CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 48  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0860
THR 260.0031
LYS 270.0027
CYS 280.0028
THR 290.0034
VAL 300.0033
SER 310.0041
HIS 320.0040
GLU 330.0030
VAL 340.0031
ALA 350.0026
ASP 360.0032
CYS 370.0026
SER 380.0031
HIS 390.0033
LEU 400.0026
LYS 410.0028
LEU 420.0019
THR 430.0025
GLN 440.0020
VAL 450.0013
PRO 460.0004
ASP 470.0016
ASP 480.0021
LEU 490.0016
PRO 500.0022
THR 510.0019
ASN 520.0017
ILE 530.0011
THR 540.0012
VAL 550.0021
LEU 560.0014
ASN 570.0021
LEU 580.0020
THR 590.0029
HIS 600.0032
ASN 610.0033
GLN 620.0036
LEU 630.0035
ARG 640.0045
ARG 650.0045
LEU 660.0041
PRO 670.0043
ALA 680.0044
ALA 690.0042
ASN 700.0030
PHE 710.0027
THR 720.0034
ARG 730.0025
TYR 740.0015
SER 750.0022
GLN 760.0014
LEU 770.0018
THR 780.0027
SER 790.0032
LEU 800.0032
ASP 810.0030
VAL 820.0034
GLY 830.0042
PHE 840.0046
ASN 850.0044
THR 860.0051
ILE 870.0052
SER 880.0060
LYS 890.0060
LEU 900.0056
GLU 910.0057
PRO 920.0061
GLU 930.0055
LEU 940.0047
CYS 950.0050
GLN 960.0051
LYS 970.0042
LEU 980.0037
PRO 990.0041
MET 1000.0036
LEU 1010.0046
LYS 1020.0050
VAL 1030.0050
LEU 1040.0051
ASN 1050.0050
LEU 1060.0054
GLN 1070.0055
HIS 1080.0056
ASN 1090.0055
GLU 1100.0058
LEU 1110.0056
SER 1120.0058
GLN 1130.0060
LEU 1140.0061
SER 1150.0063
ASP 1160.0065
LYS 1170.0063
THR 1180.0061
PHE 1190.0061
ALA 1200.0062
PHE 1210.0061
CYS 1220.0058
THR 1230.0062
ASN 1240.0058
LEU 1250.0059
THR 1260.0062
GLU 1270.0061
LEU 1280.0059
HIS 1290.0058
LEU 1300.0057
MET 1310.0058
SER 1320.0056
ASN 1330.0056
SER 1340.0053
ILE 1350.0054
GLN 1360.0045
LYS 1370.0048
ILE 1380.0052
LYS 1390.0053
ASN 1400.0058
ASN 1410.0060
PRO 1420.0059
PHE 1430.0061
VAL 1440.0063
LYS 1450.0064
GLN 1460.0064
LYS 1470.0068
ASN 1480.0068
LEU 1490.0065
ILE 1500.0066
THR 1510.0062
LEU 1520.0058
ASP 1530.0056
LEU 1540.0051
SER 1550.0051
HIS 1560.0052
ASN 1570.0047
GLY 1580.0042
LEU 1590.0040
SER 1600.0037
SER 1610.0042
THR 1620.0046
LYS 1630.0046
LEU 1640.0050
GLY 1650.0051
THR 1660.0056
GLN 1670.0058
VAL 1680.0059
GLN 1690.0059
LEU 1700.0060
GLU 1710.0065
ASN 1720.0067
LEU 1730.0060
GLN 1740.0062
GLU 1750.0057
LEU 1760.0048
LEU 1770.0048
LEU 1780.0041
SER 1790.0045
ASN 1800.0046
ASN 1810.0046
LYS 1820.0042
