CNRS Nantes University US2B US2B
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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0597
THR 260.0072
LYS 270.0084
CYS 280.0090
THR 290.0083
VAL 300.0093
SER 310.0111
HIS 320.0113
GLU 330.0101
VAL 340.0100
ALA 350.0094
ASP 360.0090
CYS 370.0093
SER 380.0086
HIS 390.0074
LEU 400.0078
LYS 410.0112
LEU 420.0108
THR 430.0109
GLN 440.0105
VAL 450.0099
PRO 460.0121
ASP 470.0116
ASP 480.0124
LEU 490.0108
PRO 500.0096
THR 510.0084
ASN 520.0075
ILE 530.0073
THR 540.0067
VAL 550.0074
LEU 560.0076
ASN 570.0075
LEU 580.0083
THR 590.0080
HIS 600.0083
ASN 610.0100
GLN 620.0102
LEU 630.0084
ARG 640.0083
ARG 650.0063
LEU 660.0082
PRO 670.0077
ALA 680.0061
ALA 690.0072
ASN 700.0078
PHE 710.0070
THR 720.0069
ARG 730.0079
TYR 740.0066
SER 750.0055
GLN 760.0053
LEU 770.0048
THR 780.0055
SER 790.0056
LEU 800.0053
ASP 810.0038
VAL 820.0047
GLY 830.0053
PHE 840.0064
ASN 850.0067
THR 860.0092
ILE 870.0083
SER 880.0083
LYS 890.0074
LEU 900.0070
GLU 910.0079
PRO 920.0074
GLU 930.0061
LEU 940.0063
CYS 950.0067
GLN 960.0056
LYS 970.0053
LEU 980.0054
PRO 990.0061
MET 1000.0061
LEU 1010.0071
LYS 1020.0074
VAL 1030.0071
LEU 1040.0066
ASN 1050.0066
LEU 1060.0067
GLN 1070.0067
HIS 1080.0072
ASN 1090.0077
GLU 1100.0085
LEU 1110.0098
SER 1120.0101
GLN 1130.0104
LEU 1140.0098
SER 1150.0101
ASP 1160.0102
LYS 1170.0103
THR 1180.0099
PHE 1190.0091
ALA 1200.0092
PHE 1210.0081
CYS 1220.0081
THR 1230.0084
ASN 1240.0082
LEU 1250.0084
THR 1260.0083
GLU 1270.0084
LEU 1280.0083
HIS 1290.0084
LEU 1300.0083
MET 1310.0080
SER 1320.0083
ASN 1330.0086
SER 1340.0084
ILE 1350.0081
GLN 1360.0076
LYS 1370.0074
ILE 1380.0074
LYS 1390.0086
ASN 1400.0091
ASN 1410.0090
PRO 1420.0092
PHE 1430.0084
VAL 1440.0085
LYS 1450.0091
GLN 1460.0086
LYS 1470.0081
ASN 1480.0082
LEU 1490.0080
ILE 1500.0077
THR 1510.0077
LEU 1520.0074
ASP 1530.0079
LEU 1540.0072
SER 1550.0079
HIS 1560.0087
ASN 1570.0079
GLY 1580.0069
LEU 1590.0048
SER 1600.0038
SER 1610.0058
THR 1620.0050
LYS 1630.0035
LEU 1640.0047
GLY 1650.0054
THR 1660.0066
GLN 1670.0075
VAL 1680.0066
GLN 1690.0065
LEU 1700.0061
GLU 1710.0054
ASN 1720.0056
LEU 1730.0054
GLN 1740.0055
GLU 1750.0066
LEU 1760.0053
LEU 1770.0072
LEU 1780.0069
SER 1790.0094
ASN 1800.0109
ASN 1810.0106
LYS 1820.0108
ILE 1830.0091
GLN 1840.0108
ALA 1850.0097
LEU 1860.0096
LYS 1870.0084
SER 1880.0074
