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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1016
MET 10.0081
SER 20.0056
THR 30.0012
ILE 40.0043
THR 50.0062
LYS 60.0050
ASP 70.0023
GLN 80.0029
ILE 90.0021
LEU 100.0029
GLU 110.0066
GLY 120.0058
VAL 130.0030
ALA 140.0074
ALA 150.0092
LEU 160.0029
SER 170.0007
VAL 180.0041
MET 190.0052
GLU 200.0032
ILE 210.0024
VAL 220.0039
GLU 230.0037
LEU 240.0021
ILE 250.0029
SER 260.0014
ALA 270.0051
MET 280.0046
GLU 290.0012
GLU 300.0035
LYS 310.0049
PHE 320.0037
GLY 330.0046
VAL 340.0082
SER 350.0085
ALA 360.0064
ALA 370.0022
ALA 380.0011
VAL 390.0060
ALA 400.0071
ALA 410.0095
GLY 420.0134
PRO 430.0115
ALA 440.0062
ALA 450.0056
ALA 460.0064
VAL 470.0099
GLU 480.0104
ALA 490.0073
ALA 500.0085
GLU 510.0033
GLU 520.0043
GLN 530.0052
THR 540.0028
GLU 550.0068
PHE 560.0040
ASP 570.0036
VAL 580.0027
VAL 590.0022
LEU 600.0024
ALA 610.0030
SER 620.0015
PHE 630.0012
GLY 640.0024
GLU 650.0040
ASN 660.0050
LYS 670.0043
VAL 680.0055
ALA 690.0051
VAL 700.0028
ILE 710.0033
LYS 720.0050
ALA 730.0048
VAL 740.0020
ARG 750.0011
GLY 760.0047
ALA 770.0061
THR 780.0051
GLY 790.0029
LEU 800.0041
GLY 810.0083
LEU 820.0091
LYS 830.0120
GLU 840.0099
ALA 850.0046
LYS 860.0052
ASP 870.0059
LEU 880.0044
VAL 890.0016
GLU 900.0025
SER 910.0029
ALA 920.0026
PRO 930.0032
ALA 940.0028
VAL 950.0028
LEU 960.0038
LYS 970.0048
GLU 980.0056
GLY 990.0063
VAL 1000.0052
ASN 1010.0050
LYS 1020.0034
ASP 1030.0044
GLU 1040.0050
ALA 1050.0035
GLU 1060.0042
THR 1070.0046
LEU 1080.0038
LYS 1090.0030
LYS 1100.0036
SER 1110.0042
LEU 1120.0026
GLU 1130.0032
GLU 1140.0046
ALA 1150.0037
GLY 1160.0027
ALA 1170.0017
SER 1180.0017
VAL 1190.0019
GLU 1200.0038
ILE 1210.0021
LYS 1220.0027
GLU 1230.0048
ALA 1240.0059
ALA 1250.0070
ALA 1260.0149
LYS 1270.0169
ALA 1280.0192
TYR 1290.0219
LYS 1300.0247
ILE 1310.0256
ILE 1320.0272
SER 1330.0223
LEU 1340.0220
LYS 1350.0185
TYR 1360.0121
THR 1370.0088
ARG 1380.0096
LYS 1390.0094
VAL 1400.0141
CYS 1410.0135
ILE 1420.0097
GLY 1430.0151
PRO 1440.0184
GLY 1450.0275
PRO 1460.0284
GLY 1470.0258
LYS 1480.0269
ALA 1490.0216
TYR 1500.0123
LYS 1510.0120
ILE 1520.0110
ILE 1530.0148
SER 1540.0149
LEU 1550.0186
LYS 1560.0106
TYR 1570.0082
THR 1580.0048
ARG 1590.0028
LYS 1600.0011
VAL 1610.0014
CYS 1620.0303
GLY 1630.0596
PRO 1640.0700
GLY 1650.0720
PRO 1660.0975
GLY 1670.0511
GLY 1680.1016
LYS 1690.0687
ALA 1700.0555
TYR 1710.0316
LYS 1720.0212
ILE 1730.0161
ILE 1740.0061
SER 1750.0116
LEU 1760.0214
LYS 1770.0207
TYR 1780.0213
THR 1790.0194
ARG 1800.0201
LYS 1810.0169
VAL 1820.0112
GLY 1830.0178
PRO 1840.0199
