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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0973
THR 260.0054
LYS 270.0048
CYS 280.0041
THR 290.0038
VAL 300.0038
SER 310.0042
HIS 320.0047
GLU 330.0052
VAL 340.0050
ALA 350.0045
ASP 360.0045
CYS 370.0046
SER 380.0044
HIS 390.0043
LEU 400.0045
LYS 410.0054
LEU 420.0057
THR 430.0059
GLN 440.0062
VAL 450.0060
PRO 460.0071
ASP 470.0079
ASP 480.0085
LEU 490.0076
PRO 500.0081
THR 510.0084
ASN 520.0080
ILE 530.0069
THR 540.0065
VAL 550.0055
LEU 560.0054
ASN 570.0050
LEU 580.0050
THR 590.0047
HIS 600.0047
ASN 610.0050
GLN 620.0052
LEU 630.0048
ARG 640.0046
ARG 650.0041
LEU 660.0044
PRO 670.0050
ALA 680.0049
ALA 690.0062
ASN 700.0065
PHE 710.0063
THR 720.0073
ARG 730.0080
TYR 740.0070
SER 750.0072
GLN 760.0073
LEU 770.0062
THR 780.0057
SER 790.0048
LEU 800.0043
ASP 810.0040
VAL 820.0040
GLY 830.0036
PHE 840.0039
ASN 850.0043
THR 860.0043
ILE 870.0036
SER 880.0034
LYS 890.0028
LEU 900.0023
GLU 910.0025
PRO 920.0017
GLU 930.0028
LEU 940.0034
CYS 950.0032
GLN 960.0041
LYS 970.0049
LEU 980.0049
PRO 990.0052
MET 1000.0056
LEU 1010.0041
LYS 1020.0043
VAL 1030.0037
LEU 1040.0026
ASN 1050.0023
LEU 1060.0020
GLN 1070.0020
HIS 1080.0026
ASN 1090.0031
GLU 1100.0034
LEU 1110.0028
SER 1120.0034
GLN 1130.0037
LEU 1140.0030
SER 1150.0035
ASP 1160.0037
LYS 1170.0026
THR 1180.0017
PHE 1190.0020
ALA 1200.0028
PHE 1210.0024
CYS 1220.0027
THR 1230.0039
ASN 1240.0043
LEU 1250.0035
THR 1260.0043
GLU 1270.0034
LEU 1280.0023
HIS 1290.0017
LEU 1300.0012
MET 1310.0014
SER 1320.0020
ASN 1330.0023
SER 1340.0033
ILE 1350.0033
GLN 1360.0044
LYS 1370.0049
ILE 1380.0047
LYS 1390.0057
ASN 1400.0062
ASN 1410.0055
PRO 1420.0041
PHE 1430.0043
VAL 1440.0054
LYS 1450.0048
GLN 1460.0044
LYS 1470.0056
ASN 1480.0054
LEU 1490.0045
ILE 1500.0049
THR 1510.0040
LEU 1520.0033
ASP 1530.0025
LEU 1540.0024
SER 1550.0020
HIS 1560.0019
ASN 1570.0026
GLY 1580.0034
LEU 1590.0038
SER 1600.0045
SER 1610.0050
THR 1620.0049
LYS 1630.0057
LEU 1640.0054
GLY 1650.0063
THR 1660.0074
GLN 1670.0077
VAL 1680.0076
GLN 1690.0067
LEU 1700.0059
GLU 1710.0067
ASN 1720.0063
LEU 1730.0055
GLN 1740.0054
GLU 1750.0044
LEU 1760.0041
LEU 1770.0033
LEU 1780.0033
SER 1790.0026
ASN 1800.0024
ASN 1810.0030
LYS 1820.0034
ILE 1830.0036
