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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 70  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0781
THR 260.0014
LYS 270.0023
CYS 280.0028
THR 290.0028
VAL 300.0038
SER 310.0045
HIS 320.0049
GLU 330.0041
VAL 340.0039
ALA 350.0034
ASP 360.0031
CYS 370.0033
SER 380.0032
HIS 390.0027
LEU 400.0023
LYS 410.0055
LEU 420.0061
THR 430.0075
GLN 440.0074
VAL 450.0064
PRO 460.0072
ASP 470.0076
ASP 480.0077
LEU 490.0062
PRO 500.0060
THR 510.0055
ASN 520.0046
ILE 530.0037
THR 540.0027
VAL 550.0023
LEU 560.0036
ASN 570.0034
LEU 580.0041
THR 590.0040
HIS 600.0042
ASN 610.0054
GLN 620.0066
LEU 630.0061
ARG 640.0070
ARG 650.0062
LEU 660.0062
PRO 670.0067
ALA 680.0056
ALA 690.0065
ASN 700.0061
PHE 710.0052
THR 720.0055
ARG 730.0058
TYR 740.0043
SER 750.0034
GLN 760.0028
LEU 770.0018
THR 780.0004
SER 790.0013
LEU 800.0026
ASP 810.0032
VAL 820.0038
GLY 830.0042
PHE 840.0046
ASN 850.0051
THR 860.0060
ILE 870.0055
SER 880.0061
LYS 890.0055
LEU 900.0046
GLU 910.0054
PRO 920.0045
GLU 930.0037
LEU 940.0034
CYS 950.0027
GLN 960.0022
LYS 970.0026
LEU 980.0018
PRO 990.0008
MET 1000.0009
LEU 1010.0021
LYS 1020.0028
VAL 1030.0031
LEU 1040.0034
ASN 1050.0038
LEU 1060.0037
GLN 1070.0041
HIS 1080.0046
ASN 1090.0047
GLU 1100.0055
LEU 1110.0049
SER 1120.0052
GLN 1130.0053
LEU 1140.0053
SER 1150.0054
ASP 1160.0062
LYS 1170.0057
THR 1180.0053
PHE 1190.0052
ALA 1200.0054
PHE 1210.0046
CYS 1220.0045
THR 1230.0048
ASN 1240.0043
LEU 1250.0045
THR 1260.0046
GLU 1270.0044
LEU 1280.0045
HIS 1290.0043
LEU 1300.0044
MET 1310.0040
SER 1320.0040
ASN 1330.0041
SER 1340.0042
ILE 1350.0044
GLN 1360.0036
LYS 1370.0039
ILE 1380.0042
LYS 1390.0048
ASN 1400.0053
ASN 1410.0057
PRO 1420.0056
PHE 1430.0055
VAL 1440.0057
LYS 1450.0059
GLN 1460.0055
LYS 1470.0056
ASN 1480.0054
LEU 1490.0051
ILE 1500.0049
THR 1510.0043
LEU 1520.0042
ASP 1530.0041
LEU 1540.0040
SER 1550.0038
HIS 1560.0036
ASN 1570.0038
GLY 1580.0036
LEU 1590.0028
SER 1600.0022
SER 1610.0030
THR 1620.0023
LYS 1630.0026
LEU 1640.0037
GLY 1650.0040
THR 1660.0043
GLN 1670.0045
VAL 1680.0044
GLN 1690.0048
LEU 1700.0048
GLU 1710.0045
ASN 1720.0048
LEU 1730.0041
GLN 1740.0036
GLU 1750.0033
LEU 1760.0026
LEU 1770.0029
LEU 1780.0027
SER 1790.0030
