CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0422
THR 260.0029
LYS 270.0060
CYS 280.0079
THR 290.0121
VAL 300.0155
SER 310.0204
HIS 320.0225
GLU 330.0189
VAL 340.0153
ALA 350.0118
ASP 360.0100
CYS 370.0054
SER 380.0067
HIS 390.0075
LEU 400.0039
LYS 410.0065
LEU 420.0049
THR 430.0083
GLN 440.0081
VAL 450.0069
PRO 460.0085
ASP 470.0127
ASP 480.0137
LEU 490.0132
PRO 500.0170
THR 510.0181
ASN 520.0191
ILE 530.0152
THR 540.0141
VAL 550.0113
LEU 560.0083
ASN 570.0068
LEU 580.0031
THR 590.0064
HIS 600.0085
ASN 610.0064
GLN 620.0087
LEU 630.0075
ARG 640.0106
ARG 650.0099
LEU 660.0085
PRO 670.0118
ALA 680.0128
ALA 690.0152
ASN 700.0124
PHE 710.0118
THR 720.0157
ARG 730.0161
TYR 740.0134
SER 750.0149
GLN 760.0150
LEU 770.0111
THR 780.0105
SER 790.0078
LEU 800.0044
ASP 810.0040
VAL 820.0029
GLY 830.0062
PHE 840.0089
ASN 850.0085
THR 860.0104
ILE 870.0090
SER 880.0114
LYS 890.0108
LEU 900.0085
GLU 910.0106
PRO 920.0107
GLU 930.0123
LEU 940.0098
CYS 950.0091
GLN 960.0127
LYS 970.0129
LEU 980.0107
PRO 990.0120
MET 1000.0113
LEU 1010.0071
LYS 1020.0065
VAL 1030.0049
LEU 1040.0021
ASN 1050.0033
LEU 1060.0044
GLN 1070.0068
HIS 1080.0094
ASN 1090.0092
GLU 1100.0111
LEU 1110.0087
SER 1120.0103
GLN 1130.0103
LEU 1140.0084
SER 1150.0092
ASP 1160.0087
LYS 1170.0095
THR 1180.0077
PHE 1190.0058
ALA 1200.0075
PHE 1210.0084
CYS 1220.0060
THR 1230.0065
ASN 1240.0065
LEU 1250.0040
THR 1260.0044
GLU 1270.0035
LEU 1280.0023
HIS 1290.0042
LEU 1300.0056
MET 1310.0075
SER 1320.0096
ASN 1330.0091
SER 1340.0108
ILE 1350.0095
GLN 1360.0096
LYS 1370.0089
ILE 1380.0074
LYS 1390.0082
ASN 1400.0078
ASN 1410.0062
PRO 1420.0056
PHE 1430.0036
VAL 1440.0042
LYS 1450.0049
GLN 1460.0030
LYS 1470.0036
ASN 1480.0038
LEU 1490.0020
ILE 1500.0032
THR 1510.0036
LEU 1520.0034
ASP 1530.0051
LEU 1540.0061
SER 1550.0078
HIS 1560.0093
ASN 1570.0090
GLY 1580.0096
LEU 1590.0080
SER 1600.0082
SER 1610.0065
THR 1620.0052
LYS 1630.0047
LEU 1640.0042
GLY 1650.0041
THR 1660.0047
GLN 1670.0036
VAL 1680.0022
GLN 1690.0019
LEU 1700.0012
GLU 1710.0017
ASN 1720.0021
LEU 1730.0018
GLN 1740.0034
GLU 1750.0041
LEU 1760.0044
LEU 1770.0057
LEU 1780.0062
SER 1790.0076
ASN 1800.0088
ASN 1810.0084
LYS 1820.0082
ILE 1830.0066
GLN 1840.0063
ALA 1850.0047
LEU 1860.0044
