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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1585
THR 260.0031
LYS 270.0031
CYS 280.0029
THR 290.0028
VAL 300.0027
SER 310.0026
HIS 320.0025
GLU 330.0026
VAL 340.0025
ALA 350.0026
ASP 360.0026
CYS 370.0027
SER 380.0025
HIS 390.0026
LEU 400.0028
LYS 410.0028
LEU 420.0028
THR 430.0028
GLN 440.0029
VAL 450.0028
PRO 460.0030
ASP 470.0032
ASP 480.0033
LEU 490.0031
PRO 500.0032
THR 510.0032
ASN 520.0030
ILE 530.0028
THR 540.0026
VAL 550.0024
LEU 560.0025
ASN 570.0024
LEU 580.0025
THR 590.0023
HIS 600.0024
ASN 610.0025
GLN 620.0026
LEU 630.0025
ARG 640.0025
ARG 650.0024
LEU 660.0024
PRO 670.0026
ALA 680.0026
ALA 690.0029
ASN 700.0029
PHE 710.0028
THR 720.0030
ARG 730.0031
TYR 740.0029
SER 750.0029
GLN 760.0028
LEU 770.0026
THR 780.0024
SER 790.0023
LEU 800.0023
ASP 810.0022
VAL 820.0022
GLY 830.0021
PHE 840.0021
ASN 850.0023
THR 860.0022
ILE 870.0021
SER 880.0020
LYS 890.0020
LEU 900.0021
GLU 910.0022
PRO 920.0022
GLU 930.0024
LEU 940.0024
CYS 950.0024
GLN 960.0025
LYS 970.0027
LEU 980.0026
PRO 990.0026
MET 1000.0026
LEU 1010.0024
LYS 1020.0023
VAL 1030.0021
LEU 1040.0020
ASN 1050.0020
LEU 1060.0019
GLN 1070.0018
HIS 1080.0018
ASN 1090.0019
GLU 1100.0019
LEU 1110.0017
SER 1120.0015
GLN 1130.0015
LEU 1140.0016
SER 1150.0016
ASP 1160.0017
LYS 1170.0019
THR 1180.0019
PHE 1190.0019
ALA 1200.0021
PHE 1210.0023
CYS 1220.0022
THR 1230.0023
ASN 1240.0024
LEU 1250.0022
THR 1260.0021
GLU 1270.0020
LEU 1280.0018
HIS 1290.0017
LEU 1300.0016
MET 1310.0016
SER 1320.0016
ASN 1330.0016
SER 1340.0015
ILE 1350.0014
GLN 1360.0012
LYS 1370.0013
ILE 1380.0013
LYS 1390.0014
ASN 1400.0015
ASN 1410.0017
PRO 1420.0017
PHE 1430.0018
VAL 1440.0020
LYS 1450.0021
GLN 1460.0021
LYS 1470.0023
ASN 1480.0023
LEU 1490.0021
ILE 1500.0020
THR 1510.0018
LEU 1520.0017
ASP 1530.0015
LEU 1540.0014
SER 1550.0013
HIS 1560.0013
ASN 1570.0013
GLY 1580.0012
LEU 1590.0012
SER 1600.0012
SER 1610.0013
THR 1620.0014
LYS 1630.0015
LEU 1640.0015
GLY 1650.0017
THR 1660.0018
GLN 1670.0020
VAL 1680.0021
GLN 1690.0021
LEU 1700.0020
GLU 1710.0022
ASN 1720.0022
LEU 1730.0020
GLN 1740.0019
GLU 1750.0017
LEU 1760.0015
LEU 1770.0014
LEU 1780.0013
SER 1790.0012
ASN 1800.0012
ASN 1810.0012
LYS 1820.0012
ILE 1830.0012
