566
THR 50.0670
LYS 60.0707
ASP 70.0267
GLN 80.0410
ILE 90.0513
LEU 100.0102
GLU 110.0597
GLY 120.0731
VAL 130.0419
ALA 140.0780
ALA 150.1123
LEU 160.0510
SER 170.0262
VAL 180.0479
MET 190.0460
GLU 200.0255
ILE 210.0088
VAL 220.0321
GLU 230.0391
LEU 240.0236
ILE 250.0061
SER 260.0107
ALA 270.0078
MET 280.0083
GLU 290.0060
GLU 300.0097
LYS 310.0215
PHE 320.0271
GLY 330.0293
VAL 340.0165
SER 350.0174
ALA 360.0466
ALA 370.0521
ALA 380.0209
VAL 390.0377
ALA 400.0461
ALA 410.0162
GLY 420.0423
PRO 430.0525
ALA 440.0566
ALA 450.0351
ALA 460.0305
VAL 470.0442
GLU 480.0291
ALA 490.0360
ALA 500.0449
GLU 510.0199
GLU 520.0126
GLN 530.0047
THR 540.0092
GLU 550.0079
PHE 560.0069
ASP 570.0065
VAL 580.0059
VAL 590.0054
LEU 600.0049
ALA 610.0046
SER 620.0017
PHE 630.0026
GLY 640.0048
GLU 650.0080
ASN 660.0093
LYS 670.0076
VAL 680.0105
ALA 690.0111
VAL 700.0078
ILE 710.0072
LYS 720.0109
ALA 730.0110
VAL 740.0086
ARG 750.0100
GLY 760.0116
ALA 770.0108
THR 780.0102
GLY 790.0116
LEU 800.0086
GLY 810.0082
LEU 820.0080
LYS 830.0045
GLU 840.0032
ALA 850.0049
LYS 860.0034
ASP 870.0014
LEU 880.0022
VAL 890.0016
GLU 900.0026
SER 910.0030
ALA 920.0025
PRO 930.0040
ALA 940.0045
VAL 950.0066
LEU 960.0071
LYS 970.0077
GLU 980.0081
GLY 990.0084
VAL 1000.0082
ASN 1010.0072
LYS 1020.0071
ASP 1030.0069
GLU 1040.0069
ALA 1050.0068
GLU 1060.0091
THR 1070.0085
LEU 1080.0073
LYS 1090.0079
LYS 1100.0089
SER 1110.0095
LEU 1120.0072
GLU 1130.0075
GLU 1140.0091
ALA 1150.0076
GLY 1160.0066
ALA 1170.0049
SER 1180.0047
VAL 1190.0060
GLU 1200.0073
ILE 1210.0066
LYS 1220.0064
GLU 1230.0063
ALA 1240.0059
ALA 1250.0061
ALA 1260.0032
LYS 1270.0033
ALA 1280.0031
TYR 1290.0033
LYS 1300.0032
ILE 1310.0010
ILE 1320.0008
SER 1330.0005
LEU 1340.0012
LYS 1350.0017
TYR 1360.0015
THR 1370.0014
ARG 1380.0012
LYS 1390.0011
VAL 1400.0010
CYS 1410.0018
ILE 1420.0021
GLY 1430.0023
PRO 1440.0025
GLY 1450.0031
PRO 1460.0036
GLY 1470.0032
LYS 1480.0022
ALA 1490.0018
TYR 1500.0012
LYS 1510.0009
ILE 1520.0009
ILE 1530.0010
SER 1540.0011
LEU 1550.0014
LYS 1560.0015
TYR 1570.0013
THR 1580.0014
ARG 1590.0013
LYS 1600.0014
VAL 1610.0013
CYS 1620.0025
GLY 1630.0044
PRO 1640.0048
GLY 1650.0048
PRO 1660.0076
GLY 1670.0032
GLY 1680.0057
LYS 1690.0031
ALA 1700.0031
TYR 1710.0015
LYS 1720.0011
ILE 1730.0016
ILE 1740.0012
SER 1750.0019
LEU 1760.0015
LYS 1770.0014
TYR 1780.0012
THR 1790.0012
ARG 1800.0012
LYS 1810.0010
VAL 1820.0011
GLY 1830.0015
PRO 1840.0019
GLY 1850.0021
PRO 1860.0015
GLY 1870.0010
ILE 1880.0011
ILE 1890.0011
SER 1900.0014
LEU 1910.0012
LYS 1920.0013
TYR 1930.0012