LYS 1870.0036
SER 1880.0026
GLU 1890.0030
GLU 1900.0035
LEU 1910.0030
ASP 1920.0021
ILE 1930.0021
PHE 1940.0016
ALA 1950.0010
ASN 1960.0012
SER 1970.0015
SER 1980.0025
LEU 1990.0033
LYS 2000.0045
LYS 2010.0052
LEU 2020.0050
GLU 2030.0060
LEU 2040.0061
SER 2050.0072
SER 2060.0077
ASN 2070.0069
GLN 2080.0065
ILE 2090.0054
LYS 2100.0049
GLU 2110.0038
PHE 2120.0034
SER 2130.0028
PRO 2140.0021
GLY 2150.0020
CYS 2160.0028
PHE 2170.0030
HIS 2180.0022
ALA 2190.0019
ILE 2200.0022
GLY 2210.0019
ARG 2220.0028
LEU 2230.0037
PHE 2240.0047
GLY 2250.0055
LEU 2260.0055
PHE 2270.0062
LEU 2280.0060
ASN 2290.0068
ASN 2300.0070
VAL 2310.0060
GLN 2320.0052
LEU 2330.0043
GLY 2340.0038
PRO 2350.0034
SER 2360.0030
LEU 2370.0033
THR 2380.0038
GLU 2390.0033
LYS 2400.0028
LEU 2410.0035
CYS 2420.0037
LEU 2430.0029
GLU 2440.0029
LEU 2450.0036
ALA 2460.0033
ASN 2470.0033
THR 2480.0037
SER 2490.0044
ILE 2500.0048
ARG 2510.0061
ASN 2520.0064
LEU 2530.0059
SER 2540.0064
LEU 2550.0059
SER 2560.0065
ASN 2570.0060
SER 2580.0052
GLN 2590.0045
LEU 2600.0041
SER 2610.0031
THR 2620.0031
THR 2630.0036
SER 2640.0035
ASN 2650.0040
THR 2660.0035
THR 2670.0036
PHE 2680.0042
LEU 2690.0039
GLY 2700.0037
LEU 2710.0043
LYS 2720.0045
TRP 2730.0042
THR 2740.0048
ASN 2750.0058
LEU 2760.0065
THR 2770.0075
MET 2780.0075
LEU 2790.0067
ASP 2800.0068
LEU 2810.0062
SER 2820.0066
TYR 2830.0060
ASN 2840.0048
ASN 2850.0040
LEU 2860.0036
ASN 2870.0028
VAL 2880.0030
VAL 2890.0040
GLY 2900.0041
ASN 2910.0050
ASP 2920.0056
SER 2930.0049
PHE 2940.0059
ALA 2950.0065
TRP 2960.0057
LEU 2970.0065
PRO 2980.0075
GLN 2990.0080
LEU 3000.0077
GLU 3010.0091
TYR 3020.0088
PHE 3030.0077
PHE 3040.0073
LEU 3050.0064
GLU 3060.0070
TYR 3070.0059
ASN 3080.0045
ASN 3090.0031
ILE 3100.0035
GLN 3110.0035
HIS 3120.0045
LEU 3130.0053
PHE 3140.0058
SER 3150.0070
HIS 3160.0066
SER 3170.0058
LEU 3180.0067
HIS 3190.0072
GLY 3200.0078
LEU 3210.0081
PHE 3220.0094
ASN 3230.0099
VAL 3240.0091
ARG 3250.0099
TYR 3260.0094
LEU 3270.0083
ASN 3280.0078
LEU 3290.0069
LYS 3300.0069
ARG 3310.0058
SER 3320.0052
PHE 3330.0043
THR 3340.0030
LYS 3350.0028
GLN 3360.0029
SER 3370.0033
ILE 3380.0040
SER 3390.0055
LEU 3400.0059
ALA 3410.0051
SER 3420.0042
LEU 3430.0043
PRO 3440.0043
LYS 3450.0056