GLU 1890.0055
GLU 1900.0045
LEU 1910.0042
ASP 1920.0041
ILE 1930.0033
PHE 1940.0030
ALA 1950.0050
ASN 1960.0051
SER 1970.0035
SER 1980.0032
LEU 1990.0040
LYS 2000.0051
LYS 2010.0065
LEU 2020.0070
GLU 2030.0090
LEU 2040.0100
SER 2050.0122
SER 2060.0143
ASN 2070.0137
GLN 2080.0158
ILE 2090.0141
LYS 2100.0165
GLU 2110.0156
PHE 2120.0136
SER 2130.0132
PRO 2140.0135
GLY 2150.0114
CYS 2160.0100
PHE 2170.0086
HIS 2180.0084
ALA 2190.0065
ILE 2200.0049
GLY 2210.0049
ARG 2220.0048
LEU 2230.0057
PHE 2240.0060
GLY 2250.0078
LEU 2260.0091
PHE 2270.0105
LEU 2280.0121
ASN 2290.0130
ASN 2300.0149
VAL 2310.0154
GLN 2320.0168
LEU 2330.0158
GLY 2340.0160
PRO 2350.0153
SER 2360.0175
LEU 2370.0164
THR 2380.0142
GLU 2390.0148
LYS 2400.0153
LEU 2410.0140
CYS 2420.0131
LEU 2430.0140
GLU 2440.0131
LEU 2450.0112
ALA 2460.0115
ASN 2470.0102
THR 2480.0087
SER 2490.0065
ILE 2500.0072
ARG 2510.0061
ASN 2520.0071
LEU 2530.0084
SER 2540.0095
LEU 2550.0107
SER 2560.0097
ASN 2570.0114
SER 2580.0120
GLN 2590.0122
LEU 2600.0107
SER 2610.0084
THR 2620.0078
THR 2630.0072
SER 2640.0079
ASN 2650.0080
THR 2660.0124
THR 2670.0116
PHE 2680.0101
LEU 2690.0111
GLY 2700.0114
LEU 2710.0096
LYS 2720.0096
TRP 2730.0099
THR 2740.0080
ASN 2750.0057
LEU 2760.0055
THR 2770.0045
MET 2780.0054
LEU 2790.0061
ASP 2800.0070
LEU 2810.0047
SER 2820.0051
TYR 2830.0057
ASN 2840.0053
ASN 2850.0045
LEU 2860.0032
ASN 2870.0023
VAL 2880.0020
VAL 2890.0018
GLY 2900.0024
ASN 2910.0036
ASP 2920.0046
SER 2930.0051
PHE 2940.0047
ALA 2950.0053
TRP 2960.0077
LEU 2970.0059
PRO 2980.0051
GLN 2990.0040
LEU 3000.0037
GLU 3010.0031
TYR 3020.0040
PHE 3030.0036
PHE 3040.0044
LEU 3050.0039
GLU 3060.0041
TYR 3070.0039
ASN 3080.0030
ASN 3090.0027
ILE 3100.0022
GLN 3110.0024
HIS 3120.0024
LEU 3130.0024
PHE 3140.0023
SER 3150.0027
HIS 3160.0026
SER 3170.0016
LEU 3180.0015
HIS 3190.0026
GLY 3200.0032
LEU 3210.0023
PHE 3220.0024
ASN 3230.0021
VAL 3240.0023
ARG 3250.0030
TYR 3260.0041
LEU 3270.0036
ASN 3280.0038
LEU 3290.0035
LYS 3300.0039
ARG 3310.0045
SER 3320.0034
PHE 3330.0033
THR 3340.0041
LYS 3350.0048
GLN 3360.0116
SER 3370.0151
ILE 3380.0194
SER 3390.0229
LEU 3400.0202
ALA 3410.0135
SER 3420.0109
LEU 3430.0083
PRO 3440.0051
LYS 3450.0049
ILE 3460.0038
ASP 3470.0037
ASP 3480.0041
PHE 3490.0039
SER 3500.0034
PHE 3510.0032
GLN 3520.0035
TRP 3530.0025
LEU 3540.0023
LYS 3550.0029
CYS 3560.0028
