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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 46  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0746
THR 260.0087
LYS 270.0074
CYS 280.0054
THR 290.0052
VAL 300.0049
SER 310.0041
HIS 320.0046
GLU 330.0047
VAL 340.0030
ALA 350.0025
ASP 360.0014
CYS 370.0021
SER 380.0023
HIS 390.0041
LEU 400.0043
LYS 410.0023
LEU 420.0019
THR 430.0016
GLN 440.0024
VAL 450.0026
PRO 460.0036
ASP 470.0046
ASP 480.0053
LEU 490.0048
PRO 500.0054
THR 510.0052
ASN 520.0053
ILE 530.0040
THR 540.0038
VAL 550.0026
LEU 560.0019
ASN 570.0007
LEU 580.0007
THR 590.0015
HIS 600.0020
ASN 610.0005
GLN 620.0004
LEU 630.0007
ARG 640.0010
ARG 650.0018
LEU 660.0021
PRO 670.0027
ALA 680.0035
ALA 690.0037
ASN 700.0033
PHE 710.0035
THR 720.0044
ARG 730.0046
TYR 740.0040
SER 750.0046
GLN 760.0044
LEU 770.0034
THR 780.0034
SER 790.0025
LEU 800.0019
ASP 810.0016
VAL 820.0015
GLY 830.0016
PHE 840.0014
ASN 850.0012
THR 860.0011
ILE 870.0015
SER 880.0019
LYS 890.0023
LEU 900.0025
GLU 910.0030
PRO 920.0033
GLU 930.0035
LEU 940.0032
CYS 950.0033
GLN 960.0039
LYS 970.0038
LEU 980.0036
PRO 990.0039
MET 1000.0036
LEU 1010.0029
LYS 1020.0028
VAL 1030.0025
LEU 1040.0024
ASN 1050.0022
LEU 1060.0021
GLN 1070.0022
HIS 1080.0022
ASN 1090.0021
GLU 1100.0020
LEU 1110.0025
SER 1120.0024
GLN 1130.0025
LEU 1140.0026
SER 1150.0027
ASP 1160.0027
LYS 1170.0028
THR 1180.0029
PHE 1190.0026
ALA 1200.0025
PHE 1210.0030
CYS 1220.0027
THR 1230.0025
ASN 1240.0024
LEU 1250.0023
THR 1260.0022
GLU 1270.0024
LEU 1280.0024
HIS 1290.0026
LEU 1300.0026
MET 1310.0029
SER 1320.0033
ASN 1330.0030
SER 1340.0031
ILE 1350.0026
GLN 1360.0035
LYS 1370.0033
ILE 1380.0030
LYS 1390.0031
ASN 1400.0030
ASN 1410.0023
PRO 1420.0023
PHE 1430.0018
VAL 1440.0014
LYS 1450.0013
GLN 1460.0014
LYS 1470.0009
ASN 1480.0014
LEU 1490.0015
ILE 1500.0017
THR 1510.0023
LEU 1520.0022
ASP 1530.0028
LEU 1540.0029
SER 1550.0035
HIS 1560.0045
ASN 1570.0043
GLY 1580.0047
LEU 1590.0039
SER 1600.0043
SER 1610.0042
THR 1620.0031
LYS 1630.0032
LEU 1640.0026
GLY 1650.0027
THR 1660.0035
GLN 1670.0029
VAL 1680.0023
GLN 1690.0012
LEU 1700.0003
GLU 1710.0016
ASN 1720.0018
LEU 1730.0012
GLN 1740.0019
GLU 1750.0020
LEU 1760.0018
LEU 1770.0027
LEU 1780.0030
SER 1790.0039