GLN 1840.0014
ALA 1850.0015
LEU 1860.0016
LYS 1870.0018
SER 1880.0020
GLU 1890.0019
GLU 1900.0017
LEU 1910.0018
ASP 1920.0020
ILE 1930.0020
PHE 1940.0020
ALA 1950.0022
ASN 1960.0024
SER 1970.0022
SER 1980.0021
LEU 1990.0019
LYS 2000.0018
LYS 2010.0016
LEU 2020.0015
GLU 2030.0013
LEU 2040.0012
SER 2050.0011
SER 2060.0011
ASN 2070.0011
GLN 2080.0012
ILE 2090.0013
LYS 2100.0015
GLU 2110.0017
PHE 2120.0017
SER 2130.0019
PRO 2140.0022
GLY 2150.0022
CYS 2160.0019
PHE 2170.0019
HIS 2180.0022
ALA 2190.0021
ILE 2200.0020
GLY 2210.0023
ARG 2220.0022
LEU 2230.0019
PHE 2240.0019
GLY 2250.0016
LEU 2260.0014
PHE 2270.0012
LEU 2280.0011
ASN 2290.0010
ASN 2300.0010
VAL 2310.0011
GLN 2320.0012
LEU 2330.0014
GLY 2340.0014
PRO 2350.0016
SER 2360.0018
LEU 2370.0017
THR 2380.0015
GLU 2390.0018
LYS 2400.0019
LEU 2410.0017
CYS 2420.0018
LEU 2430.0020
GLU 2440.0020
LEU 2450.0019
ALA 2460.0022
ASN 2470.0023
THR 2480.0022
SER 2490.0021
ILE 2500.0019
ARG 2510.0018
ASN 2520.0015
LEU 2530.0014
SER 2540.0012
LEU 2550.0011
SER 2560.0009
ASN 2570.0009
SER 2580.0011
GLN 2590.0012
LEU 2600.0012
SER 2610.0012
THR 2620.0013
THR 2630.0014
SER 2640.0016
ASN 2650.0018
THR 2660.0019
THR 2670.0017
PHE 2680.0017
LEU 2690.0020
GLY 2700.0020
LEU 2710.0019
LYS 2720.0021
TRP 2730.0023
THR 2740.0021
ASN 2750.0021
LEU 2760.0018
THR 2770.0017
MET 2780.0015
LEU 2790.0013
ASP 2800.0011
LEU 2810.0010
SER 2820.0008
TYR 2830.0008
ASN 2840.0009
ASN 2850.0010
LEU 2860.0010
ASN 2870.0011
VAL 2880.0012
VAL 2890.0012
GLY 2900.0014
ASN 2910.0015
ASP 2920.0017
SER 2930.0016
PHE 2940.0015
ALA 2950.0018
TRP 2960.0019
LEU 2970.0018
PRO 2980.0019
GLN 2990.0020
LEU 3000.0017
GLU 3010.0017
TYR 3020.0014
PHE 3030.0012
PHE 3040.0010
LEU 3050.0009
GLU 3060.0008
TYR 3070.0007
ASN 3080.0008
ASN 3090.0008
ILE 3100.0008
GLN 3110.0009
HIS 3120.0009
LEU 3130.0009
PHE 3140.0011
SER 3150.0013
HIS 3160.0014
SER 3170.0013
LEU 3180.0013
HIS 3190.0016
GLY 3200.0018
LEU 3210.0016
PHE 3220.0018
ASN 3230.0019
VAL 3240.0016
ARG 3250.0016
TYR 3260.0014
LEU 3270.0012
ASN 3280.0010
LEU 3290.0008
LYS 3300.0008
ARG 3310.0007
SER 3320.0007
PHE 3330.0007
THR 3340.0008
LYS 3350.0009
GLN 3360.0010
SER 3370.0012
ILE 3380.0013
SER 3390.0015
LEU 3400.0013
ALA 3410.0011
SER 3420.0010
LEU 3430.0008