LEU 3570.0031
GLU 3580.0038
HIS 3590.0041
LEU 3600.0042
ASN 3610.0041
MET 3620.0040
GLU 3630.0039
ASP 3640.0039
ASN 3650.0038
ASP 3660.0061
ILE 3670.0052
PRO 3680.0057
GLY 3690.0049
ILE 3700.0038
LYS 3710.0049
SER 3720.0048
ASN 3730.0045
MET 3740.0045
PHE 3750.0042
THR 3760.0045
GLY 3770.0040
LEU 3780.0040
ILE 3790.0041
ASN 3800.0039
LEU 3810.0044
LYS 3820.0045
TYR 3830.0045
LEU 3840.0045
SER 3850.0044
LEU 3860.0045
SER 3870.0045
ASN 3880.0045
SER 3890.0046
PHE 3900.0044
THR 3910.0054
SER 3920.0039
LEU 3930.0033
ARG 3940.0023
THR 3950.0021
LEU 3960.0025
THR 3970.0024
ASN 3980.0025
GLU 3990.0032
THR 4000.0033
PHE 4010.0036
VAL 4020.0038
SER 4030.0043
LEU 4040.0042
ALA 4050.0041
HIS 4060.0043
SER 4070.0043
PRO 4080.0046
LEU 4090.0045
HIS 4100.0048
ILE 4110.0045
LEU 4120.0042
ASN 4130.0042
LEU 4140.0037
THR 4150.0040
LYS 4160.0045
ASN 4170.0039
LYS 4180.0032
ILE 4190.0026
SER 4200.0021
LYS 4210.0022
ILE 4220.0020
GLU 4230.0017
SER 4240.0017
ASP 4250.0019
ALA 4260.0023
PHE 4270.0027
SER 4280.0027
TRP 4290.0033
LEU 4300.0035
GLY 4310.0036
HIS 4320.0040
LEU 4330.0038
GLU 4340.0041
VAL 4350.0041
LEU 4360.0037
ASP 4370.0042
LEU 4380.0037
GLY 4390.0046
LEU 4400.0056
ASN 4410.0051
GLU 4420.0049
ILE 4430.0040
GLY 4440.0041
GLN 4450.0034
GLU 4460.0040
LEU 4470.0028
THR 4480.0022
GLY 4490.0014
GLN 4500.0013
GLU 4510.0016
TRP 4520.0018
ARG 4530.0019
GLY 4540.0028
LEU 4550.0028
GLU 4560.0031
ASN 4570.0036
ILE 4580.0034
PHE 4590.0038
GLU 4600.0039
ILE 4610.0036
TYR 4620.0045
LEU 4630.0044
SER 4640.0055
TYR 4650.0067
ASN 4660.0063
LYS 4670.0069
TYR 4680.0062
LEU 4690.0049
GLN 4700.0047
LEU 4710.0040
THR 4720.0039
ARG 4730.0037
ASN 4740.0025
SER 4750.0020
PHE 4760.0013
ALA 4770.0017
LEU 4780.0020
VAL 4790.0026
PRO 4800.0030
SER 4810.0038
LEU 4820.0034
GLN 4830.0038
ARG 4840.0038
LEU 4850.0032
MET 4860.0039
LEU 4870.0040
ARG 4880.0052
ARG 4890.0066
VAL 4900.0063
ALA 4910.0071
LEU 4920.0056
LYS 4930.0060
ASN 4940.0057
VAL 4950.0043
ASP 4960.0059
SER 4970.0059
SER 4980.0069
PRO 4990.0058
SER 5000.0041
PRO 5010.0021
PHE 5020.0015
GLN 5030.0030
PRO 5040.0031
LEU 5050.0033
ARG 5060.0042
ASN 5070.0049
LEU 5080.0039
THR 5090.0042
ILE 5100.0035
LEU 5110.0019
ASP 5120.0027
LEU 5130.0026
SER 5140.0039
ASN 5150.0056
ASN 5160.0057
ASN 5170.0061
ILE 5180.0055
ALA 5190.0066
ASN 5200.0067
ILE 5210.0050
ASN 5220.0061
ASP 5230.0067
ASP 5240.0062
