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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 24  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0746
THR 260.0078
LYS 270.0069
CYS 280.0057
THR 290.0066
VAL 300.0061
SER 310.0074
HIS 320.0070
GLU 330.0048
VAL 340.0047
ALA 350.0041
ASP 360.0046
CYS 370.0039
SER 380.0039
HIS 390.0042
LEU 400.0046
LYS 410.0039
LEU 420.0035
THR 430.0035
GLN 440.0034
VAL 450.0026
PRO 460.0037
ASP 470.0039
ASP 480.0046
LEU 490.0038
PRO 500.0034
THR 510.0021
ASN 520.0022
ILE 530.0024
THR 540.0025
VAL 550.0028
LEU 560.0021
ASN 570.0025
LEU 580.0018
THR 590.0021
HIS 600.0022
ASN 610.0021
GLN 620.0022
LEU 630.0019
ARG 640.0023
ARG 650.0023
LEU 660.0019
PRO 670.0027
ALA 680.0027
ALA 690.0031
ASN 700.0025
PHE 710.0018
THR 720.0024
ARG 730.0020
TYR 740.0010
SER 750.0011
GLN 760.0011
LEU 770.0013
THR 780.0023
SER 790.0022
LEU 800.0014
ASP 810.0017
VAL 820.0011
GLY 830.0015
PHE 840.0012
ASN 850.0009
THR 860.0012
ILE 870.0014
SER 880.0021
LYS 890.0025
LEU 900.0024
GLU 910.0028
PRO 920.0032
GLU 930.0032
LEU 940.0024
CYS 950.0027
GLN 960.0033
LYS 970.0025
LEU 980.0020
PRO 990.0028
MET 1000.0026
LEU 1010.0024
LYS 1020.0028
VAL 1030.0025
LEU 1040.0022
ASN 1050.0020
LEU 1060.0017
GLN 1070.0017
HIS 1080.0014
ASN 1090.0013
GLU 1100.0016
LEU 1110.0020
SER 1120.0021
GLN 1130.0023
LEU 1140.0025
SER 1150.0028
ASP 1160.0033
LYS 1170.0033
THR 1180.0029
PHE 1190.0030
ALA 1200.0035
PHE 1210.0036
CYS 1220.0032
THR 1230.0037
ASN 1240.0034
LEU 1250.0031
THR 1260.0030
GLU 1270.0028
LEU 1280.0026
HIS 1290.0023
LEU 1300.0022
MET 1310.0020
SER 1320.0019
ASN 1330.0019
SER 1340.0019
ILE 1350.0022
GLN 1360.0020
LYS 1370.0021
ILE 1380.0023
LYS 1390.0025
ASN 1400.0027
ASN 1410.0030
PRO 1420.0029
PHE 1430.0030
VAL 1440.0033
LYS 1450.0035
GLN 1460.0033
LYS 1470.0035
ASN 1480.0035
LEU 1490.0032
ILE 1500.0032
THR 1510.0029
LEU 1520.0027
ASP 1530.0025
LEU 1540.0024
SER 1550.0023
HIS 1560.0021
ASN 1570.0021
GLY 1580.0021
LEU 1590.0021
SER 1600.0021
SER 1610.0019
THR 1620.0021
LYS 1630.0022
LEU 1640.0024
GLY 1650.0025
THR 1660.0025
GLN 1670.0027
VAL 1680.0028
GLN 1690.0029
LEU 1700.0030
GLU 1710.0030
ASN 1720.0032
LEU 1730.0030
GLN 1740.0030
GLU 1750.0028
LEU 1760.0025
LEU 1770.0024
LEU 1780.0022
SER 1790.0022
