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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 67  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0735
THR 260.0042
LYS 270.0023
CYS 280.0015
THR 290.0026
VAL 300.0035
SER 310.0036
HIS 320.0063
GLU 330.0064
VAL 340.0049
ALA 350.0025
ASP 360.0026
CYS 370.0012
SER 380.0030
HIS 390.0043
LEU 400.0036
LYS 410.0076
LEU 420.0070
THR 430.0092
GLN 440.0086
VAL 450.0067
PRO 460.0078
ASP 470.0099
ASP 480.0102
LEU 490.0083
PRO 500.0101
THR 510.0104
ASN 520.0104
ILE 530.0075
THR 540.0071
VAL 550.0048
LEU 560.0026
ASN 570.0012
LEU 580.0013
THR 590.0029
HIS 600.0048
ASN 610.0062
GLN 620.0080
LEU 630.0069
ARG 640.0082
ARG 650.0068
LEU 660.0064
PRO 670.0076
ALA 680.0068
ALA 690.0089
ASN 700.0084
PHE 710.0070
THR 720.0089
ARG 730.0097
TYR 740.0076
SER 750.0078
GLN 760.0073
LEU 770.0049
THR 780.0051
SER 790.0040
LEU 800.0023
ASP 810.0018
VAL 820.0031
GLY 830.0042
PHE 840.0057
ASN 850.0061
THR 860.0067
ILE 870.0060
SER 880.0060
LYS 890.0054
LEU 900.0047
GLU 910.0053
PRO 920.0049
GLU 930.0045
LEU 940.0045
CYS 950.0046
GLN 960.0039
LYS 970.0045
LEU 980.0041
PRO 990.0044
MET 1000.0051
LEU 1010.0049
LYS 1020.0061
VAL 1030.0054
LEU 1040.0046
ASN 1050.0045
LEU 1060.0045
GLN 1070.0046
HIS 1080.0050
ASN 1090.0049
GLU 1100.0049
LEU 1110.0037
SER 1120.0036
GLN 1130.0046
LEU 1140.0052
SER 1150.0066
ASP 1160.0079
LYS 1170.0076
THR 1180.0063
PHE 1190.0070
ALA 1200.0084
PHE 1210.0077
CYS 1220.0075
THR 1230.0086
ASN 1240.0086
LEU 1250.0077
THR 1260.0079
GLU 1270.0067
LEU 1280.0056
HIS 1290.0046
LEU 1300.0038
MET 1310.0035
SER 1320.0031
ASN 1330.0026
SER 1340.0026
ILE 1350.0029
GLN 1360.0049
LYS 1370.0053
ILE 1380.0052
LYS 1390.0073
ASN 1400.0086
ASN 1410.0084
PRO 1420.0075
PHE 1430.0074
VAL 1440.0091
LYS 1450.0101
GLN 1460.0091
LYS 1470.0103
ASN 1480.0104
LEU 1490.0084
ILE 1500.0083
THR 1510.0064
LEU 1520.0047
ASP 1530.0036
LEU 1540.0019
SER 1550.0027
HIS 1560.0037
ASN 1570.0027
GLY 1580.0040
LEU 1590.0035
SER 1600.0050
SER 1610.0045
THR 1620.0021
LYS 1630.0034
LEU 1640.0041
GLY 1650.0063
THR 1660.0084
GLN 1670.0088
VAL 1680.0079
GLN 1690.0078
LEU 1700.0073
GLU 1710.0080
ASN 1720.0089
LEU 1730.0066
GLN 1740.0070
GLU 1750.0058
LEU 1760.0035
LEU 1770.0036
LEU 1780.0028
SER 1790.0048
