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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0720
THR 260.0053
LYS 270.0047
CYS 280.0040
THR 290.0029
VAL 300.0024
SER 310.0014
HIS 320.0008
GLU 330.0019
VAL 340.0030
ALA 350.0039
ASP 360.0044
CYS 370.0047
SER 380.0049
HIS 390.0052
LEU 400.0051
LYS 410.0049
LEU 420.0047
THR 430.0043
GLN 440.0043
VAL 450.0045
PRO 460.0050
ASP 470.0047
ASP 480.0049
LEU 490.0054
PRO 500.0055
THR 510.0051
ASN 520.0057
ILE 530.0057
THR 540.0059
VAL 550.0060
LEU 560.0051
ASN 570.0054
LEU 580.0053
THR 590.0057
HIS 600.0058
ASN 610.0054
GLN 620.0047
LEU 630.0036
ARG 640.0033
ARG 650.0028
LEU 660.0021
PRO 670.0021
ALA 680.0040
ALA 690.0040
ASN 700.0037
PHE 710.0044
THR 720.0049
ARG 730.0054
TYR 740.0063
SER 750.0074
GLN 760.0074
LEU 770.0070
THR 780.0081
SER 790.0075
LEU 800.0061
ASP 810.0059
VAL 820.0049
GLY 830.0059
PHE 840.0065
ASN 850.0054
THR 860.0052
ILE 870.0034
SER 880.0043
LYS 890.0032
LEU 900.0015
GLU 910.0030
PRO 920.0044
GLU 930.0061
LEU 940.0052
CYS 950.0062
GLN 960.0075
LYS 970.0076
LEU 980.0077
PRO 990.0093
MET 1000.0101
LEU 1010.0074
LYS 1020.0081
VAL 1030.0074
LEU 1040.0054
ASN 1050.0057
LEU 1060.0042
GLN 1070.0061
HIS 1080.0074
ASN 1090.0062
GLU 1100.0065
LEU 1110.0057
SER 1120.0068
GLN 1130.0059
LEU 1140.0039
SER 1150.0043
ASP 1160.0041
LYS 1170.0046
THR 1180.0024
PHE 1190.0021
ALA 1200.0042
PHE 1210.0056
CYS 1220.0050
THR 1230.0059
ASN 1240.0072
LEU 1250.0059
THR 1260.0055
GLU 1270.0051
LEU 1280.0036
HIS 1290.0045
LEU 1300.0044
MET 1310.0063
SER 1320.0075
ASN 1330.0070
SER 1340.0077
ILE 1350.0064
GLN 1360.0063
LYS 1370.0057
ILE 1380.0045
LYS 1390.0046
ASN 1400.0042
ASN 1410.0026
PRO 1420.0019
PHE 1430.0017
VAL 1440.0014
LYS 1450.0021
GLN 1460.0016
LYS 1470.0018
ASN 1480.0029
LEU 1490.0031
ILE 1500.0041
THR 1510.0034
LEU 1520.0033
ASP 1530.0038
LEU 1540.0042
SER 1550.0049
HIS 1560.0057
ASN 1570.0057
GLY 1580.0055
LEU 1590.0046
SER 1600.0040
SER 1610.0038
THR 1620.0036
LYS 1630.0041
LEU 1640.0044
GLY 1650.0047
THR 1660.0038
GLN 1670.0043
VAL 1680.0048
GLN 1690.0046
LEU 1700.0047
GLU 1710.0054
ASN 1720.0054
LEU 1730.0048
GLN 1740.0046
GLU 1750.0041
LEU 1760.0037
LEU 1770.0035
LEU 1780.0029
SER 1790.0027
ASN 1800.0028
ASN 1810.0028
LYS 1820.0013
ILE 1830.0018
