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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0475
MET 10.0026
SER 20.0018
THR 30.0006
ILE 40.0011
THR 50.0020
LYS 60.0017
ASP 70.0009
GLN 80.0008
ILE 90.0003
LEU 100.0008
GLU 110.0019
GLY 120.0018
VAL 130.0014
ALA 140.0025
ALA 150.0030
LEU 160.0011
SER 170.0007
VAL 180.0021
MET 190.0023
GLU 200.0012
ILE 210.0009
VAL 220.0016
GLU 230.0014
LEU 240.0004
ILE 250.0009
SER 260.0005
ALA 270.0011
MET 280.0012
GLU 290.0007
GLU 300.0009
LYS 310.0016
PHE 320.0017
GLY 330.0011
VAL 340.0015
SER 350.0014
ALA 360.0030
ALA 370.0011
ALA 380.0027
VAL 390.0046
ALA 400.0045
ALA 410.0057
GLY 420.0082
PRO 430.0084
ALA 440.0092
ALA 450.0065
ALA 460.0042
VAL 470.0081
GLU 480.0033
ALA 490.0085
ALA 500.0128
GLU 510.0038
GLU 520.0046
GLN 530.0030
THR 540.0028
GLU 550.0012
PHE 560.0007
ASP 570.0008
VAL 580.0010
VAL 590.0011
LEU 600.0014
ALA 610.0018
SER 620.0025
PHE 630.0024
GLY 640.0035
GLU 650.0041
ASN 660.0035
LYS 670.0028
VAL 680.0024
ALA 690.0026
VAL 700.0021
ILE 710.0015
LYS 720.0015
ALA 730.0018
VAL 740.0012
ARG 750.0013
GLY 760.0018
ALA 770.0017
THR 780.0015
GLY 790.0022
LEU 800.0020
GLY 810.0020
LEU 820.0015
LYS 830.0024
GLU 840.0023
ALA 850.0015
LYS 860.0022
ASP 870.0022
LEU 880.0018
VAL 890.0020
GLU 900.0023
SER 910.0013
ALA 920.0015
PRO 930.0013
ALA 940.0012
VAL 950.0013
LEU 960.0010
LYS 970.0008
GLU 980.0009
GLY 990.0009
VAL 1000.0008
ASN 1010.0014
LYS 1020.0011
ASP 1030.0017
GLU 1040.0016
ALA 1050.0011
GLU 1060.0020
THR 1070.0023
LEU 1080.0017
LYS 1090.0020
LYS 1100.0027
SER 1110.0027
LEU 1120.0023
GLU 1130.0032
GLU 1140.0037
ALA 1150.0032
GLY 1160.0035
ALA 1170.0028
SER 1180.0029
VAL 1190.0020
GLU 1200.0019
ILE 1210.0013
LYS 1220.0011
GLU 1230.0015
ALA 1240.0021
ALA 1250.0033
ALA 1260.0049
LYS 1270.0044
ALA 1280.0052
TYR 1290.0043
LYS 1300.0050
ILE 1310.0033
ILE 1320.0040
SER 1330.0029
LEU 1340.0023
LYS 1350.0021
TYR 1360.0020
THR 1370.0030
ARG 1380.0030
LYS 1390.0031
VAL 1400.0041
CYS 1410.0025
ILE 1420.0029
GLY 1430.0014
PRO 1440.0016
GLY 1450.0017
PRO 1460.0038
GLY 1470.0026
LYS 1480.0028
ALA 1490.0029
TYR 1500.0028
LYS 1510.0012
ILE 1520.0018
ILE 1530.0017
SER 1540.0031
LEU 1550.0036
LYS 1560.0034
TYR 1570.0034
THR 1580.0034
ARG 1590.0035
LYS 1600.0033
VAL 1610.0044
CYS 1620.0081
GLY 1630.0142
PRO 1640.0150
GLY 1650.0130
PRO 1660.0122
GLY 1670.0153
GLY 1680.0258
LYS 1690.0214
ALA 1700.0161
TYR 1710.0095
LYS 1720.0072
ILE 1730.0044
ILE 1740.0026
SER 1750.0025
LEU 1760.0023
LYS 1770.0020
TYR 1780.0012
THR 1790.0020
ARG 1800.0019
LYS 1810.0043
VAL 1820.0043
GLY 1830.0049
PRO 1840.0042