ILE 1830.0038
GLN 1840.0037
ALA 1850.0034
LEU 1860.0041
LYS 1870.0041
SER 1880.0044
GLU 1890.0045
GLU 1900.0042
LEU 1910.0045
ASP 1920.0048
ILE 1930.0050
PHE 1940.0052
ALA 1950.0054
ASN 1960.0059
SER 1970.0054
SER 1980.0056
LEU 1990.0050
LYS 2000.0054
LYS 2010.0048
LEU 2020.0039
GLU 2030.0040
LEU 2040.0034
SER 2050.0041
SER 2060.0051
ASN 2070.0045
GLN 2080.0047
ILE 2090.0041
LYS 2100.0044
GLU 2110.0045
PHE 2120.0041
SER 2130.0045
PRO 2140.0047
GLY 2150.0045
CYS 2160.0040
PHE 2170.0039
HIS 2180.0045
ALA 2190.0045
ILE 2200.0044
GLY 2210.0046
ARG 2220.0044
LEU 2230.0037
PHE 2240.0041
GLY 2250.0036
LEU 2260.0030
PHE 2270.0034
LEU 2280.0033
ASN 2290.0042
ASN 2300.0049
VAL 2310.0047
GLN 2320.0050
LEU 2330.0043
GLY 2340.0041
PRO 2350.0038
SER 2360.0047
LEU 2370.0043
THR 2380.0033
GLU 2390.0040
LYS 2400.0044
LEU 2410.0036
CYS 2420.0035
LEU 2430.0045
GLU 2440.0040
LEU 2450.0034
ALA 2460.0042
ASN 2470.0048
THR 2480.0038
SER 2490.0038
ILE 2500.0031
ARG 2510.0039
ASN 2520.0034
LEU 2530.0024
SER 2540.0029
LEU 2550.0027
SER 2560.0038
ASN 2570.0043
SER 2580.0039
GLN 2590.0038
LEU 2600.0028
SER 2610.0024
THR 2620.0024
THR 2630.0027
SER 2640.0043
ASN 2650.0054
THR 2660.0054
THR 2670.0036
PHE 2680.0034
LEU 2690.0051
GLY 2700.0045
LEU 2710.0039
LYS 2720.0055
TRP 2730.0052
THR 2740.0040
ASN 2750.0045
LEU 2760.0038
THR 2770.0050
MET 2780.0045
LEU 2790.0033
ASP 2800.0034
LEU 2810.0022
SER 2820.0037
TYR 2830.0040
ASN 2840.0026
ASN 2850.0022
LEU 2860.0023
ASN 2870.0024
VAL 2880.0033
VAL 2890.0038
GLY 2900.0048
ASN 2910.0061
ASP 2920.0064
SER 2930.0047
PHE 2940.0050
ALA 2950.0064
TRP 2960.0057
LEU 2970.0053
PRO 2980.0070
GLN 2990.0066
LEU 3000.0059
GLU 3010.0080
TYR 3020.0074
PHE 3030.0061
PHE 3040.0056
LEU 3050.0046
GLU 3060.0056
TYR 3070.0053
ASN 3080.0038
ASN 3090.0036
ILE 3100.0044
GLN 3110.0051
HIS 3120.0061
LEU 3130.0066
PHE 3140.0071
SER 3150.0082
HIS 3160.0078
SER 3170.0062
LEU 3180.0069
HIS 3190.0076
GLY 3200.0077
LEU 3210.0080
PHE 3220.0095
ASN 3230.0094
VAL 3240.0088
ARG 3250.0099
TYR 3260.0095
LEU 3270.0086
ASN 3280.0082
LEU 3290.0076
LYS 3300.0080
ARG 3310.0078
SER 3320.0062
PHE 3330.0066
THR 3340.0059
LYS 3350.0069
GLN 3360.0077
SER 3370.0075
ILE 3380.0099
SER 3390.0104
LEU 3400.0099
ALA 3410.0089
SER 3420.0076
LEU 3430.0077
