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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0618
MET 10.0027
SER 20.0020
THR 30.0006
ILE 40.0017
THR 50.0018
LYS 60.0015
ASP 70.0007
GLN 80.0013
ILE 90.0012
LEU 100.0007
GLU 110.0020
GLY 120.0019
VAL 130.0007
ALA 140.0021
ALA 150.0028
LEU 160.0009
SER 170.0003
VAL 180.0007
MET 190.0009
GLU 200.0007
ILE 210.0005
VAL 220.0007
GLU 230.0007
LEU 240.0005
ILE 250.0006
SER 260.0007
ALA 270.0017
MET 280.0008
GLU 290.0010
GLU 300.0021
LYS 310.0019
PHE 320.0007
GLY 330.0028
VAL 340.0032
SER 350.0033
ALA 360.0026
ALA 370.0021
ALA 380.0044
VAL 390.0055
ALA 400.0048
ALA 410.0039
GLY 420.0079
PRO 430.0106
ALA 440.0095
ALA 450.0071
ALA 460.0089
VAL 470.0119
GLU 480.0077
ALA 490.0162
ALA 500.0220
GLU 510.0050
GLU 520.0056
GLN 530.0047
THR 540.0037
GLU 550.0037
PHE 560.0024
ASP 570.0021
VAL 580.0015
VAL 590.0016
LEU 600.0014
ALA 610.0016
SER 620.0019
PHE 630.0021
GLY 640.0033
GLU 650.0047
ASN 660.0047
LYS 670.0042
VAL 680.0050
ALA 690.0047
VAL 700.0033
ILE 710.0030
LYS 720.0039
ALA 730.0035
VAL 740.0026
ARG 750.0031
GLY 760.0034
ALA 770.0028
THR 780.0024
GLY 790.0029
LEU 800.0021
GLY 810.0025
LEU 820.0029
LYS 830.0023
GLU 840.0015
ALA 850.0018
LYS 860.0015
ASP 870.0012
LEU 880.0011
VAL 890.0011
GLU 900.0011
SER 910.0013
ALA 920.0012
PRO 930.0012
ALA 940.0012
VAL 950.0012
LEU 960.0012
LYS 970.0013
GLU 980.0021
GLY 990.0026
VAL 1000.0023
ASN 1010.0029
LYS 1020.0033
ASP 1030.0034
GLU 1040.0024
ALA 1050.0020
GLU 1060.0031
THR 1070.0034
LEU 1080.0023
LYS 1090.0020
LYS 1100.0032
SER 1110.0035
LEU 1120.0025
GLU 1130.0025
GLU 1140.0037
ALA 1150.0037
GLY 1160.0031
ALA 1170.0021
SER 1180.0013
VAL 1190.0007
GLU 1200.0015
ILE 1210.0017
LYS 1220.0023
GLU 1230.0030
ALA 1240.0038
ALA 1250.0044
ALA 1260.0059
LYS 1270.0061
ALA 1280.0058
TYR 1290.0063
LYS 1300.0061
ILE 1310.0076
ILE 1320.0087
SER 1330.0078
LEU 1340.0084
LYS 1350.0078
TYR 1360.0062
THR 1370.0045
ARG 1380.0050
LYS 1390.0039
VAL 1400.0057
CYS 1410.0048
ILE 1420.0035
GLY 1430.0054
PRO 1440.0070
GLY 1450.0103
PRO 1460.0077
GLY 1470.0093
LYS 1480.0103
ALA 1490.0088
TYR 1500.0043
LYS 1510.0048
ILE 1520.0044
ILE 1530.0056
SER 1540.0054
LEU 1550.0066
LYS 1560.0034
TYR 1570.0030
THR 1580.0017
ARG 1590.0021
LYS 1600.0018
VAL 1610.0014
CYS 1620.0106
GLY 1630.0200
PRO 1640.0237
GLY 1650.0249
PRO 1660.0343
GLY 1670.0186
GLY 1680.0353
LYS 1690.0234
ALA 1700.0186
TYR 1710.0115
LYS 1720.0080
ILE 1730.0060
ILE 1740.0028
SER 1750.0040
LEU 1760.0075
LYS 1770.0073
TYR 1780.0078
THR 1790.0073
ARG 1800.0077
LYS 1810.0074
VAL 1820.0052
GLY 1830.0077
PRO 1840.0084