GLY 1850.0030
PRO 1860.0017
GLY 1870.0018
ILE 1880.0016
ILE 1890.0022
SER 1900.0025
LEU 1910.0034
LYS 1920.0029
TYR 1930.0025
THR 1940.0024
ARG 1950.0018
LYS 1960.0013
VAL 1970.0012
CYS 1980.0017
ILE 1990.0041
GLN 2000.0050
LEU 2010.0064
GLY 2020.0056
GLY 2030.0042
PRO 2040.0042
GLY 2050.0047
PRO 2060.0059
GLY 2070.0087
ASN 2080.0104
ILE 2090.0111
LYS 2100.0135
THR 2110.0172
ALA 2120.0163
PHE 2130.0172
HIS 2140.0195
CYS 2150.0196
TYR 2160.0229
ALA 2170.0227
ALA 2180.0226
TYR 2190.0230
MET 2200.0231
THR 2210.0212
SER 2220.0207
ILE 2230.0221
LYS 2240.0198
ALA 2250.0207
CYS 2260.0251
ASP 2270.0207
LEU 2280.0133
LYS 2290.0099
LYS 2300.0044
PRO 2310.0041
LEU 2320.0023
MET 2330.0019
GLU 2340.0022
SER 2350.0043
GLY 2360.0016
TRP 2370.0006
SER 2380.0012
ASP 2390.0011
THR 2400.0016
ALA 2410.0016
HIS 2420.0010
GLY 2430.0009
LYS 2440.0008
LYS 2450.0012
SER 2460.0009
LEU 2470.0017
PRO 2480.0025
SER 2490.0038
SER 2500.0006
SER 2510.0025
SER 2520.0019
TYR 2530.0019
SER 2540.0015
TYR 2550.0014
ARG 2560.0008
ARG 2570.0011
LYS 2580.0011
LEU 2590.0015
THR 2600.0018
ASN 2610.0026
PRO 2620.0046
ALA 2630.0028
ASN 2640.0037
LYS 2650.0028
GLU 2660.0018
GLU 2670.0014
SER 2680.0013
ILE 2690.0011
LYS 2700.0011
LYS 2710.0012
GLN 2720.0014
LYS 2730.0011
TYR 2740.0007
SER 2750.0009
TYR 2760.0005
PRO 2770.0007
TRP 2780.0005
GLN 2790.0007
THR 2800.0007
SER 2810.0006
LYS 2820.0007
CYS 2830.0006
PHE 2840.0007
ASP 2880.0033
TYR 2890.0022
GLN 2900.0024
TYR 2910.0060
CYS 2970.0212
ASN 2980.0120
PRO 2990.0211
GLY 3000.0160
LYS 3010.0106
LYS 3020.0204
ASN 3030.0105
THR 3040.0106
ILE 3050.0088
SER 3060.0112
GLY 3070.0203
TYR 3080.0135
LYS 3090.0107
ARG 3100.0161
MET 3110.0122
MET 3120.0067
ALA 3130.0183
THR 3140.0182
LYS 3150.0117
ASP 3160.0209
SER 3170.0125
PHE 3180.0076
GLN 3190.0093
SER 3200.0137
PHE 3210.0180
ASN 3220.0132
LEU 3230.0137
THR 3240.0173
GLU 3250.0176
PRO 3260.0139
HIS 3270.0223
ILE 3280.0179
THR 3290.0218
THR 3300.0206
ASN 3310.0244
LYS 3320.0241
LEU 3330.0187
GLU 3340.0226
TRP 3350.0210
ILE 3360.0243
ASP 3370.0257
PRO 3380.0269
ASP 3390.0307
GLY 3400.0331
ASN 3410.0342
THR 3420.0374
ARG 3430.0263
GLY 3440.0376
GLY 3450.0330
GLY 3460.0475
GLY 10.0152
SER 20.0146
HIS 30.0123
SER 40.0110
MET 50.0090
ARG 60.0067
TYR 70.0060
PHE 80.0062
PHE 90.0060
THR 100.0064
SER 110.0065
VAL 120.0067
SER 130.0065
ARG 140.0071
PRO 150.0070
GLY 160.0088
ARG 170.0088
GLY 180.0078
GLU 190.0068
PRO 200.0071
ARG 210.0072
PHE 220.0072
ILE 230.0068
ALA 240.0069
VAL 250.0066
GLY 260.0070
TYR 270.0079
VAL 280.0087
ASP 290.0098
ASP 300.0088
THR 310.0077
GLN 320.0073
PHE 330.0070
