CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  sec_alpha  ***

<R2> analysis for 2607190209452377176

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0558
MET 10.0189
ASN 20.0082
VAL 30.0038
GLY 40.0145
ALA 50.0071
ARG 60.0102
GLY 70.0138
ASN 80.0166
ALA 90.0148
GLY 100.0125
LEU 110.0131
PHE 120.0152
TRP 130.0123
ARG 140.0100
PHE 150.0101
GLY 160.0106
PHE 170.0073
THR 180.0058
LEU 190.0056
LEU 200.0062
ALA 210.0036
LEU 220.0027
ILE 230.0028
VAL 240.0034
TYR 250.0020
ARG 260.0015
LEU 270.0020
GLY 280.0022
THR 290.0025
TYR 300.0021
ILE 310.0032
PRO 320.0039
ILE 330.0056
PRO 340.0065
GLY 350.0070
VAL 360.0059
ASN 370.0048
PRO 380.0032
SER 390.0019
VAL 400.0036
VAL 410.0041
GLU 420.0034
ASP 430.0043
ILE 440.0058
ILE 450.0057
SER 460.0058
SER 470.0071
HSD 480.0071
ALA 490.0055
THR 500.0040
GLY 510.0038
VAL 520.0045
LEU 530.0043
GLY 540.0041
ILE 550.0039
PHE 560.0040
ASN 570.0032
VAL 580.0029
PHE 590.0027
SER 600.0027
GLY 610.0023
GLY 620.0022
ALA 630.0016
LEU 640.0025
GLY 650.0035
ARG 660.0022
MET 670.0034
THR 680.0032
ILE 690.0033
PHE 700.0031
ALA 710.0034
LEU 720.0040
ASN 730.0013
VAL 740.0014
MET 750.0013
PRO 760.0013
TYR 770.0016
ILE 780.0015
VAL 790.0017
SER 800.0017
SER 810.0040
ILE 820.0041
ILE 830.0044
VAL 840.0045
GLN 850.0070
LEU 860.0073
LEU 870.0080
SER 880.0085
VAL 890.0107
ALA 900.0109
ILE 910.0120
PRO 920.0136
THR 930.0133
LEU 940.0109
ASN 950.0120
GLU 960.0136
MET 970.0106
ARG 980.0101
GLN 990.0119
ASP 1000.0120
GLY 1010.0115
GLU 1020.0091
LEU 1030.0091
GLY 1040.0096
ARG 1050.0073
MET 1060.0061
LYS 1070.0066
MET 1080.0061
SER 1090.0040
THR 1100.0037
TYR 1110.0043
THR 1120.0032
ARG 1130.0012
TYR 1140.0016
LEU 1150.0017
SER 1160.0007
VAL 1170.0018
ALA 1180.0018
PHE 1190.0024
CYS 1200.0029
ILE 1210.0055
ALA 1220.0063
GLN 1230.0060
GLY 1240.0060
LEU 1250.0090
VAL 1260.0094
ILE 1270.0080
LEU 1280.0085
LEU 1290.0105
GLY 1300.0100
LEU 1310.0089
GLU 1320.0103
ARG 1330.0109
MET 1340.0100
ASN 1350.0102
SER 1360.0111
ASP 1370.0122
GLU 1380.0102
VAL 1390.0085
MET 1400.0080
VAL 1410.0065
VAL 1420.0075
ILE 1430.0076
ASN 1440.0091
PRO 1450.0110
GLY 1460.0115
ILE 1470.0113
MET 1480.0105
PHE 1490.0097
ARG 1500.0100
VAL 1510.0102
VAL 1520.0090
GLY 1530.0072
ILE 1540.0077
SER 1550.0076
SER 1560.0064
LEU 1570.0048
LEU 1580.0047
ALA 1590.0042
GLY 1600.0039
THR 1610.0025
MET 1620.0026
PHE 1630.0025
LEU 1640.0024
LEU 1650.0020
TRP 1660.0023
LEU 1670.0026
GLY 1680.0025
GLU 1690.0025
ARG 1700.0034
ILE 1710.0037
ASN 1720.0033
ALA 1730.0045
LYS 1740.0061
GLY 1750.0068
ILE 1760.0073
GLY 1770.0041
ASN 1780.0027
GLY 1790.0025
ILE 1800.0014
SER 1810.0008
LEU 1820.0011
ILE 1830.0014
ILE 1840.0012
PHE 1850.0024
VAL 1860.0021
GLY 1870.0026
ILE 1880.0031
ILE 1890.0045
SER 1900.0037
GLU 1910.0043
LEU 1920.0053
PRO 1930.0088
SER 1940.0074
SER 1950.0073
ILE 1960.0096
SER 1970.0156
SER 1980.0125
VAL 1990.0089
PHE 2000.0129
LEU 2010.0205
LEU 2020.0166