GLN 1840.0038
ALA 1850.0041
LEU 1860.0044
LYS 1870.0053
SER 1880.0059
GLU 1890.0067
GLU 1900.0061
LEU 1910.0060
ASP 1920.0069
ILE 1930.0068
PHE 1940.0064
ALA 1950.0073
ASN 1960.0074
SER 1970.0066
SER 1980.0062
LEU 1990.0054
LYS 2000.0050
LYS 2010.0042
LEU 2020.0041
GLU 2030.0035
LEU 2040.0035
SER 2050.0029
SER 2060.0030
ASN 2070.0033
GLN 2080.0032
ILE 2090.0032
LYS 2100.0032
GLU 2110.0034
PHE 2120.0034
SER 2130.0042
PRO 2140.0043
GLY 2150.0048
CYS 2160.0048
PHE 2170.0045
HIS 2180.0051
ALA 2190.0058
ILE 2200.0059
GLY 2210.0062
ARG 2220.0056
LEU 2230.0049
PHE 2240.0046
GLY 2250.0040
LEU 2260.0034
PHE 2270.0033
LEU 2280.0031
ASN 2290.0031
ASN 2300.0034
VAL 2310.0037
GLN 2320.0040
LEU 2330.0034
GLY 2340.0037
PRO 2350.0036
SER 2360.0037
LEU 2370.0031
THR 2380.0026
GLU 2390.0028
LYS 2400.0025
LEU 2410.0023
CYS 2420.0021
LEU 2430.0021
GLU 2440.0025
LEU 2450.0029
ALA 2460.0024
ASN 2470.0030
THR 2480.0034
SER 2490.0040
ILE 2500.0034
ARG 2510.0035
ASN 2520.0033
LEU 2530.0025
SER 2540.0026
LEU 2550.0024
SER 2560.0029
ASN 2570.0038
SER 2580.0036
GLN 2590.0044
LEU 2600.0039
SER 2610.0055
THR 2620.0054
THR 2630.0047
SER 2640.0057
ASN 2650.0062
THR 2660.0049
THR 2670.0039
PHE 2680.0033
LEU 2690.0041
GLY 2700.0033
LEU 2710.0029
LYS 2720.0039
TRP 2730.0037
THR 2740.0035
ASN 2750.0043
LEU 2760.0034
THR 2770.0041
MET 2780.0033
LEU 2790.0020
ASP 2800.0020
LEU 2810.0018
SER 2820.0026
TYR 2830.0040
ASN 2840.0040
ASN 2850.0050
LEU 2860.0047
ASN 2870.0058
VAL 2880.0061
VAL 2890.0052
GLY 2900.0065
ASN 2910.0071
ASP 2920.0068
SER 2930.0054
PHE 2940.0046
ALA 2950.0063
TRP 2960.0053
LEU 2970.0047
PRO 2980.0060
GLN 2990.0058
LEU 3000.0046
GLU 3010.0053
TYR 3020.0042
PHE 3030.0027
PHE 3040.0021
LEU 3050.0014
GLU 3060.0024
TYR 3070.0038
ASN 3080.0039
ASN 3090.0051
ILE 3100.0046
GLN 3110.0060
HIS 3120.0059
LEU 3130.0049
PHE 3140.0063
SER 3150.0067
HIS 3160.0072
SER 3170.0056
LEU 3180.0049
HIS 3190.0066
GLY 3200.0071
LEU 3210.0058
PHE 3220.0073
ASN 3230.0072
VAL 3240.0056
ARG 3250.0062
TYR 3260.0049
LEU 3270.0032
ASN 3280.0026
LEU 3290.0014
LYS 3300.0028
ARG 3310.0036
SER 3320.0026
PHE 3330.0036
THR 3340.0055
LYS 3350.0065
GLN 3360.0082
SER 3370.0105
ILE 3380.0116
SER 3390.0137
LEU 3400.0128
ALA 3410.0100
SER 3420.0089
LEU 3430.0068
