CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  sec_alpha  ***

<R2> analysis for 2607190209452377176

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0849
MET 10.0056
ASN 20.0042
VAL 30.0023
GLY 40.0016
ALA 50.0016
ARG 60.0028
GLY 70.0045
ASN 80.0026
ALA 90.0019
GLY 100.0028
LEU 110.0012
PHE 120.0012
TRP 130.0035
ARG 140.0031
PHE 150.0032
GLY 160.0047
PHE 170.0045
THR 180.0046
LEU 190.0048
LEU 200.0051
ALA 210.0038
LEU 220.0038
ILE 230.0038
VAL 240.0039
TYR 250.0026
ARG 260.0026
LEU 270.0030
GLY 280.0032
THR 290.0023
TYR 300.0028
ILE 310.0030
PRO 320.0035
ILE 330.0027
PRO 340.0027
GLY 350.0031
VAL 360.0032
ASN 370.0056
PRO 380.0052
SER 390.0053
VAL 400.0053
VAL 410.0060
GLU 420.0062
ASP 430.0067
ILE 440.0059
ILE 450.0062
SER 460.0074
SER 470.0080
HSD 480.0065
ALA 490.0069
THR 500.0072
GLY 510.0059
VAL 520.0042
LEU 530.0049
GLY 540.0059
ILE 550.0054
PHE 560.0045
ASN 570.0041
VAL 580.0042
PHE 590.0039
SER 600.0038
GLY 610.0035
GLY 620.0040
ALA 630.0033
LEU 640.0039
GLY 650.0042
ARG 660.0041
MET 670.0042
THR 680.0035
ILE 690.0022
PHE 700.0023
ALA 710.0034
LEU 720.0035
ASN 730.0029
VAL 740.0029
MET 750.0033
PRO 760.0029
TYR 770.0031
ILE 780.0031
VAL 790.0030
SER 800.0028
SER 810.0028
ILE 820.0025
ILE 830.0027
VAL 840.0026
GLN 850.0030
LEU 860.0034
LEU 870.0033
SER 880.0030
VAL 890.0050
ALA 900.0055
ILE 910.0050
PRO 920.0052
THR 930.0053
LEU 940.0041
ASN 950.0053
GLU 960.0052
MET 970.0034
ARG 980.0037
GLN 990.0040
ASP 1000.0033
GLY 1010.0043
GLU 1020.0042
LEU 1030.0025
GLY 1040.0019
ARG 1050.0021
MET 1060.0015
LYS 1070.0015
MET 1080.0022
SER 1090.0021
THR 1100.0018
TYR 1110.0023
THR 1120.0028
ARG 1130.0027
TYR 1140.0025
LEU 1150.0030
SER 1160.0034
VAL 1170.0029
ALA 1180.0031
PHE 1190.0035
CYS 1200.0038
ILE 1210.0045
ALA 1220.0048
GLN 1230.0052
GLY 1240.0054
LEU 1250.0062
VAL 1260.0065
ILE 1270.0063
LEU 1280.0062
LEU 1290.0064
GLY 1300.0062
LEU 1310.0057
GLU 1320.0050
ARG 1330.0031
MET 1340.0040
ASN 1350.0032
SER 1360.0024
ASP 1370.0073
GLU 1380.0083
VAL 1390.0058
MET 1400.0049
VAL 1410.0046
VAL 1420.0044
ILE 1430.0037
ASN 1440.0038
PRO 1450.0056
GLY 1460.0063
ILE 1470.0072
MET 1480.0066
PHE 1490.0051
ARG 1500.0060
VAL 1510.0056
VAL 1520.0049
GLY 1530.0048
ILE 1540.0048
SER 1550.0035
SER 1560.0035
LEU 1570.0036
LEU 1580.0029
ALA 1590.0025
GLY 1600.0031
THR 1610.0031
MET 1620.0026
PHE 1630.0027
LEU 1640.0035
LEU 1650.0036
TRP 1660.0035
LEU 1670.0039
GLY 1680.0042
GLU 1690.0039
ARG 1700.0036
ILE 1710.0036
ASN 1720.0043
ALA 1730.0045
LYS 1740.0036
GLY 1750.0026
ILE 1760.0024
GLY 1770.0026
ASN 1780.0027
GLY 1790.0029
ILE 1800.0029
SER 1810.0030
LEU 1820.0029
ILE 1830.0029
ILE 1840.0030
PHE 1850.0043
VAL 1860.0044
GLY 1870.0038
ILE 1880.0037
ILE 1890.0036
SER 1900.0043
GLU 1910.0031
LEU 1920.0026
PRO 1930.0037
SER 1940.0053
SER 1950.0044
ILE 1960.0056
SER 1970.0082
SER 1980.0092
VAL 1990.0087
PHE 2000.0068
LEU 2010.0131
LEU 2020.0093