GLN 1840.0041
ALA 1850.0054
LEU 1860.0040
LYS 1870.0058
SER 1880.0062
GLU 1890.0081
GLU 1900.0063
LEU 1910.0048
ASP 1920.0061
ILE 1930.0066
PHE 1940.0060
ALA 1950.0067
ASN 1960.0074
SER 1970.0065
SER 1980.0064
LEU 1990.0055
LYS 2000.0061
LYS 2010.0050
LEU 2020.0036
GLU 2030.0039
LEU 2040.0027
SER 2050.0044
SER 2060.0062
ASN 2070.0041
GLN 2080.0059
ILE 2090.0052
LYS 2100.0075
GLU 2110.0076
PHE 2120.0060
SER 2130.0073
PRO 2140.0080
GLY 2150.0066
CYS 2160.0049
PHE 2170.0032
HIS 2180.0044
ALA 2190.0057
ILE 2200.0051
GLY 2210.0062
ARG 2220.0056
LEU 2230.0045
PHE 2240.0055
GLY 2250.0056
LEU 2260.0046
PHE 2270.0061
LEU 2280.0064
ASN 2290.0086
ASN 2300.0100
VAL 2310.0089
GLN 2320.0097
LEU 2330.0086
GLY 2340.0093
PRO 2350.0085
SER 2360.0096
LEU 2370.0083
THR 2380.0075
GLU 2390.0070
LYS 2400.0063
LEU 2410.0059
CYS 2420.0055
LEU 2430.0053
GLU 2440.0043
LEU 2450.0037
ALA 2460.0039
ASN 2470.0036
THR 2480.0036
SER 2490.0043
ILE 2500.0045
ARG 2510.0049
ASN 2520.0059
LEU 2530.0058
SER 2540.0073
LEU 2550.0079
SER 2560.0091
ASN 2570.0099
SER 2580.0092
GLN 2590.0096
LEU 2600.0085
SER 2610.0068
THR 2620.0054
THR 2630.0045
SER 2640.0035
ASN 2650.0024
THR 2660.0044
THR 2670.0051
PHE 2680.0049
LEU 2690.0041
GLY 2700.0044
LEU 2710.0046
LYS 2720.0046
TRP 2730.0044
THR 2740.0044
ASN 2750.0046
LEU 2760.0041
THR 2770.0046
MET 2780.0052
LEU 2790.0051
ASP 2800.0058
LEU 2810.0057
SER 2820.0065
TYR 2830.0073
ASN 2840.0067
ASN 2850.0064
LEU 2860.0042
ASN 2870.0027
VAL 2880.0021
VAL 2890.0019
GLY 2900.0019
ASN 2910.0016
ASP 2920.0013
SER 2930.0020
PHE 2940.0027
ALA 2950.0019
TRP 2960.0031
LEU 2970.0032
PRO 2980.0032
GLN 2990.0035
LEU 3000.0033
GLU 3010.0025
TYR 3020.0028
PHE 3030.0023
PHE 3040.0026
LEU 3050.0021
GLU 3060.0040
TYR 3070.0039
ASN 3080.0030
ASN 3090.0021
ILE 3100.0015
GLN 3110.0021
HIS 3120.0032
LEU 3130.0035
PHE 3140.0040
SER 3150.0052
HIS 3160.0033
SER 3170.0027
LEU 3180.0025
HIS 3190.0024
GLY 3200.0020
LEU 3210.0016
PHE 3220.0016
ASN 3230.0019
VAL 3240.0016
ARG 3250.0023
TYR 3260.0027
LEU 3270.0028
ASN 3280.0035
LEU 3290.0038
LYS 3300.0047
ARG 3310.0036
SER 3320.0033
PHE 3330.0034
THR 3340.0033
LYS 3350.0036
GLN 3360.0097
SER 3370.0102
ILE 3380.0132
SER 3390.0134
LEU 3400.0109
ALA 3410.0107
SER 3420.0081
LEU 3430.0083