PRO 3440.0052
LYS 3450.0053
ILE 3460.0042
ASP 3470.0055
ASP 3480.0058
PHE 3490.0061
SER 3500.0051
PHE 3510.0048
GLN 3520.0067
TRP 3530.0070
LEU 3540.0062
LYS 3550.0079
CYS 3560.0079
LEU 3570.0064
GLU 3580.0069
HIS 3590.0058
LEU 3600.0041
ASN 3610.0034
MET 3620.0022
GLU 3630.0035
ASP 3640.0042
ASN 3650.0034
ASP 3660.0038
ILE 3670.0025
PRO 3680.0029
GLY 3690.0016
ILE 3700.0013
LYS 3710.0029
SER 3720.0037
ASN 3730.0046
MET 3740.0034
PHE 3750.0039
THR 3760.0056
GLY 3770.0068
LEU 3780.0063
ILE 3790.0080
ASN 3800.0081
LEU 3810.0065
LYS 3820.0071
TYR 3830.0063
LEU 3840.0048
SER 3850.0045
LEU 3860.0034
SER 3870.0044
ASN 3880.0042
SER 3890.0027
PHE 3900.0026
THR 3910.0033
SER 3920.0032
LEU 3930.0026
ARG 3940.0031
THR 3950.0026
LEU 3960.0027
THR 3970.0024
ASN 3980.0023
GLU 3990.0022
THR 4000.0023
PHE 4010.0029
VAL 4020.0034
SER 4030.0039
LEU 4040.0044
ALA 4050.0051
HIS 4060.0063
SER 4070.0061
PRO 4080.0072
LEU 4090.0063
HIS 4100.0072
ILE 4110.0064
LEU 4120.0054
ASN 4130.0053
LEU 4140.0045
THR 4150.0052
LYS 4160.0045
ASN 4170.0038
LYS 4180.0041
ILE 4190.0038
SER 4200.0039
LYS 4210.0037
ILE 4220.0036
GLU 4230.0033
SER 4240.0034
ASP 4250.0034
ALA 4260.0031
PHE 4270.0038
SER 4280.0039
TRP 4290.0040
LEU 4300.0048
GLY 4310.0051
HIS 4320.0060
LEU 4330.0057
GLU 4340.0066
VAL 4350.0065
LEU 4360.0057
ASP 4370.0058
LEU 4380.0053
GLY 4390.0058
LEU 4400.0059
ASN 4410.0050
GLU 4420.0048
ILE 4430.0046
GLY 4440.0046
GLN 4450.0044
GLU 4460.0045
LEU 4470.0045
THR 4480.0044
GLY 4490.0044
GLN 4500.0043
GLU 4510.0041
TRP 4520.0045
ARG 4530.0042
GLY 4540.0044
LEU 4550.0048
GLU 4560.0049
ASN 4570.0055
ILE 4580.0056
PHE 4590.0063
GLU 4600.0063
ILE 4610.0057
TYR 4620.0060
LEU 4630.0057
SER 4640.0062
TYR 4650.0063
ASN 4660.0053
LYS 4670.0052
TYR 4680.0050
LEU 4690.0048
GLN 4700.0046
LEU 4710.0047
THR 4720.0046
ARG 4730.0045
ASN 4740.0045
SER 4750.0046
PHE 4760.0047
ALA 4770.0045
LEU 4780.0047
VAL 4790.0048
PRO 4800.0047
SER 4810.0052
LEU 4820.0054
GLN 4830.0056
ARG 4840.0059
LEU 4850.0058
MET 4860.0058
LEU 4870.0057
ARG 4880.0062
ARG 4890.0064
VAL 4900.0059
ALA 4910.0055
LEU 4920.0052
LYS 4930.0049
ASN 4940.0047
VAL 4950.0048
ASP 4960.0041
SER 4970.0041
SER 4980.0040
PRO 4990.0040
SER 5000.0040
PRO 5010.0044
PHE 5020.0044
GLN 5030.0041