THR 1940.0013
ARG 1950.0012
LYS 1960.0008
VAL 1970.0011
CYS 1980.0014
ILE 1990.0024
GLN 2000.0032
LEU 2010.0028
GLY 2020.0022
GLY 2030.0013
PRO 2040.0007
GLY 2050.0012
PRO 2060.0013
GLY 2070.0014
ASN 2080.0015
ILE 2090.0013
LYS 2100.0012
THR 2110.0014
ALA 2120.0012
PHE 2130.0011
HIS 2140.0011
CYS 2150.0010
TYR 2160.0010
ALA 2170.0008
ALA 2180.0011
TYR 2190.0010
MET 2200.0007
THR 2210.0011
SER 2220.0013
ILE 2230.0013
LYS 2240.0014
ALA 2250.0014
CYS 2260.0059
ASP 2270.0059
LEU 2280.0031
LYS 2290.0030
LYS 2300.0047
PRO 2310.0023
LEU 2320.0017
MET 2330.0006
GLU 2340.0016
SER 2350.0020
GLY 2360.0011
TRP 2370.0013
SER 2380.0012
ASP 2390.0016
THR 2400.0018
ALA 2410.0028
HIS 2420.0023
GLY 2430.0019
LYS 2440.0017
LYS 2450.0017
SER 2460.0009
LEU 2470.0006
PRO 2480.0008
SER 2490.0015
SER 2500.0013
SER 2510.0007
SER 2520.0008
TYR 2530.0007
SER 2540.0012
TYR 2550.0009
ARG 2560.0003
ARG 2570.0003
LYS 2580.0002
LEU 2590.0002
THR 2600.0001
ASN 2610.0017
PRO 2620.0032
ALA 2630.0022
ASN 2640.0018
LYS 2650.0011
GLU 2660.0014
GLU 2670.0017
SER 2680.0014
ILE 2690.0013
LYS 2700.0013
LYS 2710.0010
GLN 2720.0014
LYS 2730.0016
TYR 2740.0015
SER 2750.0024
TYR 2760.0010
PRO 2770.0012
TRP 2780.0010
GLN 2790.0008
THR 2800.0010
SER 2810.0015
LYS 2820.0014
CYS 2830.0010
PHE 2840.0011
ASP 2880.0017
TYR 2890.0011
GLN 2900.0013
TYR 2910.0032
CYS 2970.0007
ASN 2980.0008
PRO 2990.0009
GLY 3000.0012
LYS 3010.0009
LYS 3020.0011
ASN 3030.0008
THR 3040.0010
ILE 3050.0009
SER 3060.0007
GLY 3070.0010
TYR 3080.0010
LYS 3090.0009
ARG 3100.0008
MET 3110.0009
MET 3120.0012
ALA 3130.0015
THR 3140.0017
LYS 3150.0016
ASP 3160.0022
SER 3170.0015
PHE 3180.0008
GLN 3190.0002
SER 3200.0011
PHE 3210.0018
ASN 3220.0017
LEU 3230.0018
THR 3240.0022
GLU 3250.0022
PRO 3260.0018
HIS 3270.0021
ILE 3280.0016
THR 3290.0014
THR 3300.0014
ASN 3310.0016
LYS 3320.0015
LEU 3330.0015
GLU 3340.0020
TRP 3350.0022
ILE 3360.0027
ASP 3370.0029
PRO 3380.0032
ASP 3390.0035
GLY 3400.0037
ASN 3410.0036
THR 3420.0041
ARG 3430.0032
GLY 3440.0043
GLY 3450.0042
GLY 3460.0051
GLY 10.0026
SER 20.0022
HIS 30.0017
SER 40.0013
MET 50.0008
ARG 60.0003
TYR 70.0005
PHE 80.0007
PHE 90.0010
THR 100.0013
SER 110.0011
VAL 120.0013
SER 130.0015
ARG 140.0025
PRO 150.0030
GLY 160.0066
ARG 170.0058
GLY 180.0047
GLU 190.0032
PRO 200.0019
ARG 210.0017
PHE 220.0014
ILE 230.0012
ALA 240.0010
VAL 250.0010
GLY 260.0008
TYR 270.0006
VAL 280.0007
ASP 290.0011
ASP 300.0007
THR 310.0003
GLN 320.0002
PHE 330.0003
VAL 340.0007
ARG 350.0010
PHE 360.0012
ASP 370.0014
SER 380.0018
ASP 390.0019
ALA 400.0017