GLY 2030.0074
LYS 2040.0145
ASN 2050.0190
GLY 2060.0124
GLU 2070.0093
VAL 2080.0086
SER 2090.0077
GLY 2100.0117
LEU 2110.0089
VAL 2120.0063
VAL 2130.0098
LEU 2140.0133
SER 2150.0106
MET 2160.0076
LEU 2170.0089
LEU 2180.0106
ALA 2190.0072
PHE 2200.0038
PHE 2210.0026
ALA 2220.0043
LEU 2230.0036
PHE 2240.0030
LEU 2250.0042
LEU 2260.0052
ILE 2270.0057
ILE 2280.0056
PHE 2290.0058
PHE 2300.0059
GLU 2310.0055
ARG 2320.0048
SER 2330.0030
TYR 2340.0032
ARG 2350.0059
LYS 2360.0093
VAL 2370.0041
PHE 2380.0030
VAL 2390.0011
GLN 2400.0029
TYR 2410.0054
PRO 2420.0064
LYS 2430.0044
ARG 2440.0050
GLN 2450.0036
THR 2460.0053
GLY 2470.0051
GLY 2480.0044
ARG 2490.0018
PHE 2500.0015
TYR 2510.0046
ASN 2520.0071
SER 2530.0073
ASP 2540.0043
SER 2550.0031
SER 2560.0016
TYR 2570.0068
ILE 2580.0055
PRO 2590.0069
LEU 2600.0049
LYS 2610.0019
ILE 2620.0028
ASN 2630.0025
THR 2640.0016
ALA 2650.0020
GLY 2660.0027
VAL 2670.0033
ILE 2680.0025
PRO 2690.0030
PRO 2700.0039
ILE 2710.0033
PHE 2720.0025
ALA 2730.0051
ASN 2740.0050
ALA 2750.0032
LEU 2760.0032
LEU 2770.0057
LEU 2780.0026
SER 2790.0022
SER 2800.0045
ILE 2810.0047
SER 2820.0066
LEU 2830.0092
VAL 2840.0078
ARG 2850.0067
PHE 2860.0095
HSD 2870.0070
SER 2880.0059
GLY 2890.0186
SER 2900.0141
GLU 2910.0146
TRP 2920.0110
ALA 2930.0029
ASP 2940.0058
VAL 2950.0076
LEU 2960.0089
LEU 2970.0079
ARG 2980.0116
TYR 2990.0103
LEU 3000.0063
SER 3010.0051
SER 3020.0030
GLU 3030.0063
GLY 3040.0065
ILE 3050.0123
LEU 3060.0106
TYR 3070.0076
VAL 3080.0117
SER 3090.0121
VAL 3100.0097
TYR 3110.0082
ILE 3120.0103
ALA 3130.0088
LEU 3140.0065
ILE 3150.0053
MET 3160.0059
PHE 3170.0051
PHE 3180.0029
THR 3190.0020
PHE 3200.0036
PHE 3210.0014
TYR 3220.0012
THR 3230.0015
SER 3240.0019
LEU 3250.0021
VAL 3260.0010
PHE 3270.0007
ASP 3280.0018
THR 3290.0049
LYS 3300.0047
GLU 3310.0049
THR 3320.0049
SER 3330.0049
GLU 3340.0061
MET 3350.0085
LEU 3360.0054
LYS 3370.0063
LYS 3380.0116
ASN 3390.0101
GLY 3400.0049
GLY 3410.0032
PHE 3420.0034
VAL 3430.0030
PRO 3440.0039
GLY 3450.0023
LYS 3460.0029
ARG 3470.0034
PRO 3480.0037
GLY 3490.0051
LYS 3500.0053
ALA 3510.0041
THR 3520.0036
LYS 3530.0036
GLU 3540.0033
TYR 3550.0018
PHE 3560.0016
ASP 3570.0017
GLN 3580.0005
VAL 3590.0025
ILE 3600.0022
GLY 3610.0039
ARG 3620.0041
ILE 3630.0046
THR 3640.0045
VAL 3650.0062
LEU 3660.0048
GLY 3670.0027
ALA 3680.0030
ILE 3690.0060
TYR 3700.0050
LEU 3710.0045
SER 3720.0066
VAL 3730.0076
VAL 3740.0070
CYS 3750.0071
VAL 3760.0091
VAL 3770.0074
PRO 3780.0074
GLU 3790.0078
ILE 3800.0084
VAL 3810.0047
ARG 3820.0052
HSD 3830.0070
TYR 3840.0066
CYS 3850.0020
ALA 3860.0046
VAL 3870.0035
SER 3880.0022
PHE 3890.0019
THR 3900.0029
LEU 3910.0027
GLY 3920.0042
GLY 3930.0042
THR 3940.0049
SER 3950.0046
PHE 3960.0042
LEU 3970.0043
ILE 3980.0048
ILE 3990.0046
VAL 4000.0049
ASN 4010.0052
VAL 4020.0057
ILE 4030.0056
ASN 4040.0059
ASP 4050.0033
THR 4060.0036
PHE 4070.0041
SER 4080.0043
GLN 4090.0021