ILE 3460.0061
ASP 3470.0068
ASP 3480.0078
PHE 3490.0083
SER 3500.0075
PHE 3510.0082
GLN 3520.0092
TRP 3530.0090
LEU 3540.0092
LYS 3550.0104
CYS 3560.0108
LEU 3570.0100
GLU 3580.0104
HIS 3590.0096
LEU 3600.0087
ASN 3610.0081
MET 3620.0073
GLU 3630.0069
ASP 3640.0060
ASN 3650.0055
ASP 3660.0048
ILE 3670.0055
PRO 3680.0057
GLY 3690.0065
ILE 3700.0074
LYS 3710.0076
SER 3720.0086
ASN 3730.0088
MET 3740.0081
PHE 3750.0087
THR 3760.0095
GLY 3770.0102
LEU 3780.0101
ILE 3790.0111
ASN 3800.0112
LEU 3810.0101
LYS 3820.0102
TYR 3830.0094
LEU 3840.0087
SER 3850.0080
LEU 3860.0072
SER 3870.0067
ASN 3880.0060
SER 3890.0063
PHE 3900.0058
THR 3910.0054
SER 3920.0051
LEU 3930.0055
ARG 3940.0051
THR 3950.0056
LEU 3960.0061
THR 3970.0066
ASN 3980.0073
GLU 3990.0079
THR 4000.0075
PHE 4010.0081
VAL 4020.0089
SER 4030.0091
LEU 4040.0092
ALA 4050.0099
HIS 4060.0106
SER 4070.0103
PRO 4080.0105
LEU 4090.0097
HIS 4100.0095
ILE 4110.0086
LEU 4120.0079
ASN 4130.0073
LEU 4140.0065
THR 4150.0061
LYS 4160.0057
ASN 4170.0055
LYS 4180.0050
ILE 4190.0050
SER 4200.0047
LYS 4210.0050
ILE 4220.0054
GLU 4230.0057
SER 4240.0060
ASP 4250.0067
ALA 4260.0069
PHE 4270.0073
SER 4280.0079
TRP 4290.0086
LEU 4300.0085
GLY 4310.0085
HIS 4320.0090
LEU 4330.0083
GLU 4340.0083
VAL 4350.0080
LEU 4360.0069
ASP 4370.0066
LEU 4380.0057
GLY 4390.0056
LEU 4400.0054
ASN 4410.0051
GLU 4420.0045
ILE 4430.0044
GLY 4440.0041
GLN 4450.0041
GLU 4460.0039
LEU 4470.0042
THR 4480.0042
GLY 4490.0047
GLN 4500.0052
GLU 4510.0056
TRP 4520.0059
ARG 4530.0063
GLY 4540.0071
LEU 4550.0070
GLU 4560.0066
ASN 4570.0074
ILE 4580.0070
PHE 4590.0074
GLU 4600.0074
ILE 4610.0062
TYR 4620.0060
LEU 4630.0051
SER 4640.0053
TYR 4650.0049
ASN 4660.0047
LYS 4670.0042
TYR 4680.0039
LEU 4690.0040
GLN 4700.0037
LEU 4710.0039
THR 4720.0037
ARG 4730.0038
ASN 4740.0042
SER 4750.0044
PHE 4760.0048
ALA 4770.0044
LEU 4780.0049
VAL 4790.0057
PRO 4800.0058
SER 4810.0062
LEU 4820.0062
GLN 4830.0072
ARG 4840.0072
LEU 4850.0062
MET 4860.0056
LEU 4870.0051
ARG 4880.0052
ARG 4890.0047
VAL 4900.0044
ALA 4910.0040
LEU 4920.0042
LYS 4930.0039
ASN 4940.0039
VAL 4950.0044
ASP 4960.0043
SER 4970.0040
SER 4980.0042
PRO 4990.0048
SER 5000.0050
PRO 5010.0047
PHE 5020.0055
GLN 5030.0056
PRO 5040.0057
LEU 5050.0063