PRO 3440.0062
LYS 3450.0062
ILE 3460.0067
ASP 3470.0065
ASP 3480.0066
PHE 3490.0056
SER 3500.0050
PHE 3510.0045
GLN 3520.0036
TRP 3530.0030
LEU 3540.0030
LYS 3550.0024
CYS 3560.0028
LEU 3570.0039
GLU 3580.0050
HIS 3590.0062
LEU 3600.0063
ASN 3610.0067
MET 3620.0067
GLU 3630.0075
ASP 3640.0081
ASN 3650.0078
ASP 3660.0090
ILE 3670.0081
PRO 3680.0085
GLY 3690.0080
ILE 3700.0073
LYS 3710.0073
SER 3720.0060
ASN 3730.0055
MET 3740.0063
PHE 3750.0059
THR 3760.0040
GLY 3770.0031
LEU 3780.0041
ILE 3790.0036
ASN 3800.0048
LEU 3810.0064
LYS 3820.0078
TYR 3830.0084
LEU 3840.0075
SER 3850.0086
LEU 3860.0081
SER 3870.0095
ASN 3880.0101
SER 3890.0090
PHE 3900.0088
THR 3910.0100
SER 3920.0080
LEU 3930.0064
ARG 3940.0049
THR 3950.0031
LEU 3960.0049
THR 3970.0044
ASN 3980.0053
GLU 3990.0050
THR 4000.0055
PHE 4010.0059
VAL 4020.0051
SER 4030.0056
LEU 4040.0069
ALA 4050.0068
HIS 4060.0053
SER 4070.0064
PRO 4080.0083
LEU 4090.0081
HIS 4100.0097
ILE 4110.0094
LEU 4120.0078
ASN 4130.0082
LEU 4140.0068
THR 4150.0081
LYS 4160.0092
ASN 4170.0077
LYS 4180.0069
ILE 4190.0050
SER 4200.0036
LYS 4210.0030
ILE 4220.0047
GLU 4230.0053
SER 4240.0074
ASP 4250.0088
ALA 4260.0067
PHE 4270.0079
SER 4280.0086
TRP 4290.0088
LEU 4300.0096
GLY 4310.0104
HIS 4320.0109
LEU 4330.0096
GLU 4340.0095
VAL 4350.0086
LEU 4360.0076
ASP 4370.0070
LEU 4380.0058
GLY 4390.0059
LEU 4400.0059
ASN 4410.0056
GLU 4420.0040
ILE 4430.0038
GLY 4440.0028
GLN 4450.0038
GLU 4460.0060
LEU 4470.0065
THR 4480.0077
GLY 4490.0079
GLN 4500.0091
GLU 4510.0080
TRP 4520.0084
ARG 4530.0099
GLY 4540.0110
LEU 4550.0101
GLU 4560.0105
ASN 4570.0097
ILE 4580.0077
PHE 4590.0061
GLU 4600.0053
ILE 4610.0049
TYR 4620.0044
LEU 4630.0040
SER 4640.0029
TYR 4650.0028
ASN 4660.0033
LYS 4670.0025
TYR 4680.0029
LEU 4690.0040
GLN 4700.0048
LEU 4710.0048
THR 4720.0061
ARG 4730.0063
ASN 4740.0068
SER 4750.0059
PHE 4760.0053
ALA 4770.0067
LEU 4780.0077
VAL 4790.0061
PRO 4800.0047
SER 4810.0035
LEU 4820.0027
GLN 4830.0023
ARG 4840.0032
LEU 4850.0019
MET 4860.0020
LEU 4870.0018
ARG 4880.0024
ARG 4890.0025
VAL 4900.0023
ALA 4910.0024
LEU 4920.0023
LYS 4930.0030
ASN 4940.0035
VAL 4950.0020
ASP 4960.0023
SER 4970.0039
SER 4980.0060
PRO 4990.0052
SER 5000.0026
PRO 5010.0026
PHE 5020.0025
GLN 5030.0040