ASN 1800.0050
ASN 1810.0051
LYS 1820.0058
ILE 1830.0049
GLN 1840.0058
ALA 1850.0052
LEU 1860.0045
LYS 1870.0050
SER 1880.0048
GLU 1890.0051
GLU 1900.0041
LEU 1910.0029
ASP 1920.0036
ILE 1930.0026
PHE 1940.0019
ALA 1950.0033
ASN 1960.0034
SER 1970.0023
SER 1980.0029
LEU 1990.0019
LYS 2000.0030
LYS 2010.0024
LEU 2020.0013
GLU 2030.0024
LEU 2040.0028
SER 2050.0038
SER 2060.0054
ASN 2070.0051
GLN 2080.0061
ILE 2090.0052
LYS 2100.0065
GLU 2110.0062
PHE 2120.0051
SER 2130.0062
PRO 2140.0065
GLY 2150.0058
CYS 2160.0045
PHE 2170.0033
HIS 2180.0046
ALA 2190.0043
ILE 2200.0031
GLY 2210.0041
ARG 2220.0040
LEU 2230.0027
PHE 2240.0035
GLY 2250.0027
LEU 2260.0014
PHE 2270.0023
LEU 2280.0025
ASN 2290.0040
ASN 2300.0053
VAL 2310.0047
GLN 2320.0057
LEU 2330.0049
GLY 2340.0053
PRO 2350.0049
SER 2360.0062
LEU 2370.0053
THR 2380.0038
GLU 2390.0047
LYS 2400.0054
LEU 2410.0038
CYS 2420.0037
LEU 2430.0054
GLU 2440.0048
LEU 2450.0038
ALA 2460.0055
ASN 2470.0066
THR 2480.0053
SER 2490.0055
ILE 2500.0038
ARG 2510.0050
ASN 2520.0041
LEU 2530.0024
SER 2540.0027
LEU 2550.0023
SER 2560.0038
ASN 2570.0048
SER 2580.0038
GLN 2590.0050
LEU 2600.0038
SER 2610.0051
THR 2620.0045
THR 2630.0035
SER 2640.0044
ASN 2650.0048
THR 2660.0057
THR 2670.0043
PHE 2680.0036
LEU 2690.0054
GLY 2700.0056
LEU 2710.0046
LYS 2720.0063
TRP 2730.0072
THR 2740.0060
ASN 2750.0066
LEU 2760.0051
THR 2770.0058
MET 2780.0049
LEU 2790.0033
ASP 2800.0036
LEU 2810.0030
SER 2820.0045
TYR 2830.0053
ASN 2840.0042
ASN 2850.0054
LEU 2860.0040
ASN 2870.0050
VAL 2880.0045
VAL 2890.0031
GLY 2900.0039
ASN 2910.0039
ASP 2920.0038
SER 2930.0031
PHE 2940.0026
ALA 2950.0041
TRP 2960.0049
LEU 2970.0045
PRO 2980.0061
GLN 2990.0066
LEU 3000.0052
GLU 3010.0064
TYR 3020.0060
PHE 3030.0045
PHE 3040.0047
LEU 3050.0040
GLU 3060.0053
TYR 3070.0060
ASN 3080.0049
ASN 3090.0056
ILE 3100.0047
GLN 3110.0060
HIS 3120.0051
LEU 3130.0035
PHE 3140.0034
SER 3150.0025
HIS 3160.0029
SER 3170.0022
LEU 3180.0015
HIS 3190.0028
GLY 3200.0040
LEU 3210.0038
PHE 3220.0052
ASN 3230.0061
VAL 3240.0052
ARG 3250.0065
TYR 3260.0063
LEU 3270.0050
ASN 3280.0056
LEU 3290.0051
LYS 3300.0067
ARG 3310.0066
SER 3320.0048
PHE 3330.0057
THR 3340.0070
LYS 3350.0088
GLN 3360.0111
SER 3370.0128
ILE 3380.0158
SER 3390.0175
LEU 3400.0157