ARG 5060.0069
ASN 5070.0076
LEU 5080.0073
THR 5090.0082
ILE 5100.0078
LEU 5110.0065
ASP 5120.0061
LEU 5130.0054
SER 5140.0052
ASN 5150.0046
ASN 5160.0041
ASN 5170.0036
ILE 5180.0040
ALA 5190.0039
ASN 5200.0044
ILE 5210.0050
ASN 5220.0056
ASP 5230.0065
ASP 5240.0068
MET 5250.0063
LEU 5260.0071
GLU 5270.0076
GLY 5280.0083
LEU 5290.0083
GLU 5300.0092
LYS 5310.0095
LEU 5320.0087
GLU 5330.0092
ILE 5340.0084
LEU 5350.0075
ASP 5360.0064
LEU 5370.0054
GLN 5380.0045
HIS 5390.0036
ASN 5400.0035
ASN 5410.0028
LEU 5420.0037
ALA 5430.0032
ARG 5440.0040
LEU 5450.0051
TRP 5460.0052
LYS 5470.0055
HIS 5480.0072
ALA 5490.0073
ASN 5500.0068
PRO 5510.0078
GLY 5520.0090
GLY 5530.0082
PRO 5540.0068
ILE 5550.0069
TYR 5560.0076
PHE 5570.0076
LEU 5580.0077
LYS 5590.0091
GLY 5600.0105
LEU 5610.0100
SER 5620.0111
HIS 5630.0112
LEU 5640.0097
HIS 5650.0097
ILE 5660.0084
LEU 5670.0071
ASN 5680.0060
LEU 5690.0045
GLU 5700.0036
SER 5710.0026
ASN 5720.0024
GLY 5730.0015
PHE 5740.0026
ASP 5750.0037
GLU 5760.0048
ILE 5770.0052
PRO 5780.0071
VAL 5790.0078
GLU 5800.0088
VAL 5810.0075
PHE 5820.0078
LYS 5830.0096
ASP 5840.0107
LEU 5850.0096
PHE 5860.0109
GLU 5870.0112
LEU 5880.0096
LYS 5890.0092
ILE 5900.0081
ILE 5910.0060
ASP 5920.0051
LEU 5930.0031
GLY 5940.0033
LEU 5950.0037
ASN 5960.0025
ASN 5970.0038
LEU 5980.0040
ASN 5990.0065
THR 6000.0079
LEU 6010.0060
PRO 6020.0083
ALA 6030.0091
SER 6040.0088
VAL 6050.0075
PHE 6060.0064
ASN 6070.0085
ASN 6080.0101
GLN 6090.0087
VAL 6100.0101
SER 6110.0106
LEU 6120.0082
LYS 6130.0084
SER 6140.0073
LEU 6150.0049
ASN 6160.0048
LEU 6170.0029
GLN 6180.0061
LYS 6190.0075
ASN 6200.0055
LEU 6210.0079
ILE 6220.0077
THR 6230.0113
SER 6240.0110
VAL 6250.0081
GLU 6260.0088
LYS 6270.0079
LYS 6280.0100
VAL 6290.0073
PHE 6300.0045
GLY 6310.0051
PRO 6320.0065
ALA 6330.0047
PHE 6340.0029
ARG 6350.0049
ASN 6360.0070
LEU 6370.0064
THR 6380.0091
GLU 6390.0087
LEU 6400.0064
ASP 6410.0074
MET 6420.0065
ARG 6430.0102
PHE 6440.0119
ASN 6450.0104
PRO 6460.0136
PHE 6470.0137
ASP 6480.0164
CYS 6490.0184
THR 6500.0201
CYS 6510.0191
GLU 6520.0182
SER 6530.0151
ILE 6540.0131
ALA 6550.0140
TRP 6560.0099
PHE 6570.0081
VAL 6580.0105
ASN 6590.0088
TRP 6600.0053
ILE 6610.0072
ASN 6620.0090
GLU 6630.0057
THR 6640.0058
HIS 6650.0094