ALA 410.0019
SER 420.0019
GLN 430.0020
ARG 440.0018
MET 450.0014
GLU 460.0014
PRO 470.0011
ARG 480.0008
ALA 490.0009
PRO 500.0015
TRP 510.0017
ILE 520.0013
GLU 530.0019
GLN 540.0022
GLU 550.0019
GLY 560.0022
PRO 570.0024
GLU 580.0023
TYR 590.0018
TRP 600.0019
ASP 610.0021
GLY 620.0019
GLU 630.0016
THR 640.0018
ARG 650.0020
LYS 660.0015
VAL 670.0013
LYS 680.0015
ALA 690.0016
HIS 700.0014
SER 710.0011
GLN 720.0016
THR 730.0014
HIS 740.0009
ARG 750.0015
VAL 760.0010
ASP 770.0009
LEU 780.0008
GLY 790.0010
THR 800.0012
LEU 810.0010
ARG 820.0011
GLY 830.0015
TYR 840.0016
TYR 850.0016
ASN 860.0029
GLN 870.0023
SER 880.0024
GLU 890.0023
ALA 900.0019
GLY 910.0007
SER 920.0008
HIS 930.0007
THR 940.0009
VAL 950.0010
GLN 960.0011
ARG 970.0008
MET 980.0006
TYR 990.0004
GLY 1000.0004
CYS 1010.0012
ASP 1020.0015
VAL 1030.0018
GLY 1040.0023
SER 1050.0025
ASP 1060.0026
TRP 1070.0021
ARG 1080.0021
PHE 1090.0020
LEU 1100.0023
ARG 1110.0014
GLY 1120.0011
TYR 1130.0008
HIS 1140.0007
GLN 1150.0007
TYR 1160.0008
ALA 1170.0009
TYR 1180.0009
ASP 1190.0010
GLY 1200.0012
LYS 1210.0011
ASP 1220.0010
TYR 1230.0008
ILE 1240.0006
ALA 1250.0006
LEU 1260.0003
LYS 1270.0007
GLU 1280.0012
ASP 1290.0015
LEU 1300.0012
ARG 1310.0014
SER 1320.0008
TRP 1330.0002
THR 1340.0006
ALA 1350.0010
ALA 1360.0014
ASP 1370.0014
MET 1380.0016
ALA 1390.0013
ALA 1400.0012
GLN 1410.0013
THR 1420.0014
THR 1430.0009
LYS 1440.0006
HIS 1450.0010
LYS 1460.0013
TRP 1470.0010
GLU 1480.0008
ALA 1490.0013
ALA 1500.0017
HIS 1510.0018
VAL 1520.0016
ALA 1530.0014
GLU 1540.0019
GLN 1550.0020
LEU 1560.0014
ARG 1570.0017
ALA 1580.0018
TYR 1590.0014
LEU 1600.0013
GLU 1610.0017
GLY 1620.0014
THR 1630.0010
CYS 1640.0009
VAL 1650.0012
GLU 1660.0010
TRP 1670.0006
LEU 1680.0009
ARG 1690.0013
ARG 1700.0011
TYR 1710.0011
LEU 1720.0016
GLU 1730.0018
ASN 1740.0017
GLY 1750.0018
LYS 1760.0023
GLU 1770.0025
THR 1780.0017
LEU 1790.0015
GLN 1800.0024
ARG 1810.0027
THR 1820.0030
ASP 1830.0024
ALA 1840.0031
PRO 1850.0024
LYS 1860.0020
THR 1870.0017
HIS 1880.0014
MET 1890.0010
THR 1900.0012
HIS 1910.0017
HIS 1920.0024
ALA 1930.0027
VAL 1940.0031
SER 1950.0034
ASP 1960.0032
HIS 1970.0027
GLU 1980.0024
ALA 1990.0020
THR 2000.0018
LEU 2010.0010
ARG 2020.0011
CYS 2030.0011
TRP 2040.0010
ALA 2050.0013
LEU 2060.0008
SER 2070.0005
PHE 2080.0013
TYR 2090.0017
PRO 2100.0024
ALA 2110.0029
GLU 2120.0038
ILE 2130.0034
THR 2140.0037
LEU 2150.0029
THR 2160.0025
TRP 2170.0021
GLN 2180.0022
ARG 2190.0019
ASP 2200.0020
GLY 2210.0017
GLU 2220.0018
ASP 2230.0017
GLN 2240.0016
THR 2250.0017
GLN 2260.0012
ASP 2270.0013
