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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0742
MET 10.0086
SER 20.0061
THR 30.0015
ILE 40.0040
THR 50.0056
LYS 60.0051
ASP 70.0021
GLN 80.0028
ILE 90.0026
LEU 100.0011
GLU 110.0053
GLY 120.0057
VAL 130.0035
ALA 140.0070
ALA 150.0094
LEU 160.0041
SER 170.0020
VAL 180.0043
MET 190.0042
GLU 200.0022
ILE 210.0013
VAL 220.0031
GLU 230.0032
LEU 240.0014
ILE 250.0013
SER 260.0004
ALA 270.0016
MET 280.0014
GLU 290.0006
GLU 300.0017
LYS 310.0025
PHE 320.0008
GLY 330.0020
VAL 340.0027
SER 350.0042
ALA 360.0065
ALA 370.0055
ALA 380.0026
VAL 390.0038
ALA 400.0031
ALA 410.0055
GLY 420.0083
PRO 430.0082
ALA 440.0103
ALA 450.0077
ALA 460.0064
VAL 470.0085
GLU 480.0059
ALA 490.0056
ALA 500.0073
GLU 510.0037
GLU 520.0035
GLN 530.0019
THR 540.0041
GLU 550.0050
PHE 560.0053
ASP 570.0049
VAL 580.0044
VAL 590.0041
LEU 600.0037
ALA 610.0045
SER 620.0037
PHE 630.0026
GLY 640.0024
GLU 650.0029
ASN 660.0028
LYS 670.0036
VAL 680.0049
ALA 690.0041
VAL 700.0022
ILE 710.0031
LYS 720.0047
ALA 730.0042
VAL 740.0024
ARG 750.0034
GLY 760.0046
ALA 770.0039
THR 780.0024
GLY 790.0030
LEU 800.0028
GLY 810.0048
LEU 820.0058
LYS 830.0066
GLU 840.0049
ALA 850.0029
LYS 860.0035
ASP 870.0043
LEU 880.0034
VAL 890.0028
GLU 900.0041
SER 910.0034
ALA 920.0030
PRO 930.0032
ALA 940.0034
VAL 950.0041
LEU 960.0036
LYS 970.0041
GLU 980.0047
GLY 990.0053
VAL 1000.0051
ASN 1010.0051
LYS 1020.0058
ASP 1030.0055
GLU 1040.0046
ALA 1050.0051
GLU 1060.0065
THR 1070.0056
LEU 1080.0042
LYS 1090.0051
LYS 1100.0057
SER 1110.0049
LEU 1120.0033
GLU 1130.0046
GLU 1140.0049
ALA 1150.0030
GLY 1160.0025
ALA 1170.0025
SER 1180.0043
VAL 1190.0048
GLU 1200.0064
ILE 1210.0053
LYS 1220.0047
GLU 1230.0038
ALA 1240.0037
ALA 1250.0037
ALA 1260.0047
LYS 1270.0035
ALA 1280.0040
TYR 1290.0028
LYS 1300.0030
ILE 1310.0022
ILE 1320.0021
SER 1330.0035
LEU 1340.0051
LYS 1350.0065
TYR 1360.0052
THR 1370.0037
ARG 1380.0061
LYS 1390.0062
VAL 1400.0081
CYS 1410.0117
ILE 1420.0125
GLY 1430.0151
PRO 1440.0138
GLY 1450.0171
PRO 1460.0142
GLY 1470.0190
LYS 1480.0142
ALA 1490.0113
TYR 1500.0060
LYS 1510.0030
ILE 1520.0031
ILE 1530.0047
SER 1540.0049
LEU 1550.0068
LYS 1560.0080
TYR 1570.0066
THR 1580.0074
ARG 1590.0065
LYS 1600.0073
VAL 1610.0082
CYS 1620.0128
GLY 1630.0207
PRO 1640.0207
GLY 1650.0166
PRO 1660.0130
GLY 1670.0213
GLY 1680.0347
LYS 1690.0287
ALA 1700.0211
TYR 1710.0102
LYS 1720.0065
ILE 1730.0055
ILE 1740.0039
SER 1750.0100
LEU 1760.0081
LYS 1770.0075
TYR 1780.0064
THR 1790.0057
ARG 1800.0047
LYS 1810.0033
VAL 1820.0044
GLY 1830.0056
PRO 1840.0077