ASN 1800.0037
ASN 1810.0039
LYS 1820.0043
ILE 1830.0032
GLN 1840.0041
ALA 1850.0037
LEU 1860.0037
LYS 1870.0034
SER 1880.0026
GLU 1890.0018
GLU 1900.0018
LEU 1910.0011
ASP 1920.0005
ILE 1930.0019
PHE 1940.0021
ALA 1950.0024
ASN 1960.0034
SER 1970.0028
SER 1980.0026
LEU 1990.0016
LYS 2000.0015
LYS 2010.0012
LEU 2020.0011
GLU 2030.0020
LEU 2040.0026
SER 2050.0033
SER 2060.0044
ASN 2070.0045
GLN 2080.0057
ILE 2090.0051
LYS 2100.0066
GLU 2110.0066
PHE 2120.0057
SER 2130.0059
PRO 2140.0062
GLY 2150.0054
CYS 2160.0042
PHE 2170.0032
HIS 2180.0037
ALA 2190.0022
ILE 2200.0012
GLY 2210.0020
ARG 2220.0018
LEU 2230.0010
PHE 2240.0009
GLY 2250.0014
LEU 2260.0021
PHE 2270.0027
LEU 2280.0038
ASN 2290.0042
ASN 2300.0053
VAL 2310.0060
GLN 2320.0069
LEU 2330.0066
GLY 2340.0067
PRO 2350.0066
SER 2360.0077
LEU 2370.0073
THR 2380.0064
GLU 2390.0069
LYS 2400.0073
LEU 2410.0061
CYS 2420.0058
LEU 2430.0066
GLU 2440.0061
LEU 2450.0053
ALA 2460.0059
ASN 2470.0057
THR 2480.0045
SER 2490.0034
ILE 2500.0028
ARG 2510.0026
ASN 2520.0025
LEU 2530.0031
SER 2540.0034
LEU 2550.0040
SER 2560.0039
ASN 2570.0049
SER 2580.0054
GLN 2590.0057
LEU 2600.0051
SER 2610.0043
THR 2620.0041
THR 2630.0044
SER 2640.0048
ASN 2650.0055
THR 2660.0062
THR 2670.0058
PHE 2680.0055
LEU 2690.0060
GLY 2700.0063
LEU 2710.0051
LYS 2720.0054
TRP 2730.0057
THR 2740.0049
ASN 2750.0044
LEU 2760.0043
THR 2770.0039
MET 2780.0036
LEU 2790.0036
ASP 2800.0035
LEU 2810.0027
SER 2820.0026
TYR 2830.0032
ASN 2840.0034
ASN 2850.0035
LEU 2860.0028
ASN 2870.0020
VAL 2880.0024
VAL 2890.0033
GLY 2900.0043
ASN 2910.0049
ASP 2920.0059
SER 2930.0053
PHE 2940.0055
ALA 2950.0068
TRP 2960.0059
LEU 2970.0055
PRO 2980.0058
GLN 2990.0057
LEU 3000.0050
GLU 3010.0050
TYR 3020.0042
PHE 3030.0036
PHE 3040.0029
LEU 3050.0023
GLU 3060.0015
TYR 3070.0020
ASN 3080.0018
ASN 3090.0019
ILE 3100.0015
GLN 3110.0029
HIS 3120.0039
LEU 3130.0042
PHE 3140.0058
SER 3150.0071
HIS 3160.0067
SER 3170.0053
LEU 3180.0052
HIS 3190.0068
GLY 3200.0076
LEU 3210.0061
PHE 3220.0070
ASN 3230.0067
VAL 3240.0051
ARG 3250.0044
TYR 3260.0033
LEU 3270.0027
ASN 3280.0018
LEU 3290.0012
LYS 3300.0013
ARG 3310.0010
SER 3320.0007
PHE 3330.0018
THR 3340.0027
LYS 3350.0036
GLN 3360.0075
SER 3370.0091
ILE 3380.0121
SER 3390.0132
LEU 3400.0103
