CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  CYTOKINE 2024-10-21  ***

B-factor analysis for ID 2608031212472344273

Overall B-factor prediction

Correlation= 0.478 for 215 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   PRO     42      0.0214     54.6645     61.7100
    17 CA   ARG     43      0.0164     54.3838     58.5900
    41 CA   THR     44      0.0095     53.9929     48.8100
    55 CA   VAL     45      0.0069     53.8458     41.6400
    71 CA   MET     46      0.0059     53.7898     39.2500
    88 CA   VAL     47      0.0042     53.6966     38.1500
   104 CA   ASN     48      0.0064     53.8224     41.9600
   118 CA   LEU     49      0.0063     53.8145     44.4700
   137 CA   ASN     50      0.0107     54.0649     45.4000
   151 CA   ILE     51      0.0087     53.9508     43.8900
   170 CA   HIS     52      0.0124     54.1564     47.4500
   187 CA   ASN     53      0.0138     54.2374     49.5400
   201 CA   ARG     54      0.0144     54.2694     57.4500
   225 CA   ASN     55      0.0246     54.8446     66.5400
   239 CA   THR     56      0.0184     54.4978     71.8100
   253 CA   TYR     66      0.0076     53.8878     73.2900
   274 CA   TYR     67      0.0081     53.9158     72.8800
   295 CA   ASN     68      0.0112     54.0914     68.7400
   309 CA   ARG     69      0.0090     53.9657     62.1800
   333 CA   SER     70      0.0055     53.7680     52.8500
   344 CA   THR     71      0.0051     53.7497     49.2900
   358 CA   SER     72      0.0049     53.7372     46.2400
   369 CA   PRO     73      0.0066     53.8341     46.8400
   383 CA   TRP     74      0.0076     53.8874     47.4300
   407 CA   ASN     75      0.0106     54.0591     50.8400
   421 CA   LEU     76      0.0118     54.1224     52.2600
   440 CA   HIS     77      0.0146     54.2806     55.1600
   457 CA   ARG     78      0.0169     54.4109     52.8300
   481 CA   ASN     79      0.0133     54.2086     55.0300
   495 CA   GLU     80      0.0156     54.3368     55.2500
   510 CA   ASP     81      0.0139     54.2408     54.4600
   522 CA   PRO     82      0.0176     54.4525     55.2400
   536 CA   GLU     83      0.0120     54.1374     52.4000
   551 CA   ARG     84      0.0069     53.8498     49.0500
   575 CA   PRO     86      0.0058     53.7852     46.4200
   589 CA   SER     87      0.0088     53.9569     50.6800
   600 CA   VAL     88      0.0116     54.1155     50.2600
   616 CA   ILE     89      0.0086     53.9444     49.6200
   635 CA   TRP     90      0.0105     54.0533     53.0300
   659 CA   GLU     91      0.0090     53.9645     54.2500
   674 CA   ALA     92      0.0078     53.8972     51.4600
   684 CA   LYS     93      0.0108     54.0693     51.6500
   706 CA   CYS     94      0.0084     53.9309     50.8600
   716 CA   ARG     95      0.0109     54.0740     51.3100
   740 CA   HIS     96      0.0135     54.2218     49.7800
   757 CA   LEU     97      0.0163     54.3766     48.0400
   776 CA   GLY     98      0.0108     54.0683     48.6600
   783 CA   CYS     99      0.0077     53.8923     51.6300
   793 CA   ILE    100      0.0104     54.0481     60.2400
   812 CA   ASN    101      0.0151     54.3093     69.8400
   826 CA   ALA    102      0.0380     55.5956     77.0500
   836 CA   GLY    104      0.0355     55.4566     76.4000
   843 CA   ASN    105      0.0304     55.1700     72.8700
   857 CA   VAL    106      0.0158     54.3464     67.0600
   873 CA   ASP    107      0.0154     54.3279     60.2600
   885 CA   TYR    108      0.0214     54.6650     59.4300
   906 CA   HIS    109      0.0236     54.7901     56.2600
   923 CA   MET    110      0.0092     53.9795     52.0500
   940 CA   ASN    111      0.0084     53.9310     46.9600
   954 CA   SER    112      0.0058     53.7884     44.8500
   965 CA   VAL    113      0.0063     53.8124     45.3100
   981 CA   PRO    114      0.0055     53.7689     47.1700
   995 CA   ILE    115      0.0049     53.7337     48.7000
  1014 CA   GLN    116      0.0060     53.7964     53.7200
  1031 CA   GLN    117      0.0058     53.7884     55.5200
  1048 CA   GLU    118      0.0085     53.9361     53.4500
  1063 CA   ILE    119      0.0050     53.7395     49.3900
  1082 CA   LEU    120      0.0039     53.6791     46.9700
  1101 CA   VAL    121      0.0036     53.6626     43.6400