VAL 340.0068
ARG 350.0068
PHE 360.0081
ASP 370.0081
SER 380.0085
ASP 390.0087
ALA 400.0092
ALA 410.0100
SER 420.0097
GLN 430.0095
ARG 440.0088
MET 450.0080
GLU 460.0066
PRO 470.0062
ARG 480.0060
ALA 490.0062
PRO 500.0061
TRP 510.0079
ILE 520.0074
GLU 530.0060
GLN 540.0070
GLU 550.0072
GLY 560.0066
PRO 570.0068
GLU 580.0074
TYR 590.0073
TRP 600.0071
ASP 610.0092
GLY 620.0092
GLU 630.0082
THR 640.0088
ARG 650.0104
LYS 660.0084
VAL 670.0076
LYS 680.0085
ALA 690.0090
HIS 700.0080
SER 710.0077
GLN 720.0081
THR 730.0078
HIS 740.0067
ARG 750.0066
VAL 760.0062
ASP 770.0062
LEU 780.0058
GLY 790.0061
THR 800.0069
LEU 810.0069
ARG 820.0071
GLY 830.0078
TYR 840.0081
TYR 850.0084
ASN 860.0071
GLN 870.0072
SER 880.0072
GLU 890.0077
ALA 900.0076
GLY 910.0069
SER 920.0064
HIS 930.0057
THR 940.0055
VAL 950.0053
GLN 960.0056
ARG 970.0049
MET 980.0048
TYR 990.0048
GLY 1000.0051
CYS 1010.0094
ASP 1020.0119
VAL 1030.0139
GLY 1040.0167
SER 1050.0181
ASP 1060.0186
TRP 1070.0152
ARG 1080.0165
PHE 1090.0153
LEU 1100.0157
ARG 1110.0115
GLY 1120.0078
TYR 1130.0055
HIS 1140.0037
GLN 1150.0067
TYR 1160.0061
ALA 1170.0058
TYR 1180.0054
ASP 1190.0054
GLY 1200.0057
LYS 1210.0064
ASP 1220.0058
TYR 1230.0059
ILE 1240.0055
ALA 1250.0052
LEU 1260.0049
LYS 1270.0070
GLU 1280.0100
ASP 1290.0125
LEU 1300.0107
ARG 1310.0127
SER 1320.0085
TRP 1330.0046
THR 1340.0037
ALA 1350.0063
ALA 1360.0094
ASP 1370.0097
MET 1380.0101
ALA 1390.0099
ALA 1400.0094
GLN 1410.0081
THR 1420.0102
THR 1430.0090
LYS 1440.0059
HIS 1450.0076
LYS 1460.0119
TRP 1470.0110
GLU 1480.0104
ALA 1490.0144
ALA 1500.0173
HIS 1510.0200
VAL 1520.0166
ALA 1530.0134
GLU 1540.0195
GLN 1550.0206
LEU 1560.0124
ARG 1570.0133
ALA 1580.0155
TYR 1590.0118
LEU 1600.0095
GLU 1610.0131
GLY 1620.0134
THR 1630.0118
CYS 1640.0102
VAL 1650.0114
GLU 1660.0114
TRP 1670.0110
LEU 1680.0112
ARG 1690.0116
ARG 1700.0112
TYR 1710.0099
LEU 1720.0106
GLU 1730.0108
ASN 1740.0095
GLY 1750.0090
LYS 1760.0087
GLU 1770.0082
THR 1780.0079
LEU 1790.0086
GLN 1800.0092
ARG 1810.0099
THR 1820.0102
ASP 1830.0079
ALA 1840.0098
PRO 1850.0072
LYS 1860.0070
THR 1870.0054
HIS 1880.0060
MET 1890.0052
THR 1900.0080
HIS 1910.0120
HIS 1920.0158
ALA 1930.0184
VAL 1940.0200
SER 1950.0231
ASP 1960.0227
HIS 1970.0177
GLU 1980.0150
ALA 1990.0128
THR 2000.0110
LEU 2010.0061
ARG 2020.0052
CYS 2030.0025
TRP 2040.0021
ALA 2050.0016
LEU 2060.0020
SER 2070.0023
PHE 2080.0037
TYR 2090.0060
PRO 2100.0086
ALA 2110.0080
GLU 2120.0106
ILE 2130.0090
THR 2140.0096
LEU 2150.0068
THR 2160.0068
TRP 2170.0058
GLN 2180.0064
ARG 2190.0061
ASP 2200.0062
GLY 2210.0074
GLU 2220.0082