ALA 3410.0091
SER 3420.0066
LEU 3430.0066
PRO 3440.0047
LYS 3450.0061
ILE 3460.0059
ASP 3470.0074
ASP 3480.0086
PHE 3490.0082
SER 3500.0066
PHE 3510.0054
GLN 3520.0070
TRP 3530.0072
LEU 3540.0058
LYS 3550.0065
CYS 3560.0057
LEU 3570.0040
GLU 3580.0029
HIS 3590.0018
LEU 3600.0009
ASN 3610.0009
MET 3620.0016
GLU 3630.0024
ASP 3640.0033
ASN 3650.0034
ASP 3660.0057
ILE 3670.0059
PRO 3680.0077
GLY 3690.0080
ILE 3700.0074
LYS 3710.0087
SER 3720.0091
ASN 3730.0083
MET 3740.0066
PHE 3750.0051
THR 3760.0065
GLY 3770.0064
LEU 3780.0045
ILE 3790.0049
ASN 3800.0039
LEU 3810.0017
LYS 3820.0009
TYR 3830.0015
LEU 3840.0018
SER 3850.0032
LEU 3860.0040
SER 3870.0052
ASN 3880.0063
SER 3890.0055
PHE 3900.0068
THR 3910.0083
SER 3920.0087
LEU 3930.0079
ARG 3940.0088
THR 3950.0083
LEU 3960.0076
THR 3970.0075
ASN 3980.0064
GLU 3990.0062
THR 4000.0061
PHE 4010.0054
VAL 4020.0055
SER 4030.0050
LEU 4040.0033
ALA 4050.0031
HIS 4060.0035
SER 4070.0020
PRO 4080.0003
LEU 4090.0014
HIS 4100.0031
ILE 4110.0040
LEU 4120.0044
ASN 4130.0055
LEU 4140.0062
THR 4150.0073
LYS 4160.0083
ASN 4170.0078
LYS 4180.0090
ILE 4190.0079
SER 4200.0087
LYS 4210.0081
ILE 4220.0071
GLU 4230.0068
SER 4240.0061
ASP 4250.0051
ALA 4260.0062
PHE 4270.0051
SER 4280.0041
TRP 4290.0032
LEU 4300.0032
GLY 4310.0035
HIS 4320.0035
LEU 4330.0045
GLU 4340.0054
VAL 4350.0061
LEU 4360.0063
ASP 4370.0069
LEU 4380.0071
GLY 4390.0078
LEU 4400.0083
ASN 4410.0086
GLU 4420.0087
ILE 4430.0078
GLY 4440.0080
GLN 4450.0073
GLU 4460.0064
LEU 4470.0065
THR 4480.0065
GLY 4490.0067
GLN 4500.0069
GLU 4510.0064
TRP 4520.0063
ARG 4530.0058
GLY 4540.0054
LEU 4550.0057
GLU 4560.0056
ASN 4570.0056
ILE 4580.0059
PHE 4590.0063
GLU 4600.0066
ILE 4610.0067
TYR 4620.0069
LEU 4630.0068
SER 4640.0070
TYR 4650.0071
ASN 4660.0073
LYS 4670.0071
TYR 4680.0066
LEU 4690.0063
GLN 4700.0061
LEU 4710.0065
THR 4720.0069
ARG 4730.0069
ASN 4740.0071
SER 4750.0069
PHE 4760.0067
ALA 4770.0068
LEU 4780.0068
VAL 4790.0067
PRO 4800.0067
SER 4810.0065
LEU 4820.0062
GLN 4830.0062
ARG 4840.0061
LEU 4850.0059
MET 4860.0060
LEU 4870.0058
ARG 4880.0055
ARG 4890.0054
VAL 4900.0056
ALA 4910.0059
LEU 4920.0058
LYS 4930.0057
ASN 4940.0056
VAL 4950.0056
ASP 4960.0052
SER 4970.0060
SER 4980.0059
PRO 4990.0059
SER 5000.0055
PRO 5010.0057