ALA 3410.0129
SER 3420.0105
LEU 3430.0090
PRO 3440.0062
LYS 3450.0052
ILE 3460.0039
ASP 3470.0033
ASP 3480.0026
PHE 3490.0016
SER 3500.0016
PHE 3510.0019
GLN 3520.0023
TRP 3530.0029
LEU 3540.0035
LYS 3550.0047
CYS 3560.0058
LEU 3570.0052
GLU 3580.0064
HIS 3590.0065
LEU 3600.0056
ASN 3610.0063
MET 3620.0058
GLU 3630.0073
ASP 3640.0081
ASN 3650.0072
ASP 3660.0076
ILE 3670.0062
PRO 3680.0062
GLY 3690.0052
ILE 3700.0040
LYS 3710.0035
SER 3720.0027
ASN 3730.0020
MET 3740.0026
PHE 3750.0029
THR 3760.0023
GLY 3770.0029
LEU 3780.0036
ILE 3790.0044
ASN 3800.0052
LEU 3810.0050
LYS 3820.0060
TYR 3830.0062
LEU 3840.0056
SER 3850.0063
LEU 3860.0061
SER 3870.0070
ASN 3880.0073
SER 3890.0063
PHE 3900.0062
THR 3910.0068
SER 3920.0054
LEU 3930.0045
ARG 3940.0035
THR 3950.0024
LEU 3960.0026
THR 3970.0021
ASN 3980.0021
GLU 3990.0025
THR 4000.0030
PHE 4010.0031
VAL 4020.0029
SER 4030.0031
LEU 4040.0035
ALA 4050.0033
HIS 4060.0033
SER 4070.0039
PRO 4080.0045
LEU 4090.0044
HIS 4100.0050
ILE 4110.0052
LEU 4120.0048
ASN 4130.0052
LEU 4140.0049
THR 4150.0056
LYS 4160.0055
ASN 4170.0052
LYS 4180.0046
ILE 4190.0037
SER 4200.0030
LYS 4210.0018
ILE 4220.0016
GLU 4230.0012
SER 4240.0012
ASP 4250.0018
ALA 4260.0021
PHE 4270.0025
SER 4280.0026
TRP 4290.0031
LEU 4300.0034
GLY 4310.0034
HIS 4320.0039
LEU 4330.0035
GLU 4340.0036
VAL 4350.0035
LEU 4360.0032
ASP 4370.0035
LEU 4380.0030
GLY 4390.0034
LEU 4400.0040
ASN 4410.0037
GLU 4420.0034
ILE 4430.0022
GLY 4440.0022
GLN 4450.0017
GLU 4460.0022
LEU 4470.0016
THR 4480.0021
GLY 4490.0021
GLN 4500.0018
GLU 4510.0011
TRP 4520.0017
ARG 4530.0023
GLY 4540.0030
LEU 4550.0028
GLU 4560.0033
ASN 4570.0035
ILE 4580.0026
PHE 4590.0025
GLU 4600.0017
ILE 4610.0015
TYR 4620.0014
LEU 4630.0011
SER 4640.0014
TYR 4650.0020
ASN 4660.0020
LYS 4670.0027
TYR 4680.0025
LEU 4690.0019
GLN 4700.0028
LEU 4710.0031
THR 4720.0038
ARG 4730.0045
ASN 4740.0039
SER 4750.0029
PHE 4760.0027
ALA 4770.0034
LEU 4780.0032
VAL 4790.0030
PRO 4800.0037
SER 4810.0031
LEU 4820.0025
GLN 4830.0024
ARG 4840.0017
LEU 4850.0014
MET 4860.0008
LEU 4870.0011
ARG 4880.0011
ARG 4890.0019
VAL 4900.0020
ALA 4910.0030
LEU 4920.0030
LYS 4930.0038
ASN 4940.0044
VAL 4950.0041
ASP 4960.0051
SER 4970.0054
SER 4980.0061
PRO 4990.0059
SER 5000.0050
PRO 5010.0041