PRO 5040.0043
LEU 5050.0044
ARG 5060.0037
ASN 5070.0044
LEU 5080.0045
THR 5090.0046
ILE 5100.0054
LEU 5110.0051
ASP 5120.0055
LEU 5130.0055
SER 5140.0060
ASN 5150.0064
ASN 5160.0064
ASN 5170.0063
ILE 5180.0056
ALA 5190.0054
ASN 5200.0048
ILE 5210.0043
ASN 5220.0039
ASP 5230.0036
ASP 5240.0034
MET 5250.0037
LEU 5260.0034
GLU 5270.0032
GLY 5280.0034
LEU 5290.0034
GLU 5300.0034
LYS 5310.0034
LEU 5320.0037
GLU 5330.0040
ILE 5340.0046
LEU 5350.0048
ASP 5360.0051
LEU 5370.0052
GLN 5380.0056
HIS 5390.0061
ASN 5400.0060
ASN 5410.0063
LEU 5420.0055
ALA 5430.0056
ARG 5440.0059
LEU 5450.0052
TRP 5460.0049
LYS 5470.0054
HIS 5480.0054
ALA 5490.0061
ASN 5500.0060
PRO 5510.0063
GLY 5520.0056
GLY 5530.0050
PRO 5540.0045
ILE 5550.0043
TYR 5560.0039
PHE 5570.0040
LEU 5580.0037
LYS 5590.0034
GLY 5600.0033
LEU 5610.0034
SER 5620.0033
HIS 5630.0033
LEU 5640.0035
HIS 5650.0035
ILE 5660.0043
LEU 5670.0044
ASN 5680.0048
LEU 5690.0049
GLU 5700.0052
SER 5710.0057
ASN 5720.0058
GLY 5730.0058
PHE 5740.0051
ASP 5750.0051
GLU 5760.0046
ILE 5770.0041
PRO 5780.0040
VAL 5790.0035
GLU 5800.0033
VAL 5810.0037
PHE 5820.0034
LYS 5830.0033
ASP 5840.0032
LEU 5850.0032
PHE 5860.0032
GLU 5870.0033
LEU 5880.0036
LYS 5890.0036
ILE 5900.0040
ILE 5910.0040
ASP 5920.0044
LEU 5930.0044
GLY 5940.0046
LEU 5950.0050
ASN 5960.0048
ASN 5970.0044
LEU 5980.0037
ASN 5990.0030
THR 6000.0032
LEU 6010.0028
PRO 6020.0029
ALA 6030.0024
SER 6040.0023
VAL 6050.0028
PHE 6060.0027
ASN 6070.0025
ASN 6080.0027
GLN 6090.0028
VAL 6100.0026
SER 6110.0032
LEU 6120.0032
LYS 6130.0035
SER 6140.0038
LEU 6150.0034
ASN 6160.0041
LEU 6170.0034
GLN 6180.0037
LYS 6190.0036
ASN 6200.0031
LEU 6210.0023
ILE 6220.0015
THR 6230.0009
SER 6240.0015
VAL 6250.0009
GLU 6260.0009
LYS 6270.0008
LYS 6280.0016
VAL 6290.0015
PHE 6300.0011
GLY 6310.0008
PRO 6320.0015
ALA 6330.0020
PHE 6340.0019
ARG 6350.0019
ASN 6360.0025
LEU 6370.0030
THR 6380.0040
GLU 6390.0042
LEU 6400.0035
ASP 6410.0041
MET 6420.0029
ARG 6430.0038
PHE 6440.0034
ASN 6450.0020
PRO 6460.0015
PHE 6470.0018
ASP 6480.0027
CYS 6490.0042
THR 6500.0052
CYS 6510.0056
GLU 6520.0049
SER 6530.0032
ILE 6540.0031
ALA 6550.0043
TRP 6560.0028
PHE 6570.0025
VAL 6580.0039
ASN 6590.0039
TRP 6600.0031
ILE 6610.0040
ASN 6620.0041
GLU 6630.0033
THR 6640.0033
