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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 97  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1004
MET 10.0002
SER 20.0002
THR 30.0001
ILE 40.0002
THR 50.0001
LYS 60.0001
ASP 70.0000
GLN 80.0002
ILE 90.0002
LEU 100.0001
GLU 110.0001
GLY 120.0002
VAL 130.0001
ALA 140.0001
ALA 150.0002
LEU 160.0001
SER 170.0000
VAL 180.0000
MET 190.0000
GLU 200.0001
ILE 210.0001
VAL 220.0000
GLU 230.0001
LEU 240.0001
ILE 250.0001
SER 260.0001
ALA 270.0002
MET 280.0002
GLU 290.0002
GLU 300.0003
LYS 310.0003
PHE 320.0003
GLY 330.0003
VAL 340.0003
SER 350.0003
ALA 360.0004
ALA 370.0005
ALA 380.0010
VAL 390.0012
ALA 400.0014
ALA 410.0015
GLY 420.0022
PRO 430.0025
ALA 440.0027
ALA 450.0021
ALA 460.0019
VAL 470.0029
GLU 480.0016
ALA 490.0033
ALA 500.0047
GLU 510.0011
GLU 520.0016
GLN 530.0014
THR 540.0012
GLU 550.0013
PHE 560.0012
ASP 570.0010
VAL 580.0008
VAL 590.0008
LEU 600.0007
ALA 610.0008
SER 620.0006
PHE 630.0004
GLY 640.0007
GLU 650.0011
ASN 660.0011
LYS 670.0008
VAL 680.0011
ALA 690.0011
VAL 700.0007
ILE 710.0006
LYS 720.0010
ALA 730.0010
VAL 740.0009
ARG 750.0011
GLY 760.0012
ALA 770.0011
THR 780.0013
GLY 790.0015
LEU 800.0013
GLY 810.0013
LEU 820.0009
LYS 830.0007
GLU 840.0009
ALA 850.0007
LYS 860.0003
ASP 870.0005
LEU 880.0006
VAL 890.0004
GLU 900.0006
SER 910.0007
ALA 920.0006
PRO 930.0006
ALA 940.0006
VAL 950.0007
LEU 960.0008
LYS 970.0008
GLU 980.0010
GLY 990.0012
VAL 1000.0011
ASN 1010.0012
LYS 1020.0015
ASP 1030.0015
GLU 1040.0011
ALA 1050.0011
GLU 1060.0014
THR 1070.0014
LEU 1080.0010
LYS 1090.0010
LYS 1100.0011
SER 1110.0011
LEU 1120.0007
GLU 1130.0006
GLU 1140.0008
ALA 1150.0007
GLY 1160.0006
ALA 1170.0003
SER 1180.0004
VAL 1190.0006
GLU 1200.0010
ILE 1210.0010
LYS 1220.0011
GLU 1230.0012
ALA 1240.0013
ALA 1250.0015
ALA 1260.0024
LYS 1270.0025
ALA 1280.0026
TYR 1290.0029
LYS 1300.0030
ILE 1310.0039
ILE 1320.0038
SER 1330.0035
LEU 1340.0034
LYS 1350.0036
TYR 1360.0020
THR 1370.0020
ARG 1380.0009
LYS 1390.0010
VAL 1400.0019
CYS 1410.0026
ILE 1420.0025
GLY 1430.0026
PRO 1440.0028
GLY 1450.0032
PRO 1460.0018
GLY 1470.0047
LYS 1480.0041
ALA 1490.0031
TYR 1500.0008
LYS 1510.0010
ILE 1520.0014
ILE 1530.0015
SER 1540.0016
LEU 1550.0022
LYS 1560.0024
TYR 1570.0025
THR 1580.0025
ARG 1590.0028
LYS 1600.0029
VAL 1610.0030
CYS 1620.0019
GLY 1630.0012
PRO 1640.0031
GLY 1650.0046
PRO 1660.0099
GLY 1670.0089
GLY 1680.0067
LYS 1690.0034
ALA 1700.0010
TYR 1710.0019
LYS 1720.0018
ILE 1730.0025
ILE 1740.0032
SER 1750.0040
LEU 1760.0030
LYS 1770.0021
TYR 1780.0017
THR 1790.0008
ARG 1800.0004
LYS 1810.0017