ASN 1800.0021
ASN 1810.0021
LYS 1820.0020
ILE 1830.0018
GLN 1840.0017
ALA 1850.0017
LEU 1860.0016
LYS 1870.0015
SER 1880.0016
GLU 1890.0015
GLU 1900.0017
LEU 1910.0019
ASP 1920.0019
ILE 1930.0022
PHE 1940.0024
ALA 1950.0023
ASN 1960.0025
SER 1970.0026
SER 1980.0028
LEU 1990.0027
LYS 2000.0030
LYS 2010.0026
LEU 2020.0022
GLU 2030.0022
LEU 2040.0019
SER 2050.0020
SER 2060.0020
ASN 2070.0019
GLN 2080.0017
ILE 2090.0016
LYS 2100.0017
GLU 2110.0017
PHE 2120.0017
SER 2130.0018
PRO 2140.0020
GLY 2150.0020
CYS 2160.0016
PHE 2170.0020
HIS 2180.0021
ALA 2190.0018
ILE 2200.0022
GLY 2210.0021
ARG 2220.0025
LEU 2230.0025
PHE 2240.0029
GLY 2250.0027
LEU 2260.0022
PHE 2270.0022
LEU 2280.0019
ASN 2290.0021
ASN 2300.0020
VAL 2310.0018
GLN 2320.0018
LEU 2330.0018
GLY 2340.0019
PRO 2350.0021
SER 2360.0022
LEU 2370.0020
THR 2380.0022
GLU 2390.0025
LYS 2400.0024
LEU 2410.0022
CYS 2420.0027
LEU 2430.0028
GLU 2440.0025
LEU 2450.0027
ALA 2460.0030
ASN 2470.0033
THR 2480.0030
SER 2490.0032
ILE 2500.0030
ARG 2510.0035
ASN 2520.0032
LEU 2530.0027
SER 2540.0026
LEU 2550.0022
SER 2560.0023
ASN 2570.0021
SER 2580.0020
GLN 2590.0019
LEU 2600.0020
SER 2610.0020
THR 2620.0022
THR 2630.0025
SER 2640.0028
ASN 2650.0033
THR 2660.0033
THR 2670.0029
PHE 2680.0031
LEU 2690.0036
GLY 2700.0035
LEU 2710.0035
LYS 2720.0041
TRP 2730.0041
THR 2740.0039
ASN 2750.0042
LEU 2760.0039
THR 2770.0041
MET 2780.0037
LEU 2790.0032
ASP 2800.0029
LEU 2810.0025
SER 2820.0025
TYR 2830.0023
ASN 2840.0021
ASN 2850.0021
LEU 2860.0021
ASN 2870.0021
VAL 2880.0022
VAL 2890.0025
GLY 2900.0028
ASN 2910.0031
ASP 2920.0035
SER 2930.0032
PHE 2940.0035
ALA 2950.0039
TRP 2960.0041
LEU 2970.0041
PRO 2980.0046
GLN 2990.0046
LEU 3000.0041
GLU 3010.0042
TYR 3020.0039
PHE 3030.0035
PHE 3040.0031
LEU 3050.0028
GLU 3060.0028
TYR 3070.0026
ASN 3080.0023
ASN 3090.0022
ILE 3100.0022
GLN 3110.0023
HIS 3120.0023
LEU 3130.0025
PHE 3140.0027
SER 3150.0030
HIS 3160.0032
SER 3170.0030
LEU 3180.0033
HIS 3190.0037
GLY 3200.0041
LEU 3210.0041
PHE 3220.0044
ASN 3230.0046
VAL 3240.0042
ARG 3250.0044
TYR 3260.0040
LEU 3270.0036
ASN 3280.0034
LEU 3290.0031
LYS 3300.0031
ARG 3310.0029
SER 3320.0026
PHE 3330.0025
THR 3340.0024
LYS 3350.0028
GLN 3360.0031
SER 3370.0031
ILE 3380.0035
SER 3390.0034
LEU 3400.0028