PRO 3440.0007
LYS 3450.0007
ILE 3460.0008
ASP 3470.0010
ASP 3480.0011
PHE 3490.0013
SER 3500.0012
PHE 3510.0013
GLN 3520.0015
TRP 3530.0016
LEU 3540.0016
LYS 3550.0018
CYS 3560.0018
LEU 3570.0016
GLU 3580.0017
HIS 3590.0014
LEU 3600.0012
ASN 3610.0010
MET 3620.0009
GLU 3630.0009
ASP 3640.0008
ASN 3650.0007
ASP 3660.0008
ILE 3670.0007
PRO 3680.0007
GLY 3690.0009
ILE 3700.0010
LYS 3710.0010
SER 3720.0012
ASN 3730.0013
MET 3740.0011
PHE 3750.0013
THR 3760.0015
GLY 3770.0017
LEU 3780.0017
ILE 3790.0019
ASN 3800.0019
LEU 3810.0017
LYS 3820.0017
TYR 3830.0015
LEU 3840.0013
SER 3850.0011
LEU 3860.0010
SER 3870.0011
ASN 3880.0010
SER 3890.0008
PHE 3900.0009
THR 3910.0009
SER 3920.0011
LEU 3930.0012
ARG 3940.0014
THR 3950.0016
LEU 3960.0016
THR 3970.0018
ASN 3980.0020
GLU 3990.0017
THR 4000.0015
PHE 4010.0016
VAL 4020.0017
SER 4030.0016
LEU 4040.0017
ALA 4050.0020
HIS 4060.0020
SER 4070.0019
PRO 4080.0020
LEU 4090.0018
HIS 4100.0019
ILE 4110.0016
LEU 4120.0015
ASN 4130.0013
LEU 4140.0013
THR 4150.0013
LYS 4160.0013
ASN 4170.0012
LYS 4180.0014
ILE 4190.0016
SER 4200.0018
LYS 4210.0020
ILE 4220.0020
GLU 4230.0022
SER 4240.0024
ASP 4250.0024
ALA 4260.0020
PHE 4270.0021
SER 4280.0023
TRP 4290.0022
LEU 4300.0021
GLY 4310.0024
HIS 4320.0022
LEU 4330.0020
GLU 4340.0020
VAL 4350.0018
LEU 4360.0017
ASP 4370.0016
LEU 4380.0017
GLY 4390.0017
LEU 4400.0016
ASN 4410.0016
GLU 4420.0019
ILE 4430.0020
GLY 4440.0024
GLN 4450.0025
GLU 4460.0029
LEU 4470.0028
THR 4480.0030
GLY 4490.0029
GLN 4500.0029
GLU 4510.0025
TRP 4520.0025
ARG 4530.0027
GLY 4540.0026
LEU 4550.0025
GLU 4560.0027
ASN 4570.0024
ILE 4580.0022
PHE 4590.0021
GLU 4600.0019
ILE 4610.0020
TYR 4620.0018
LEU 4630.0020
SER 4640.0020
TYR 4650.0020
ASN 4660.0021
LYS 4670.0023
TYR 4680.0026
LEU 4690.0027
GLN 4700.0030
LEU 4710.0032
THR 4720.0035
ARG 4730.0037
ASN 4740.0035
SER 4750.0031
PHE 4760.0029
ALA 4770.0032
LEU 4780.0031
VAL 4790.0028
PRO 4800.0030
SER 4810.0027
LEU 4820.0025
GLN 4830.0023
ARG 4840.0021
LEU 4850.0022
MET 4860.0021
LEU 4870.0024
ARG 4880.0023
ARG 4890.0024
VAL 4900.0025
ALA 4910.0029
LEU 4920.0030
LYS 4930.0033
ASN 4940.0036
VAL 4950.0035
ASP 4960.0039
SER 4970.0040
SER 4980.0044
PRO 4990.0042
SER 5000.0038
PRO 5010.0035
PHE 5020.0033
GLN 5030.0036