PHE 5020.0055
GLN 5030.0056
PRO 5040.0060
LEU 5050.0059
ARG 5060.0050
ASN 5070.0050
LEU 5080.0048
THR 5090.0046
ILE 5100.0045
LEU 5110.0047
ASP 5120.0042
LEU 5130.0036
SER 5140.0033
ASN 5150.0034
ASN 5160.0040
ASN 5170.0044
ILE 5180.0036
ALA 5190.0049
ASN 5200.0038
ILE 5210.0034
ASN 5220.0031
ASP 5230.0032
ASP 5240.0038
MET 5250.0038
LEU 5260.0040
GLU 5270.0044
GLY 5280.0049
LEU 5290.0047
GLU 5300.0048
LYS 5310.0044
LEU 5320.0040
GLU 5330.0039
ILE 5340.0036
LEU 5350.0035
ASP 5360.0029
LEU 5370.0025
GLN 5380.0027
HIS 5390.0036
ASN 5400.0037
ASN 5410.0057
LEU 5420.0051
ALA 5430.0069
ARG 5440.0074
LEU 5450.0062
TRP 5460.0076
LYS 5470.0093
HIS 5480.0106
ALA 5490.0112
ASN 5500.0096
PRO 5510.0104
GLY 5520.0098
GLY 5530.0099
PRO 5540.0080
ILE 5550.0058
TYR 5560.0052
PHE 5570.0040
LEU 5580.0043
LYS 5590.0055
GLY 5600.0062
LEU 5610.0042
SER 5620.0045
HIS 5630.0042
LEU 5640.0037
HIS 5650.0035
ILE 5660.0039
LEU 5670.0039
ASN 5680.0036
LEU 5690.0039
GLU 5700.0041
SER 5710.0056
ASN 5720.0057
GLY 5730.0072
PHE 5740.0075
ASP 5750.0091
GLU 5760.0089
ILE 5770.0083
PRO 5780.0086
VAL 5790.0089
GLU 5800.0083
VAL 5810.0055
PHE 5820.0054
LYS 5830.0062
ASP 5840.0056
LEU 5850.0047
PHE 5860.0022
GLU 5870.0027
LEU 5880.0033
LYS 5890.0042
ILE 5900.0049
ILE 5910.0056
ASP 5920.0054
LEU 5930.0060
GLY 5940.0058
LEU 5950.0061
ASN 5960.0080
ASN 5970.0086
LEU 5980.0086
ASN 5990.0089
THR 6000.0093
LEU 6010.0087
PRO 6020.0092
ALA 6030.0092
SER 6040.0088
VAL 6050.0085
PHE 6060.0060
ASN 6070.0060
ASN 6080.0052
GLN 6090.0052
VAL 6100.0051
SER 6110.0055
LEU 6120.0059
LYS 6130.0066
SER 6140.0069
LEU 6150.0067
ASN 6160.0074
LEU 6170.0075
GLN 6180.0070
LYS 6190.0072
ASN 6200.0077
LEU 6210.0086
ILE 6220.0077
THR 6230.0066
SER 6240.0066
VAL 6250.0068
GLU 6260.0069
LYS 6270.0075
LYS 6280.0086
VAL 6290.0088
PHE 6300.0080
GLY 6310.0070
PRO 6320.0072
ALA 6330.0075
PHE 6340.0077
ARG 6350.0079
ASN 6360.0075
LEU 6370.0075
THR 6380.0081
GLU 6390.0079
LEU 6400.0073
ASP 6410.0073
MET 6420.0068
ARG 6430.0062
PHE 6440.0065
ASN 6450.0064
PRO 6460.0074
PHE 6470.0045
ASP 6480.0032
CYS 6490.0021
THR 6500.0025
CYS 6510.0047
GLU 6520.0048
SER 6530.0042
ILE 6540.0038
ALA 6550.0062
TRP 6560.0059
PHE 6570.0051
VAL 6580.0042
ASN 6590.0060
TRP 6600.0066
ILE 6610.0048
ASN 6620.0051