GLY 2030.0120
LYS 2040.0188
ASN 2050.0249
GLY 2060.0200
GLU 2070.0239
VAL 2080.0161
SER 2090.0142
GLY 2100.0086
LEU 2110.0159
VAL 2120.0139
VAL 2130.0074
LEU 2140.0120
SER 2150.0140
MET 2160.0089
LEU 2170.0086
LEU 2180.0110
ALA 2190.0091
PHE 2200.0070
PHE 2210.0049
ALA 2220.0050
LEU 2230.0049
PHE 2240.0046
LEU 2250.0047
LEU 2260.0052
ILE 2270.0051
ILE 2280.0047
PHE 2290.0062
PHE 2300.0066
GLU 2310.0055
ARG 2320.0048
SER 2330.0091
TYR 2340.0094
ARG 2350.0099
LYS 2360.0098
VAL 2370.0100
PHE 2380.0091
VAL 2390.0064
GLN 2400.0087
TYR 2410.0069
PRO 2420.0068
LYS 2430.0063
ARG 2440.0070
GLN 2450.0110
THR 2460.0121
GLY 2470.0179
GLY 2480.0211
ARG 2490.0128
PHE 2500.0152
TYR 2510.0110
ASN 2520.0170
SER 2530.0062
ASP 2540.0058
SER 2550.0063
SER 2560.0072
TYR 2570.0076
ILE 2580.0079
PRO 2590.0092
LEU 2600.0106
LYS 2610.0079
ILE 2620.0085
ASN 2630.0087
THR 2640.0085
ALA 2650.0067
GLY 2660.0058
VAL 2670.0053
ILE 2680.0060
PRO 2690.0059
PRO 2700.0051
ILE 2710.0053
PHE 2720.0059
ALA 2730.0056
ASN 2740.0051
ALA 2750.0058
LEU 2760.0063
LEU 2770.0054
LEU 2780.0053
SER 2790.0039
SER 2800.0037
ILE 2810.0033
SER 2820.0062
LEU 2830.0069
VAL 2840.0051
ARG 2850.0113
PHE 2860.0170
HSD 2870.0173
SER 2880.0159
GLY 2890.0244
SER 2900.0203
GLU 2910.0124
TRP 2920.0128
ALA 2930.0055
ASP 2940.0051
VAL 2950.0081
LEU 2960.0091
LEU 2970.0088
ARG 2980.0159
TYR 2990.0182
LEU 3000.0138
SER 3010.0133
SER 3020.0136
GLU 3030.0115
GLY 3040.0130
ILE 3050.0126
LEU 3060.0129
TYR 3070.0104
VAL 3080.0088
SER 3090.0081
VAL 3100.0090
TYR 3110.0074
ILE 3120.0067
ALA 3130.0076
LEU 3140.0082
ILE 3150.0077
MET 3160.0084
PHE 3170.0093
PHE 3180.0095
THR 3190.0096
PHE 3200.0103
PHE 3210.0086
TYR 3220.0087
THR 3230.0089
SER 3240.0090
LEU 3250.0088
VAL 3260.0088
PHE 3270.0098
ASP 3280.0107
THR 3290.0108
LYS 3300.0098
GLU 3310.0121
THR 3320.0098
SER 3330.0065
GLU 3340.0133
MET 3350.0147
LEU 3360.0088
LYS 3370.0160
LYS 3380.0223
ASN 3390.0174
GLY 3400.0178
GLY 3410.0092
PHE 3420.0102
VAL 3430.0108
PRO 3440.0173
GLY 3450.0276
LYS 3460.0200
ARG 3470.0215
PRO 3480.0172
GLY 3490.0134
LYS 3500.0099
ALA 3510.0102
THR 3520.0065
LYS 3530.0060
GLU 3540.0070
TYR 3550.0091
PHE 3560.0101
ASP 3570.0125
GLN 3580.0131
VAL 3590.0126
ILE 3600.0136
GLY 3610.0143
ARG 3620.0136
ILE 3630.0123
THR 3640.0126
VAL 3650.0127
LEU 3660.0111
GLY 3670.0106
ALA 3680.0110
ILE 3690.0085
TYR 3700.0072
LEU 3710.0074
SER 3720.0075
VAL 3730.0052
VAL 3740.0048
CYS 3750.0056
VAL 3760.0051
VAL 3770.0034
PRO 3780.0041
GLU 3790.0049
ILE 3800.0039
VAL 3810.0054
ARG 3820.0061
HSD 3830.0066
TYR 3840.0072
CYS 3850.0104
ALA 3860.0114
VAL 3870.0089
SER 3880.0092
PHE 3890.0051
THR 3900.0055
LEU 3910.0054
GLY 3920.0051
GLY 3930.0042
THR 3940.0043
SER 3950.0043
PHE 3960.0042
LEU 3970.0040
ILE 3980.0040
ILE 3990.0036
VAL 4000.0034
ASN 4010.0029
VAL 4020.0024
ILE 4030.0018
ASN 4040.0017
ASP 4050.0021
THR 4060.0029
PHE 4070.0042
SER 4080.0050
GLN 4090.0083