PRO 5040.0035
LEU 5050.0031
ARG 5060.0033
ASN 5070.0029
LEU 5080.0027
THR 5090.0023
ILE 5100.0021
LEU 5110.0024
ASP 5120.0023
LEU 5130.0026
SER 5140.0026
ASN 5150.0027
ASN 5160.0030
ASN 5170.0033
ILE 5180.0035
ALA 5190.0039
ASN 5200.0041
ILE 5210.0039
ASN 5220.0042
ASP 5230.0042
ASP 5240.0041
MET 5250.0037
LEU 5260.0035
GLU 5270.0038
GLY 5280.0037
LEU 5290.0033
GLU 5300.0033
LYS 5310.0028
LEU 5320.0026
GLU 5330.0023
ILE 5340.0021
LEU 5350.0025
ASP 5360.0024
LEU 5370.0028
GLN 5380.0027
HIS 5390.0030
ASN 5400.0033
ASN 5410.0037
LEU 5420.0038
ALA 5430.0040
ARG 5440.0044
LEU 5450.0043
TRP 5460.0042
LYS 5470.0046
HIS 5480.0048
ALA 5490.0052
ASN 5500.0050
PRO 5510.0054
GLY 5520.0053
GLY 5530.0050
PRO 5540.0046
ILE 5550.0043
TYR 5560.0040
PHE 5570.0038
LEU 5580.0035
LYS 5590.0037
GLY 5600.0036
LEU 5610.0031
SER 5620.0030
HIS 5630.0026
LEU 5640.0026
HIS 5650.0022
ILE 5660.0021
LEU 5670.0025
ASN 5680.0025
LEU 5690.0029
GLU 5700.0029
SER 5710.0032
ASN 5720.0035
GLY 5730.0038
PHE 5740.0038
ASP 5750.0041
GLU 5760.0041
ILE 5770.0038
PRO 5780.0041
VAL 5790.0039
GLU 5800.0039
VAL 5810.0036
PHE 5820.0032
LYS 5830.0034
ASP 5840.0033
LEU 5850.0029
PHE 5860.0026
GLU 5870.0023
LEU 5880.0023
LYS 5890.0020
ILE 5900.0020
ILE 5910.0023
ASP 5920.0024
LEU 5930.0028
GLY 5940.0028
LEU 5950.0032
ASN 5960.0035
ASN 5970.0039
LEU 5980.0037
ASN 5990.0039
THR 6000.0040
LEU 6010.0037
PRO 6020.0038
ALA 6030.0036
SER 6040.0034
VAL 6050.0034
PHE 6060.0028
ASN 6070.0028
ASN 6080.0028
GLN 6090.0024
VAL 6100.0022
SER 6110.0020
LEU 6120.0019
LYS 6130.0016
SER 6140.0017
LEU 6150.0021
ASN 6160.0023
LEU 6170.0027
GLN 6180.0028
LYS 6190.0032
ASN 6200.0035
LEU 6210.0038
ILE 6220.0036
THR 6230.0037
SER 6240.0036
VAL 6250.0031
GLU 6260.0031
LYS 6270.0029
LYS 6280.0032
VAL 6290.0031
PHE 6300.0027
GLY 6310.0024
PRO 6320.0024
ALA 6330.0022
PHE 6340.0019
ARG 6350.0017
ASN 6360.0014
LEU 6370.0014
THR 6380.0011
GLU 6390.0014
LEU 6400.0018
ASP 6410.0021
MET 6420.0026
ARG 6430.0027
PHE 6440.0032
ASN 6450.0034
PRO 6460.0038
PHE 6470.0036
ASP 6480.0038
CYS 6490.0037
THR 6500.0038
CYS 6510.0035
GLU 6520.0037
SER 6530.0036
ILE 6540.0031
ALA 6550.0029
TRP 6560.0026
PHE 6570.0025
VAL 6580.0024
ASN 6590.0021
TRP 6600.0019
ILE 6610.0018
ASN 6620.0015
GLU 6630.0011
THR 6640.0010