ALA 3410.0028
SER 3420.0026
LEU 3430.0027
PRO 3440.0026
LYS 3450.0026
ILE 3460.0028
ASP 3470.0028
ASP 3480.0029
PHE 3490.0031
SER 3500.0031
PHE 3510.0034
GLN 3520.0037
TRP 3530.0039
LEU 3540.0040
LYS 3550.0044
CYS 3560.0045
LEU 3570.0042
GLU 3580.0044
HIS 3590.0042
LEU 3600.0038
ASN 3610.0035
MET 3620.0033
GLU 3630.0034
ASP 3640.0033
ASN 3650.0032
ASP 3660.0033
ILE 3670.0033
PRO 3680.0035
GLY 3690.0036
ILE 3700.0036
LYS 3710.0034
SER 3720.0035
ASN 3730.0034
MET 3740.0033
PHE 3750.0035
THR 3760.0036
GLY 3770.0038
LEU 3780.0039
ILE 3790.0042
ASN 3800.0044
LEU 3810.0040
LYS 3820.0042
TYR 3830.0041
LEU 3840.0038
SER 3850.0037
LEU 3860.0035
SER 3870.0035
ASN 3880.0035
SER 3890.0034
PHE 3900.0036
THR 3910.0039
SER 3920.0041
LEU 3930.0040
ARG 3940.0044
THR 3950.0046
LEU 3960.0044
THR 3970.0047
ASN 3980.0048
GLU 3990.0045
THR 4000.0041
PHE 4010.0039
VAL 4020.0039
SER 4030.0037
LEU 4040.0037
ALA 4050.0039
HIS 4060.0038
SER 4070.0038
PRO 4080.0041
LEU 4090.0040
HIS 4100.0042
ILE 4110.0039
LEU 4120.0037
ASN 4130.0035
LEU 4140.0035
THR 4150.0035
LYS 4160.0034
ASN 4170.0037
LYS 4180.0039
ILE 4190.0040
SER 4200.0044
LYS 4210.0047
ILE 4220.0046
GLU 4230.0051
SER 4240.0054
ASP 4250.0051
ALA 4260.0045
PHE 4270.0043
SER 4280.0046
TRP 4290.0043
LEU 4300.0042
GLY 4310.0044
HIS 4320.0042
LEU 4330.0040
GLU 4340.0043
VAL 4350.0041
LEU 4360.0037
ASP 4370.0034
LEU 4380.0034
GLY 4390.0033
LEU 4400.0032
ASN 4410.0035
GLU 4420.0039
ILE 4430.0041
GLY 4440.0045
GLN 4450.0049
GLU 4460.0053
LEU 4470.0052
THR 4480.0058
GLY 4490.0056
GLN 4500.0057
GLU 4510.0051
TRP 4520.0050
ARG 4530.0054
GLY 4540.0052
LEU 4550.0049
GLU 4560.0057
ASN 4570.0051
ILE 4580.0045
PHE 4590.0046
GLU 4600.0040
ILE 4610.0038
TYR 4620.0034
LEU 4630.0033
SER 4640.0031
TYR 4650.0029
ASN 4660.0034
LYS 4670.0038
TYR 4680.0042
LEU 4690.0044
GLN 4700.0050
LEU 4710.0052
THR 4720.0059
ARG 4730.0064
ASN 4740.0063
SER 4750.0056
PHE 4760.0055
ALA 4770.0063
LEU 4780.0060
VAL 4790.0056
PRO 4800.0062
SER 4810.0060
LEU 4820.0053
GLN 4830.0054
ARG 4840.0047
LEU 4850.0043
MET 4860.0038
LEU 4870.0037
ARG 4880.0032
ARG 4890.0030
VAL 4900.0033
ALA 4910.0037
LEU 4920.0041
LYS 4930.0047
ASN 4940.0054
VAL 4950.0053
ASP 4960.0057
SER 4970.0062
SER 4980.0069
PRO 4990.0070
SER 5000.0062
PRO 5010.0057