VAL 1820.0020
GLY 1830.0031
PRO 1840.0033
GLY 1850.0033
PRO 1860.0028
GLY 1870.0026
ILE 1880.0027
ILE 1890.0027
SER 1900.0028
LEU 1910.0024
LYS 1920.0021
TYR 1930.0019
THR 1940.0026
ARG 1950.0031
LYS 1960.0037
VAL 1970.0036
CYS 1980.0034
ILE 1990.0035
GLN 2000.0034
LEU 2010.0021
GLY 2020.0019
GLY 2030.0011
PRO 2040.0008
GLY 2050.0016
PRO 2060.0015
GLY 2070.0018
ASN 2080.0018
ILE 2090.0014
LYS 2100.0017
THR 2110.0028
ALA 2120.0029
PHE 2130.0027
HIS 2140.0024
CYS 2150.0025
TYR 2160.0045
ALA 2170.0040
ALA 2180.0036
TYR 2190.0041
MET 2200.0043
THR 2210.0042
SER 2220.0048
ILE 2230.0073
LYS 2240.0079
ALA 2250.0108
CYS 2260.0500
ASP 2270.0479
LEU 2280.0159
LYS 2290.0226
LYS 2300.0352
PRO 2310.0323
LEU 2320.0101
MET 2330.0162
GLU 2340.0390
SER 2350.0398
GLY 2360.0292
TRP 2370.0150
SER 2380.0264
ASP 2390.0259
THR 2400.0396
ALA 2410.0441
HIS 2420.0322
GLY 2430.0321
LYS 2440.0281
LYS 2450.0343
SER 2460.0412
LEU 2470.0424
PRO 2480.0605
SER 2490.1004
SER 2500.0264
SER 2510.0641
SER 2520.0533
TYR 2530.0545
SER 2540.0456
TYR 2550.0457
ARG 2560.0240
ARG 2570.0217
LYS 2580.0119
LEU 2590.0215
THR 2600.0239
ASN 2610.0475
PRO 2620.0836
ALA 2630.0472
ASN 2640.0521
LYS 2650.0459
GLU 2660.0332
GLU 2670.0323
SER 2680.0323
ILE 2690.0212
LYS 2700.0292
LYS 2710.0149
GLN 2720.0327
LYS 2730.0245
TYR 2740.0250
SER 2750.0310
TYR 2760.0238
PRO 2770.0172
TRP 2780.0217
GLN 2790.0174
THR 2800.0128
SER 2810.0233
LYS 2820.0199
CYS 2830.0129
PHE 2840.0132
ASP 2880.0013
TYR 2890.0008
GLN 2900.0013
TYR 2910.0025
CYS 2970.0077
ASN 2980.0052
PRO 2990.0042
GLY 3000.0018
LYS 3010.0034
LYS 3020.0041
ASN 3030.0025
THR 3040.0050
ILE 3050.0022
SER 3060.0060
GLY 3070.0079
TYR 3080.0063
LYS 3090.0034
ARG 3100.0056
MET 3110.0063
MET 3120.0035
ALA 3130.0057
THR 3140.0062
LYS 3150.0040
ASP 3160.0053
SER 3170.0049
PHE 3180.0032
GLN 3190.0038
SER 3200.0029
PHE 3210.0036
ASN 3220.0028
LEU 3230.0029
THR 3240.0034
GLU 3250.0035
PRO 3260.0030
HIS 3270.0037
ILE 3280.0043
THR 3290.0056
THR 3300.0073
ASN 3310.0077
LYS 3320.0049
LEU 3330.0041
GLU 3340.0034
TRP 3350.0035
ILE 3360.0043
ASP 3370.0051
PRO 3380.0056
ASP 3390.0063
GLY 3400.0067
ASN 3410.0068
THR 3420.0073
ARG 3430.0052
GLY 3440.0071
GLY 3450.0076
GLY 3460.0084
GLY 10.0024
SER 20.0022
HIS 30.0017
SER 40.0014
MET 50.0010
ARG 60.0009
TYR 70.0009
PHE 80.0011
PHE 90.0012
THR 100.0014
SER 110.0014
VAL 120.0013
SER 130.0013
ARG 140.0013
PRO 150.0013
GLY 160.0017
ARG 170.0015
GLY 180.0014
GLU 190.0014
PRO 200.0014
ARG 210.0012
PHE 220.0012
ILE 230.0010
ALA 240.0010
VAL 250.0008
GLY 260.0005
TYR 270.0006
VAL 280.0006
ASP 290.0007
ASP 300.0007