GLY 1850.0068
PRO 1860.0030
GLY 1870.0035
ILE 1880.0031
ILE 1890.0039
SER 1900.0034
LEU 1910.0038
LYS 1920.0021
TYR 1930.0030
THR 1940.0033
ARG 1950.0047
LYS 1960.0065
VAL 1970.0068
CYS 1980.0062
ILE 1990.0070
GLN 2000.0065
LEU 2010.0053
GLY 2020.0051
GLY 2030.0029
PRO 2040.0032
GLY 2050.0057
PRO 2060.0078
GLY 2070.0092
ASN 2080.0089
ILE 2090.0072
LYS 2100.0085
THR 2110.0125
ALA 2120.0127
PHE 2130.0102
HIS 2140.0097
CYS 2150.0114
TYR 2160.0133
ALA 2170.0109
ALA 2180.0112
TYR 2190.0132
MET 2200.0123
THR 2210.0130
SER 2220.0147
ILE 2230.0146
LYS 2240.0155
ALA 2250.0154
CYS 2260.0233
ASP 2270.0311
LEU 2280.0149
LYS 2290.0135
LYS 2300.0265
PRO 2310.0146
LEU 2320.0159
MET 2330.0117
GLU 2340.0254
SER 2350.0340
GLY 2360.0082
TRP 2370.0077
SER 2380.0072
ASP 2390.0073
THR 2400.0071
ALA 2410.0109
HIS 2420.0106
GLY 2430.0100
LYS 2440.0089
LYS 2450.0084
SER 2460.0084
LEU 2470.0082
PRO 2480.0080
SER 2490.0156
SER 2500.0065
SER 2510.0108
SER 2520.0102
TYR 2530.0099
SER 2540.0095
TYR 2550.0092
ARG 2560.0071
ARG 2570.0056
LYS 2580.0045
LEU 2590.0031
THR 2600.0020
ASN 2610.0060
PRO 2620.0078
ALA 2630.0091
ASN 2640.0060
LYS 2650.0078
GLU 2660.0079
GLU 2670.0100
SER 2680.0086
ILE 2690.0084
LYS 2700.0101
LYS 2710.0047
GLN 2720.0055
LYS 2730.0044
TYR 2740.0067
SER 2750.0071
TYR 2760.0073
PRO 2770.0045
TRP 2780.0052
GLN 2790.0039
THR 2800.0014
SER 2810.0062
LYS 2820.0034
CYS 2830.0025
PHE 2840.0016
ASP 2880.0089
TYR 2890.0058
GLN 2900.0063
TYR 2910.0157
CYS 2970.0019
ASN 2980.0027
PRO 2990.0038
GLY 3000.0052
LYS 3010.0037
LYS 3020.0037
ASN 3030.0031
THR 3040.0040
ILE 3050.0041
SER 3060.0040
GLY 3070.0039
TYR 3080.0049
LYS 3090.0038
ARG 3100.0026
MET 3110.0039
MET 3120.0046
ALA 3130.0046
THR 3140.0053
LYS 3150.0060
ASP 3160.0076
SER 3170.0052
PHE 3180.0035
GLN 3190.0047
SER 3200.0097
PHE 3210.0137
ASN 3220.0130
LEU 3230.0176
THR 3240.0278
GLU 3250.0327
PRO 3260.0244
HIS 3270.0309
ILE 3280.0223
THR 3290.0176
THR 3300.0327
ASN 3310.0322
LYS 3320.0176
LEU 3330.0082
GLU 3340.0195
TRP 3350.0227
ILE 3360.0360
ASP 3370.0246
PRO 3380.0271
ASP 3390.0261
GLY 3400.0276
ASN 3410.0239
THR 3420.0316
ARG 3430.0263
GLY 3440.0292
GLY 3450.0325
GLY 3460.0299
GLY 10.0104
SER 20.0096
HIS 30.0076
SER 40.0066
MET 50.0050
ARG 60.0053
TYR 70.0055
PHE 80.0062
PHE 90.0066
THR 100.0073
SER 110.0072
VAL 120.0066
SER 130.0063
ARG 140.0060
PRO 150.0058
GLY 160.0064
ARG 170.0066
GLY 180.0070
GLU 190.0072
PRO 200.0072
ARG 210.0072
PHE 220.0070
ILE 230.0063
ALA 240.0061
VAL 250.0056
GLY 260.0028
TYR 270.0034
VAL 280.0035
ASP 290.0046
ASP 300.0048
THR 310.0044
GLN 320.0041
PHE 330.0032