GLU 6630.0070
THR 6640.0065
HIS 6650.0058
THR 6660.0073
ASN 6670.0070
ILE 6680.0060
PRO 6690.0059
GLU 6700.0049
LEU 6710.0033
SER 6720.0015
SER 6730.0035
HIS 6740.0048
TYR 6750.0035
LEU 6760.0054
CYS 6770.0055
ASN 6780.0090
THR 6790.0085
PRO 6800.0092
PRO 6810.0150
HIS 6820.0151
TYR 6830.0109
HIS 6840.0126
GLY 6850.0116
PHE 6860.0084
PRO 6870.0050
VAL 6880.0022
ARG 6890.0033
LEU 6900.0064
PHE 6910.0070
ASP 6920.0118
THR 6930.0128
SER 6940.0187
SER 6950.0182
CYS 6960.0169
GLU 10.0110
ALA 20.0115
ALA 30.0113
ALA 40.0091
LYS 50.0082
MET 60.0096
GLN 70.0089
ARG 80.0063
LEU 90.0075
VAL 100.0088
LEU 110.0062
LEU 120.0047
LEU 130.0055
ALA 140.0050
ILE 150.0029
SER 160.0030
LEU 170.0052
LEU 180.0096
LEU 190.0090
TYR 200.0139
GLN 210.0214
ASP 220.0267
LEU 230.0294
PRO 240.0356
VAL 250.0315
ARG 260.0127
SER 270.0058
GLU 280.0177
PHE 290.0182
GLU 300.0081
LEU 310.0084
ASP 320.0117
ARG 330.0104
ILE 340.0062
CYS 350.0067
GLY 360.0067
TYR 370.0079
GLY 380.0043
THR 390.0015
ALA 400.0015
ARG 410.0042
CYS 420.0045
ARG 430.0040
LYS 440.0034
LYS 450.0026
CYS 460.0044
ARG 470.0084
SER 480.0114
GLN 490.0120
GLU 500.0081
TYR 510.0065
ARG 520.0041
ILE 530.0043
GLY 540.0044
ARG 550.0046
CYS 560.0069
PRO 570.0098
ASN 580.0083
THR 590.0059
TYR 600.0035
ALA 610.0017
CYS 620.0016
CYS 630.0026
LEU 640.0044
ARG 650.0083
LYS 660.0152
TRP 670.0160
ASP 680.0134
GLU 690.0113
SER 700.0109
LEU 710.0115
LEU 720.0094
ASN 730.0040
ARG 740.0060
THR 750.0060
LYS 760.0032
PRO 770.0107
GLU 780.0303
ALA 790.0300
ALA 800.0225
ALA 810.0243
LYS 820.0223
LYS 830.0192
GLU 840.0236
MET 850.0197
ASN 860.0163
LEU 870.0147
SER 880.0150
VAL 890.0143
GLY 900.0182
LEU 910.0243
GLY 920.0476
GLY 930.0753
GLY 940.0781
SER 950.0561
ASN 960.0242
LEU 970.0161
SER 980.0129
VAL 990.0125
GLY 1000.0172
LEU 1010.0220
GLY 1020.0278
GLU 1030.0281
ILE 1040.0317
GLY 1050.0322
GLY 1060.0296
GLY 1070.0261
SER 1080.0223
LYS 1090.0183
LEU 1100.0160
LEU 1110.0089
ASP 1120.0056
ILE 1130.0045
ASN 1140.0103
LEU 1150.0093
GLY 1160.0118
ARG 1170.0137
GLY 1180.0108
GLY 1190.0174
GLY 1200.0180
SER 1210.0169
MET 1220.0163
VAL 1230.0116
ASP 1240.0111
LEU 1250.0085
THR 1260.0057
PHE 1270.0066
GLY 1280.0077
GLY 1290.0115
VAL 1300.0142
GLY 1310.0172
GLY 1320.0173
GLY 1330.0150
SER 1340.0138
THR 1350.0120
