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This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LEU 1
SER 2
0.1688
SER 2
ASP 3
-0.0803
ASP 3
GLU 4
0.2834
GLU 4
ASP 5
-0.0435
ASP 5
PHE 6
0.0860
PHE 6
LYS 7
0.0967
LYS 7
ALA 8
0.1222
ALA 8
VAL 9
-0.2580
VAL 9
PHE 10
-0.2470
PHE 10
GLY 11
0.2416
GLY 11
MET 12
-0.2055
MET 12
THR 13
0.1998
THR 13
ARG 14
-0.1426
ARG 14
SER 15
0.4625
SER 15
ALA 16
0.0724
ALA 16
PHE 17
0.2144
PHE 17
ALA 18
-0.1017
ALA 18
ASN 19
0.1224
ASN 19
LEU 20
-0.1285
LEU 20
PRO 21
-0.1708
PRO 21
LEU 22
0.1722
LEU 22
TRP 23
-0.2333
TRP 23
LYS 24
-0.0157
LYS 24
GLN 25
0.1763
GLN 25
GLN 26
-0.1578
GLN 26
ASN 27
-0.1615
ASN 27
LEU 28
0.2942
LEU 28
LYS 29
-0.3048
LYS 29
LYS 30
0.0650
LYS 30
GLU 31
0.0333
GLU 31
LYS 32
0.0419
LYS 32
GLY 33
-0.3401
GLY 33
LEU 34
0.2335
LEU 34
PHE 35
-0.0253
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.