MET 5250.0042
LEU 5260.0038
GLU 5270.0053
GLY 5280.0059
LEU 5290.0051
GLU 5300.0067
LYS 5310.0061
LEU 5320.0048
GLU 5330.0052
ILE 5340.0040
LEU 5350.0027
ASP 5360.0019
LEU 5370.0009
GLN 5380.0019
HIS 5390.0033
ASN 5400.0036
ASN 5410.0044
LEU 5420.0040
ALA 5430.0047
ARG 5440.0067
LEU 5450.0066
TRP 5460.0058
LYS 5470.0071
HIS 5480.0094
ALA 5490.0107
ASN 5500.0104
PRO 5510.0142
GLY 5520.0145
GLY 5530.0124
PRO 5540.0091
ILE 5550.0074
TYR 5560.0065
PHE 5570.0052
LEU 5580.0054
LYS 5590.0070
GLY 5600.0077
LEU 5610.0065
SER 5620.0071
HIS 5630.0069
LEU 5640.0059
HIS 5650.0056
ILE 5660.0050
LEU 5670.0040
ASN 5680.0031
LEU 5690.0024
GLU 5700.0021
SER 5710.0018
ASN 5720.0017
GLY 5730.0019
PHE 5740.0024
ASP 5750.0029
GLU 5760.0042
ILE 5770.0047
PRO 5780.0059
VAL 5790.0067
GLU 5800.0071
VAL 5810.0053
PHE 5820.0057
LYS 5830.0066
ASP 5840.0069
LEU 5850.0064
PHE 5860.0050
GLU 5870.0051
LEU 5880.0052
LYS 5890.0050
ILE 5900.0053
ILE 5910.0050
ASP 5920.0045
LEU 5930.0043
GLY 5940.0041
LEU 5950.0035
ASN 5960.0038
ASN 5970.0038
LEU 5980.0040
ASN 5990.0043
THR 6000.0045
LEU 6010.0039
PRO 6020.0041
ALA 6030.0039
SER 6040.0043
VAL 6050.0047
PHE 6060.0044
ASN 6070.0043
ASN 6080.0046
GLN 6090.0045
VAL 6100.0044
SER 6110.0042
LEU 6120.0043
LYS 6130.0042
SER 6140.0044
LEU 6150.0045
ASN 6160.0050
LEU 6170.0050
GLN 6180.0051
LYS 6190.0055
ASN 6200.0054
LEU 6210.0063
ILE 6220.0051
THR 6230.0048
SER 6240.0041
VAL 6250.0031
GLU 6260.0030
LYS 6270.0024
LYS 6280.0036
VAL 6290.0038
PHE 6300.0029
GLY 6310.0026
PRO 6320.0026
ALA 6330.0029
PHE 6340.0024
ARG 6350.0020
ASN 6360.0022
LEU 6370.0026
THR 6380.0029
GLU 6390.0033
LEU 6400.0032
ASP 6410.0045
MET 6420.0043
ARG 6430.0053
PHE 6440.0062
ASN 6450.0054
PRO 6460.0063
PHE 6470.0041
ASP 6480.0036
CYS 6490.0015
THR 6500.0027
CYS 6510.0052
GLU 6520.0066
SER 6530.0047
ILE 6540.0019
ALA 6550.0039
TRP 6560.0026
PHE 6570.0010
VAL 6580.0023
ASN 6590.0035
TRP 6600.0026
ILE 6610.0034
ASN 6620.0044
GLU 6630.0054
THR 6640.0055
HIS 6650.0064
THR 6660.0011
ASN 6670.0027
ILE 6680.0031
PRO 6690.0056
GLU 6700.0067
LEU 6710.0056
SER 6720.0069
SER 6730.0080
HIS 6740.0070
TYR 6750.0049
LEU 6760.0066
CYS 6770.0048
ASN 6780.0066
THR 6790.0058
PRO 6800.0040
PRO 6810.0057
HIS 6820.0041
TYR 6830.0043
HIS 6840.0071
GLY 6850.0091
PHE 6860.0072
PRO 6870.0066
VAL 6880.0040
ARG 6890.0052
LEU 6900.0067
PHE 6910.0058
ASP 6920.0081