GLY 1850.0142
PRO 1860.0070
GLY 1870.0090
ILE 1880.0092
ILE 1890.0115
SER 1900.0114
LEU 1910.0110
LYS 1920.0053
TYR 1930.0059
THR 1940.0072
ARG 1950.0113
LYS 1960.0170
VAL 1970.0195
CYS 1980.0191
ILE 1990.0243
GLN 2000.0237
LEU 2010.0186
GLY 2020.0151
GLY 2030.0080
PRO 2040.0034
GLY 2050.0081
PRO 2060.0036
GLY 2070.0049
ASN 2080.0060
ILE 2090.0051
LYS 2100.0042
THR 2110.0053
ALA 2120.0049
PHE 2130.0042
HIS 2140.0043
CYS 2150.0043
TYR 2160.0048
ALA 2170.0035
ALA 2180.0053
TYR 2190.0050
MET 2200.0030
THR 2210.0058
SER 2220.0068
ILE 2230.0059
LYS 2240.0080
ALA 2250.0080
CYS 2260.0088
ASP 2270.0076
LEU 2280.0044
LYS 2290.0043
LYS 2300.0043
PRO 2310.0032
LEU 2320.0035
MET 2330.0029
GLU 2340.0033
SER 2350.0033
GLY 2360.0014
TRP 2370.0010
SER 2380.0016
ASP 2390.0016
THR 2400.0018
ALA 2410.0025
HIS 2420.0019
GLY 2430.0015
LYS 2440.0012
LYS 2450.0011
SER 2460.0005
LEU 2470.0011
PRO 2480.0014
SER 2490.0021
SER 2500.0007
SER 2510.0017
SER 2520.0011
TYR 2530.0010
SER 2540.0009
TYR 2550.0010
ARG 2560.0013
ARG 2570.0014
LYS 2580.0015
LEU 2590.0015
THR 2600.0016
ASN 2610.0023
PRO 2620.0039
ALA 2630.0024
ASN 2640.0031
LYS 2650.0022
GLU 2660.0016
GLU 2670.0012
SER 2680.0012
ILE 2690.0011
LYS 2700.0011
LYS 2710.0012
GLN 2720.0008
LYS 2730.0007
TYR 2740.0004
SER 2750.0006
TYR 2760.0010
PRO 2770.0011
TRP 2780.0002
GLN 2790.0009
THR 2800.0013
SER 2810.0008
LYS 2820.0013
CYS 2830.0011
PHE 2840.0020
ASP 2880.0264
TYR 2890.0170
GLN 2900.0184
TYR 2910.0460
CYS 2970.0061
ASN 2980.0043
PRO 2990.0085
GLY 3000.0081
LYS 3010.0056
LYS 3020.0082
ASN 3030.0048
THR 3040.0054
ILE 3050.0052
SER 3060.0043
GLY 3070.0084
TYR 3080.0056
LYS 3090.0043
ARG 3100.0067
MET 3110.0050
MET 3120.0062
ALA 3130.0107
THR 3140.0115
LYS 3150.0099
ASP 3160.0149
SER 3170.0092
PHE 3180.0058
GLN 3190.0036
SER 3200.0078
PHE 3210.0102
ASN 3220.0092
LEU 3230.0093
THR 3240.0110
GLU 3250.0111
PRO 3260.0093
HIS 3270.0097
ILE 3280.0053
THR 3290.0023
THR 3300.0037
ASN 3310.0060
LYS 3320.0044
LEU 3330.0043
GLU 3340.0080
TRP 3350.0098
ILE 3360.0129
ASP 3370.0132
PRO 3380.0148
ASP 3390.0167
GLY 3400.0171
ASN 3410.0176
THR 3420.0207
ARG 3430.0177
GLY 3440.0216
GLY 3450.0193
GLY 3460.0241
GLY 10.0096
SER 20.0078
HIS 30.0057
SER 40.0038
MET 50.0016
ARG 60.0008
TYR 70.0006
PHE 80.0011
PHE 90.0022
THR 100.0031
SER 110.0047
VAL 120.0094
SER 130.0153
ARG 140.0236
PRO 150.0281
GLY 160.0585
ARG 170.0513
GLY 180.0415
GLU 190.0296
PRO 200.0175
ARG 210.0122
PHE 220.0089
ILE 230.0057
ALA 240.0025
VAL 250.0018
GLY 260.0004
TYR 270.0016
VAL 280.0030
ASP 290.0041
ASP 300.0038
THR 310.0056
GLN 320.0038
PHE 330.0045