PRO 3440.0068
LYS 3450.0072
ILE 3460.0073
ASP 3470.0078
ASP 3480.0085
PHE 3490.0090
SER 3500.0085
PHE 3510.0092
GLN 3520.0101
TRP 3530.0094
LEU 3540.0095
LYS 3550.0108
CYS 3560.0114
LEU 3570.0108
GLU 3580.0115
HIS 3590.0107
LEU 3600.0098
ASN 3610.0095
MET 3620.0090
GLU 3630.0090
ASP 3640.0084
ASN 3650.0079
ASP 3660.0068
ILE 3670.0071
PRO 3680.0066
GLY 3690.0069
ILE 3700.0075
LYS 3710.0079
SER 3720.0087
ASN 3730.0090
MET 3740.0087
PHE 3750.0093
THR 3760.0102
GLY 3770.0109
LEU 3780.0109
ILE 3790.0119
ASN 3800.0119
LEU 3810.0112
LYS 3820.0112
TYR 3830.0105
LEU 3840.0095
SER 3850.0088
LEU 3860.0079
SER 3870.0074
ASN 3880.0067
SER 3890.0071
PHE 3900.0062
THR 3910.0053
SER 3920.0031
LEU 3930.0034
ARG 3940.0017
THR 3950.0033
LEU 3960.0035
THR 3970.0049
ASN 3980.0060
GLU 3990.0074
THR 4000.0064
PHE 4010.0072
VAL 4020.0085
SER 4030.0092
LEU 4040.0092
ALA 4050.0099
HIS 4060.0109
SER 4070.0104
PRO 4080.0109
LEU 4090.0097
HIS 4100.0097
ILE 4110.0082
LEU 4120.0070
ASN 4130.0062
LEU 4140.0046
THR 4150.0042
LYS 4160.0041
ASN 4170.0030
LYS 4180.0011
ILE 4190.0011
SER 4200.0020
LYS 4210.0027
ILE 4220.0026
GLU 4230.0041
SER 4240.0045
ASP 4250.0050
ALA 4260.0049
PHE 4270.0051
SER 4280.0063
TRP 4290.0075
LEU 4300.0071
GLY 4310.0074
HIS 4320.0079
LEU 4330.0065
GLU 4340.0063
VAL 4350.0055
LEU 4360.0035
ASP 4370.0029
LEU 4380.0013
GLY 4390.0019
LEU 4400.0021
ASN 4410.0015
GLU 4420.0022
ILE 4430.0021
GLY 4440.0037
GLN 4450.0039
GLU 4460.0045
LEU 4470.0032
THR 4480.0039
GLY 4490.0028
GLN 4500.0040
GLU 4510.0036
TRP 4520.0030
ARG 4530.0043
GLY 4540.0052
LEU 4550.0044
GLU 4560.0045
ASN 4570.0047
ILE 4580.0035
PHE 4590.0035
GLU 4600.0027
ILE 4610.0011
TYR 4620.0011
LEU 4630.0013
SER 4640.0024
TYR 4650.0031
ASN 4660.0030
LYS 4670.0041
TYR 4680.0044
LEU 4690.0037
GLN 4700.0043
LEU 4710.0037
THR 4720.0034
ARG 4730.0025
ASN 4740.0023
SER 4750.0024
PHE 4760.0021
ALA 4770.0022
LEU 4780.0027
VAL 4790.0023
PRO 4800.0018
SER 4810.0016
LEU 4820.0007
GLN 4830.0014
ARG 4840.0013
LEU 4850.0017
MET 4860.0028
LEU 4870.0031
ARG 4880.0040
ARG 4890.0046
VAL 4900.0041
ALA 4910.0052
LEU 4920.0046
LYS 4930.0047
ASN 4940.0044
VAL 4950.0039
ASP 4960.0042
SER 4970.0036
SER 4980.0031
PRO 4990.0026
SER 5000.0029
PRO 5010.0026
PHE 5020.0022
GLN 5030.0017