  1117 CA   LEU    122      0.0035     53.6554     47.1600
  1136 CA   ARG    123      0.0060     53.7964     49.3100
  1160 CA   ARG    124      0.0085     53.9363     51.2600
  1184 CA   GLU    125      0.0115     54.1056     57.2500
  1199 CA   PRO    126      0.0224     54.7232     60.7600
  1213 CA   PRO    127      0.0230     54.7555     60.8400
  1227 CA   HIS    128      0.0218     54.6892     60.6100
  1244 CA   SER    129      0.0153     54.3219     57.4900
  1255 CA   PRO    130      0.0135     54.2225     53.7400
  1269 CA   ASN    131      0.0098     54.0093     44.6400
  1283 CA   SER    132      0.0077     53.8931     45.3700
  1294 CA   PHE    133      0.0057     53.7830     44.2500
  1314 CA   ARG    134      0.0060     53.8003     48.1400
  1338 CA   LEU    135      0.0048     53.7309     51.3200
  1357 CA   GLU    136      0.0065     53.8233     51.5400
  1372 CA   LYS    137      0.0073     53.8687     53.2900
  1394 CA   ILE    138      0.0072     53.8629     50.6300
  1413 CA   LEU    139      0.0081     53.9183     52.2100
  1432 CA   VAL    140      0.0057     53.7791     49.4300
  1448 CA   SER    141      0.0059     53.7924     46.2100
  1459 CA   VAL    142      0.0048     53.7329     46.6300
  1475 CA   GLY    143      0.0049     53.7348     47.7600
  1482 CA   CYS    144      0.0043     53.7045     46.6600
  1492 CA   THR    145      0.0036     53.6624     45.3000
  1506 CA   CYS    146      0.0042     53.6977     46.1800
  1516 CA   VAL    147      0.0055     53.7718     45.4900
  1532 CA   THR    148      0.0095     53.9960     52.6200
  1546 CA   PRO    149      0.0140     54.2458     54.0200
  1560 CA   ILE    150      0.0288     55.0820     56.2900
  1579 CA   VAL    151      0.0619     56.9426     57.0100
  1595 CA   HIS    152      0.1978     64.5885     60.1000
  1612 CA   HIS    153      0.4599     79.3284     64.0400
  1629 CA   VAL    154      0.8534    101.4654     67.9300
  1645 CA   ALA    155      1.4253    133.6316     71.7400
  1656 CA   ASP    103      0.0605     56.8645     78.6800
  1668 CA   ASN     57      0.0635     57.0332     75.8500
  1683 CA   SER     64      0.0189     54.5220     78.2200
  1695 CA   ASP     65      0.0143     54.2638     76.4800
  1707 CA   TYR     85      0.0047     53.7275     47.6000
  1728 CA   PHE     41      0.0241     54.8158     73.9200
  1748 CA   PRO     42      0.0181     54.4768     62.7500
  1762 CA   ARG     43      0.0138     54.2351     53.7600
  1786 CA   THR     44      0.0091     53.9744     48.5500
  1800 CA   VAL     45      0.0061     53.8044     43.8000
  1816 CA   MET     46      0.0059     53.7923     42.2700
  1833 CA   VAL     47      0.0043     53.7046     43.3400
  1849 CA   ASN     48      0.0070     53.8528     47.3800
  1863 CA   LEU     49      0.0070     53.8526     50.1800
  1882 CA   ASN     50      0.0122     54.1491     55.2300
  1896 CA   ILE     51      0.0100     54.0231     59.5600
  1915 CA   HIS     52      0.0134     54.2117     63.4300
  1932 CA   ASN     53      0.0165     54.3909     68.8500
  1946 CA   ARG     54      0.0190     54.5280     74.0500
  1971 CA   SER     64      0.0290     55.0942     77.6400
  1983 CA   TYR     66      0.0069     53.8510     64.5500
  2004 CA   TYR     67      0.0074     53.8775     63.4900
  2025 CA   ASN     68      0.0103     54.0412     59.8700
  2039 CA   ARG     69      0.0082     53.9192     53.7900
  2063 CA   SER     70      0.0049     53.7350     48.9600
  2074 CA   THR     71      0.0048     53.7281     46.8200
  2088 CA   SER     72      0.0047     53.7221     45.2400
  2099 CA   PRO     73      0.0061     53.8034     46.0500
  2113 CA   TRP     74      0.0071     53.8605     46.8200
  2137 CA   ASN     75      0.0101     54.0301     53.3900
  2151 CA   LEU     76      0.0112     54.0928     57.1000
  2170 CA   HIS     77      0.0138     54.2358     61.7400
  2187 CA   ARG     78      0.0164     54.3830     61.8700
  2211 CA   ASN     79      0.0132     54.2011     63.2300
  2225 CA   GLU     80      0.0156     54.3398     64.4100
  2240 CA   ASP     81      0.0141     54.2522     60.3500
  2252 CA   PRO     82      0.0183     54.4917     58.6400
  2266 CA   GLU     83      0.0125     54.1656     53.8700
  2281 CA   ARG     84      0.0066     53.8320     50.7500
  2305 CA   TYR     85      0.0048     53.7313     51.0600