HIS 6650.0035
THR 6660.0036
ASN 6670.0050
ILE 6680.0049
PRO 6690.0063
GLU 6700.0068
LEU 6710.0059
SER 6720.0069
SER 6730.0070
HIS 6740.0055
TYR 6750.0044
LEU 6760.0046
CYS 6770.0040
ASN 6780.0032
THR 6790.0033
PRO 6800.0051
PRO 6810.0060
HIS 6820.0075
TYR 6830.0064
HIS 6840.0056
GLY 6850.0062
PHE 6860.0068
PRO 6870.0063
VAL 6880.0050
ARG 6890.0057
LEU 6900.0071
PHE 6910.0067
ASP 6920.0079
THR 6930.0072
SER 6940.0090
SER 6950.0093
CYS 6960.0080
GLU 10.0150
ALA 20.0155
ALA 30.0153
ALA 40.0126
LYS 50.0118
MET 60.0126
GLN 70.0115
ARG 80.0094
LEU 90.0100
VAL 100.0110
LEU 110.0083
LEU 120.0074
LEU 130.0088
ALA 140.0090
ILE 150.0073
SER 160.0066
LEU 170.0074
LEU 180.0079
LEU 190.0068
TYR 200.0064
GLN 210.0065
ASP 220.0075
LEU 230.0064
PRO 240.0062
VAL 250.0047
ARG 260.0075
SER 270.0049
GLU 280.0059
PHE 290.0039
GLU 300.0022
LEU 310.0054
ASP 320.0050
ARG 330.0043
ILE 340.0075
CYS 350.0099
GLY 360.0134
TYR 370.0164
GLY 380.0143
THR 390.0149
ALA 400.0107
ARG 410.0071
CYS 420.0054
ARG 430.0042
LYS 440.0031
LYS 450.0032
CYS 460.0046
ARG 470.0067
SER 480.0085
GLN 490.0105
GLU 500.0088
TYR 510.0072
ARG 520.0061
ILE 530.0082
GLY 540.0078
ARG 550.0070
CYS 560.0064
PRO 570.0068
ASN 580.0053
THR 590.0054
TYR 600.0043
ALA 610.0046
CYS 620.0069
CYS 630.0072
LEU 640.0098
ARG 650.0109
LYS 660.0148
TRP 670.0157
ASP 680.0141
GLU 690.0200
SER 700.0163
LEU 710.0128
LEU 720.0204
ASN 730.0203
ARG 740.0123
THR 750.0157
LYS 760.0190
PRO 770.0115
GLU 780.0102
ALA 790.0077
ALA 800.0108
ALA 810.0151
LYS 820.0124
LYS 830.0117
GLU 840.0112
MET 850.0093
ASN 860.0109
LEU 870.0087
SER 880.0100
VAL 890.0081
GLY 900.0099
LEU 910.0085
GLY 920.0107
GLY 930.0131
GLY 940.0160
SER 950.0133
ASN 960.0123
LEU 970.0099
SER 980.0111
VAL 990.0090
GLY 1000.0106
LEU 1010.0084
GLY 1020.0100
GLU 1030.0071
ILE 1040.0105
GLY 1050.0117
GLY 1060.0188
GLY 1070.0161
SER 1080.0142
LYS 1090.0082
LEU 1100.0078
LEU 1110.0077
ASP 1120.0090
ILE 1130.0083
ASN 1140.0106
LEU 1150.0090
GLY 1160.0113
ARG 1170.0127
GLY 1180.0086
GLY 1190.0102
GLY 1200.0113
SER 1210.0081
MET 1220.0088
VAL 1230.0079
ASP 1240.0088
LEU 1250.0084
THR 1260.0092
PHE 1270.0084
GLY 1280.0091
GLY 1290.0093
VAL 1300.0083
GLY 1310.0058
GLY 1320.0056
GLY 1330.0058
SER 1340.0055
THR 1350.0057
PHE 1360.0067