PRO 5040.0034
LEU 5050.0029
ARG 5060.0060
ASN 5070.0056
LEU 5080.0056
THR 5090.0073
ILE 5100.0071
LEU 5110.0052
ASP 5120.0049
LEU 5130.0040
SER 5140.0046
ASN 5150.0042
ASN 5160.0032
ASN 5170.0034
ILE 5180.0027
ALA 5190.0027
ASN 5200.0021
ILE 5210.0029
ASN 5220.0043
ASP 5230.0062
ASP 5240.0065
MET 5250.0052
LEU 5260.0072
GLU 5270.0084
GLY 5280.0094
LEU 5290.0090
GLU 5300.0112
LYS 5310.0111
LEU 5320.0103
GLU 5330.0111
ILE 5340.0102
LEU 5350.0090
ASP 5360.0076
LEU 5370.0059
GLN 5380.0061
HIS 5390.0054
ASN 5400.0039
ASN 5410.0037
LEU 5420.0033
ALA 5430.0041
ARG 5440.0055
LEU 5450.0053
TRP 5460.0055
LYS 5470.0091
HIS 5480.0118
ALA 5490.0154
ASN 5500.0138
PRO 5510.0191
GLY 5520.0197
GLY 5530.0146
PRO 5540.0080
ILE 5550.0086
TYR 5560.0073
PHE 5570.0084
LEU 5580.0086
LYS 5590.0099
GLY 5600.0121
LEU 5610.0109
SER 5620.0110
HIS 5630.0114
LEU 5640.0108
HIS 5650.0106
ILE 5660.0102
LEU 5670.0081
ASN 5680.0072
LEU 5690.0051
GLU 5700.0053
SER 5710.0058
ASN 5720.0041
GLY 5730.0049
PHE 5740.0044
ASP 5750.0059
GLU 5760.0061
ILE 5770.0040
PRO 5780.0051
VAL 5790.0045
GLU 5800.0060
VAL 5810.0058
PHE 5820.0059
LYS 5830.0068
ASP 5840.0085
LEU 5850.0083
PHE 5860.0060
GLU 5870.0062
LEU 5880.0063
LYS 5890.0061
ILE 5900.0065
ILE 5910.0053
ASP 5920.0050
LEU 5930.0033
GLY 5940.0048
LEU 5950.0054
ASN 5960.0046
ASN 5970.0048
LEU 5980.0045
ASN 5990.0050
THR 6000.0052
LEU 6010.0040
PRO 6020.0047
ALA 6030.0045
SER 6040.0034
VAL 6050.0031
PHE 6060.0026
ASN 6070.0029
ASN 6080.0037
GLN 6090.0034
VAL 6100.0033
SER 6110.0033
LEU 6120.0025
LYS 6130.0033
SER 6140.0030
LEU 6150.0018
ASN 6160.0031
LEU 6170.0033
GLN 6180.0042
LYS 6190.0048
ASN 6200.0044
LEU 6210.0050
ILE 6220.0043
THR 6230.0040
SER 6240.0034
VAL 6250.0031
GLU 6260.0034
LYS 6270.0036
LYS 6280.0037
VAL 6290.0027
PHE 6300.0023
GLY 6310.0022
PRO 6320.0016
ALA 6330.0008
PHE 6340.0015
ARG 6350.0018
ASN 6360.0017
LEU 6370.0018
THR 6380.0027
GLU 6390.0023
LEU 6400.0017
ASP 6410.0031
MET 6420.0033
ARG 6430.0036
PHE 6440.0040
ASN 6450.0039
PRO 6460.0039
PHE 6470.0030
ASP 6480.0019
CYS 6490.0008
THR 6500.0008
CYS 6510.0013
GLU 6520.0024
SER 6530.0022
ILE 6540.0019
ALA 6550.0009
TRP 6560.0024
PHE 6570.0025
VAL 6580.0027
ASN 6590.0032
TRP 6600.0036
ILE 6610.0054
ASN 6620.0048
GLU 6630.0051
THR 6640.0061