GLY 1850.0082
PRO 1860.0097
GLY 1870.0061
ILE 1880.0063
ILE 1890.0052
SER 1900.0046
LEU 1910.0062
LYS 1920.0061
TYR 1930.0062
THR 1940.0064
ARG 1950.0068
LYS 1960.0054
VAL 1970.0042
CYS 1980.0023
ILE 1990.0022
GLN 2000.0022
LEU 2010.0048
GLY 2020.0048
GLY 2030.0046
PRO 2040.0043
GLY 2050.0043
PRO 2060.0051
GLY 2070.0053
ASN 2080.0054
ILE 2090.0051
LYS 2100.0048
THR 2110.0048
ALA 2120.0050
PHE 2130.0046
HIS 2140.0047
CYS 2150.0053
TYR 2160.0067
ALA 2170.0058
ALA 2180.0056
TYR 2190.0072
MET 2200.0077
THR 2210.0080
SER 2220.0080
ILE 2230.0087
LYS 2240.0088
ALA 2250.0097
CYS 2260.0504
ASP 2270.0546
LEU 2280.0242
LYS 2290.0232
LYS 2300.0501
PRO 2310.0264
LEU 2320.0227
MET 2330.0091
GLU 2340.0182
SER 2350.0214
GLY 2360.0128
TRP 2370.0134
SER 2380.0131
ASP 2390.0194
THR 2400.0218
ALA 2410.0332
HIS 2420.0274
GLY 2430.0208
LYS 2440.0188
LYS 2450.0181
SER 2460.0124
LEU 2470.0085
PRO 2480.0130
SER 2490.0229
SER 2500.0157
SER 2510.0100
SER 2520.0089
TYR 2530.0093
SER 2540.0134
TYR 2550.0107
ARG 2560.0024
ARG 2570.0025
LYS 2580.0023
LEU 2590.0020
THR 2600.0022
ASN 2610.0215
PRO 2620.0415
ALA 2630.0290
ASN 2640.0245
LYS 2650.0152
GLU 2660.0174
GLU 2670.0204
SER 2680.0174
ILE 2690.0152
LYS 2700.0169
LYS 2710.0119
GLN 2720.0169
LYS 2730.0192
TYR 2740.0180
SER 2750.0287
TYR 2760.0119
PRO 2770.0141
TRP 2780.0126
GLN 2790.0096
THR 2800.0120
SER 2810.0170
LYS 2820.0172
CYS 2830.0110
PHE 2840.0139
ASP 2880.0043
TYR 2890.0033
GLN 2900.0045
TYR 2910.0103
CYS 2970.0129
ASN 2980.0071
PRO 2990.0146
GLY 3000.0120
LYS 3010.0063
LYS 3020.0130
ASN 3030.0067
THR 3040.0057
ILE 3050.0067
SER 3060.0069
GLY 3070.0107
TYR 3080.0086
LYS 3090.0083
ARG 3100.0086
MET 3110.0058
MET 3120.0046
ALA 3130.0089
THR 3140.0116
LYS 3150.0103
ASP 3160.0163
SER 3170.0132
PHE 3180.0117
GLN 3190.0106
SER 3200.0111
PHE 3210.0104
ASN 3220.0104
LEU 3230.0073
THR 3240.0079
GLU 3250.0069
PRO 3260.0036
HIS 3270.0103
ILE 3280.0150
THR 3290.0220
THR 3300.0289
ASN 3310.0268
LYS 3320.0148
LEU 3330.0099
GLU 3340.0045
TRP 3350.0043
ILE 3360.0108
ASP 3370.0138
PRO 3380.0145
ASP 3390.0150
GLY 3400.0146
ASN 3410.0147
THR 3420.0143
ARG 3430.0032
GLY 3440.0073
GLY 3450.0093
GLY 3460.0046
GLY 10.0060
SER 20.0061
HIS 30.0048
SER 40.0045
MET 50.0038
ARG 60.0026
TYR 70.0021
PHE 80.0025
PHE 90.0022
THR 100.0027
SER 110.0026
VAL 120.0035
SER 130.0036
ARG 140.0030
PRO 150.0041
GLY 160.0037
ARG 170.0022
GLY 180.0033
GLU 190.0036
PRO 200.0023
ARG 210.0030
PHE 220.0024
ILE 230.0026
ALA 240.0019
VAL 250.0024
GLY 260.0037
TYR 270.0027
VAL 280.0016
ASP 290.0018
ASP 300.0019
THR 310.0035
GLN 320.0033
PHE 330.0028