PHE 1360.0174
THR 1370.0180
PHE 1380.0166
PHE 1390.0183
PRO 1400.0177
LEU 1410.0196
VAL 1420.0181
ILE 1430.0245
GLY 1440.0289
GLY 1450.0341
GLY 1460.0429
SER 1470.0378
ASP 1480.0285
ALA 1490.0272
MET 1500.0195
TYR 1510.0171
LEU 1520.0160
GLY 1530.0179
PHE 1540.0175
ALA 1550.0196
ALA 1560.0187
GLY 1570.0157
GLY 1580.0139
GLY 1590.0074
SER 1600.0070
ALA 1610.0088
GLY 1620.0083
GLY 1630.0084
GLU 1640.0083
ASN 1650.0090
HIS 1660.0051
VAL 1670.0073
ALA 1680.0102
PHE 1690.0166
GLY 1700.0205
PRO 1710.0465
GLY 1720.0458
PRO 1730.0435
GLY 1740.0255
VAL 1750.0148
ASP 1760.0047
LEU 1770.0080
THR 1780.0108
PHE 1790.0202
GLY 1800.0280
GLY 1810.0388
VAL 1820.0391
GLN 1830.0270
PHE 1840.0245
ALA 1850.0166
MET 1860.0183
VAL 1870.0147
ASN 1880.0068
ASN 1890.0198
GLY 1900.0072
PRO 1910.0671
GLY 1920.0437
PRO 1930.0179
GLY 1940.0196
GLU 1950.0240
SER 1960.0368
PHE 1970.0256
THR 1980.0169
ALA 1990.0105
GLN 2000.0047
PRO 2010.0069
ALA 2020.0102
ASP 2030.0148
MET 2040.0114
GLN 2050.0044
ALA 2060.0146
GLY 2070.0162
ILE 2080.0184
LYS 2090.0191
GLY 2100.0252
PRO 2110.0162
GLY 2120.0077
PRO 2130.0056
GLY 2140.0136
GLY 2150.0161
SER 2160.0270
ILE 2170.0217
GLN 2180.0230
VAL 2190.0218
ILE 2200.0207
ASN 2210.0356
GLY 2220.0269
SER 2230.0189
THR 2240.0144
ILE 2250.0046
GLY 2260.0115
THR 2270.0116
GLY 2280.0099
SER 2290.0098
LYS 2300.0080
LYS 2310.0059
THR 2320.0045
ILE 2330.0107
LEU 2340.0145
ILE 2350.0205
TYR 2360.0244
SER 2370.0241
ILE 2380.0196
ILE 2390.0163
GLY 2400.0151
VAL 2410.0201
LYS 2420.0148
LYS 2430.0075
GLY 2440.0079
THR 2450.0107
LEU 2460.0053
ALA 2470.0010
TRP 2480.0062
ALA 2490.0101
ARG 2500.0141
THR 2510.0206
GLY 2520.0158
PHE 2530.0095
SER 2540.0050
PRO 2550.0091
ALA 2560.0133
LYS 2570.0148
LYS 2580.0188
LEU 2590.0210
ASN 2600.0249
ALA 2610.0165
GLY 2620.0128
VAL 2630.0063
VAL 2640.0130
ARG 2650.0140
VAL 2660.0239
PHE 2670.0123
PHE 2680.0145
LEU 2690.0105
ASN 2700.0117
GLN 2710.0201
LYS 2720.0149
LYS 2730.0143
ALA 2740.0243
LYS 2750.0267
ASP 2760.0211
VAL 2770.0262
LEU 2780.0329
ARG 2790.0256
LYS 2800.0187
THR 2810.0254
SER 2820.0091
ARG 2830.0141
PRO 2840.0253
MET 2850.0243
VAL 2860.0380
ASP 2870.0288
LEU 2880.0150
THR 2890.0148
PHE 2900.0216
GLY 2910.0157
GLY 2920.0363

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.