HIS 6650.0075
THR 6660.0032
ASN 6670.0025
ILE 6680.0022
PRO 6690.0028
GLU 6700.0039
LEU 6710.0040
SER 6720.0038
SER 6730.0040
HIS 6740.0038
TYR 6750.0032
LEU 6760.0043
CYS 6770.0026
ASN 6780.0023
THR 6790.0009
PRO 6800.0009
PRO 6810.0036
HIS 6820.0049
TYR 6830.0038
HIS 6840.0042
GLY 6850.0058
PHE 6860.0051
PRO 6870.0052
VAL 6880.0038
ARG 6890.0045
LEU 6900.0046
PHE 6910.0052
ASP 6920.0048
THR 6930.0034
SER 6940.0076
SER 6950.0098
CYS 6960.0102
GLU 10.0235
ALA 20.0173
ALA 30.0066
ALA 40.0104
LYS 50.0110
MET 60.0051
GLN 70.0039
ARG 80.0046
LEU 90.0043
VAL 100.0031
LEU 110.0039
LEU 120.0042
LEU 130.0042
ALA 140.0041
ILE 150.0043
SER 160.0060
LEU 170.0072
LEU 180.0089
LEU 190.0070
TYR 200.0066
GLN 210.0121
ASP 220.0167
LEU 230.0174
PRO 240.0154
VAL 250.0125
ARG 260.0198
SER 270.0209
GLU 280.0140
PHE 290.0220
GLU 300.0201
LEU 310.0115
ASP 320.0099
ARG 330.0134
ILE 340.0099
CYS 350.0096
GLY 360.0151
TYR 370.0175
GLY 380.0127
THR 390.0090
ALA 400.0077
ARG 410.0095
CYS 420.0073
ARG 430.0069
LYS 440.0059
LYS 450.0053
CYS 460.0065
ARG 470.0091
SER 480.0111
GLN 490.0103
GLU 500.0072
TYR 510.0056
ARG 520.0032
ILE 530.0045
GLY 540.0032
ARG 550.0022
CYS 560.0039
PRO 570.0037
ASN 580.0046
THR 590.0043
TYR 600.0040
ALA 610.0038
CYS 620.0048
CYS 630.0042
LEU 640.0049
ARG 650.0049
LYS 660.0149
TRP 670.0146
ASP 680.0121
GLU 690.0152
SER 700.0156
LEU 710.0167
LEU 720.0166
ASN 730.0176
ARG 740.0182
THR 750.0187
LYS 760.0195
PRO 770.0157
GLU 780.0136
ALA 790.0139
ALA 800.0134
ALA 810.0297
LYS 820.0205
LYS 830.0182
GLU 840.0167
MET 850.0180
ASN 860.0212
LEU 870.0147
SER 880.0144
VAL 890.0088
GLY 900.0095
LEU 910.0076
GLY 920.0179
GLY 930.0250
GLY 940.0239
SER 950.0129
ASN 960.0147
LEU 970.0135
SER 980.0185
VAL 990.0192
GLY 1000.0247
LEU 1010.0218
GLY 1020.0171
GLU 1030.0161
ILE 1040.0307
GLY 1050.0387
GLY 1060.0113
GLY 1070.0148
SER 1080.0164
LYS 1090.0197
LEU 1100.0241
LEU 1110.0116
ASP 1120.0074
ILE 1130.0056
ASN 1140.0085
LEU 1150.0114
GLY 1160.0129
ARG 1170.0188
GLY 1180.0198
GLY 1190.0082
GLY 1200.0118
SER 1210.0031
MET 1220.0057
VAL 1230.0063
ASP 1240.0092
LEU 1250.0109
THR 1260.0093
PHE 1270.0069
GLY 1280.0097
GLY 1290.0112
VAL 1300.0106
GLY 1310.0092
GLY 1320.0105
GLY 1330.0097
SER 1340.0182
THR 1350.0239
PHE 1360.0260