ASP 2230.0072
GLN 2240.0083
THR 2250.0082
GLN 2260.0089
ASP 2270.0088
THR 2280.0087
GLU 2290.0087
LEU 2300.0085
VAL 2310.0051
GLU 2320.0055
THR 2330.0050
ARG 2340.0052
PRO 2350.0054
ALA 2360.0064
GLY 2370.0092
ASP 2380.0079
GLY 2390.0055
THR 2400.0030
PHE 2410.0037
GLN 2420.0038
LYS 2430.0047
TRP 2440.0046
ALA 2450.0054
ALA 2460.0067
VAL 2470.0080
VAL 2480.0106
VAL 2490.0090
PRO 2500.0112
SER 2510.0137
GLY 2520.0109
GLN 2530.0071
GLU 2540.0067
GLN 2550.0054
ARG 2560.0025
TYR 2570.0028
THR 2580.0037
CYS 2590.0040
HIS 2600.0072
VAL 2610.0083
GLN 2620.0130
HIS 2630.0124
GLU 2640.0159
GLY 2650.0138
LEU 2660.0224
PRO 2670.0348
LYS 2680.0332
PRO 2690.0238
LEU 2700.0164
THR 2710.0116
LEU 2720.0090
ARG 2730.0085
TRP 2740.0078
GLU 2750.0111
PRO 2760.0170
GLN 2780.0050
ARG 2790.0041
THR 2800.0037
PRO 2810.0031
LYS 2820.0030
ILE 2830.0051
GLN 2840.0045
VAL 2850.0050
TYR 2860.0058
SER 2870.0075
ARG 2880.0097
HIS 2890.0112
PRO 2900.0115
ALA 2910.0106
GLU 2920.0122
ASN 2930.0111
GLY 2940.0116
LYS 2950.0133
SER 2960.0129
ASN 2970.0118
PHE 2980.0089
LEU 2990.0069
ASN 3000.0059
CYS 3010.0051
TYR 3020.0050
VAL 3030.0029
SER 3040.0030
GLY 3050.0031
PHE 3060.0032
HIS 3070.0036
PRO 3080.0048
SER 3090.0045
ASP 3100.0046
ILE 3110.0043
GLU 3120.0043
VAL 3130.0067
ASP 3140.0069
LEU 3150.0061
LEU 3160.0069
LYS 3170.0067
ASN 3180.0082
GLY 3190.0102
GLU 3200.0108
ARG 3210.0108
ILE 3220.0099
GLU 3230.0153
LYS 3240.0148
VAL 3250.0104
GLU 3260.0091
HIS 3270.0060
SER 3280.0036
ASP 3290.0047
LEU 3300.0047
SER 3310.0046
PHE 3320.0045
SER 3330.0037
LYS 3340.0050
ASP 3350.0038
TRP 3360.0024
SER 3370.0014
PHE 3380.0041
TYR 3390.0032
LEU 3400.0032
LEU 3410.0028
TYR 3420.0035
TYR 3430.0079
THR 3440.0089
GLU 3450.0099
PHE 3460.0090
THR 3470.0092
PRO 3480.0089
THR 3490.0085
GLU 3500.0114
LYS 3510.0112
ASP 3520.0083
GLU 3530.0068
TYR 3540.0063
ALA 3550.0065
CYS 3560.0063
ARG 3570.0070
VAL 3580.0049
ASN 3590.0048
HIS 3600.0049
VAL 3610.0048
THR 3620.0048
LEU 3630.0044
SER 3640.0037
GLN 3650.0037
PRO 3660.0044
LYS 3670.0053
ILE 3680.0067
VAL 3690.0062
LYS 3700.0061
TRP 3710.0065
ASP 3720.0067
ARG 3730.0084
ASP 3740.0062
MET 3750.0057
SER 10.0138
GLN 20.0122
PHE 30.0127
ARG 40.0141
VAL 50.0150
SER 60.0216
PRO 70.0245
LEU 80.0258
ASP 90.0322
ARG 100.0290
THR 110.0218
TRP 120.0191
ASN 130.0167
LEU 140.0160
GLY 150.0228
GLU 160.0264
THR 170.0272
VAL 180.0216
GLU 190.0242
LEU 200.0200
LYS 210.0160
CYS 220.0137
GLN 230.0147
VAL 240.0123
LEU 250.0156
LEU 260.0087
SER 270.0070
ASN 280.0055
PRO 290.0049
THR 300.0057
SER 310.0036
GLY 320.0023
CYS 330.0039
SER 340.0025
TRP 350.0051