VAL 340.0036
ARG 350.0023
PHE 360.0028
ASP 370.0055
SER 380.0102
ASP 390.0119
ALA 400.0076
ALA 410.0033
SER 420.0047
GLN 430.0080
ARG 440.0086
MET 450.0077
GLU 460.0083
PRO 470.0094
ARG 480.0086
ALA 490.0120
PRO 500.0158
TRP 510.0163
ILE 520.0138
GLU 530.0183
GLN 540.0215
GLU 550.0195
GLY 560.0250
PRO 570.0241
GLU 580.0253
TYR 590.0204
TRP 600.0172
ASP 610.0181
GLY 620.0191
GLU 630.0141
THR 640.0124
ARG 650.0167
LYS 660.0122
VAL 670.0082
LYS 680.0103
ALA 690.0137
HIS 700.0111
SER 710.0110
GLN 720.0161
THR 730.0148
HIS 740.0100
ARG 750.0148
VAL 760.0126
ASP 770.0092
LEU 780.0065
GLY 790.0085
THR 800.0096
LEU 810.0080
ARG 820.0089
GLY 830.0139
TYR 840.0134
TYR 850.0133
ASN 860.0203
GLN 870.0147
SER 880.0146
GLU 890.0131
ALA 900.0077
GLY 910.0038
SER 920.0054
HIS 930.0026
THR 940.0030
VAL 950.0016
GLN 960.0010
ARG 970.0006
MET 980.0004
TYR 990.0005
GLY 1000.0007
CYS 1010.0036
ASP 1020.0052
VAL 1030.0059
GLY 1040.0082
SER 1050.0092
ASP 1060.0087
TRP 1070.0061
ARG 1080.0062
PHE 1090.0066
LEU 1100.0089
ARG 1110.0060
GLY 1120.0048
TYR 1130.0035
HIS 1140.0026
GLN 1150.0016
TYR 1160.0020
ALA 1170.0017
TYR 1180.0018
ASP 1190.0020
GLY 1200.0028
LYS 1210.0029
ASP 1220.0027
TYR 1230.0036
ILE 1240.0036
ALA 1250.0021
LEU 1260.0027
LYS 1270.0053
GLU 1280.0080
ASP 1290.0097
LEU 1300.0076
ARG 1310.0088
SER 1320.0051
TRP 1330.0017
THR 1340.0035
ALA 1350.0059
ALA 1360.0072
ASP 1370.0084
MET 1380.0100
ALA 1390.0093
ALA 1400.0075
GLN 1410.0096
THR 1420.0115
THR 1430.0093
LYS 1440.0069
HIS 1450.0093
LYS 1460.0107
TRP 1470.0084
GLU 1480.0063
ALA 1490.0099
ALA 1500.0123
HIS 1510.0117
VAL 1520.0107
ALA 1530.0085
GLU 1540.0125
GLN 1550.0143
LEU 1560.0080
ARG 1570.0095
ALA 1580.0105
TYR 1590.0073
LEU 1600.0059
GLU 1610.0079
GLY 1620.0068
THR 1630.0056
CYS 1640.0030
VAL 1650.0030
GLU 1660.0022
TRP 1670.0039
LEU 1680.0023
ARG 1690.0041
ARG 1700.0061
TYR 1710.0062
LEU 1720.0068
GLU 1730.0084
ASN 1740.0099
GLY 1750.0105
LYS 1760.0100
GLU 1770.0108
THR 1780.0080
LEU 1790.0065
GLN 1800.0089
ARG 1810.0023
THR 1820.0035
ASP 1830.0049
ALA 1840.0063
PRO 1850.0072
LYS 1860.0108
THR 1870.0096
HIS 1880.0092
MET 1890.0077
THR 1900.0070
HIS 1910.0045
HIS 1920.0031
ALA 1930.0044
VAL 1940.0086
SER 1950.0114
ASP 1960.0140
HIS 1970.0135
GLU 1980.0093
ALA 1990.0048
THR 2000.0019
LEU 2010.0036
ARG 2020.0039
CYS 2030.0053
TRP 2040.0066
ALA 2050.0077
LEU 2060.0070
SER 2070.0064
PHE 2080.0052
TYR 2090.0040
PRO 2100.0031
ALA 2110.0048
GLU 2120.0040
ILE 2130.0043
THR 2140.0040
LEU 2150.0044
THR 2160.0056
TRP 2170.0058
GLN 2180.0083
ARG 2190.0103
ASP 2200.0135
GLY 2210.0105
GLU 2220.0084