THR 310.0008
GLN 320.0006
PHE 330.0006
VAL 340.0006
ARG 350.0007
PHE 360.0012
ASP 370.0011
SER 380.0014
ASP 390.0013
ALA 400.0015
ALA 410.0027
SER 420.0028
GLN 430.0026
ARG 440.0024
MET 450.0017
GLU 460.0014
PRO 470.0012
ARG 480.0011
ALA 490.0012
PRO 500.0016
TRP 510.0015
ILE 520.0012
GLU 530.0017
GLN 540.0018
GLU 550.0015
GLY 560.0024
PRO 570.0030
GLU 580.0029
TYR 590.0020
TRP 600.0023
ASP 610.0031
GLY 620.0027
GLU 630.0020
THR 640.0024
ARG 650.0030
LYS 660.0022
VAL 670.0017
LYS 680.0021
ALA 690.0025
HIS 700.0020
SER 710.0015
GLN 720.0016
THR 730.0017
HIS 740.0015
ARG 750.0014
VAL 760.0013
ASP 770.0013
LEU 780.0012
GLY 790.0011
THR 800.0011
LEU 810.0011
ARG 820.0010
GLY 830.0013
TYR 840.0011
TYR 850.0012
ASN 860.0020
GLN 870.0015
SER 880.0016
GLU 890.0012
ALA 900.0008
GLY 910.0010
SER 920.0010
HIS 930.0011
THR 940.0012
VAL 950.0013
GLN 960.0014
ARG 970.0013
MET 980.0012
TYR 990.0011
GLY 1000.0010
CYS 1010.0013
ASP 1020.0018
VAL 1030.0021
GLY 1040.0026
SER 1050.0028
ASP 1060.0029
TRP 1070.0023
ARG 1080.0024
PHE 1090.0021
LEU 1100.0024
ARG 1110.0016
GLY 1120.0012
TYR 1130.0011
HIS 1140.0011
GLN 1150.0015
TYR 1160.0013
ALA 1170.0012
TYR 1180.0011
ASP 1190.0010
GLY 1200.0010
LYS 1210.0011
ASP 1220.0009
TYR 1230.0009
ILE 1240.0009
ALA 1250.0008
LEU 1260.0011
LYS 1270.0016
GLU 1280.0017
ASP 1290.0021
LEU 1300.0017
ARG 1310.0022
SER 1320.0020
TRP 1330.0015
THR 1340.0016
ALA 1350.0015
ALA 1360.0013
ASP 1370.0015
MET 1380.0018
ALA 1390.0014
ALA 1400.0011
GLN 1410.0018
THR 1420.0014
THR 1430.0011
LYS 1440.0016
HIS 1450.0020
LYS 1460.0020
TRP 1470.0020
GLU 1480.0028
ALA 1490.0034
ALA 1500.0033
HIS 1510.0035
VAL 1520.0025
ALA 1530.0021
GLU 1540.0030
GLN 1550.0029
LEU 1560.0016
ARG 1570.0017
ALA 1580.0020
TYR 1590.0017
LEU 1600.0014
GLU 1610.0016
GLY 1620.0016
THR 1630.0014
CYS 1640.0013
VAL 1650.0015
GLU 1660.0015
TRP 1670.0013
LEU 1680.0014
ARG 1690.0016
ARG 1700.0015
TYR 1710.0011
LEU 1720.0013
GLU 1730.0015
ASN 1740.0012
GLY 1750.0009
LYS 1760.0009
GLU 1770.0005
THR 1780.0003
LEU 1790.0008
GLN 1800.0009
ARG 1810.0028
THR 1820.0031
ASP 1830.0029
ALA 1840.0036
PRO 1850.0029
LYS 1860.0030
THR 1870.0021
HIS 1880.0024
MET 1890.0025
THR 1900.0037
HIS 1910.0050
HIS 1920.0061
ALA 1930.0074
VAL 1940.0077
SER 1950.0093
ASP 1960.0098
HIS 1970.0091
GLU 1980.0077
ALA 1990.0063
THR 2000.0048
LEU 2010.0034
ARG 2020.0026
CYS 2030.0015
TRP 2040.0011
ALA 2050.0007
LEU 2060.0013
SER 2070.0017
PHE 2080.0012
TYR 2090.0011
PRO 2100.0013
ALA 2110.0014
GLU 2120.0027
ILE 2130.0023
THR 2140.0029
LEU 2150.0020
THR 2160.0024
TRP 2170.0026
GLN 2180.0034
ARG 2190.0044
ASP 2200.0044