VAL 340.0031
ARG 350.0037
PHE 360.0060
ASP 370.0063
SER 380.0071
ASP 390.0067
ALA 400.0060
ALA 410.0065
SER 420.0062
GLN 430.0072
ARG 440.0064
MET 450.0055
GLU 460.0037
PRO 470.0030
ARG 480.0031
ALA 490.0028
PRO 500.0023
TRP 510.0022
ILE 520.0021
GLU 530.0015
GLN 540.0016
GLU 550.0015
GLY 560.0033
PRO 570.0050
GLU 580.0054
TYR 590.0043
TRP 600.0048
ASP 610.0072
GLY 620.0074
GLU 630.0066
THR 640.0072
ARG 650.0090
LYS 660.0082
VAL 670.0075
LYS 680.0081
ALA 690.0091
HIS 700.0086
SER 710.0077
GLN 720.0079
THR 730.0080
HIS 740.0074
ARG 750.0071
VAL 760.0066
ASP 770.0061
LEU 780.0057
GLY 790.0053
THR 800.0050
LEU 810.0047
ARG 820.0044
GLY 830.0047
TYR 840.0045
TYR 850.0048
ASN 860.0050
GLN 870.0040
SER 880.0040
GLU 890.0031
ALA 900.0030
GLY 910.0049
SER 920.0051
HIS 930.0052
THR 940.0059
VAL 950.0063
GLN 960.0064
ARG 970.0063
MET 980.0062
TYR 990.0062
GLY 1000.0061
CYS 1010.0057
ASP 1020.0074
VAL 1030.0078
GLY 1040.0099
SER 1050.0109
ASP 1060.0107
TRP 1070.0085
ARG 1080.0083
PHE 1090.0072
LEU 1100.0087
ARG 1110.0059
GLY 1120.0048
TYR 1130.0055
HIS 1140.0058
GLN 1150.0077
TYR 1160.0064
ALA 1170.0056
TYR 1180.0051
ASP 1190.0051
GLY 1200.0055
LYS 1210.0056
ASP 1220.0046
TYR 1230.0041
ILE 1240.0040
ALA 1250.0043
LEU 1260.0047
LYS 1270.0066
GLU 1280.0068
ASP 1290.0080
LEU 1300.0064
ARG 1310.0090
SER 1320.0084
TRP 1330.0065
THR 1340.0072
ALA 1350.0066
ALA 1360.0062
ASP 1370.0072
MET 1380.0084
ALA 1390.0067
ALA 1400.0051
GLN 1410.0086
THR 1420.0071
THR 1430.0056
LYS 1440.0077
HIS 1450.0099
LYS 1460.0099
TRP 1470.0096
GLU 1480.0134
ALA 1490.0163
ALA 1500.0157
HIS 1510.0159
VAL 1520.0116
ALA 1530.0090
GLU 1540.0127
GLN 1550.0133
LEU 1560.0070
ARG 1570.0068
ALA 1580.0079
TYR 1590.0074
LEU 1600.0060
GLU 1610.0057
GLY 1620.0053
THR 1630.0051
CYS 1640.0056
VAL 1650.0059
GLU 1660.0056
TRP 1670.0050
LEU 1680.0058
ARG 1690.0061
ARG 1700.0052
TYR 1710.0043
LEU 1720.0054
GLU 1730.0052
ASN 1740.0038
GLY 1750.0038
LYS 1760.0037
GLU 1770.0023
THR 1780.0029
LEU 1790.0043
GLN 1800.0043
ARG 1810.0072
THR 1820.0079
ASP 1830.0072
ALA 1840.0083
PRO 1850.0076
LYS 1860.0123
THR 1870.0115
HIS 1880.0134
MET 1890.0139
THR 1900.0158
HIS 1910.0170
HIS 1920.0150
ALA 1930.0200
VAL 1940.0186
SER 1950.0258
ASP 1960.0311
HIS 1970.0320
GLU 1980.0252
ALA 1990.0198
THR 2000.0134
LEU 2010.0122
ARG 2020.0089
CYS 2030.0081
TRP 2040.0086
ALA 2050.0090
LEU 2060.0065
SER 2070.0059
PHE 2080.0062
TYR 2090.0061
PRO 2100.0064
ALA 2110.0074
GLU 2120.0094
ILE 2130.0087
THR 2140.0095
LEU 2150.0080
THR 2160.0072
TRP 2170.0101
GLN 2180.0148
ARG 2190.0218
ASP 2200.0251
GLY 2210.0156
GLU 2220.0153