THR 2280.0015
GLU 2290.0017
LEU 2300.0020
VAL 2310.0019
GLU 2320.0020
THR 2330.0020
ARG 2340.0020
PRO 2350.0020
ALA 2360.0017
GLY 2370.0020
ASP 2380.0015
GLY 2390.0017
THR 2400.0014
PHE 2410.0016
GLN 2420.0015
LYS 2430.0017
TRP 2440.0016
ALA 2450.0019
ALA 2460.0017
VAL 2470.0018
VAL 2480.0019
VAL 2490.0017
PRO 2500.0019
SER 2510.0023
GLY 2520.0019
GLN 2530.0014
GLU 2540.0012
GLN 2550.0013
ARG 2560.0014
TYR 2570.0016
THR 2580.0021
CYS 2590.0024
HIS 2600.0032
VAL 2610.0036
GLN 2620.0048
HIS 2630.0045
GLU 2640.0053
GLY 2650.0047
LEU 2660.0072
PRO 2670.0107
LYS 2680.0104
PRO 2690.0079
LEU 2700.0055
THR 2710.0040
LEU 2720.0032
ARG 2730.0028
TRP 2740.0020
GLU 2750.0027
PRO 2760.0042
GLN 2780.0013
ARG 2790.0014
THR 2800.0014
PRO 2810.0016
LYS 2820.0017
ILE 2830.0021
GLN 2840.0021
VAL 2850.0022
TYR 2860.0022
SER 2870.0023
ARG 2880.0024
HIS 2890.0027
PRO 2900.0029
ALA 2910.0028
GLU 2920.0031
ASN 2930.0032
GLY 2940.0036
LYS 2950.0038
SER 2960.0037
ASN 2970.0033
PHE 2980.0027
LEU 2990.0025
ASN 3000.0025
CYS 3010.0024
TYR 3020.0023
VAL 3030.0018
SER 3040.0018
GLY 3050.0017
PHE 3060.0015
HIS 3070.0014
PRO 3080.0016
SER 3090.0017
ASP 3100.0018
ILE 3110.0016
GLU 3120.0017
VAL 3130.0026
ASP 3140.0028
LEU 3150.0029
LEU 3160.0029
LYS 3170.0031
ASN 3180.0032
GLY 3190.0033
GLU 3200.0037
ARG 3210.0038
ILE 3220.0039
GLU 3230.0037
LYS 3240.0038
VAL 3250.0031
GLU 3260.0032
HIS 3270.0027
SER 3280.0018
ASP 3290.0016
LEU 3300.0015
SER 3310.0016
PHE 3320.0016
SER 3330.0010
LYS 3340.0009
ASP 3350.0010
TRP 3360.0012
SER 3370.0012
PHE 3380.0017
TYR 3390.0018
LEU 3400.0020
LEU 3410.0021
TYR 3420.0022
TYR 3430.0027
THR 3440.0030
GLU 3450.0034
PHE 3460.0032
THR 3470.0033
PRO 3480.0032
THR 3490.0031
GLU 3500.0030
LYS 3510.0030
ASP 3520.0031
GLU 3530.0027
TYR 3540.0028
ALA 3550.0026
CYS 3560.0026
ARG 3570.0025
VAL 3580.0021
ASN 3590.0021
HIS 3600.0021
VAL 3610.0021
THR 3620.0019
LEU 3630.0023
SER 3640.0022
GLN 3650.0023
PRO 3660.0024
LYS 3670.0024
ILE 3680.0026
VAL 3690.0024
LYS 3700.0024
TRP 3710.0024
ASP 3720.0024
ARG 3730.0024
ASP 3740.0023
MET 3750.0023
SER 10.0005
GLN 20.0005
PHE 30.0005
ARG 40.0006
VAL 50.0007
SER 60.0012
PRO 70.0012
LEU 80.0012
ASP 90.0012
ARG 100.0012
THR 110.0014
TRP 120.0015
ASN 130.0015
LEU 140.0018
GLY 150.0017
GLU 160.0012
THR 170.0012
VAL 180.0012
GLU 190.0012
LEU 200.0012
LYS 210.0006
CYS 220.0005
GLN 230.0005
VAL 240.0004
LEU 250.0005
LEU 260.0006
SER 270.0008
ASN 280.0010
PRO 290.0009
THR 300.0011
SER 310.0008
GLY 320.0006
CYS 330.0006
SER 340.0007
TRP 350.0009
LEU 360.0011
PHE 370.0011
GLN 380.0011