PRO 5040.0010
LEU 5050.0011
ARG 5060.0021
ASN 5070.0019
LEU 5080.0017
THR 5090.0022
ILE 5100.0033
LEU 5110.0035
ASP 5120.0041
LEU 5130.0043
SER 5140.0051
ASN 5150.0056
ASN 5160.0058
ASN 5170.0060
ILE 5180.0057
ALA 5190.0059
ASN 5200.0056
ILE 5210.0055
ASN 5220.0049
ASP 5230.0049
ASP 5240.0041
MET 5250.0042
LEU 5260.0044
GLU 5270.0040
GLY 5280.0032
LEU 5290.0028
GLU 5300.0036
LYS 5310.0030
LEU 5320.0036
GLU 5330.0048
ILE 5340.0054
LEU 5350.0051
ASP 5360.0057
LEU 5370.0059
GLN 5380.0067
HIS 5390.0070
ASN 5400.0065
ASN 5410.0075
LEU 5420.0074
ALA 5430.0076
ARG 5440.0074
LEU 5450.0072
TRP 5460.0078
LYS 5470.0080
HIS 5480.0079
ALA 5490.0081
ASN 5500.0079
PRO 5510.0083
GLY 5520.0079
GLY 5530.0075
PRO 5540.0070
ILE 5550.0067
TYR 5560.0062
PHE 5570.0060
LEU 5580.0060
LYS 5590.0058
GLY 5600.0054
LEU 5610.0050
SER 5620.0053
HIS 5630.0056
LEU 5640.0060
HIS 5650.0070
ILE 5660.0071
LEU 5670.0071
ASN 5680.0074
LEU 5690.0074
GLU 5700.0079
SER 5710.0081
ASN 5720.0081
GLY 5730.0081
PHE 5740.0081
ASP 5750.0081
GLU 5760.0086
ILE 5770.0084
PRO 5780.0082
VAL 5790.0083
GLU 5800.0080
VAL 5810.0077
PHE 5820.0077
LYS 5830.0073
ASP 5840.0069
LEU 5850.0072
PHE 5860.0083
GLU 5870.0084
LEU 5880.0081
LYS 5890.0083
ILE 5900.0080
ILE 5910.0086
ASP 5920.0086
LEU 5930.0086
GLY 5940.0085
LEU 5950.0086
ASN 5960.0090
ASN 5970.0088
LEU 5980.0089
ASN 5990.0084
THR 6000.0092
LEU 6010.0087
PRO 6020.0093
ALA 6030.0092
SER 6040.0095
VAL 6050.0095
PHE 6060.0092
ASN 6070.0092
ASN 6080.0093
GLN 6090.0091
VAL 6100.0091
SER 6110.0095
LEU 6120.0091
LYS 6130.0086
SER 6140.0084
LEU 6150.0083
ASN 6160.0084
LEU 6170.0083
GLN 6180.0075
LYS 6190.0075
ASN 6200.0083
LEU 6210.0082
ILE 6220.0083
THR 6230.0079
SER 6240.0093
VAL 6250.0089
GLU 6260.0085
LYS 6270.0087
LYS 6280.0105
VAL 6290.0101
PHE 6300.0086
GLY 6310.0085
PRO 6320.0093
ALA 6330.0088
PHE 6340.0077
ARG 6350.0080
ASN 6360.0083
LEU 6370.0076
THR 6380.0073
GLU 6390.0070
LEU 6400.0063
ASP 6410.0064
MET 6420.0060
ARG 6430.0049
PHE 6440.0048
ASN 6450.0057
PRO 6460.0060
PHE 6470.0063
ASP 6480.0090
CYS 6490.0093
THR 6500.0124
CYS 6510.0131
GLU 6520.0143
SER 6530.0116
ILE 6540.0086
ALA 6550.0095
TRP 6560.0075
PHE 6570.0057
VAL 6580.0046
ASN 6590.0048
TRP 6600.0037
ILE 6610.0019
ASN 6620.0023
GLU 6630.0017