THR 6660.0074
ASN 6670.0107
ILE 6680.0105
PRO 6690.0141
GLU 6700.0163
LEU 6710.0145
SER 6720.0181
SER 6730.0197
HIS 6740.0165
TYR 6750.0145
LEU 6760.0177
CYS 6770.0186
ASN 6780.0198
THR 6790.0207
PRO 6800.0244
PRO 6810.0279
HIS 6820.0292
TYR 6830.0251
HIS 6840.0251
GLY 6850.0244
PHE 6860.0232
PRO 6870.0196
VAL 6880.0161
ARG 6890.0153
LEU 6900.0193
PHE 6910.0191
ASP 6920.0206
THR 6930.0181
SER 6940.0209
SER 6950.0241
CYS 6960.0216
GLU 10.0088
ALA 20.0090
ALA 30.0080
ALA 40.0060
LYS 50.0059
MET 60.0066
GLN 70.0048
ARG 80.0036
LEU 90.0054
VAL 100.0056
LEU 110.0039
LEU 120.0048
LEU 130.0069
ALA 140.0062
ILE 150.0060
SER 160.0083
LEU 170.0106
LEU 180.0093
LEU 190.0112
TYR 200.0145
GLN 210.0160
ASP 220.0159
LEU 230.0196
PRO 240.0238
VAL 250.0249
ARG 260.0323
SER 270.0336
GLU 280.0302
PHE 290.0319
GLU 300.0341
LEU 310.0333
ASP 320.0277
ARG 330.0261
ILE 340.0294
CYS 350.0287
GLY 360.0328
TYR 370.0385
GLY 380.0352
THR 390.0326
ALA 400.0266
ARG 410.0227
CYS 420.0196
ARG 430.0148
LYS 440.0103
LYS 450.0093
CYS 460.0141
ARG 470.0142
SER 480.0171
GLN 490.0206
GLU 500.0205
TYR 510.0216
ARG 520.0200
ILE 530.0244
GLY 540.0222
ARG 550.0196
CYS 560.0211
PRO 570.0223
ASN 580.0190
THR 590.0149
TYR 600.0143
ALA 610.0156
CYS 620.0208
CYS 630.0197
LEU 640.0245
ARG 650.0239
LYS 660.0276
TRP 670.0268
ASP 680.0219
GLU 690.0248
SER 700.0196
LEU 710.0189
LEU 720.0246
ASN 730.0233
ARG 740.0171
THR 750.0202
LYS 760.0227
PRO 770.0169
GLU 780.0155
ALA 790.0141
ALA 800.0116
ALA 810.0163
LYS 820.0167
LYS 830.0159
GLU 840.0143
MET 850.0149
ASN 860.0124
LEU 870.0103
SER 880.0093
VAL 890.0072
GLY 900.0085
LEU 910.0074
GLY 920.0105
GLY 930.0102
GLY 940.0090
SER 950.0056
ASN 960.0058
LEU 970.0044
SER 980.0073
VAL 990.0080
GLY 1000.0113
LEU 1010.0130
GLY 1020.0157
GLU 1030.0183
ILE 1040.0186
GLY 1050.0210
GLY 1060.0229
GLY 1070.0176
SER 1080.0131
LYS 1090.0105
LEU 1100.0052
LEU 1110.0043
ASP 1120.0021
ILE 1130.0012
ASN 1140.0030
LEU 1150.0048
GLY 1160.0071
ARG 1170.0103
GLY 1180.0110
GLY 1190.0129
GLY 1200.0137
SER 1210.0105
MET 1220.0118
VAL 1230.0090
ASP 1240.0117
LEU 1250.0109
THR 1260.0148
PHE 1270.0155
GLY 1280.0189
GLY 1290.0210
VAL 1300.0220
GLY 1310.0185
GLY 1320.0173
GLY 1330.0159
SER 1340.0152
THR 1350.0140
PHE 1360.0122