ASN 1800.0057
ASN 1810.0048
LYS 1820.0060
ILE 1830.0056
GLN 1840.0072
ALA 1850.0065
LEU 1860.0057
LYS 1870.0048
SER 1880.0029
GLU 1890.0033
GLU 1900.0026
LEU 1910.0013
ASP 1920.0022
ILE 1930.0036
PHE 1940.0031
ALA 1950.0034
ASN 1960.0052
SER 1970.0047
SER 1980.0058
LEU 1990.0050
LYS 2000.0071
LYS 2010.0060
LEU 2020.0048
GLU 2030.0054
LEU 2040.0055
SER 2050.0069
SER 2060.0072
ASN 2070.0067
GLN 2080.0077
ILE 2090.0072
LYS 2100.0081
GLU 2110.0078
PHE 2120.0071
SER 2130.0065
PRO 2140.0063
GLY 2150.0054
CYS 2160.0049
PHE 2170.0051
HIS 2180.0046
ALA 2190.0023
ILE 2200.0031
GLY 2210.0032
ARG 2220.0047
LEU 2230.0053
PHE 2240.0068
GLY 2250.0070
LEU 2260.0067
PHE 2270.0067
LEU 2280.0070
ASN 2290.0072
ASN 2300.0075
VAL 2310.0073
GLN 2320.0070
LEU 2330.0074
GLY 2340.0070
PRO 2350.0072
SER 2360.0084
LEU 2370.0081
THR 2380.0081
GLU 2390.0084
LYS 2400.0084
LEU 2410.0082
CYS 2420.0087
LEU 2430.0088
GLU 2440.0080
LEU 2450.0080
ALA 2460.0089
ASN 2470.0087
THR 2480.0078
SER 2490.0076
ILE 2500.0076
ARG 2510.0070
ASN 2520.0065
LEU 2530.0065
SER 2540.0061
LEU 2550.0064
SER 2560.0058
ASN 2570.0055
SER 2580.0059
GLN 2590.0054
LEU 2600.0054
SER 2610.0038
THR 2620.0039
THR 2630.0044
SER 2640.0046
ASN 2650.0051
THR 2660.0077
THR 2670.0072
PHE 2680.0073
LEU 2690.0081
GLY 2700.0086
LEU 2710.0082
LYS 2720.0090
TRP 2730.0092
THR 2740.0084
ASN 2750.0081
LEU 2760.0066
THR 2770.0060
MET 2780.0053
LEU 2790.0050
ASP 2800.0044
LEU 2810.0043
SER 2820.0040
TYR 2830.0038
ASN 2840.0039
ASN 2850.0034
LEU 2860.0030
ASN 2870.0029
VAL 2880.0028
VAL 2890.0029
GLY 2900.0028
ASN 2910.0026
ASP 2920.0036
SER 2930.0038
PHE 2940.0045
ALA 2950.0050
TRP 2960.0061
LEU 2970.0057
PRO 2980.0060
GLN 2990.0060
LEU 3000.0050
GLU 3010.0042
TYR 3020.0037
PHE 3030.0032
PHE 3040.0028
LEU 3050.0027
GLU 3060.0034
TYR 3070.0025
ASN 3080.0024
ASN 3090.0018
ILE 3100.0029
GLN 3110.0036
HIS 3120.0036
LEU 3130.0037
PHE 3140.0036
SER 3150.0037
HIS 3160.0031
SER 3170.0027
LEU 3180.0032
HIS 3190.0038
GLY 3200.0044
LEU 3210.0033
PHE 3220.0043
ASN 3230.0045
VAL 3240.0033
ARG 3250.0033
TYR 3260.0026
LEU 3270.0025
ASN 3280.0025
LEU 3290.0026
LYS 3300.0027
ARG 3310.0013
SER 3320.0026
PHE 3330.0026
THR 3340.0025
LYS 3350.0021
GLN 3360.0069
SER 3370.0110
ILE 3380.0157
SER 3390.0200
LEU 3400.0192