LEU 360.0033
PHE 370.0037
GLN 380.0086
PRO 390.0088
ARG 400.0129
GLY 410.0173
ALA 420.0192
ALA 430.0191
ALA 440.0170
SER 450.0162
PRO 460.0111
THR 470.0072
PHE 480.0048
LEU 490.0058
LEU 500.0078
TYR 510.0061
LEU 520.0089
SER 530.0072
GLN 540.0091
ASN 550.0118
LYS 560.0136
PRO 570.0124
LYS 580.0114
ALA 590.0131
ALA 600.0126
GLU 610.0225
GLY 620.0295
LEU 630.0259
ASP 640.0322
THR 650.0294
GLN 660.0385
ARG 670.0315
PHE 680.0246
SER 690.0264
GLY 700.0240
LYS 710.0199
ARG 720.0178
LEU 730.0219
GLY 740.0197
ASP 750.0175
THR 760.0198
PHE 770.0163
VAL 780.0191
LEU 790.0173
THR 800.0220
LEU 810.0237
SER 820.0292
ASP 830.0258
PHE 840.0170
ARG 850.0132
ARG 860.0073
GLU 870.0139
ASN 880.0095
GLU 890.0060
GLY 900.0084
TYR 910.0085
TYR 920.0067
PHE 930.0085
CYS 940.0077
SER 950.0064
ALA 960.0056
LEU 970.0066
SER 980.0074
ASN 990.0091
SER 1000.0095
ILE 1010.0108
MET 1020.0089
TYR 1030.0083
PHE 1040.0087
SER 1050.0101
HIS 1060.0166
PHE 1070.0140
VAL 1080.0139
PRO 1090.0135
VAL 1100.0111
PHE 1110.0136
LEU 1120.0126
PRO 1130.0165
ALA 1140.0186
SER 10.0174
GLN 20.0155
PHE 30.0130
ARG 40.0126
VAL 50.0109
SER 60.0153
PRO 70.0161
LEU 80.0204
ASP 90.0236
ARG 100.0183
THR 110.0135
TRP 120.0122
ASN 130.0158
LEU 140.0203
GLY 150.0267
GLU 160.0213
THR 170.0182
VAL 180.0109
GLU 190.0103
LEU 200.0084
LYS 210.0072
CYS 220.0093
GLN 230.0112
VAL 240.0126
LEU 250.0159
LEU 260.0139
SER 270.0154
ASN 280.0150
PRO 290.0130
THR 300.0125
SER 310.0121
GLY 320.0101
CYS 330.0095
SER 340.0096
TRP 350.0080
LEU 360.0107
PHE 370.0124
GLN 380.0151
PRO 390.0163
ARG 400.0182
GLY 410.0199
ALA 420.0149
ALA 430.0135
ALA 440.0162
SER 450.0140
PRO 460.0131
THR 470.0114
PHE 480.0100
LEU 490.0079
LEU 500.0068
TYR 510.0092
LEU 520.0089
SER 530.0102
GLN 540.0106
ASN 550.0104
LYS 560.0100
PRO 570.0088
LYS 580.0088
ALA 590.0080
ALA 600.0086
GLU 610.0146
GLY 620.0167
LEU 630.0144
ASP 640.0158
THR 650.0122
GLN 660.0194
ARG 670.0174
PHE 680.0116
SER 690.0080
GLY 700.0050
LYS 710.0030
ARG 720.0049
LEU 730.0072
GLY 740.0100
ASP 750.0124
THR 760.0109
PHE 770.0069
VAL 780.0049
LEU 790.0033
THR 800.0061
LEU 810.0120
SER 820.0202
ASP 830.0238
PHE 840.0165
ARG 850.0197
ARG 860.0169
GLU 870.0206
ASN 880.0128
GLU 890.0094
GLY 900.0148
TYR 910.0133
TYR 920.0107
PHE 930.0113
CYS 940.0101
SER 950.0115
ALA 960.0115
LEU 970.0109
SER 980.0117
ASN 990.0110
SER 1000.0090
ILE 1010.0116
MET 1020.0108
TYR 1030.0109
PHE 1040.0109
SER 1050.0117
HIS 1060.0172
PHE 1070.0148
VAL 1080.0116
PRO 1090.0110
VAL 1100.0073
PHE 1110.0056
LEU 1120.0051
PRO 1130.0107
ALA 1140.0087

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.