THR 1370.0062
PHE 1380.0054
PHE 1390.0050
PRO 1400.0044
LEU 1410.0021
VAL 1420.0048
ILE 1430.0061
GLY 1440.0078
GLY 1450.0122
GLY 1460.0151
SER 1470.0142
ASP 1480.0132
ALA 1490.0112
MET 1500.0084
TYR 1510.0070
LEU 1520.0065
GLY 1530.0064
PHE 1540.0067
ALA 1550.0071
ALA 1560.0066
GLY 1570.0057
GLY 1580.0045
GLY 1590.0039
SER 1600.0034
ALA 1610.0066
GLY 1620.0069
GLY 1630.0086
GLU 1640.0089
ASN 1650.0091
HIS 1660.0092
VAL 1670.0088
ALA 1680.0091
PHE 1690.0089
GLY 1700.0096
PRO 1710.0101
GLY 1720.0085
PRO 1730.0083
GLY 1740.0078
VAL 1750.0087
ASP 1760.0084
LEU 1770.0089
THR 1780.0090
PHE 1790.0094
GLY 1800.0096
GLY 1810.0084
VAL 1820.0081
GLN 1830.0073
PHE 1840.0077
ALA 1850.0067
MET 1860.0091
VAL 1870.0124
ASN 1880.0156
ASN 1890.0250
GLY 1900.0264
PRO 1910.0233
GLY 1920.0246
PRO 1930.0172
GLY 1940.0081
GLU 1950.0065
SER 1960.0239
PHE 1970.0218
THR 1980.0145
ALA 1990.0129
GLN 2000.0182
PRO 2010.0148
ALA 2020.0211
ASP 2030.0191
MET 2040.0156
GLN 2050.0152
ALA 2060.0139
GLY 2070.0139
ILE 2080.0074
LYS 2090.0106
GLY 2100.0174
PRO 2110.0161
GLY 2120.0091
PRO 2130.0080
GLY 2140.0127
GLY 2150.0188
SER 2160.0310
ILE 2170.0303
GLN 2180.0389
VAL 2190.0379
ILE 2200.0462
ASN 2210.0404
GLY 2220.0391
SER 2230.0347
THR 2240.0335
ILE 2250.0364
GLY 2260.0306
THR 2270.0232
GLY 2280.0125
SER 2290.0044
LYS 2300.0038
LYS 2310.0172
THR 2320.0164
ILE 2330.0216
LEU 2340.0221
ILE 2350.0272
TYR 2360.0279
SER 2370.0261
ILE 2380.0243
ILE 2390.0210
GLY 2400.0197
VAL 2410.0189
LYS 2420.0156
LYS 2430.0147
GLY 2440.0191
THR 2450.0208
LEU 2460.0228
ALA 2470.0216
TRP 2480.0223
ALA 2490.0212
ARG 2500.0220
THR 2510.0225
GLY 2520.0170
PHE 2530.0184
SER 2540.0151
PRO 2550.0146
ALA 2560.0203
LYS 2570.0218
LYS 2580.0252
LEU 2590.0258
ASN 2600.0400
ALA 2610.0753
GLY 2620.0471
VAL 2630.0352
VAL 2640.0200
ARG 2650.0175
VAL 2660.0301
PHE 2670.0267
PHE 2680.0232
LEU 2690.0211
ASN 2700.0172
GLN 2710.0164
LYS 2720.0163
LYS 2730.0170
ALA 2740.0226
LYS 2750.0263
ASP 2760.0249
VAL 2770.0218
LEU 2780.0282
ARG 2790.0271
LYS 2800.0203
THR 2810.0127
SER 2820.0418
ARG 2830.0411
PRO 2840.0713
MET 2850.0973
VAL 2860.0846
ASP 2870.0672
LEU 2880.0524
THR 2890.0369
PHE 2900.0086
GLY 2910.0306
GLY 2920.0381

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.