ASP 2230.0115
GLN 2240.0117
THR 2250.0109
GLN 2260.0089
ASP 2270.0082
THR 2280.0071
GLU 2290.0070
LEU 2300.0072
VAL 2310.0055
GLU 2320.0055
THR 2330.0054
ARG 2340.0044
PRO 2350.0041
ALA 2360.0030
GLY 2370.0034
ASP 2380.0025
GLY 2390.0037
THR 2400.0052
PHE 2410.0056
GLN 2420.0047
LYS 2430.0046
TRP 2440.0046
ALA 2450.0054
ALA 2460.0076
VAL 2470.0111
VAL 2480.0152
VAL 2490.0206
PRO 2500.0272
SER 2510.0376
GLY 2520.0453
GLN 2530.0404
GLU 2540.0336
GLN 2550.0398
ARG 2560.0321
TYR 2570.0233
THR 2580.0184
CYS 2590.0117
HIS 2600.0085
VAL 2610.0097
GLN 2620.0117
HIS 2630.0115
GLU 2640.0136
GLY 2650.0132
LEU 2660.0197
PRO 2670.0272
LYS 2680.0234
PRO 2690.0166
LEU 2700.0117
THR 2710.0152
LEU 2720.0214
ARG 2730.0286
TRP 2740.0305
GLU 2750.0430
PRO 2760.0618
GLN 2780.0049
ARG 2790.0048
THR 2800.0047
PRO 2810.0047
LYS 2820.0053
ILE 2830.0046
GLN 2840.0044
VAL 2850.0051
TYR 2860.0061
SER 2870.0072
ARG 2880.0082
HIS 2890.0116
PRO 2900.0136
ALA 2910.0134
GLU 2920.0169
ASN 2930.0169
GLY 2940.0193
LYS 2950.0198
SER 2960.0180
ASN 2970.0146
PHE 2980.0106
LEU 2990.0082
ASN 3000.0064
CYS 3010.0045
TYR 3020.0042
VAL 3030.0041
SER 3040.0049
GLY 3050.0054
PHE 3060.0044
HIS 3070.0037
PRO 3080.0036
SER 3090.0032
ASP 3100.0027
ILE 3110.0026
GLU 3120.0027
VAL 3130.0055
ASP 3140.0060
LEU 3150.0060
LEU 3160.0062
LYS 3170.0073
ASN 3180.0070
GLY 3190.0070
GLU 3200.0095
ARG 3210.0101
ILE 3220.0112
GLU 3230.0150
LYS 3240.0158
VAL 3250.0114
GLU 3260.0107
HIS 3270.0068
SER 3280.0046
ASP 3290.0050
LEU 3300.0046
SER 3310.0052
PHE 3320.0053
SER 3330.0074
LYS 3340.0085
ASP 3350.0070
TRP 3360.0044
SER 3370.0049
PHE 3380.0038
TYR 3390.0041
LEU 3400.0038
LEU 3410.0042
TYR 3420.0038
TYR 3430.0087
THR 3440.0110
GLU 3450.0134
PHE 3460.0132
THR 3470.0146
PRO 3480.0122
THR 3490.0125
GLU 3500.0115
LYS 3510.0095
ASP 3520.0091
GLU 3530.0062
TYR 3540.0062
ALA 3550.0052
CYS 3560.0050
ARG 3570.0051
VAL 3580.0031
ASN 3590.0032
HIS 3600.0033
VAL 3610.0036
THR 3620.0043
LEU 3630.0032
SER 3640.0032
GLN 3650.0030
PRO 3660.0030
LYS 3670.0035
ILE 3680.0048
VAL 3690.0051
LYS 3700.0050
TRP 3710.0055
ASP 3720.0069
ARG 3730.0057
ASP 3740.0026
MET 3750.0040
SER 10.0124
GLN 20.0130
PHE 30.0120
ARG 40.0110
VAL 50.0103
SER 60.0112
PRO 70.0110
LEU 80.0108
ASP 90.0117
ARG 100.0098
THR 110.0120
TRP 120.0124
ASN 130.0146
LEU 140.0184
GLY 150.0206
GLU 160.0191
THR 170.0183
VAL 180.0135
GLU 190.0139
LEU 200.0114
LYS 210.0119
CYS 220.0117
GLN 230.0133
VAL 240.0138
LEU 250.0161
LEU 260.0132
SER 270.0125
ASN 280.0106
PRO 290.0104
THR 300.0086
SER 310.0114
GLY 320.0099
CYS 330.0090
SER 340.0068
TRP 350.0063