ASP 2230.0063
GLN 2240.0047
THR 2250.0033
GLN 2260.0018
ASP 2270.0017
THR 2280.0023
GLU 2290.0026
LEU 2300.0036
VAL 2310.0045
GLU 2320.0046
THR 2330.0045
ARG 2340.0044
PRO 2350.0044
ALA 2360.0051
GLY 2370.0051
ASP 2380.0051
GLY 2390.0053
THR 2400.0052
PHE 2410.0050
GLN 2420.0050
LYS 2430.0046
TRP 2440.0046
ALA 2450.0043
ALA 2460.0032
VAL 2470.0024
VAL 2480.0046
VAL 2490.0070
PRO 2500.0102
SER 2510.0111
GLY 2520.0152
GLN 2530.0155
GLU 2540.0122
GLN 2550.0169
ARG 2560.0143
TYR 2570.0107
THR 2580.0108
CYS 2590.0086
HIS 2600.0091
VAL 2610.0060
GLN 2620.0049
HIS 2630.0050
GLU 2640.0047
GLY 2650.0066
LEU 2660.0100
PRO 2670.0116
LYS 2680.0114
PRO 2690.0094
LEU 2700.0101
THR 2710.0137
LEU 2720.0140
ARG 2730.0160
TRP 2740.0139
GLU 2750.0197
PRO 2760.0321
GLN 2780.0052
ARG 2790.0049
THR 2800.0056
PRO 2810.0055
LYS 2820.0060
ILE 2830.0050
GLN 2840.0038
VAL 2850.0031
TYR 2860.0021
SER 2870.0018
ARG 2880.0031
HIS 2890.0037
PRO 2900.0055
ALA 2910.0058
GLU 2920.0083
ASN 2930.0110
GLY 2940.0101
LYS 2950.0068
SER 2960.0040
ASN 2970.0024
PHE 2980.0028
LEU 2990.0032
ASN 3000.0035
CYS 3010.0042
TYR 3020.0048
VAL 3030.0056
SER 3040.0054
GLY 3050.0053
PHE 3060.0052
HIS 3070.0050
PRO 3080.0072
SER 3090.0070
ASP 3100.0069
ILE 3110.0063
GLU 3120.0059
VAL 3130.0093
ASP 3140.0088
LEU 3150.0070
LEU 3160.0082
LYS 3170.0099
ASN 3180.0133
GLY 3190.0131
GLU 3200.0146
ARG 3210.0136
ILE 3220.0121
GLU 3230.0108
LYS 3240.0103
VAL 3250.0078
GLU 3260.0081
HIS 3270.0079
SER 3280.0065
ASP 3290.0050
LEU 3300.0046
SER 3310.0042
PHE 3320.0041
SER 3330.0022
LYS 3340.0021
ASP 3350.0026
TRP 3360.0023
SER 3370.0029
PHE 3380.0054
TYR 3390.0053
LEU 3400.0053
LEU 3410.0052
TYR 3420.0051
TYR 3430.0058
THR 3440.0060
GLU 3450.0049
PHE 3460.0054
THR 3470.0061
PRO 3480.0077
THR 3490.0133
GLU 3500.0176
LYS 3510.0200
ASP 3520.0154
GLU 3530.0086
TYR 3540.0063
ALA 3550.0048
CYS 3560.0050
ARG 3570.0067
VAL 3580.0057
ASN 3590.0060
HIS 3600.0065
VAL 3610.0068
THR 3620.0065
LEU 3630.0054
SER 3640.0045
GLN 3650.0040
PRO 3660.0044
LYS 3670.0044
ILE 3680.0040
VAL 3690.0029
LYS 3700.0027
TRP 3710.0023
ASP 3720.0020
ARG 3730.0029
ASP 3740.0020
MET 3750.0041
SER 10.0015
GLN 20.0013
PHE 30.0012
ARG 40.0013
VAL 50.0012
SER 60.0038
PRO 70.0041
LEU 80.0049
ASP 90.0052
ARG 100.0053
THR 110.0068
TRP 120.0067
ASN 130.0072
LEU 140.0075
GLY 150.0065
GLU 160.0046
THR 170.0039
VAL 180.0037
GLU 190.0033
LEU 200.0035
LYS 210.0011
CYS 220.0011
GLN 230.0012
VAL 240.0012
LEU 250.0013
LEU 260.0020
SER 270.0029
ASN 280.0030
PRO 290.0024
THR 300.0026
SER 310.0032
GLY 320.0025
CYS 330.0020
SER 340.0017
TRP 350.0012