PHE 5020.0039
GLN 5030.0047
PRO 5040.0046
LEU 5050.0040
ARG 5060.0042
ASN 5070.0039
LEU 5080.0034
THR 5090.0031
ILE 5100.0026
LEU 5110.0024
ASP 5120.0018
LEU 5130.0024
SER 5140.0021
ASN 5150.0026
ASN 5160.0031
ASN 5170.0039
ILE 5180.0041
ALA 5190.0049
ASN 5200.0052
ILE 5210.0047
ASN 5220.0052
ASP 5230.0054
ASP 5240.0053
MET 5250.0047
LEU 5260.0040
GLU 5270.0046
GLY 5280.0047
LEU 5290.0041
GLU 5300.0041
LYS 5310.0038
LEU 5320.0034
GLU 5330.0029
ILE 5340.0026
LEU 5350.0027
ASP 5360.0023
LEU 5370.0029
GLN 5380.0026
HIS 5390.0031
ASN 5400.0037
ASN 5410.0042
LEU 5420.0043
ALA 5430.0044
ARG 5440.0051
LEU 5450.0050
TRP 5460.0044
LYS 5470.0049
HIS 5480.0053
ALA 5490.0060
ASN 5500.0060
PRO 5510.0070
GLY 5520.0070
GLY 5530.0062
PRO 5540.0053
ILE 5550.0051
TYR 5560.0044
PHE 5570.0042
LEU 5580.0038
LYS 5590.0042
GLY 5600.0043
LEU 5610.0033
SER 5620.0032
HIS 5630.0033
LEU 5640.0028
HIS 5650.0026
ILE 5660.0024
LEU 5670.0026
ASN 5680.0024
LEU 5690.0027
GLU 5700.0026
SER 5710.0031
ASN 5720.0035
GLY 5730.0036
PHE 5740.0035
ASP 5750.0035
GLU 5760.0034
ILE 5770.0032
PRO 5780.0035
VAL 5790.0033
GLU 5800.0035
VAL 5810.0029
PHE 5820.0026
LYS 5830.0028
ASP 5840.0029
LEU 5850.0026
PHE 5860.0022
GLU 5870.0028
LEU 5880.0023
LYS 5890.0026
ILE 5900.0023
ILE 5910.0024
ASP 5920.0024
LEU 5930.0024
GLY 5940.0023
LEU 5950.0025
ASN 5960.0030
ASN 5970.0027
LEU 5980.0024
ASN 5990.0019
THR 6000.0019
LEU 6010.0019
PRO 6020.0020
ALA 6030.0020
SER 6040.0023
VAL 6050.0024
PHE 6060.0021
ASN 6070.0022
ASN 6080.0025
GLN 6090.0026
VAL 6100.0030
SER 6110.0033
LEU 6120.0030
LYS 6130.0032
SER 6140.0028
LEU 6150.0023
ASN 6160.0025
LEU 6170.0022
GLN 6180.0022
LYS 6190.0022
ASN 6200.0021
LEU 6210.0019
ILE 6220.0015
THR 6230.0008
SER 6240.0009
VAL 6250.0013
GLU 6260.0015
LYS 6270.0019
LYS 6280.0020
VAL 6290.0020
PHE 6300.0021
GLY 6310.0024
PRO 6320.0028
ALA 6330.0026
PHE 6340.0027
ARG 6350.0033
ASN 6360.0037
LEU 6370.0033
THR 6380.0037
GLU 6390.0033
LEU 6400.0026
ASP 6410.0025
MET 6420.0020
ARG 6430.0020
PHE 6440.0020
ASN 6450.0016
PRO 6460.0015
PHE 6470.0009
ASP 6480.0004
CYS 6490.0006
THR 6500.0010
CYS 6510.0014
GLU 6520.0014
SER 6530.0008
ILE 6540.0008
ALA 6550.0013
TRP 6560.0015
PHE 6570.0014
VAL 6580.0012
ASN 6590.0017
TRP 6600.0020
ILE 6610.0023
ASN 6620.0024