PRO 390.0011
ARG 400.0011
GLY 410.0006
ALA 420.0005
ALA 430.0005
ALA 440.0007
SER 450.0008
PRO 460.0009
THR 470.0009
PHE 480.0009
LEU 490.0010
LEU 500.0010
TYR 510.0010
LEU 520.0010
SER 530.0010
GLN 540.0009
ASN 550.0008
LYS 560.0007
PRO 570.0007
LYS 580.0008
ALA 590.0009
ALA 600.0011
GLU 610.0010
GLY 620.0010
LEU 630.0011
ASP 640.0012
THR 650.0013
GLN 660.0013
ARG 670.0012
PHE 680.0012
SER 690.0013
GLY 700.0013
LYS 710.0009
ARG 720.0009
LEU 730.0009
GLY 740.0009
ASP 750.0008
THR 760.0010
PHE 770.0010
VAL 780.0010
LEU 790.0010
THR 800.0010
LEU 810.0013
SER 820.0012
ASP 830.0013
PHE 840.0014
ARG 850.0016
ARG 860.0015
GLU 870.0016
ASN 880.0015
GLU 890.0014
GLY 900.0014
TYR 910.0011
TYR 920.0011
PHE 930.0010
CYS 940.0009
SER 950.0009
ALA 960.0003
LEU 970.0005
SER 980.0007
ASN 990.0009
SER 1000.0007
ILE 1010.0005
MET 1020.0004
TYR 1030.0005
PHE 1040.0007
SER 1050.0008
HIS 1060.0013
PHE 1070.0012
VAL 1080.0012
PRO 1090.0011
VAL 1100.0011
PHE 1110.0015
LEU 1120.0014
PRO 1130.0013
ALA 1140.0013
SER 10.0007
GLN 20.0007
PHE 30.0007
ARG 40.0006
VAL 50.0005
SER 60.0004
PRO 70.0002
LEU 80.0003
ASP 90.0005
ARG 100.0006
THR 110.0009
TRP 120.0009
ASN 130.0012
LEU 140.0015
GLY 150.0013
GLU 160.0008
THR 170.0006
VAL 180.0005
GLU 190.0004
LEU 200.0005
LYS 210.0006
CYS 220.0007
GLN 230.0007
VAL 240.0007
LEU 250.0007
LEU 260.0006
SER 270.0006
ASN 280.0005
PRO 290.0006
THR 300.0006
SER 310.0006
GLY 320.0006
CYS 330.0006
SER 340.0006
TRP 350.0007
LEU 360.0008
PHE 370.0008
GLN 380.0008
PRO 390.0008
ARG 400.0007
GLY 410.0009
ALA 420.0010
ALA 430.0012
ALA 440.0011
SER 450.0011
PRO 460.0008
THR 470.0008
PHE 480.0007
LEU 490.0007
LEU 500.0006
TYR 510.0008
LEU 520.0008
SER 530.0008
GLN 540.0008
ASN 550.0007
LYS 560.0005
PRO 570.0005
LYS 580.0005
ALA 590.0006
ALA 600.0006
GLU 610.0005
GLY 620.0009
LEU 630.0009
ASP 640.0013
THR 650.0014
GLN 660.0015
ARG 670.0012
PHE 680.0012
SER 690.0012
GLY 700.0012
LYS 710.0010
ARG 720.0009
LEU 730.0010
GLY 740.0009
ASP 750.0008
THR 760.0008
PHE 770.0008
VAL 780.0008
LEU 790.0008
THR 800.0008
LEU 810.0009
SER 820.0008
ASP 830.0010
PHE 840.0011
ARG 850.0015
ARG 860.0018
GLU 870.0019
ASN 880.0013
GLU 890.0010
GLY 900.0007
TYR 910.0005
TYR 920.0006
PHE 930.0006
CYS 940.0007
SER 950.0008
ALA 960.0006
LEU 970.0005
SER 980.0005
ASN 990.0005
SER 1000.0005
ILE 1010.0008
MET 1020.0008
TYR 1030.0007
PHE 1040.0007
SER 1050.0007
HIS 1060.0006
PHE 1070.0005
VAL 1080.0003
PRO 1090.0003
VAL 1100.0005
PHE 1110.0008
LEU 1120.0014
PRO 1130.0017
ALA 1140.0020

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.