VAL 4100.0100
GLN 4110.0112
THR 4120.0106
GLN 4130.0114
VAL 4140.0128
TYR 4150.0124
SER 4160.0105
GLY 4170.0104
ARG 4180.0098
TYR 4190.0110
SER 4200.0100
ALA 4210.0077
LEU 4220.0104
MET 4230.0118
LYS 4240.0094
LYS 4250.0113
SER 4260.0111
GLU 4270.0099
LEU 4280.0100
TRP 4290.0091
LYS 4300.0059
LYS 4310.0064
VAL 4320.0086
LYS 4330.0089
MET 4340.0170
PHE 4350.0138
LEU 4360.0151
ALA 4370.0099
MET 4380.0065
ILE 4390.0041
GLY 4400.0071
SER 4410.0122
PHE 4420.0137
ALA 4430.0158
ARG 4440.0192
PHE 4450.0186
LEU 4460.0183
CYS 4470.0183
ASP 4480.0182
VAL 4490.0160
LYS 4500.0158
GLN 4510.0147
GLU 4520.0134
ALA 4530.0131
LEU 4540.0127
GLN 4550.0108
VAL 4560.0100
SER 4570.0086
TRP 4580.0083
ALA 4590.0074
SER 4600.0083
ARG 4610.0113
LYS 4620.0105
GLU 4630.0068
VAL 4640.0061
SER 4650.0049
VAL 4660.0033
PHE 4670.0026
LEU 4680.0037
LEU 4690.0025
ILE 4700.0019
VAL 4710.0028
LEU 4720.0033
LEU 4730.0027
THR 4740.0029
VAL 4750.0032
VAL 4760.0030
VAL 4770.0036
SER 4780.0035
SER 4790.0038
ILE 4800.0035
LEU 4810.0017
PHE 4820.0016
SER 4830.0026
CYS 4840.0024
VAL 4850.0021
ASP 4860.0021
PHE 4870.0030
VAL 4880.0032
PHE 4890.0023
LEU 4900.0021
ARG 4910.0030
LEU 4920.0035
VAL 4930.0029
LYS 4940.0027
ILE 4950.0039
ALA 4960.0046
LEU 4970.0044
GLY 4980.0037
VAL 4990.0032
VAL 5000.0025
TYR 5010.0033
ALA 5020.0028
ALA 5030.0064
MET 5040.0558
SER 5050.0405
PHE 5060.0255
VAL 5070.0187
SER 5080.0210
CYS 5090.0143
LEU 5100.0073
MET 5110.0034
PHE 5120.0108
LEU 5130.0105
THR 5140.0094
ALA 5150.0111
ALA 5160.0133
GLN 5170.0092
VAL 5180.0101
PHE 5190.0103
LEU 5200.0088
ALA 5210.0069
PHE 5220.0074
LEU 5230.0062
LEU 5240.0049
VAL 5250.0039
LEU 5260.0040
LEU 5270.0031
VAL 5280.0029
LEU 5290.0017
LEU 5300.0012
GLN 5310.0014
SER 5320.0016
PRO 5330.0022
GLU 5340.0025
SER 5350.0035
ASP 5360.0046
THR 5370.0039
LEU 5380.0047
GLY 5390.0045
GLY 5400.0039
PHE 5410.0036
GLY 5420.0037
GLY 5430.0047
PRO 5440.0051
GLN 5450.0052
CYS 5460.0062
ASN 5470.0065
LEU 5480.0064
GLY 5490.0049
SER 5500.0076
MET 5510.0088
PHE 5520.0066
GLY 5530.0058
LYS 5540.0041
SER 5550.0049
SER 5560.0045
SER 5570.0036
SER 5580.0034
SER 5590.0038
PHE 5600.0037
ILE 5610.0032
ALA 5620.0030
LYS 5630.0029
LEU 5640.0033
THR 5650.0033
ALA 5660.0027
VAL 5670.0037
VAL 5680.0045
ALA 5690.0045
ALA 5700.0044
ALA 5710.0061
PHE 5720.0059
ILE 5730.0054
VAL 5740.0061
ASN 5750.0076
THR 5760.0068
ILE 5770.0061
LEU 5780.0070
LEU 5790.0074
VAL 5800.0064
GLY 5810.0083
THR 5820.0073
ASN 5830.0063
ALA 5840.0067
ARG 5850.0069
ARG 5860.0059
VAL 5870.0079
ARG 5880.0087
GLU 5890.0086
VAL 5900.0062
SER 5910.0120
VAL 5920.0124
VAL 5930.0051
SER 5940.0060
LYS 5950.0097
THR 5960.0099
GLU 5970.0097
ALA 5980.0070
VAL 5990.0066
SER 6000.0145
GLY 6010.0116
GLN 6020.0118
GLU 6030.0113
SER 6040.0100
ASN 6050.0035
GLY 6060.0122
SER 6070.0183
GLU 6080.0163
VAL 6090.0141
PRO 6100.0118
PHE 6110.0049
GLU 6120.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.