  2326 CA   PRO     86      0.0059     53.7948     49.5200
  2340 CA   SER     87      0.0091     53.9711     54.3600
  2351 CA   VAL     88      0.0116     54.1128     56.7800
  2367 CA   ILE     89      0.0086     53.9437     54.5400
  2386 CA   TRP     90      0.0105     54.0516     56.2700
  2410 CA   GLU     91      0.0088     53.9546     56.1500
  2425 CA   ALA     92      0.0075     53.8836     52.3400
  2435 CA   LYS     93      0.0098     54.0140     52.1900
  2457 CA   CYS     94      0.0079     53.9062     50.8500
  2467 CA   ARG     95      0.0103     54.0417     51.3700
  2491 CA   HIS     96      0.0128     54.1777     52.1400
  2508 CA   LEU     97      0.0154     54.3292     51.7200
  2527 CA   GLY     98      0.0109     54.0745     50.5800
  2534 CA   CYS     99      0.0076     53.8899     53.3500
  2544 CA   ILE    100      0.0100     54.0239     60.8200
  2563 CA   ASN    101      0.0147     54.2877     68.6500
  2577 CA   ALA    102      0.0414     55.7897     74.3300
  2587 CA   ASP    103      0.0514     56.3509     79.0600
  2599 CA   GLY    104      0.0345     55.4026     76.0300
  2606 CA   ASN    105      0.0296     55.1238     71.9500
  2620 CA   VAL    106      0.0154     54.3276     68.3400
  2636 CA   ASP    107      0.0156     54.3406     66.2000
  2648 CA   TYR    108      0.0214     54.6658     64.5400
  2669 CA   HIS    109      0.0244     54.8327     62.6200
  2686 CA   MET    110      0.0099     54.0163     58.9900
  2703 CA   ASN    111      0.0089     53.9630     53.8200
  2717 CA   SER    112      0.0061     53.8031     51.6000
  2728 CA   VAL    113      0.0066     53.8318     51.1700
  2744 CA   PRO    114      0.0057     53.7784     51.4300
  2758 CA   ILE    115      0.0051     53.7454     51.7100
  2777 CA   GLN    116      0.0059     53.7931     55.7700
  2794 CA   GLN    117      0.0054     53.7634     54.2100
  2811 CA   GLU    118      0.0072     53.8653     54.2600
  2826 CA   ILE    119      0.0047     53.7250     51.0000
  2845 CA   LEU    120      0.0035     53.6578     47.9500
  2864 CA   VAL    121      0.0034     53.6514     45.0200
  2880 CA   LEU    122      0.0036     53.6608     45.8900
  2899 CA   ARG    123      0.0061     53.8042     46.4400
  2923 CA   ARG    124      0.0090     53.9647     49.4300
  2947 CA   GLU    125      0.0118     54.1220     53.9700
  2962 CA   PRO    126      0.0233     54.7722     55.8600
  2976 CA   PRO    127      0.0238     54.7979     58.0400
  2990 CA   HIS    128      0.0235     54.7819     58.5900
  3007 CA   SER    129      0.0168     54.4053     55.1800
  3018 CA   PRO    130      0.0160     54.3620     52.3000
  3032 CA   ASN    131      0.0110     54.0776     47.1300
  3046 CA   SER    132      0.0083     53.9250     45.0900
  3057 CA   PHE    133      0.0060     53.7966     43.5900
  3077 CA   ARG    134      0.0058     53.7862     45.8900
  3101 CA   LEU    135      0.0044     53.7053     46.0000
  3120 CA   GLU    136      0.0060     53.7972     47.7600
  3135 CA   LYS    137      0.0066     53.8302     47.6800
  3157 CA   ILE    138      0.0067     53.8357     47.4100
  3176 CA   LEU    139      0.0079     53.9039     52.6100
  3195 CA   VAL    140      0.0057     53.7795     52.6700
  3211 CA   SER    141      0.0059     53.7946     49.2300
  3222 CA   VAL    142      0.0048     53.7316     49.3100
  3238 CA   GLY    143      0.0047     53.7266     49.2000
  3245 CA   CYS    144      0.0043     53.7006     46.2000
  3255 CA   THR    145      0.0037     53.6670     45.3200
  3269 CA   CYS    146      0.0045     53.7123     49.2300
  3279 CA   VAL    147      0.0062     53.8096     54.5100
  3295 CA   THR    148      0.0106     54.0542     64.1200
  3309 CA   PRO    149      0.0149     54.2963     70.5200
  3323 CA   VAL    151      0.0791     57.9078     83.1000
  3339 CA   HIS    152      0.2210     65.8918     88.5900
  3356 CA   HIS    153      0.6132     87.9546     93.9200
  3373 CA   ALA    155      1.9892    165.3550    102.2900
  3384 CA   ILE    150      0.0282     55.0477     77.5200
  3403 CA   VAL    154      0.9936    109.3534     99.3000
  3419 CA   ASN     40      0.0436     55.9139     77.5600
  3434 CA   ASP     65      0.0147     54.2848     71.9500

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.