THR 6640.0015
HIS 6650.0032
THR 6660.0043
ASN 6670.0048
ILE 6680.0037
PRO 6690.0047
GLU 6700.0039
LEU 6710.0021
SER 6720.0034
SER 6730.0034
HIS 6740.0017
TYR 6750.0013
LEU 6760.0025
CYS 6770.0057
ASN 6780.0068
THR 6790.0101
PRO 6800.0123
PRO 6810.0125
HIS 6820.0136
TYR 6830.0105
HIS 6840.0083
GLY 6850.0058
PHE 6860.0072
PRO 6870.0049
VAL 6880.0048
ARG 6890.0044
LEU 6900.0077
PHE 6910.0087
ASP 6920.0121
THR 6930.0122
SER 6940.0158
SER 6950.0181
CYS 6960.0170
GLU 10.0137
ALA 20.0109
ALA 30.0087
ALA 40.0084
LYS 50.0063
MET 60.0041
GLN 70.0038
ARG 80.0031
LEU 90.0032
VAL 100.0037
LEU 110.0052
LEU 120.0044
LEU 130.0067
ALA 140.0085
ILE 150.0086
SER 160.0107
LEU 170.0165
LEU 180.0177
LEU 190.0158
TYR 200.0217
GLN 210.0275
ASP 220.0264
LEU 230.0292
PRO 240.0372
VAL 250.0391
ARG 260.0281
SER 270.0212
GLU 280.0175
PHE 290.0112
GLU 300.0107
LEU 310.0066
ASP 320.0060
ARG 330.0029
ILE 340.0024
CYS 350.0044
GLY 360.0051
TYR 370.0050
GLY 380.0035
THR 390.0036
ALA 400.0034
ARG 410.0032
CYS 420.0036
ARG 430.0035
LYS 440.0038
LYS 450.0039
CYS 460.0038
ARG 470.0037
SER 480.0037
GLN 490.0038
GLU 500.0039
TYR 510.0042
ARG 520.0043
ILE 530.0048
GLY 540.0048
ARG 550.0046
CYS 560.0054
PRO 570.0060
ASN 580.0052
THR 590.0053
TYR 600.0045
ALA 610.0042
CYS 620.0043
CYS 630.0041
LEU 640.0042
ARG 650.0041
LYS 660.0033
TRP 670.0030
ASP 680.0046
GLU 690.0049
SER 700.0062
LEU 710.0042
LEU 720.0029
ASN 730.0057
ARG 740.0055
THR 750.0028
LYS 760.0067
PRO 770.0087
GLU 780.0167
ALA 790.0180
ALA 800.0111
ALA 810.0082
LYS 820.0081
LYS 830.0079
GLU 840.0082
MET 850.0079
ASN 860.0061
LEU 870.0056
SER 880.0036
VAL 890.0033
GLY 900.0017
LEU 910.0031
GLY 920.0039
GLY 930.0062
GLY 940.0054
SER 950.0043
ASN 960.0007
LEU 970.0026
SER 980.0033
VAL 990.0057
GLY 1000.0070
LEU 1010.0085
GLY 1020.0096
GLU 1030.0090
ILE 1040.0120
GLY 1050.0138
GLY 1060.0189
GLY 1070.0157
SER 1080.0129
LYS 1090.0086
LEU 1100.0071
LEU 1110.0075
ASP 1120.0062
ILE 1130.0051
ASN 1140.0058
LEU 1150.0075
GLY 1160.0124
ARG 1170.0201
GLY 1180.0170
GLY 1190.0149
GLY 1200.0082
SER 1210.0042
MET 1220.0038
VAL 1230.0040
ASP 1240.0038
LEU 1250.0046
THR 1260.0043
PHE 1270.0064
GLY 1280.0072
GLY 1290.0087
VAL 1300.0106
GLY 1310.0113
GLY 1320.0118
GLY 1330.0111
SER 1340.0104
THR 1350.0093
PHE 1360.0098