VAL 4100.0023
GLN 4110.0021
THR 4120.0016
GLN 4130.0019
VAL 4140.0013
TYR 4150.0014
SER 4160.0013
GLY 4170.0011
ARG 4180.0018
TYR 4190.0018
SER 4200.0012
ALA 4210.0024
LEU 4220.0024
MET 4230.0015
LYS 4240.0027
LYS 4250.0039
SER 4260.0016
GLU 4270.0027
LEU 4280.0040
TRP 4290.0027
LYS 4300.0023
LYS 4310.0028
VAL 4320.0028
LYS 4330.0060
MET 4340.0073
PHE 4350.0122
LEU 4360.0176
ALA 4370.0126
MET 4380.0091
ILE 4390.0044
GLY 4400.0145
SER 4410.0171
PHE 4420.0214
ALA 4430.0287
ARG 4440.0230
PHE 4450.0120
LEU 4460.0158
CYS 4470.0138
ASP 4480.0076
VAL 4490.0079
LYS 4500.0108
GLN 4510.0123
GLU 4520.0110
ALA 4530.0123
LEU 4540.0172
GLN 4550.0154
VAL 4560.0109
SER 4570.0085
TRP 4580.0061
ALA 4590.0051
SER 4600.0062
ARG 4610.0091
LYS 4620.0055
GLU 4630.0036
VAL 4640.0057
SER 4650.0026
VAL 4660.0019
PHE 4670.0040
LEU 4680.0024
LEU 4690.0030
ILE 4700.0062
VAL 4710.0056
LEU 4720.0055
LEU 4730.0132
THR 4740.0123
VAL 4750.0080
VAL 4760.0130
VAL 4770.0168
SER 4780.0123
SER 4790.0085
ILE 4800.0140
LEU 4810.0090
PHE 4820.0067
SER 4830.0062
CYS 4840.0080
VAL 4850.0070
ASP 4860.0045
PHE 4870.0060
VAL 4880.0092
PHE 4890.0074
LEU 4900.0063
ARG 4910.0093
LEU 4920.0117
VAL 4930.0089
LYS 4940.0096
ILE 4950.0117
ALA 4960.0120
LEU 4970.0089
GLY 4980.0093
VAL 4990.0080
VAL 5000.0072
TYR 5010.0047
ALA 5020.0058
ALA 5030.0073
MET 5040.0214
SER 5050.0089
PHE 5060.0057
VAL 5070.0077
SER 5080.0117
CYS 5090.0068
LEU 5100.0064
MET 5110.0109
PHE 5120.0113
LEU 5130.0040
THR 5140.0045
ALA 5150.0062
ALA 5160.0054
GLN 5170.0021
VAL 5180.0020
PHE 5190.0016
LEU 5200.0018
ALA 5210.0026
PHE 5220.0019
LEU 5230.0014
LEU 5240.0024
VAL 5250.0030
LEU 5260.0022
LEU 5270.0029
VAL 5280.0034
LEU 5290.0033
LEU 5300.0029
GLN 5310.0036
SER 5320.0033
PRO 5330.0021
GLU 5340.0023
SER 5350.0026
ASP 5360.0026
THR 5370.0022
LEU 5380.0018
GLY 5390.0017
GLY 5400.0017
PHE 5410.0019
GLY 5420.0027
GLY 5430.0025
PRO 5440.0036
GLN 5450.0079
CYS 5460.0090
ASN 5470.0086
LEU 5480.0093
GLY 5490.0207
SER 5500.0195
MET 5510.0188
PHE 5520.0231
GLY 5530.0194
LYS 5540.0093
SER 5550.0110
SER 5560.0091
SER 5570.0141
SER 5580.0102
SER 5590.0075
PHE 5600.0072
ILE 5610.0055
ALA 5620.0071
LYS 5630.0091
LEU 5640.0079
THR 5650.0051
ALA 5660.0072
VAL 5670.0068
VAL 5680.0044
ALA 5690.0034
ALA 5700.0035
ALA 5710.0021
PHE 5720.0023
ILE 5730.0008
VAL 5740.0010
ASN 5750.0009
THR 5760.0009
ILE 5770.0025
LEU 5780.0014
LEU 5790.0015
VAL 5800.0029
GLY 5810.0042
THR 5820.0047
ASN 5830.0051
ALA 5840.0062
ARG 5850.0102
ARG 5860.0088
VAL 5870.0098
ARG 5880.0135
GLU 5890.0185
VAL 5900.0110
SER 5910.0178
VAL 5920.0205
VAL 5930.0099
SER 5940.0122
LYS 5950.0131
THR 5960.0104
GLU 5970.0139
ALA 5980.0234
VAL 5990.0319
SER 6000.0211
GLY 6010.0268
GLN 6020.0296
GLU 6030.0054
SER 6040.0405
ASN 6050.0304
GLY 6060.0849
SER 6070.0692
GLU 6080.0345
VAL 6090.0503
PRO 6100.0356
PHE 6110.0253
GLU 6120.0416

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.