VAL 340.0033
ARG 350.0043
PHE 360.0057
ASP 370.0064
SER 380.0071
ASP 390.0089
ALA 400.0109
ALA 410.0153
SER 420.0144
GLN 430.0124
ARG 440.0107
MET 450.0075
GLU 460.0065
PRO 470.0051
ARG 480.0055
ALA 490.0048
PRO 500.0048
TRP 510.0040
ILE 520.0032
GLU 530.0044
GLN 540.0039
GLU 550.0031
GLY 560.0072
PRO 570.0101
GLU 580.0101
TYR 590.0069
TRP 600.0082
ASP 610.0121
GLY 620.0105
GLU 630.0075
THR 640.0096
ARG 650.0113
LYS 660.0079
VAL 670.0058
LYS 680.0078
ALA 690.0080
HIS 700.0050
SER 710.0039
GLN 720.0052
THR 730.0054
HIS 740.0037
ARG 750.0035
VAL 760.0046
ASP 770.0048
LEU 780.0046
GLY 790.0053
THR 800.0061
LEU 810.0062
ARG 820.0063
GLY 830.0066
TYR 840.0067
TYR 850.0069
ASN 860.0056
GLN 870.0055
SER 880.0052
GLU 890.0057
ALA 900.0052
GLY 910.0058
SER 920.0050
HIS 930.0050
THR 940.0046
VAL 950.0043
GLN 960.0041
ARG 970.0034
MET 980.0034
TYR 990.0029
GLY 1000.0031
CYS 1010.0051
ASP 1020.0059
VAL 1030.0068
GLY 1040.0079
SER 1050.0081
ASP 1060.0087
TRP 1070.0070
ARG 1080.0082
PHE 1090.0078
LEU 1100.0082
ARG 1110.0061
GLY 1120.0045
TYR 1130.0039
HIS 1140.0033
GLN 1150.0046
TYR 1160.0048
ALA 1170.0052
TYR 1180.0054
ASP 1190.0056
GLY 1200.0056
LYS 1210.0058
ASP 1220.0057
TYR 1230.0055
ILE 1240.0052
ALA 1250.0050
LEU 1260.0041
LYS 1270.0053
GLU 1280.0065
ASP 1290.0066
LEU 1300.0051
ARG 1310.0052
SER 1320.0044
TRP 1330.0044
THR 1340.0059
ALA 1350.0067
ALA 1360.0068
ASP 1370.0069
MET 1380.0071
ALA 1390.0067
ALA 1400.0063
GLN 1410.0068
THR 1420.0065
THR 1430.0053
LYS 1440.0048
HIS 1450.0047
LYS 1460.0049
TRP 1470.0041
GLU 1480.0039
ALA 1490.0047
ALA 1500.0057
HIS 1510.0066
VAL 1520.0055
ALA 1530.0048
GLU 1540.0069
GLN 1550.0072
LEU 1560.0050
ARG 1570.0057
ALA 1580.0065
TYR 1590.0054
LEU 1600.0052
GLU 1610.0067
GLY 1620.0067
THR 1630.0061
CYS 1640.0055
VAL 1650.0059
GLU 1660.0058
TRP 1670.0053
LEU 1680.0048
ARG 1690.0047
ARG 1700.0047
TYR 1710.0030
LEU 1720.0027
GLU 1730.0040
ASN 1740.0038
GLY 1750.0023
LYS 1760.0032
GLU 1770.0056
THR 1780.0047
LEU 1790.0027
GLN 1800.0031
ARG 1810.0174
THR 1820.0196
ASP 1830.0192
ALA 1840.0240
PRO 1850.0203
LYS 1860.0217
THR 1870.0176
HIS 1880.0162
MET 1890.0106
THR 1900.0118
HIS 1910.0134
HIS 1920.0192
ALA 1930.0208
VAL 1940.0259
SER 1950.0293
ASP 1960.0283
HIS 1970.0249
GLU 1980.0211
ALA 1990.0149
THR 2000.0116
LEU 2010.0038
ARG 2020.0033
CYS 2030.0032
TRP 2040.0051
ALA 2050.0076
LEU 2060.0072
SER 2070.0098
PHE 2080.0082
TYR 2090.0081
PRO 2100.0099
ALA 2110.0095
GLU 2120.0162
ILE 2130.0151
THR 2140.0179
LEU 2150.0131
THR 2160.0141
TRP 2170.0136
GLN 2180.0185
ARG 2190.0197
ASP 2200.0240
GLY 2210.0208
GLU 2220.0191
