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This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LEU 1
SER 2
0.4347
SER 2
ASP 3
-0.0916
ASP 3
GLU 4
-0.6448
GLU 4
ASP 5
0.0334
ASP 5
PHE 6
-0.2298
PHE 6
LYS 7
0.1100
LYS 7
ALA 8
-0.0556
ALA 8
VAL 9
-0.3007
VAL 9
PHE 10
0.1730
PHE 10
GLY 11
-0.5124
GLY 11
MET 12
0.3118
MET 12
THR 13
-0.4155
THR 13
ARG 14
0.2612
ARG 14
SER 15
-0.5229
SER 15
ALA 16
-0.1870
ALA 16
PHE 17
0.4508
PHE 17
ALA 18
0.0646
ALA 18
ASN 19
-0.2084
ASN 19
LEU 20
0.1281
LEU 20
PRO 21
-0.2558
PRO 21
LEU 22
0.0173
LEU 22
TRP 23
-0.2200
TRP 23
LYS 24
-0.0931
LYS 24
GLN 25
0.0199
GLN 25
GLN 26
-0.3446
GLN 26
ASN 27
-0.2261
ASN 27
LEU 28
0.2031
LEU 28
LYS 29
-0.1510
LYS 29
LYS 30
-0.2145
LYS 30
GLU 31
0.1703
GLU 31
LYS 32
0.0615
LYS 32
GLY 33
-0.1915
GLY 33
LEU 34
0.2068
LEU 34
PHE 35
-0.1915
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.