PHE 5020.0056
GLN 5030.0064
PRO 5040.0065
LEU 5050.0060
ARG 5060.0063
ASN 5070.0062
LEU 5080.0057
THR 5090.0054
ILE 5100.0050
LEU 5110.0046
ASP 5120.0040
LEU 5130.0039
SER 5140.0034
ASN 5150.0030
ASN 5160.0035
ASN 5170.0036
ILE 5180.0042
ALA 5190.0045
ASN 5200.0050
ILE 5210.0052
ASN 5220.0058
ASP 5230.0062
ASP 5240.0064
MET 5250.0058
LEU 5260.0057
GLU 5270.0064
GLY 5280.0068
LEU 5290.0062
GLU 5300.0066
LYS 5310.0063
LEU 5320.0058
GLU 5330.0056
ILE 5340.0050
LEU 5350.0048
ASP 5360.0042
LEU 5370.0040
GLN 5380.0033
HIS 5390.0028
ASN 5400.0034
ASN 5410.0038
LEU 5420.0042
ALA 5430.0041
ARG 5440.0046
LEU 5450.0050
TRP 5460.0048
LYS 5470.0048
HIS 5480.0053
ALA 5490.0055
ASN 5500.0057
PRO 5510.0063
GLY 5520.0067
GLY 5530.0062
PRO 5540.0057
ILE 5550.0057
TYR 5560.0058
PHE 5570.0057
LEU 5580.0056
LYS 5590.0063
GLY 5600.0067
LEU 5610.0061
SER 5620.0065
HIS 5630.0063
LEU 5640.0057
HIS 5650.0054
ILE 5660.0050
LEU 5670.0046
ASN 5680.0040
LEU 5690.0037
GLU 5700.0030
SER 5710.0027
ASN 5720.0033
GLY 5730.0031
PHE 5740.0036
ASP 5750.0036
GLU 5760.0040
ILE 5770.0043
PRO 5780.0050
VAL 5790.0052
GLU 5800.0057
VAL 5810.0052
PHE 5820.0052
LYS 5830.0059
ASP 5840.0062
LEU 5850.0058
PHE 5860.0057
GLU 5870.0058
LEU 5880.0054
LYS 5890.0052
ILE 5900.0048
ILE 5910.0043
ASP 5920.0037
LEU 5930.0033
GLY 5940.0027
LEU 5950.0022
ASN 5960.0027
ASN 5970.0028
LEU 5980.0030
ASN 5990.0029
THR 6000.0035
LEU 6010.0038
PRO 6020.0044
ALA 6030.0046
SER 6040.0049
VAL 6050.0048
PHE 6060.0047
ASN 6070.0052
ASN 6080.0056
GLN 6090.0052
VAL 6100.0056
SER 6110.0057
LEU 6120.0050
LYS 6130.0049
SER 6140.0044
LEU 6150.0038
ASN 6160.0033
LEU 6170.0027
GLN 6180.0024
LYS 6190.0020
ASN 6200.0021
LEU 6210.0024
ILE 6220.0025
THR 6230.0027
SER 6240.0028
VAL 6250.0025
GLU 6260.0032
LYS 6270.0034
LYS 6280.0042
VAL 6290.0040
PHE 6300.0035
GLY 6310.0039
PRO 6320.0046
ALA 6330.0042
PHE 6340.0038
ARG 6350.0044
ASN 6360.0047
LEU 6370.0044
THR 6380.0049
GLU 6390.0044
LEU 6400.0036
ASP 6410.0032
MET 6420.0024
ARG 6430.0026
PHE 6440.0025
ASN 6450.0021
PRO 6460.0027
PHE 6470.0027
ASP 6480.0034
CYS 6490.0037
THR 6500.0040
CYS 6510.0037
GLU 6520.0038
SER 6530.0032
ILE 6540.0026
ALA 6550.0026
TRP 6560.0024
PHE 6570.0023
VAL 6580.0025
ASN 6590.0024
TRP 6600.0027
ILE 6610.0030
ASN 6620.0034