ALA 3410.0110
SER 3420.0093
LEU 3430.0060
PRO 3440.0046
LYS 3450.0061
ILE 3460.0041
ASP 3470.0040
ASP 3480.0041
PHE 3490.0041
SER 3500.0040
PHE 3510.0034
GLN 3520.0039
TRP 3530.0038
LEU 3540.0036
LYS 3550.0041
CYS 3560.0035
LEU 3570.0032
GLU 3580.0033
HIS 3590.0035
LEU 3600.0036
ASN 3610.0035
MET 3620.0035
GLU 3630.0034
ASP 3640.0035
ASN 3650.0035
ASP 3660.0026
ILE 3670.0029
PRO 3680.0030
GLY 3690.0030
ILE 3700.0033
LYS 3710.0033
SER 3720.0028
ASN 3730.0031
MET 3740.0035
PHE 3750.0034
THR 3760.0030
GLY 3770.0030
LEU 3780.0030
ILE 3790.0030
ASN 3800.0031
LEU 3810.0042
LYS 3820.0050
TYR 3830.0055
LEU 3840.0048
SER 3850.0054
LEU 3860.0045
SER 3870.0052
ASN 3880.0053
SER 3890.0049
PHE 3900.0044
THR 3910.0047
SER 3920.0046
LEU 3930.0035
ARG 3940.0042
THR 3950.0034
LEU 3960.0017
THR 3970.0017
ASN 3980.0022
GLU 3990.0014
THR 4000.0013
PHE 4010.0017
VAL 4020.0009
SER 4030.0017
LEU 4040.0030
ALA 4050.0030
HIS 4060.0027
SER 4070.0035
PRO 4080.0054
LEU 4090.0058
HIS 4100.0078
ILE 4110.0083
LEU 4120.0066
ASN 4130.0069
LEU 4140.0055
THR 4150.0065
LYS 4160.0072
ASN 4170.0057
LYS 4180.0058
ILE 4190.0038
SER 4200.0037
LYS 4210.0027
ILE 4220.0015
GLU 4230.0028
SER 4240.0047
ASP 4250.0052
ALA 4260.0027
PHE 4270.0044
SER 4280.0055
TRP 4290.0049
LEU 4300.0063
GLY 4310.0084
HIS 4320.0095
LEU 4330.0088
GLU 4340.0107
VAL 4350.0103
LEU 4360.0082
ASP 4370.0079
LEU 4380.0057
GLY 4390.0067
LEU 4400.0076
ASN 4410.0062
GLU 4420.0054
ILE 4430.0032
GLY 4440.0035
GLN 4450.0029
GLU 4460.0045
LEU 4470.0048
THR 4480.0070
GLY 4490.0078
GLN 4500.0082
GLU 4510.0057
TRP 4520.0073
ARG 4530.0089
GLY 4540.0100
LEU 4550.0100
GLU 4560.0127
ASN 4570.0133
ILE 4580.0119
PHE 4590.0133
GLU 4600.0118
ILE 4610.0095
TYR 4620.0086
LEU 4630.0060
SER 4640.0068
TYR 4650.0070
ASN 4660.0050
LYS 4670.0048
TYR 4680.0032
LEU 4690.0022
GLN 4700.0039
LEU 4710.0054
THR 4720.0084
ARG 4730.0106
ASN 4740.0113
SER 4750.0088
PHE 4760.0098
ALA 4770.0121
LEU 4780.0123
VAL 4790.0125
PRO 4800.0146
SER 4810.0146
LEU 4820.0129
GLN 4830.0136
ARG 4840.0121
LEU 4850.0100
MET 4860.0086
LEU 4870.0057
ARG 4880.0062
ARG 4890.0054
VAL 4900.0033
ALA 4910.0029
LEU 4920.0021
LYS 4930.0039
ASN 4940.0061
VAL 4950.0057
ASP 4960.0075
SER 4970.0097
SER 4980.0124
PRO 4990.0130
SER 5000.0105
PRO 5010.0093