THR 1370.0121
PHE 1380.0099
PHE 1390.0130
PRO 1400.0121
LEU 1410.0159
VAL 1420.0171
ILE 1430.0195
GLY 1440.0231
GLY 1450.0247
GLY 1460.0219
SER 1470.0175
ASP 1480.0141
ALA 1490.0127
MET 1500.0119
TYR 1510.0106
LEU 1520.0096
GLY 1530.0108
PHE 1540.0104
ALA 1550.0118
ALA 1560.0114
GLY 1570.0105
GLY 1580.0112
GLY 1590.0094
SER 1600.0094
ALA 1610.0087
GLY 1620.0086
GLY 1630.0074
GLU 1640.0067
ASN 1650.0057
HIS 1660.0044
VAL 1670.0046
ALA 1680.0035
PHE 1690.0046
GLY 1700.0043
PRO 1710.0086
GLY 1720.0068
PRO 1730.0047
GLY 1740.0053
VAL 1750.0052
ASP 1760.0050
LEU 1770.0048
THR 1780.0035
PHE 1790.0045
GLY 1800.0050
GLY 1810.0073
VAL 1820.0064
GLN 1830.0083
PHE 1840.0104
ALA 1850.0141
MET 1860.0170
VAL 1870.0238
ASN 1880.0233
ASN 1890.0384
GLY 1900.0408
PRO 1910.0384
GLY 1920.0133
PRO 1930.0246
GLY 1940.0382
GLU 1950.0136
SER 1960.0303
PHE 1970.0104
THR 1980.0336
ALA 1990.0239
GLN 2000.0223
PRO 2010.0121
ALA 2020.0193
ASP 2030.0377
MET 2040.0456
GLN 2050.0585
ALA 2060.0566
GLY 2070.0712
ILE 2080.0283
LYS 2090.0860
GLY 2100.0681
PRO 2110.0233
GLY 2120.0225
PRO 2130.0155
GLY 2140.0407
GLY 2150.0452
SER 2160.0490
ILE 2170.0405
GLN 2180.0342
VAL 2190.0291
ILE 2200.0292
ASN 2210.0324
GLY 2220.0277
SER 2230.0263
THR 2240.0223
ILE 2250.0175
GLY 2260.0140
THR 2270.0116
GLY 2280.0070
SER 2290.0051
LYS 2300.0054
LYS 2310.0045
THR 2320.0073
ILE 2330.0061
LEU 2340.0086
ILE 2350.0088
TYR 2360.0128
SER 2370.0122
ILE 2380.0138
ILE 2390.0131
GLY 2400.0172
VAL 2410.0135
LYS 2420.0128
LYS 2430.0049
GLY 2440.0243
THR 2450.0283
LEU 2460.0181
ALA 2470.0184
TRP 2480.0164
ALA 2490.0164
ARG 2500.0129
THR 2510.0097
GLY 2520.0062
PHE 2530.0039
SER 2540.0024
PRO 2550.0076
ALA 2560.0091
LYS 2570.0103
LYS 2580.0115
LEU 2590.0120
ASN 2600.0135
ALA 2610.0122
GLY 2620.0090
VAL 2630.0096
VAL 2640.0077
ARG 2650.0073
VAL 2660.0076
PHE 2670.0065
PHE 2680.0068
LEU 2690.0058
ASN 2700.0072
GLN 2710.0092
LYS 2720.0073
LYS 2730.0066
ALA 2740.0091
LYS 2750.0117
ASP 2760.0113
VAL 2770.0079
LEU 2780.0091
ARG 2790.0101
LYS 2800.0086
THR 2810.0060
SER 2820.0068
ARG 2830.0049
PRO 2840.0103
MET 2850.0110
VAL 2860.0064
ASP 2870.0130
LEU 2880.0084
THR 2890.0134
PHE 2900.0035
GLY 2910.0071
GLY 2920.0181

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.