HIS 6650.0005
THR 6660.0011
ASN 6670.0012
ILE 6680.0016
PRO 6690.0018
GLU 6700.0023
LEU 6710.0022
SER 6720.0026
SER 6730.0029
HIS 6740.0029
TYR 6750.0029
LEU 6760.0034
CYS 6770.0037
ASN 6780.0041
THR 6790.0043
PRO 6800.0045
PRO 6810.0047
HIS 6820.0045
TYR 6830.0041
HIS 6840.0043
GLY 6850.0040
PHE 6860.0037
PRO 6870.0032
VAL 6880.0030
ARG 6890.0025
LEU 6900.0028
PHE 6910.0030
ASP 6920.0029
THR 6930.0027
SER 6940.0027
SER 6950.0032
CYS 6960.0032
GLU 10.0016
ALA 20.0018
ALA 30.0017
ALA 40.0014
LYS 50.0014
MET 60.0015
GLN 70.0013
ARG 80.0011
LEU 90.0012
VAL 100.0013
LEU 110.0011
LEU 120.0010
LEU 130.0011
ALA 140.0011
ILE 150.0009
SER 160.0008
LEU 170.0010
LEU 180.0012
LEU 190.0010
TYR 200.0010
GLN 210.0013
ASP 220.0014
LEU 230.0013
PRO 240.0016
VAL 250.0014
ARG 260.0018
SER 270.0019
GLU 280.0020
PHE 290.0022
GLU 300.0022
LEU 310.0020
ASP 320.0021
ARG 330.0023
ILE 340.0021
CYS 350.0021
GLY 360.0020
TYR 370.0019
GLY 380.0019
THR 390.0020
ALA 400.0021
ARG 410.0022
CYS 420.0023
ARG 430.0025
LYS 440.0026
LYS 450.0027
CYS 460.0026
ARG 470.0026
SER 480.0026
GLN 490.0023
GLU 500.0023
TYR 510.0023
ARG 520.0023
ILE 530.0022
GLY 540.0022
ARG 550.0022
CYS 560.0022
PRO 570.0021
ASN 580.0022
THR 590.0023
TYR 600.0024
ALA 610.0025
CYS 620.0023
CYS 630.0022
LEU 640.0021
ARG 650.0020
LYS 660.0019
TRP 670.0015
ASP 680.0012
GLU 690.0006
SER 700.0007
LEU 710.0006
LEU 720.0005
ASN 730.0006
ARG 740.0006
THR 750.0006
LYS 760.0013
PRO 770.0015
GLU 780.0017
ALA 790.0022
ALA 800.0020
ALA 810.0032
LYS 820.0033
LYS 830.0035
GLU 840.0042
MET 850.0042
ASN 860.0050
LEU 870.0050
SER 880.0057
VAL 890.0059
GLY 900.0066
LEU 910.0069
GLY 920.0076
GLY 930.0083
GLY 940.0081
SER 950.0076
ASN 960.0070
LEU 970.0065
SER 980.0061
VAL 990.0054
GLY 1000.0052
LEU 1010.0045
GLY 1020.0046
GLU 1030.0034
ILE 1040.0040
GLY 1050.0039
GLY 1060.0046
GLY 1070.0043
SER 1080.0035
LYS 1090.0030
LEU 1100.0030
LEU 1110.0033
ASP 1120.0043
ILE 1130.0050
ASN 1140.0059
LEU 1150.0064
GLY 1160.0072
ARG 1170.0079
GLY 1180.0080
GLY 1190.0080
GLY 1200.0076
SER 1210.0066
MET 1220.0063
VAL 1230.0057
ASP 1240.0057
LEU 1250.0048
THR 1260.0052
PHE 1270.0044
GLY 1280.0048
GLY 1290.0043
VAL 1300.0037
GLY 1310.0027
GLY 1320.0021
GLY 1330.0019
SER 1340.0018
THR 1350.0020
PHE 1360.0020