PHE 5020.0096
GLN 5030.0118
PRO 5040.0138
LEU 5050.0132
ARG 5060.0126
ASN 5070.0129
LEU 5080.0123
THR 5090.0121
ILE 5100.0117
LEU 5110.0094
ASP 5120.0077
LEU 5130.0050
SER 5140.0048
ASN 5150.0044
ASN 5160.0022
ASN 5170.0028
ILE 5180.0030
ALA 5190.0049
ASN 5200.0063
ILE 5210.0059
ASN 5220.0083
ASP 5230.0088
ASP 5240.0104
MET 5250.0088
LEU 5260.0088
GLU 5270.0103
GLY 5280.0119
LEU 5290.0113
GLU 5300.0119
LYS 5310.0116
LEU 5320.0101
GLU 5330.0099
ILE 5340.0088
LEU 5350.0075
ASP 5360.0059
LEU 5370.0033
GLN 5380.0034
HIS 5390.0034
ASN 5400.0021
ASN 5410.0037
LEU 5420.0037
ALA 5430.0054
ARG 5440.0078
LEU 5450.0072
TRP 5460.0066
LYS 5470.0094
HIS 5480.0115
ALA 5490.0141
ASN 5500.0129
PRO 5510.0164
GLY 5520.0166
GLY 5530.0137
PRO 5540.0097
ILE 5550.0087
TYR 5560.0073
PHE 5570.0073
LEU 5580.0062
LYS 5590.0081
GLY 5600.0099
LEU 5610.0086
SER 5620.0090
HIS 5630.0096
LEU 5640.0081
HIS 5650.0079
ILE 5660.0064
LEU 5670.0042
ASN 5680.0033
LEU 5690.0015
GLU 5700.0029
SER 5710.0040
ASN 5720.0030
GLY 5730.0048
PHE 5740.0042
ASP 5750.0058
GLU 5760.0062
ILE 5770.0045
PRO 5780.0058
VAL 5790.0052
GLU 5800.0054
VAL 5810.0044
PHE 5820.0030
LYS 5830.0047
ASP 5840.0056
LEU 5850.0045
PHE 5860.0037
GLU 5870.0049
LEU 5880.0033
LYS 5890.0042
ILE 5900.0036
ILE 5910.0018
ASP 5920.0024
LEU 5930.0026
GLY 5940.0038
LEU 5950.0043
ASN 5960.0040
ASN 5970.0039
LEU 5980.0037
ASN 5990.0035
THR 6000.0033
LEU 6010.0052
PRO 6020.0057
ALA 6030.0058
SER 6040.0042
VAL 6050.0030
PHE 6060.0031
ASN 6070.0038
ASN 6080.0019
GLN 6090.0013
VAL 6100.0024
SER 6110.0026
LEU 6120.0027
LYS 6130.0036
SER 6140.0035
LEU 6150.0036
ASN 6160.0039
LEU 6170.0035
GLN 6180.0030
LYS 6190.0025
ASN 6200.0027
LEU 6210.0020
ILE 6220.0027
THR 6230.0023
SER 6240.0035
VAL 6250.0040
GLU 6260.0059
LYS 6270.0072
LYS 6280.0076
VAL 6290.0061
PHE 6300.0058
GLY 6310.0069
PRO 6320.0067
ALA 6330.0057
PHE 6340.0062
ARG 6350.0073
ASN 6360.0063
LEU 6370.0056
THR 6380.0058
GLU 6390.0051
LEU 6400.0045
ASP 6410.0045
MET 6420.0031
ARG 6430.0026
PHE 6440.0015
ASN 6450.0003
PRO 6460.0023
PHE 6470.0019
ASP 6480.0041
CYS 6490.0044
THR 6500.0055
CYS 6510.0036
GLU 6520.0058
SER 6530.0042
ILE 6540.0015
ALA 6550.0021
TRP 6560.0050
PHE 6570.0043
VAL 6580.0043
ASN 6590.0061
TRP 6600.0075
ILE 6610.0077
ASN 6620.0087