ASP 2230.0144
GLN 2240.0123
THR 2250.0107
GLN 2260.0087
ASP 2270.0092
THR 2280.0091
GLU 2290.0087
LEU 2300.0085
VAL 2310.0067
GLU 2320.0066
THR 2330.0054
ARG 2340.0053
PRO 2350.0046
ALA 2360.0049
GLY 2370.0059
ASP 2380.0059
GLY 2390.0048
THR 2400.0043
PHE 2410.0028
GLN 2420.0032
LYS 2430.0041
TRP 2440.0043
ALA 2450.0060
ALA 2460.0071
VAL 2470.0120
VAL 2480.0154
VAL 2490.0153
PRO 2500.0185
SER 2510.0143
GLY 2520.0097
GLN 2530.0139
GLU 2540.0074
GLN 2550.0139
ARG 2560.0174
TYR 2570.0147
THR 2580.0173
CYS 2590.0156
HIS 2600.0210
VAL 2610.0203
GLN 2620.0275
HIS 2630.0246
GLU 2640.0304
GLY 2650.0296
LEU 2660.0496
PRO 2670.0742
LYS 2680.0720
PRO 2690.0536
LEU 2700.0398
THR 2710.0310
LEU 2720.0246
ARG 2730.0241
TRP 2740.0161
GLU 2750.0234
PRO 2760.0430
GLN 2780.0043
ARG 2790.0041
THR 2800.0035
PRO 2810.0036
LYS 2820.0043
ILE 2830.0046
GLN 2840.0049
VAL 2850.0046
TYR 2860.0053
SER 2870.0056
ARG 2880.0054
HIS 2890.0083
PRO 2900.0111
ALA 2910.0107
GLU 2920.0135
ASN 2930.0144
GLY 2940.0163
LYS 2950.0159
SER 2960.0135
ASN 2970.0101
PHE 2980.0065
LEU 2990.0056
ASN 3000.0050
CYS 3010.0042
TYR 3020.0042
VAL 3030.0038
SER 3040.0042
GLY 3050.0044
PHE 3060.0037
HIS 3070.0036
PRO 3080.0033
SER 3090.0033
ASP 3100.0027
ILE 3110.0028
GLU 3120.0034
VAL 3130.0049
ASP 3140.0063
LEU 3150.0065
LEU 3160.0076
LYS 3170.0092
ASN 3180.0095
GLY 3190.0098
GLU 3200.0121
ARG 3210.0116
ILE 3220.0118
GLU 3230.0137
LYS 3240.0128
VAL 3250.0089
GLU 3260.0075
HIS 3270.0044
SER 3280.0041
ASP 3290.0028
LEU 3300.0022
SER 3310.0033
PHE 3320.0043
SER 3330.0047
LYS 3340.0048
ASP 3350.0047
TRP 3360.0046
SER 3370.0045
PHE 3380.0035
TYR 3390.0036
LEU 3400.0034
LEU 3410.0040
TYR 3420.0040
TYR 3430.0048
THR 3440.0073
GLU 3450.0098
PHE 3460.0104
THR 3470.0121
PRO 3480.0113
THR 3490.0129
GLU 3500.0129
LYS 3510.0109
ASP 3520.0094
GLU 3530.0062
TYR 3540.0059
ALA 3550.0048
CYS 3560.0046
ARG 3570.0059
VAL 3580.0040
ASN 3590.0029
HIS 3600.0023
VAL 3610.0018
THR 3620.0017
LEU 3630.0013
SER 3640.0016
GLN 3650.0018
PRO 3660.0028
LYS 3670.0038
ILE 3680.0068
VAL 3690.0051
LYS 3700.0045
TRP 3710.0048
ASP 3720.0059
ARG 3730.0087
ASP 3740.0124
MET 3750.0131
SER 10.0035
GLN 20.0033
PHE 30.0028
ARG 40.0027
VAL 50.0024
SER 60.0019
PRO 70.0036
LEU 80.0047
ASP 90.0069
ARG 100.0071
THR 110.0062
TRP 120.0062
ASN 130.0070
LEU 140.0064
GLY 150.0068
GLU 160.0077
THR 170.0071
VAL 180.0052
GLU 190.0052
LEU 200.0033
LYS 210.0027
CYS 220.0018
GLN 230.0017
VAL 240.0019
LEU 250.0030
LEU 260.0033
SER 270.0042
ASN 280.0049
PRO 290.0051
THR 300.0064
SER 310.0016
GLY 320.0019
CYS 330.0012
SER 340.0019
TRP 350.0027