LEU 360.0022
PHE 370.0023
GLN 380.0028
PRO 390.0030
ARG 400.0039
GLY 410.0026
ALA 420.0036
ALA 430.0041
ALA 440.0032
SER 450.0034
PRO 460.0023
THR 470.0018
PHE 480.0020
LEU 490.0016
LEU 500.0017
TYR 510.0020
LEU 520.0018
SER 530.0025
GLN 540.0028
ASN 550.0032
LYS 560.0033
PRO 570.0025
LYS 580.0030
ALA 590.0024
ALA 600.0024
GLU 610.0035
GLY 620.0036
LEU 630.0028
ASP 640.0031
THR 650.0028
GLN 660.0036
ARG 670.0027
PHE 680.0021
SER 690.0023
GLY 700.0022
LYS 710.0012
ARG 720.0012
LEU 730.0015
GLY 740.0019
ASP 750.0021
THR 760.0022
PHE 770.0017
VAL 780.0017
LEU 790.0015
THR 800.0019
LEU 810.0031
SER 820.0031
ASP 830.0040
PHE 840.0046
ARG 850.0055
ARG 860.0060
GLU 870.0060
ASN 880.0048
GLU 890.0053
GLY 900.0057
TYR 910.0033
TYR 920.0027
PHE 930.0027
CYS 940.0025
SER 950.0029
ALA 960.0019
LEU 970.0020
SER 980.0023
ASN 990.0023
SER 1000.0018
ILE 1010.0028
MET 1020.0023
TYR 1030.0019
PHE 1040.0015
SER 1050.0014
HIS 1060.0038
PHE 1070.0038
VAL 1080.0038
PRO 1090.0037
VAL 1100.0038
PHE 1110.0069
LEU 1120.0070
PRO 1130.0071
ALA 1140.0073
SER 10.0041
GLN 20.0038
PHE 30.0036
ARG 40.0035
VAL 50.0034
SER 60.0030
PRO 70.0029
LEU 80.0031
ASP 90.0030
ARG 100.0030
THR 110.0030
TRP 120.0038
ASN 130.0049
LEU 140.0063
GLY 150.0068
GLU 160.0052
THR 170.0045
VAL 180.0035
GLU 190.0027
LEU 200.0024
LYS 210.0026
CYS 220.0028
GLN 230.0029
VAL 240.0031
LEU 250.0034
LEU 260.0036
SER 270.0037
ASN 280.0032
PRO 290.0027
THR 300.0022
SER 310.0027
GLY 320.0026
CYS 330.0026
SER 340.0028
TRP 350.0027
LEU 360.0035
PHE 370.0036
GLN 380.0036
PRO 390.0037
ARG 400.0039
GLY 410.0021
ALA 420.0031
ALA 430.0043
ALA 440.0025
SER 450.0024
PRO 460.0024
THR 470.0024
PHE 480.0024
LEU 490.0024
LEU 500.0024
TYR 510.0021
LEU 520.0011
SER 530.0011
GLN 540.0021
ASN 550.0017
LYS 560.0009
PRO 570.0007
LYS 580.0013
ALA 590.0024
ALA 600.0036
GLU 610.0047
GLY 620.0050
LEU 630.0044
ASP 640.0044
THR 650.0038
GLN 660.0049
ARG 670.0046
PHE 680.0037
SER 690.0024
GLY 700.0014
LYS 710.0013
ARG 720.0014
LEU 730.0017
GLY 740.0020
ASP 750.0022
THR 760.0020
PHE 770.0020
VAL 780.0020
LEU 790.0024
THR 800.0027
LEU 810.0040
SER 820.0050
ASP 830.0061
PHE 840.0054
ARG 850.0067
ARG 860.0065
GLU 870.0070
ASN 880.0054
GLU 890.0048
GLY 900.0050
TYR 910.0037
TYR 920.0035
PHE 930.0036
CYS 940.0035
SER 950.0037
ALA 960.0034
LEU 970.0038
SER 980.0043
ASN 990.0049
SER 1000.0041
ILE 1010.0036
MET 1020.0035
TYR 1030.0034
PHE 1040.0033
SER 1050.0035
HIS 1060.0040
PHE 1070.0039
VAL 1080.0035
PRO 1090.0036
VAL 1100.0034
PHE 1110.0040
LEU 1120.0041
PRO 1130.0036
ALA 1140.0042

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.