THR 1370.0025
PHE 1380.0030
PHE 1390.0035
PRO 1400.0041
LEU 1410.0044
VAL 1420.0059
ILE 1430.0047
GLY 1440.0053
GLY 1450.0059
GLY 1460.0050
SER 1470.0047
ASP 1480.0056
ALA 1490.0042
MET 1500.0040
TYR 1510.0028
LEU 1520.0024
GLY 1530.0015
PHE 1540.0012
ALA 1550.0015
ALA 1560.0019
GLY 1570.0021
GLY 1580.0021
GLY 1590.0022
SER 1600.0022
ALA 1610.0032
GLY 1620.0037
GLY 1630.0047
GLU 1640.0051
ASN 1650.0051
HIS 1660.0055
VAL 1670.0048
ALA 1680.0055
PHE 1690.0049
GLY 1700.0057
PRO 1710.0057
GLY 1720.0052
PRO 1730.0037
GLY 1740.0050
VAL 1750.0046
ASP 1760.0063
LEU 1770.0055
THR 1780.0064
PHE 1790.0058
GLY 1800.0069
GLY 1810.0093
VAL 1820.0090
GLN 1830.0090
PHE 1840.0081
ALA 1850.0090
MET 1860.0085
VAL 1870.0120
ASN 1880.0116
ASN 1890.0173
GLY 1900.0189
PRO 1910.0516
GLY 1920.0954
PRO 1930.1359
GLY 1940.1585
GLU 1950.1201
SER 1960.1125
PHE 1970.0834
THR 1980.0673
ALA 1990.0418
GLN 2000.0211
PRO 2010.0259
ALA 2020.0354
ASP 2030.0359
MET 2040.0374
GLN 2050.0655
ALA 2060.0651
GLY 2070.0617
ILE 2080.0432
LYS 2090.0376
GLY 2100.0255
PRO 2110.0098
GLY 2120.0074
PRO 2130.0034
GLY 2140.0041
GLY 2150.0036
SER 2160.0032
ILE 2170.0052
GLN 2180.0084
VAL 2190.0095
ILE 2200.0134
ASN 2210.0141
GLY 2220.0125
SER 2230.0151
THR 2240.0151
ILE 2250.0141
GLY 2260.0164
THR 2270.0170
GLY 2280.0142
SER 2290.0128
LYS 2300.0090
LYS 2310.0079
THR 2320.0052
ILE 2330.0057
LEU 2340.0062
ILE 2350.0052
TYR 2360.0076
SER 2370.0071
ILE 2380.0077
ILE 2390.0090
GLY 2400.0091
VAL 2410.0073
LYS 2420.0067
LYS 2430.0046
GLY 2440.0073
THR 2450.0100
LEU 2460.0116
ALA 2470.0120
TRP 2480.0117
ALA 2490.0115
ARG 2500.0110
THR 2510.0102
GLY 2520.0095
PHE 2530.0067
SER 2540.0067
PRO 2550.0051
ALA 2560.0080
LYS 2570.0094
LYS 2580.0109
LEU 2590.0138
ASN 2600.0168
ALA 2610.0166
GLY 2620.0132
VAL 2630.0118
VAL 2640.0079
ARG 2650.0076
VAL 2660.0053
PHE 2670.0082
PHE 2680.0106
LEU 2690.0145
ASN 2700.0175
GLN 2710.0172
LYS 2720.0244
LYS 2730.0261
ALA 2740.0217
LYS 2750.0253
ASP 2760.0327
VAL 2770.0313
LEU 2780.0298
ARG 2790.0374
LYS 2800.0416
THR 2810.0421
SER 2820.0427
ARG 2830.0364
PRO 2840.0359
MET 2850.0299
VAL 2860.0231
ASP 2870.0247
LEU 2880.0222
THR 2890.0286
PHE 2900.0278
GLY 2910.0341
GLY 2920.0426

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.