GLU 6630.0100
THR 6640.0106
HIS 6650.0122
THR 6660.0072
ASN 6670.0072
ILE 6680.0057
PRO 6690.0064
GLU 6700.0061
LEU 6710.0075
SER 6720.0086
SER 6730.0084
HIS 6740.0057
TYR 6750.0043
LEU 6760.0067
CYS 6770.0065
ASN 6780.0081
THR 6790.0093
PRO 6800.0113
PRO 6810.0156
HIS 6820.0154
TYR 6830.0118
HIS 6840.0129
GLY 6850.0128
PHE 6860.0109
PRO 6870.0089
VAL 6880.0054
ARG 6890.0076
LEU 6900.0092
PHE 6910.0064
ASP 6920.0055
THR 6930.0023
SER 6940.0023
SER 6950.0030
CYS 6960.0035
GLU 10.0392
ALA 20.0305
ALA 30.0262
ALA 40.0235
LYS 50.0173
MET 60.0103
GLN 70.0091
ARG 80.0058
LEU 90.0041
VAL 100.0030
LEU 110.0025
LEU 120.0010
LEU 130.0029
ALA 140.0045
ILE 150.0038
SER 160.0063
LEU 170.0097
LEU 180.0082
LEU 190.0084
TYR 200.0128
GLN 210.0153
ASP 220.0145
LEU 230.0172
PRO 240.0210
VAL 250.0221
ARG 260.0147
SER 270.0193
GLU 280.0221
PHE 290.0376
GLU 300.0317
LEU 310.0106
ASP 320.0091
ARG 330.0137
ILE 340.0065
CYS 350.0064
GLY 360.0079
TYR 370.0107
GLY 380.0066
THR 390.0024
ALA 400.0042
ARG 410.0053
CYS 420.0060
ARG 430.0061
LYS 440.0068
LYS 450.0065
CYS 460.0080
ARG 470.0096
SER 480.0108
GLN 490.0112
GLU 500.0096
TYR 510.0085
ARG 520.0073
ILE 530.0073
GLY 540.0062
ARG 550.0054
CYS 560.0079
PRO 570.0095
ASN 580.0084
THR 590.0073
TYR 600.0062
ALA 610.0066
CYS 620.0061
CYS 630.0079
LEU 640.0083
ARG 650.0100
LYS 660.0133
TRP 670.0113
ASP 680.0126
GLU 690.0138
SER 700.0163
LEU 710.0125
LEU 720.0112
ASN 730.0122
ARG 740.0143
THR 750.0134
LYS 760.0109
PRO 770.0104
GLU 780.0135
ALA 790.0086
ALA 800.0093
ALA 810.0197
LYS 820.0175
LYS 830.0150
GLU 840.0128
MET 850.0102
ASN 860.0067
LEU 870.0046
SER 880.0030
VAL 890.0026
GLY 900.0038
LEU 910.0073
GLY 920.0135
GLY 930.0213
GLY 940.0207
SER 950.0165
ASN 960.0065
LEU 970.0067
SER 980.0059
VAL 990.0073
GLY 1000.0091
LEU 1010.0093
GLY 1020.0101
GLU 1030.0077
ILE 1040.0035
GLY 1050.0051
GLY 1060.0206
GLY 1070.0177
SER 1080.0162
LYS 1090.0090
LEU 1100.0080
LEU 1110.0087
ASP 1120.0084
ILE 1130.0061
ASN 1140.0076
LEU 1150.0070
GLY 1160.0245
ARG 1170.0324
GLY 1180.0285
GLY 1190.0228
GLY 1200.0136
SER 1210.0046
MET 1220.0046
VAL 1230.0033
ASP 1240.0026
LEU 1250.0019
THR 1260.0024
PHE 1270.0045
GLY 1280.0063
GLY 1290.0083
VAL 1300.0105
GLY 1310.0075
GLY 1320.0089
GLY 1330.0084
SER 1340.0095
THR 1350.0097