THR 1370.0274
PHE 1380.0226
PHE 1390.0234
PRO 1400.0202
LEU 1410.0153
VAL 1420.0179
ILE 1430.0184
GLY 1440.0255
GLY 1450.0286
GLY 1460.0255
SER 1470.0239
ASP 1480.0211
ALA 1490.0188
MET 1500.0139
TYR 1510.0101
LEU 1520.0119
GLY 1530.0181
PHE 1540.0238
ALA 1550.0320
ALA 1560.0318
GLY 1570.0297
GLY 1580.0224
GLY 1590.0168
SER 1600.0101
ALA 1610.0222
GLY 1620.0210
GLY 1630.0230
GLU 1640.0201
ASN 1650.0227
HIS 1660.0189
VAL 1670.0182
ALA 1680.0165
PHE 1690.0159
GLY 1700.0155
PRO 1710.0547
GLY 1720.0552
PRO 1730.0495
GLY 1740.0164
VAL 1750.0141
ASP 1760.0220
LEU 1770.0159
THR 1780.0167
PHE 1790.0142
GLY 1800.0135
GLY 1810.0319
VAL 1820.0308
GLN 1830.0308
PHE 1840.0253
ALA 1850.0306
MET 1860.0157
VAL 1870.0212
ASN 1880.0145
ASN 1890.0119
GLY 1900.0105
PRO 1910.0213
GLY 1920.0173
PRO 1930.0219
GLY 1940.0167
GLU 1950.0091
SER 1960.0097
PHE 1970.0060
THR 1980.0045
ALA 1990.0034
GLN 2000.0055
PRO 2010.0041
ALA 2020.0030
ASP 2030.0056
MET 2040.0028
GLN 2050.0060
ALA 2060.0154
GLY 2070.0115
ILE 2080.0028
LYS 2090.0056
GLY 2100.0113
PRO 2110.0144
GLY 2120.0059
PRO 2130.0126
GLY 2140.0211
GLY 2150.0113
SER 2160.0155
ILE 2170.0085
GLN 2180.0168
VAL 2190.0195
ILE 2200.0307
ASN 2210.0315
GLY 2220.0230
SER 2230.0106
THR 2240.0110
ILE 2250.0144
GLY 2260.0238
THR 2270.0152
GLY 2280.0078
SER 2290.0120
LYS 2300.0175
LYS 2310.0199
THR 2320.0262
ILE 2330.0217
LEU 2340.0167
ILE 2350.0284
TYR 2360.0131
SER 2370.0119
ILE 2380.0092
ILE 2390.0052
GLY 2400.0069
VAL 2410.0103
LYS 2420.0153
LYS 2430.0203
GLY 2440.0214
THR 2450.0168
LEU 2460.0081
ALA 2470.0079
TRP 2480.0133
ALA 2490.0207
ARG 2500.0263
THR 2510.0244
GLY 2520.0140
PHE 2530.0127
SER 2540.0145
PRO 2550.0228
ALA 2560.0264
LYS 2570.0154
LYS 2580.0214
LEU 2590.0298
ASN 2600.0500
ALA 2610.0548
GLY 2620.0298
VAL 2630.0251
VAL 2640.0188
ARG 2650.0162
VAL 2660.0230
PHE 2670.0216
PHE 2680.0266
LEU 2690.0241
ASN 2700.0290
GLN 2710.0212
LYS 2720.0078
LYS 2730.0151
ALA 2740.0088
LYS 2750.0140
ASP 2760.0228
VAL 2770.0186
LEU 2780.0074
ARG 2790.0049
LYS 2800.0129
THR 2810.0308
SER 2820.0316
ARG 2830.0210
PRO 2840.0190
MET 2850.0147
VAL 2860.0433
ASP 2870.0291
LEU 2880.0221
THR 2890.0179
PHE 2900.0224
GLY 2910.0399
GLY 2920.0720

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.