LEU 360.0040
PHE 370.0037
GLN 380.0043
PRO 390.0041
ARG 400.0046
GLY 410.0079
ALA 420.0077
ALA 430.0076
ALA 440.0075
SER 450.0074
PRO 460.0055
THR 470.0053
PHE 480.0055
LEU 490.0048
LEU 500.0051
TYR 510.0028
LEU 520.0029
SER 530.0043
GLN 540.0062
ASN 550.0063
LYS 560.0077
PRO 570.0063
LYS 580.0065
ALA 590.0068
ALA 600.0074
GLU 610.0103
GLY 620.0100
LEU 630.0083
ASP 640.0085
THR 650.0093
GLN 660.0108
ARG 670.0082
PHE 680.0065
SER 690.0070
GLY 700.0056
LYS 710.0055
ARG 720.0045
LEU 730.0044
GLY 740.0034
ASP 750.0027
THR 760.0025
PHE 770.0029
VAL 780.0040
LEU 790.0042
THR 800.0055
LEU 810.0059
SER 820.0074
ASP 830.0067
PHE 840.0046
ARG 850.0029
ARG 860.0031
GLU 870.0005
ASN 880.0018
GLU 890.0012
GLY 900.0022
TYR 910.0025
TYR 920.0020
PHE 930.0021
CYS 940.0021
SER 950.0030
ALA 960.0039
LEU 970.0042
SER 980.0044
ASN 990.0048
SER 1000.0044
ILE 1010.0031
MET 1020.0035
TYR 1030.0033
PHE 1040.0039
SER 1050.0039
HIS 1060.0037
PHE 1070.0030
VAL 1080.0012
PRO 1090.0024
VAL 1100.0018
PHE 1110.0035
LEU 1120.0049
PRO 1130.0062
ALA 1140.0067
SER 10.0090
GLN 20.0080
PHE 30.0070
ARG 40.0066
VAL 50.0064
SER 60.0045
PRO 70.0069
LEU 80.0089
ASP 90.0120
ARG 100.0131
THR 110.0142
TRP 120.0135
ASN 130.0163
LEU 140.0163
GLY 150.0130
GLU 160.0108
THR 170.0072
VAL 180.0066
GLU 190.0043
LEU 200.0040
LYS 210.0048
CYS 220.0052
GLN 230.0051
VAL 240.0059
LEU 250.0069
LEU 260.0080
SER 270.0093
ASN 280.0083
PRO 290.0060
THR 300.0060
SER 310.0073
GLY 320.0064
CYS 330.0060
SER 340.0060
TRP 350.0055
LEU 360.0076
PHE 370.0080
GLN 380.0092
PRO 390.0098
ARG 400.0103
GLY 410.0070
ALA 420.0066
ALA 430.0059
ALA 440.0061
SER 450.0060
PRO 460.0071
THR 470.0064
PHE 480.0060
LEU 490.0050
LEU 500.0050
TYR 510.0066
LEU 520.0070
SER 530.0093
GLN 540.0109
ASN 550.0102
LYS 560.0080
PRO 570.0065
LYS 580.0066
ALA 590.0049
ALA 600.0053
GLU 610.0079
GLY 620.0094
LEU 630.0081
ASP 640.0092
THR 650.0090
GLN 660.0080
ARG 670.0059
PHE 680.0069
SER 690.0072
GLY 700.0073
LYS 710.0064
ARG 720.0057
LEU 730.0055
GLY 740.0049
ASP 750.0051
THR 760.0043
PHE 770.0045
VAL 780.0042
LEU 790.0043
THR 800.0042
LEU 810.0049
SER 820.0045
ASP 830.0084
PHE 840.0109
ARG 850.0151
ARG 860.0196
GLU 870.0196
ASN 880.0136
GLU 890.0137
GLY 900.0118
TYR 910.0086
TYR 920.0076
PHE 930.0074
CYS 940.0072
SER 950.0081
ALA 960.0062
LEU 970.0051
SER 980.0047
ASN 990.0045
SER 1000.0030
ILE 1010.0062
MET 1020.0062
TYR 1030.0065
PHE 1040.0066
SER 1050.0072
HIS 1060.0074
PHE 1070.0081
VAL 1080.0070
PRO 1090.0088
VAL 1100.0091
PHE 1110.0132
LEU 1120.0172
PRO 1130.0202
ALA 1140.0240

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.