THR 1370.0098
PHE 1380.0082
PHE 1390.0064
PRO 1400.0079
LEU 1410.0069
VAL 1420.0102
ILE 1430.0101
GLY 1440.0133
GLY 1450.0150
GLY 1460.0149
SER 1470.0119
ASP 1480.0095
ALA 1490.0066
MET 1500.0050
TYR 1510.0021
LEU 1520.0034
GLY 1530.0040
PHE 1540.0073
ALA 1550.0087
ALA 1560.0128
GLY 1570.0136
GLY 1580.0138
GLY 1590.0139
SER 1600.0136
ALA 1610.0172
GLY 1620.0210
GLY 1630.0215
GLU 1640.0207
ASN 1650.0171
HIS 1660.0164
VAL 1670.0138
ALA 1680.0147
PHE 1690.0133
GLY 1700.0167
PRO 1710.0187
GLY 1720.0228
PRO 1730.0234
GLY 1740.0220
VAL 1750.0177
ASP 1760.0190
LEU 1770.0178
THR 1780.0206
PHE 1790.0210
GLY 1800.0250
GLY 1810.0284
VAL 1820.0273
GLN 1830.0258
PHE 1840.0235
ALA 1850.0248
MET 1860.0242
VAL 1870.0298
ASN 1880.0301
ASN 1890.0342
GLY 1900.0359
PRO 1910.0354
GLY 1920.0327
PRO 1930.0307
GLY 1940.0245
GLU 1950.0188
SER 1960.0336
PHE 1970.0220
THR 1980.0323
ALA 1990.0266
GLN 2000.0225
PRO 2010.0220
ALA 2020.0096
ASP 2030.0093
MET 2040.0221
GLN 2050.0264
ALA 2060.0412
GLY 2070.0422
ILE 2080.0300
LYS 2090.0261
GLY 2100.0226
PRO 2110.0097
GLY 2120.0068
PRO 2130.0094
GLY 2140.0106
GLY 2150.0087
SER 2160.0095
ILE 2170.0102
GLN 2180.0086
VAL 2190.0097
ILE 2200.0085
ASN 2210.0076
GLY 2220.0067
SER 2230.0057
THR 2240.0046
ILE 2250.0038
GLY 2260.0033
THR 2270.0037
GLY 2280.0040
SER 2290.0041
LYS 2300.0039
LYS 2310.0034
THR 2320.0031
ILE 2330.0020
LEU 2340.0020
ILE 2350.0042
TYR 2360.0053
SER 2370.0059
ILE 2380.0074
ILE 2390.0062
GLY 2400.0082
VAL 2410.0098
LYS 2420.0095
LYS 2430.0117
GLY 2440.0122
THR 2450.0102
LEU 2460.0088
ALA 2470.0069
TRP 2480.0055
ALA 2490.0035
ARG 2500.0022
THR 2510.0017
GLY 2520.0021
PHE 2530.0025
SER 2540.0035
PRO 2550.0038
ALA 2560.0051
LYS 2570.0060
LYS 2580.0044
LEU 2590.0043
ASN 2600.0035
ALA 2610.0042
GLY 2620.0038
VAL 2630.0052
VAL 2640.0051
ARG 2650.0051
VAL 2660.0043
PHE 2670.0049
PHE 2680.0041
LEU 2690.0050
ASN 2700.0050
GLN 2710.0055
LYS 2720.0049
LYS 2730.0045
ALA 2740.0054
LYS 2750.0055
ASP 2760.0046
VAL 2770.0054
LEU 2780.0066
ARG 2790.0062
LYS 2800.0055
THR 2810.0071
SER 2820.0087
ARG 2830.0080
PRO 2840.0091
MET 2850.0100
VAL 2860.0077
ASP 2870.0060
LEU 2880.0056
THR 2890.0036
PHE 2900.0027
GLY 2910.0025
GLY 2920.0033

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.