GLU 6630.0035
THR 6640.0040
HIS 6650.0051
THR 6660.0043
ASN 6670.0047
ILE 6680.0040
PRO 6690.0045
GLU 6700.0045
LEU 6710.0040
SER 6720.0046
SER 6730.0047
HIS 6740.0037
TYR 6750.0032
LEU 6760.0036
CYS 6770.0037
ASN 6780.0040
THR 6790.0044
PRO 6800.0052
PRO 6810.0061
HIS 6820.0063
TYR 6830.0053
HIS 6840.0053
GLY 6850.0051
PHE 6860.0049
PRO 6870.0043
VAL 6880.0034
ARG 6890.0037
LEU 6900.0044
PHE 6910.0040
ASP 6920.0042
THR 6930.0034
SER 6940.0039
SER 6950.0046
CYS 6960.0040
GLU 10.0029
ALA 20.0033
ALA 30.0033
ALA 40.0027
LYS 50.0027
MET 60.0032
GLN 70.0030
ARG 80.0025
LEU 90.0028
VAL 100.0033
LEU 110.0029
LEU 120.0026
LEU 130.0031
ALA 140.0034
ILE 150.0031
SER 160.0031
LEU 170.0038
LEU 180.0040
LEU 190.0036
TYR 200.0039
GLN 210.0045
ASP 220.0045
LEU 230.0042
PRO 240.0047
VAL 250.0048
ARG 260.0048
SER 270.0039
GLU 280.0029
PHE 290.0027
GLU 300.0052
LEU 310.0079
ASP 320.0070
ARG 330.0084
ILE 340.0106
CYS 350.0115
GLY 360.0127
TYR 370.0145
GLY 380.0143
THR 390.0150
ALA 400.0127
ARG 410.0109
CYS 420.0091
ARG 430.0087
LYS 440.0074
LYS 450.0081
CYS 460.0097
ARG 470.0111
SER 480.0119
GLN 490.0130
GLU 500.0118
TYR 510.0107
ARG 520.0091
ILE 530.0098
GLY 540.0085
ARG 550.0073
CYS 560.0076
PRO 570.0068
ASN 580.0056
THR 590.0053
TYR 600.0063
ALA 610.0077
CYS 620.0093
CYS 630.0104
LEU 640.0120
ARG 650.0132
LYS 660.0150
TRP 670.0140
ASP 680.0132
GLU 690.0132
SER 700.0119
LEU 710.0111
LEU 720.0114
ASN 730.0102
ARG 740.0080
THR 750.0080
LYS 760.0063
PRO 770.0025
GLU 780.0048
ALA 790.0048
ALA 800.0045
ALA 810.0058
LYS 820.0060
LYS 830.0049
GLU 840.0063
MET 850.0052
ASN 860.0072
LEU 870.0066
SER 880.0086
VAL 890.0090
GLY 900.0112
LEU 910.0122
GLY 920.0143
GLY 930.0159
GLY 940.0153
SER 950.0134
ASN 960.0120
LEU 970.0099
SER 980.0090
VAL 990.0068
GLY 1000.0069
LEU 1010.0053
GLY 1020.0075
GLU 1030.0075
ILE 1040.0093
GLY 1050.0112
GLY 1060.0117
GLY 1070.0074
SER 1080.0065
LYS 1090.0040
LEU 1100.0069
LEU 1110.0056
ASP 1120.0064
ILE 1130.0069
ASN 1140.0081
LEU 1150.0090
GLY 1160.0093
ARG 1170.0103
GLY 1180.0121
GLY 1190.0134
GLY 1200.0146
SER 1210.0127
MET 1220.0118
VAL 1230.0104
ASP 1240.0096
LEU 1250.0081
THR 1260.0076
PHE 1270.0060
GLY 1280.0058
GLY 1290.0046
VAL 1300.0036
GLY 1310.0043
GLY 1320.0047
GLY 1330.0046
SER 1340.0040
THR 1350.0040