GLY 2210.0041
GLU 2220.0042
ASP 2230.0033
GLN 2240.0032
THR 2250.0029
GLN 2260.0030
ASP 2270.0029
THR 2280.0026
GLU 2290.0023
LEU 2300.0021
VAL 2310.0014
GLU 2320.0014
THR 2330.0012
ARG 2340.0012
PRO 2350.0011
ALA 2360.0019
GLY 2370.0025
ASP 2380.0023
GLY 2390.0013
THR 2400.0008
PHE 2410.0004
GLN 2420.0007
LYS 2430.0010
TRP 2440.0012
ALA 2450.0016
ALA 2460.0025
VAL 2470.0038
VAL 2480.0049
VAL 2490.0055
PRO 2500.0069
SER 2510.0086
GLY 2520.0086
GLN 2530.0072
GLU 2540.0058
GLN 2550.0053
ARG 2560.0046
TYR 2570.0035
THR 2580.0019
CYS 2590.0011
HIS 2600.0019
VAL 2610.0025
GLN 2620.0040
HIS 2630.0037
GLU 2640.0050
GLY 2650.0048
LEU 2660.0081
PRO 2670.0124
LYS 2680.0114
PRO 2690.0079
LEU 2700.0050
THR 2710.0020
LEU 2720.0017
ARG 2730.0022
TRP 2740.0037
GLU 2750.0048
PRO 2760.0052
GLN 2780.0006
ARG 2790.0006
THR 2800.0007
PRO 2810.0008
LYS 2820.0008
ILE 2830.0010
GLN 2840.0012
VAL 2850.0015
TYR 2860.0018
SER 2870.0022
ARG 2880.0029
HIS 2890.0032
PRO 2900.0033
ALA 2910.0030
GLU 2920.0033
ASN 2930.0033
GLY 2940.0032
LYS 2950.0036
SER 2960.0034
ASN 2970.0034
PHE 2980.0027
LEU 2990.0022
ASN 3000.0019
CYS 3010.0014
TYR 3020.0013
VAL 3030.0008
SER 3040.0009
GLY 3050.0010
PHE 3060.0008
HIS 3070.0008
PRO 3080.0008
SER 3090.0009
ASP 3100.0009
ILE 3110.0009
GLU 3120.0009
VAL 3130.0013
ASP 3140.0012
LEU 3150.0014
LEU 3160.0012
LYS 3170.0013
ASN 3180.0013
GLY 3190.0009
GLU 3200.0008
ARG 3210.0012
ILE 3220.0017
GLU 3230.0026
LYS 3240.0031
VAL 3250.0024
GLU 3260.0026
HIS 3270.0020
SER 3280.0010
ASP 3290.0009
LEU 3300.0010
SER 3310.0011
PHE 3320.0012
SER 3330.0011
LYS 3340.0014
ASP 3350.0011
TRP 3360.0007
SER 3370.0006
PHE 3380.0010
TYR 3390.0011
LEU 3400.0012
LEU 3410.0013
TYR 3420.0014
TYR 3430.0024
THR 3440.0024
GLU 3450.0027
PHE 3460.0025
THR 3470.0026
PRO 3480.0028
THR 3490.0027
GLU 3500.0033
LYS 3510.0028
ASP 3520.0021
GLU 3530.0017
TYR 3540.0017
ALA 3550.0015
CYS 3560.0014
ARG 3570.0011
VAL 3580.0008
ASN 3590.0007
HIS 3600.0007
VAL 3610.0006
THR 3620.0007
LEU 3630.0006
SER 3640.0005
GLN 3650.0005
PRO 3660.0006
LYS 3670.0008
ILE 3680.0011
VAL 3690.0013
LYS 3700.0015
TRP 3710.0017
ASP 3720.0019
ARG 3730.0025
ASP 3740.0019
MET 3750.0021
SER 10.0020
GLN 20.0020
PHE 30.0020
ARG 40.0021
VAL 50.0021
SER 60.0027
PRO 70.0029
LEU 80.0029
ASP 90.0033
ARG 100.0031
THR 110.0029
TRP 120.0026
ASN 130.0024
LEU 140.0025
GLY 150.0028
GLU 160.0030
THR 170.0031
VAL 180.0026
GLU 190.0029
LEU 200.0026
LYS 210.0026
CYS 220.0023
GLN 230.0024
VAL 240.0021
LEU 250.0025
LEU 260.0021
SER 270.0019
ASN 280.0019
PRO 290.0021
THR 300.0021
SER 310.0019
GLY 320.0018
CYS 330.0017
SER 340.0011