LEU 360.0051
PHE 370.0053
GLN 380.0079
PRO 390.0090
ARG 400.0110
GLY 410.0057
ALA 420.0046
ALA 430.0042
ALA 440.0052
SER 450.0053
PRO 460.0062
THR 470.0042
PHE 480.0036
LEU 490.0048
LEU 500.0065
TYR 510.0072
LEU 520.0109
SER 530.0130
GLN 540.0159
ASN 550.0142
LYS 560.0141
PRO 570.0119
LYS 580.0090
ALA 590.0089
ALA 600.0078
GLU 610.0161
GLY 620.0206
LEU 630.0193
ASP 640.0237
THR 650.0221
GLN 660.0285
ARG 670.0245
PHE 680.0183
SER 690.0187
GLY 700.0179
LYS 710.0150
ARG 720.0155
LEU 730.0189
GLY 740.0196
ASP 750.0179
THR 760.0167
PHE 770.0134
VAL 780.0138
LEU 790.0121
THR 800.0152
LEU 810.0180
SER 820.0230
ASP 830.0238
PHE 840.0182
ARG 850.0208
ARG 860.0170
GLU 870.0202
ASN 880.0155
GLU 890.0115
GLY 900.0109
TYR 910.0068
TYR 920.0052
PHE 930.0072
CYS 940.0086
SER 950.0103
ALA 960.0102
LEU 970.0089
SER 980.0089
ASN 990.0080
SER 1000.0081
ILE 1010.0081
MET 1020.0078
TYR 1030.0091
PHE 1040.0096
SER 1050.0108
HIS 1060.0106
PHE 1070.0088
VAL 1080.0073
PRO 1090.0070
VAL 1100.0062
PHE 1110.0124
LEU 1120.0128
PRO 1130.0135
ALA 1140.0160
SER 10.0073
GLN 20.0074
PHE 30.0070
ARG 40.0070
VAL 50.0064
SER 60.0093
PRO 70.0089
LEU 80.0082
ASP 90.0092
ARG 100.0085
THR 110.0093
TRP 120.0088
ASN 130.0099
LEU 140.0094
GLY 150.0087
GLU 160.0076
THR 170.0065
VAL 180.0057
GLU 190.0070
LEU 200.0070
LYS 210.0070
CYS 220.0070
GLN 230.0075
VAL 240.0078
LEU 250.0079
LEU 260.0064
SER 270.0051
ASN 280.0048
PRO 290.0057
THR 300.0059
SER 310.0076
GLY 320.0073
CYS 330.0069
SER 340.0066
TRP 350.0063
LEU 360.0059
PHE 370.0047
GLN 380.0047
PRO 390.0037
ARG 400.0037
GLY 410.0092
ALA 420.0080
ALA 430.0073
ALA 440.0085
SER 450.0084
PRO 460.0076
THR 470.0072
PHE 480.0071
LEU 490.0069
LEU 500.0069
TYR 510.0101
LEU 520.0105
SER 530.0094
GLN 540.0091
ASN 550.0078
LYS 560.0078
PRO 570.0088
LYS 580.0084
ALA 590.0091
ALA 600.0096
GLU 610.0075
GLY 620.0072
LEU 630.0069
ASP 640.0067
THR 650.0070
GLN 660.0056
ARG 670.0042
PHE 680.0050
SER 690.0065
GLY 700.0074
LYS 710.0081
ARG 720.0085
LEU 730.0085
GLY 740.0089
ASP 750.0078
THR 760.0081
PHE 770.0076
VAL 780.0068
LEU 790.0059
THR 800.0056
LEU 810.0041
SER 820.0044
ASP 830.0050
PHE 840.0048
ARG 850.0057
ARG 860.0074
GLU 870.0058
ASN 880.0015
GLU 890.0025
GLY 900.0017
TYR 910.0041
TYR 920.0042
PHE 930.0051
CYS 940.0056
SER 950.0061
ALA 960.0049
LEU 970.0043
SER 980.0032
ASN 990.0044
SER 1000.0053
ILE 1010.0037
MET 1020.0041
TYR 1030.0038
PHE 1040.0046
SER 1050.0048
HIS 1060.0068
PHE 1070.0053
VAL 1080.0049
PRO 1090.0040
VAL 1100.0036
PHE 1110.0054
LEU 1120.0091
PRO 1130.0131
ALA 1140.0138

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.