PHE 1360.0082
THR 1370.0087
PHE 1380.0077
PHE 1390.0111
PRO 1400.0134
LEU 1410.0136
VAL 1420.0285
ILE 1430.0393
GLY 1440.0566
GLY 1450.0735
GLY 1460.0591
SER 1470.0405
ASP 1480.0205
ALA 1490.0165
MET 1500.0048
TYR 1510.0091
LEU 1520.0052
GLY 1530.0039
PHE 1540.0034
ALA 1550.0045
ALA 1560.0121
GLY 1570.0131
GLY 1580.0128
GLY 1590.0099
SER 1600.0058
ALA 1610.0054
GLY 1620.0059
GLY 1630.0054
GLU 1640.0048
ASN 1650.0037
HIS 1660.0023
VAL 1670.0032
ALA 1680.0039
PHE 1690.0050
GLY 1700.0055
PRO 1710.0255
GLY 1720.0260
PRO 1730.0241
GLY 1740.0139
VAL 1750.0050
ASP 1760.0028
LEU 1770.0012
THR 1780.0025
PHE 1790.0022
GLY 1800.0048
GLY 1810.0078
VAL 1820.0073
GLN 1830.0062
PHE 1840.0049
ALA 1850.0050
MET 1860.0106
VAL 1870.0150
ASN 1880.0068
ASN 1890.0102
GLY 1900.0047
PRO 1910.0161
GLY 1920.0116
PRO 1930.0194
GLY 1940.0190
GLU 1950.0128
SER 1960.0318
PHE 1970.0238
THR 1980.0307
ALA 1990.0386
GLN 2000.0118
PRO 2010.0071
ALA 2020.0265
ASP 2030.0313
MET 2040.0431
GLN 2050.0596
ALA 2060.0363
GLY 2070.0220
ILE 2080.0466
LYS 2090.0447
GLY 2100.0422
PRO 2110.0570
GLY 2120.0291
PRO 2130.0078
GLY 2140.0093
GLY 2150.0292
SER 2160.0136
ILE 2170.0327
GLN 2180.0146
VAL 2190.0225
ILE 2200.0229
ASN 2210.0107
GLY 2220.0105
SER 2230.0110
THR 2240.0107
ILE 2250.0108
GLY 2260.0115
THR 2270.0141
GLY 2280.0121
SER 2290.0145
LYS 2300.0097
LYS 2310.0077
THR 2320.0104
ILE 2330.0062
LEU 2340.0159
ILE 2350.0157
TYR 2360.0172
SER 2370.0115
ILE 2380.0083
ILE 2390.0027
GLY 2400.0077
VAL 2410.0151
LYS 2420.0148
LYS 2430.0119
GLY 2440.0112
THR 2450.0139
LEU 2460.0140
ALA 2470.0063
TRP 2480.0090
ALA 2490.0098
ARG 2500.0179
THR 2510.0250
GLY 2520.0191
PHE 2530.0149
SER 2540.0115
PRO 2550.0116
ALA 2560.0156
LYS 2570.0136
LYS 2580.0068
LEU 2590.0144
ASN 2600.0184
ALA 2610.0184
GLY 2620.0119
VAL 2630.0108
VAL 2640.0041
ARG 2650.0066
VAL 2660.0032
PHE 2670.0042
PHE 2680.0043
LEU 2690.0059
ASN 2700.0073
GLN 2710.0100
LYS 2720.0073
LYS 2730.0041
ALA 2740.0046
LYS 2750.0049
ASP 2760.0055
VAL 2770.0028
LEU 2780.0070
ARG 2790.0105
LYS 2800.0092
THR 2810.0031
SER 2820.0027
ARG 2830.0047
PRO 2840.0084
MET 2850.0096
VAL 2860.0121
ASP 2870.0076
LEU 2880.0022
THR 2890.0043
PHE 2900.0118
GLY 2910.0079
GLY 2920.0177

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.