TRP 350.0010
LEU 360.0007
PHE 370.0007
GLN 380.0011
PRO 390.0014
ARG 400.0019
GLY 410.0019
ALA 420.0014
ALA 430.0011
ALA 440.0013
SER 450.0011
PRO 460.0007
THR 470.0004
PHE 480.0004
LEU 490.0008
LEU 500.0011
TYR 510.0012
LEU 520.0021
SER 530.0027
GLN 540.0034
ASN 550.0032
LYS 560.0032
PRO 570.0026
LYS 580.0021
ALA 590.0018
ALA 600.0014
GLU 610.0027
GLY 620.0031
LEU 630.0028
ASP 640.0033
THR 650.0035
GLN 660.0042
ARG 670.0035
PHE 680.0028
SER 690.0031
GLY 700.0031
LYS 710.0029
ARG 720.0029
LEU 730.0033
GLY 740.0032
ASP 750.0029
THR 760.0029
PHE 770.0025
VAL 780.0027
LEU 790.0024
THR 800.0029
LEU 810.0028
SER 820.0033
ASP 830.0031
PHE 840.0022
ARG 850.0022
ARG 860.0017
GLU 870.0021
ASN 880.0017
GLU 890.0016
GLY 900.0018
TYR 910.0011
TYR 920.0010
PHE 930.0013
CYS 940.0015
SER 950.0015
ALA 960.0021
LEU 970.0019
SER 980.0019
ASN 990.0018
SER 1000.0019
ILE 1010.0014
MET 1020.0013
TYR 1030.0016
PHE 1040.0016
SER 1050.0019
HIS 1060.0017
PHE 1070.0016
VAL 1080.0019
PRO 1090.0019
VAL 1100.0018
PHE 1110.0022
LEU 1120.0021
PRO 1130.0024
ALA 1140.0029
SER 10.0016
GLN 20.0014
PHE 30.0008
ARG 40.0005
VAL 50.0006
SER 60.0018
PRO 70.0026
LEU 80.0027
ASP 90.0042
ARG 100.0044
THR 110.0047
TRP 120.0042
ASN 130.0048
LEU 140.0042
GLY 150.0032
GLU 160.0033
THR 170.0024
VAL 180.0019
GLU 190.0020
LEU 200.0013
LYS 210.0012
CYS 220.0007
GLN 230.0007
VAL 240.0011
LEU 250.0012
LEU 260.0017
SER 270.0019
ASN 280.0020
PRO 290.0019
THR 300.0022
SER 310.0026
GLY 320.0023
CYS 330.0020
SER 340.0019
TRP 350.0016
LEU 360.0013
PHE 370.0011
GLN 380.0015
PRO 390.0017
ARG 400.0020
GLY 410.0011
ALA 420.0010
ALA 430.0007
ALA 440.0008
SER 450.0006
PRO 460.0016
THR 470.0017
PHE 480.0018
LEU 490.0018
LEU 500.0019
TYR 510.0031
LEU 520.0032
SER 530.0033
GLN 540.0034
ASN 550.0031
LYS 560.0029
PRO 570.0029
LYS 580.0028
ALA 590.0027
ALA 600.0027
GLU 610.0032
GLY 620.0034
LEU 630.0030
ASP 640.0031
THR 650.0031
GLN 660.0030
ARG 670.0019
PHE 680.0020
SER 690.0026
GLY 700.0025
LYS 710.0026
ARG 720.0024
LEU 730.0023
GLY 740.0020
ASP 750.0014
THR 760.0014
PHE 770.0015
VAL 780.0015
LEU 790.0013
THR 800.0017
LEU 810.0010
SER 820.0012
ASP 830.0014
PHE 840.0021
ARG 850.0031
ARG 860.0049
GLU 870.0046
ASN 880.0026
GLU 890.0030
GLY 900.0023
TYR 910.0012
TYR 920.0009
PHE 930.0009
CYS 940.0011
SER 950.0015
ALA 960.0014
LEU 970.0012
SER 980.0012
ASN 990.0012
SER 1000.0013
ILE 1010.0009
MET 1020.0007
TYR 1030.0009
PHE 1040.0009
SER 1050.0011
HIS 1060.0008
PHE 1070.0010
VAL 1080.0009
PRO 1090.0017
VAL 1100.0020
PHE 1110.0035
LEU 1120.0051
PRO 1130.0068
ALA 1140.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.