GLU 6630.0031
THR 6640.0035
HIS 6650.0044
THR 6660.0035
ASN 6670.0033
ILE 6680.0028
PRO 6690.0029
GLU 6700.0024
LEU 6710.0019
SER 6720.0016
SER 6730.0021
HIS 6740.0022
TYR 6750.0016
LEU 6760.0016
CYS 6770.0012
ASN 6780.0016
THR 6790.0013
PRO 6800.0016
PRO 6810.0025
HIS 6820.0025
TYR 6830.0018
HIS 6840.0023
GLY 6850.0024
PHE 6860.0017
PRO 6870.0014
VAL 6880.0008
ARG 6890.0008
LEU 6900.0006
PHE 6910.0007
ASP 6920.0014
THR 6930.0018
SER 6940.0026
SER 6950.0029
CYS 6960.0028
GLU 10.0169
ALA 20.0155
ALA 30.0161
ALA 40.0140
LYS 50.0110
MET 60.0112
GLN 70.0115
ARG 80.0088
LEU 90.0079
VAL 100.0097
LEU 110.0085
LEU 120.0061
LEU 130.0067
ALA 140.0088
ILE 150.0076
SER 160.0065
LEU 170.0100
LEU 180.0127
LEU 190.0117
TYR 200.0157
GLN 210.0207
ASP 220.0227
LEU 230.0265
PRO 240.0354
VAL 250.0347
ARG 260.0279
SER 270.0240
GLU 280.0185
PHE 290.0145
GLU 300.0175
LEU 310.0177
ASP 320.0143
ARG 330.0138
ILE 340.0148
CYS 350.0124
GLY 360.0107
TYR 370.0154
GLY 380.0167
THR 390.0136
ALA 400.0110
ARG 410.0117
CYS 420.0108
ARG 430.0104
LYS 440.0092
LYS 450.0090
CYS 460.0097
ARG 470.0140
SER 480.0159
GLN 490.0148
GLU 500.0102
TYR 510.0068
ARG 520.0038
ILE 530.0011
GLY 540.0031
ARG 550.0055
CYS 560.0093
PRO 570.0121
ASN 580.0107
THR 590.0069
TYR 600.0065
ALA 610.0055
CYS 620.0063
CYS 630.0072
LEU 640.0068
ARG 650.0101
LYS 660.0092
TRP 670.0069
ASP 680.0119
GLU 690.0154
SER 700.0160
LEU 710.0091
LEU 720.0120
ASN 730.0155
ARG 740.0110
THR 750.0090
LYS 760.0136
PRO 770.0082
GLU 780.0113
ALA 790.0091
ALA 800.0090
ALA 810.0167
LYS 820.0163
LYS 830.0138
GLU 840.0136
MET 850.0115
ASN 860.0102
LEU 870.0083
SER 880.0069
VAL 890.0045
GLY 900.0044
LEU 910.0039
GLY 920.0056
GLY 930.0098
GLY 940.0107
SER 950.0084
ASN 960.0069
LEU 970.0045
SER 980.0062
VAL 990.0061
GLY 1000.0088
LEU 1010.0112
GLY 1020.0163
GLU 1030.0190
ILE 1040.0227
GLY 1050.0276
GLY 1060.0307
GLY 1070.0217
SER 1080.0185
LYS 1090.0119
LEU 1100.0143
LEU 1110.0117
ASP 1120.0116
ILE 1130.0095
ASN 1140.0122
LEU 1150.0120
GLY 1160.0140
ARG 1170.0189
GLY 1180.0152
GLY 1190.0131
GLY 1200.0074
SER 1210.0044
MET 1220.0047
VAL 1230.0048
ASP 1240.0055
LEU 1250.0063
THR 1260.0070
PHE 1270.0082
GLY 1280.0090
GLY 1290.0102
VAL 1300.0113
GLY 1310.0111
GLY 1320.0115
GLY 1330.0103
SER 1340.0101
THR 1350.0089