PHE 1360.0040
THR 1370.0046
PHE 1380.0056
PHE 1390.0065
PRO 1400.0076
LEU 1410.0068
VAL 1420.0073
ILE 1430.0079
GLY 1440.0096
GLY 1450.0104
GLY 1460.0095
SER 1470.0095
ASP 1480.0087
ALA 1490.0086
MET 1500.0075
TYR 1510.0072
LEU 1520.0065
GLY 1530.0055
PHE 1540.0047
ALA 1550.0039
ALA 1560.0046
GLY 1570.0048
GLY 1580.0051
GLY 1590.0052
SER 1600.0050
ALA 1610.0050
GLY 1620.0044
GLY 1630.0052
GLU 1640.0060
ASN 1650.0066
HIS 1660.0080
VAL 1670.0086
ALA 1680.0099
PHE 1690.0107
GLY 1700.0120
PRO 1710.0126
GLY 1720.0125
PRO 1730.0123
GLY 1740.0113
VAL 1750.0105
ASP 1760.0102
LEU 1770.0088
THR 1780.0083
PHE 1790.0070
GLY 1800.0064
GLY 1810.0079
VAL 1820.0084
GLN 1830.0095
PHE 1840.0097
ALA 1850.0111
MET 1860.0115
VAL 1870.0114
ASN 1880.0104
ASN 1890.0104
GLY 1900.0096
PRO 1910.0113
GLY 1920.0194
PRO 1930.0270
GLY 1940.0298
GLU 1950.0210
SER 1960.0240
PHE 1970.0183
THR 1980.0333
ALA 1990.0385
GLN 2000.0384
PRO 2010.0518
ALA 2020.0345
ASP 2030.0049
MET 2040.0366
GLN 2050.0279
ALA 2060.0555
GLY 2070.0624
ILE 2080.0450
LYS 2090.0446
GLY 2100.0407
PRO 2110.0180
GLY 2120.0141
PRO 2130.0035
GLY 2140.0097
GLY 2150.0090
SER 2160.0258
ILE 2170.0230
GLN 2180.0285
VAL 2190.0260
ILE 2200.0321
ASN 2210.0438
GLY 2220.0425
SER 2230.0407
THR 2240.0426
ILE 2250.0448
GLY 2260.0617
THR 2270.0746
GLY 2280.0729
SER 2290.0742
LYS 2300.0564
LYS 2310.0481
THR 2320.0410
ILE 2330.0411
LEU 2340.0369
ILE 2350.0380
TYR 2360.0380
SER 2370.0330
ILE 2380.0366
ILE 2390.0306
GLY 2400.0372
VAL 2410.0447
LYS 2420.0421
LYS 2430.0446
GLY 2440.0427
THR 2450.0389
LEU 2460.0402
ALA 2470.0304
TRP 2480.0302
ALA 2490.0224
ARG 2500.0272
THR 2510.0274
GLY 2520.0310
PHE 2530.0275
SER 2540.0302
PRO 2550.0293
ALA 2560.0255
LYS 2570.0246
LYS 2580.0272
LEU 2590.0304
ASN 2600.0409
ALA 2610.0399
GLY 2620.0303
VAL 2630.0293
VAL 2640.0204
ARG 2650.0223
VAL 2660.0216
PHE 2670.0189
PHE 2680.0166
LEU 2690.0165
ASN 2700.0227
GLN 2710.0235
LYS 2720.0252
LYS 2730.0196
ALA 2740.0145
LYS 2750.0157
ASP 2760.0157
VAL 2770.0124
LEU 2780.0048
ARG 2790.0077
LYS 2800.0150
THR 2810.0172
SER 2820.0170
ARG 2830.0176
PRO 2840.0182
MET 2850.0165
VAL 2860.0213
ASP 2870.0158
LEU 2880.0053
THR 2890.0107
PHE 2900.0089
GLY 2910.0192
GLY 2920.0291

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.