PHE 1360.0102
THR 1370.0111
PHE 1380.0095
PHE 1390.0111
PRO 1400.0105
LEU 1410.0132
VAL 1420.0150
ILE 1430.0153
GLY 1440.0187
GLY 1450.0195
GLY 1460.0177
SER 1470.0151
ASP 1480.0135
ALA 1490.0119
MET 1500.0113
TYR 1510.0091
LEU 1520.0084
GLY 1530.0098
PHE 1540.0101
ALA 1550.0122
ALA 1560.0127
GLY 1570.0109
GLY 1580.0098
GLY 1590.0066
SER 1600.0052
ALA 1610.0060
GLY 1620.0063
GLY 1630.0067
GLU 1640.0074
ASN 1650.0074
HIS 1660.0071
VAL 1670.0070
ALA 1680.0064
PHE 1690.0062
GLY 1700.0057
PRO 1710.0186
GLY 1720.0163
PRO 1730.0130
GLY 1740.0087
VAL 1750.0063
ASP 1760.0052
LEU 1770.0056
THR 1780.0056
PHE 1790.0061
GLY 1800.0062
GLY 1810.0070
VAL 1820.0056
GLN 1830.0066
PHE 1840.0078
ALA 1850.0102
MET 1860.0123
VAL 1870.0195
ASN 1880.0233
ASN 1890.0409
GLY 1900.0477
PRO 1910.0596
GLY 1920.0242
PRO 1930.0254
GLY 1940.0410
GLU 1950.0150
SER 1960.0157
PHE 1970.0149
THR 1980.0068
ALA 1990.0069
GLN 2000.0052
PRO 2010.0055
ALA 2020.0024
ASP 2030.0035
MET 2040.0049
GLN 2050.0024
ALA 2060.0116
GLY 2070.0194
ILE 2080.0120
LYS 2090.0214
GLY 2100.0154
PRO 2110.0101
GLY 2120.0055
PRO 2130.0046
GLY 2140.0044
GLY 2150.0091
SER 2160.0170
ILE 2170.0103
GLN 2180.0294
VAL 2190.0190
ILE 2200.0411
ASN 2210.0278
GLY 2220.0214
SER 2230.0108
THR 2240.0065
ILE 2250.0068
GLY 2260.0274
THR 2270.0347
GLY 2280.0352
SER 2290.0351
LYS 2300.0233
LYS 2310.0156
THR 2320.0118
ILE 2330.0102
LEU 2340.0071
ILE 2350.0131
TYR 2360.0197
SER 2370.0292
ILE 2380.0325
ILE 2390.0448
GLY 2400.0512
VAL 2410.0408
LYS 2420.0573
LYS 2430.0344
GLY 2440.0548
THR 2450.0746
LEU 2460.0505
ALA 2470.0574
TRP 2480.0498
ALA 2490.0561
ARG 2500.0465
THR 2510.0359
GLY 2520.0245
PHE 2530.0167
SER 2540.0073
PRO 2550.0121
ALA 2560.0178
LYS 2570.0207
LYS 2580.0205
LEU 2590.0304
ASN 2600.0364
ALA 2610.0372
GLY 2620.0326
VAL 2630.0279
VAL 2640.0300
ARG 2650.0246
VAL 2660.0240
PHE 2670.0227
PHE 2680.0233
LEU 2690.0226
ASN 2700.0274
GLN 2710.0239
LYS 2720.0232
LYS 2730.0238
ALA 2740.0262
LYS 2750.0284
ASP 2760.0289
VAL 2770.0218
LEU 2780.0198
ARG 2790.0208
LYS 2800.0210
THR 2810.0178
SER 2820.0142
ARG 2830.0140
PRO 2840.0180
MET 2850.0119
VAL 2860.0167
ASP 2870.0230
LEU 2880.0089
THR 2890.0199
PHE 2900.0037
GLY 2910.0107
GLY 2920.0364

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.