THR 6930.0084
SER 6940.0126
SER 6950.0115
CYS 6960.0109
GLU 10.0316
ALA 20.0299
ALA 30.0298
ALA 40.0213
LYS 50.0160
MET 60.0172
GLN 70.0151
ARG 80.0098
LEU 90.0111
VAL 100.0149
LEU 110.0078
LEU 120.0083
LEU 130.0111
ALA 140.0107
ILE 150.0092
SER 160.0162
LEU 170.0216
LEU 180.0210
LEU 190.0205
TYR 200.0328
GLN 210.0422
ASP 220.0432
LEU 230.0493
PRO 240.0594
VAL 250.0597
ARG 260.0155
SER 270.0069
GLU 280.0343
PHE 290.0489
GLU 300.0329
LEU 310.0143
ASP 320.0233
ARG 330.0259
ILE 340.0143
CYS 350.0137
GLY 360.0151
TYR 370.0214
GLY 380.0204
THR 390.0145
ALA 400.0094
ARG 410.0105
CYS 420.0110
ARG 430.0072
LYS 440.0052
LYS 450.0008
CYS 460.0037
ARG 470.0106
SER 480.0164
GLN 490.0162
GLU 500.0089
TYR 510.0078
ARG 520.0064
ILE 530.0094
GLY 540.0117
ARG 550.0122
CYS 560.0164
PRO 570.0220
ASN 580.0176
THR 590.0142
TYR 600.0084
ALA 610.0076
CYS 620.0080
CYS 630.0020
LEU 640.0019
ARG 650.0088
LYS 660.0148
TRP 670.0150
ASP 680.0177
GLU 690.0194
SER 700.0216
LEU 710.0166
LEU 720.0166
ASN 730.0157
ARG 740.0148
THR 750.0147
LYS 760.0166
PRO 770.0169
GLU 780.0171
ALA 790.0172
ALA 800.0184
ALA 810.0259
LYS 820.0268
LYS 830.0198
GLU 840.0230
MET 850.0174
ASN 860.0152
LEU 870.0125
SER 880.0099
VAL 890.0083
GLY 900.0057
LEU 910.0085
GLY 920.0104
GLY 930.0164
GLY 940.0151
SER 950.0145
ASN 960.0117
LEU 970.0125
SER 980.0151
VAL 990.0168
GLY 1000.0201
LEU 1010.0210
GLY 1020.0225
GLU 1030.0275
ILE 1040.0287
GLY 1050.0349
GLY 1060.0305
GLY 1070.0253
SER 1080.0229
LYS 1090.0167
LEU 1100.0133
LEU 1110.0090
ASP 1120.0063
ILE 1130.0046
ASN 1140.0057
LEU 1150.0055
GLY 1160.0083
ARG 1170.0118
GLY 1180.0049
GLY 1190.0059
GLY 1200.0114
SER 1210.0076
MET 1220.0052
VAL 1230.0052
ASP 1240.0072
LEU 1250.0101
THR 1260.0134
PHE 1270.0164
GLY 1280.0180
GLY 1290.0217
VAL 1300.0237
GLY 1310.0211
GLY 1320.0191
GLY 1330.0139
SER 1340.0157
THR 1350.0114
PHE 1360.0149
THR 1370.0132
PHE 1380.0118
PHE 1390.0117
PRO 1400.0100
LEU 1410.0169
VAL 1420.0177
ILE 1430.0235
GLY 1440.0302
GLY 1450.0389
GLY 1460.0429
SER 1470.0334
ASP 1480.0200
ALA 1490.0200
MET 1500.0135
TYR 1510.0138
LEU 1520.0136
GLY 1530.0162
PHE 1540.0166
ALA 1550.0183
ALA 1560.0208
GLY 1570.0169
GLY 1580.0141
GLY 1590.0077
SER 1600.0044
ALA 1610.0068
GLY 1620.0101
GLY 1630.0129
GLU 1640.0161
ASN 1650.0145
HIS 1660.0129
VAL 1670.0107
ALA 1680.0091
PHE 1690.0078
GLY 1700.0079
PRO 1710.0102
GLY 1720.0114
PRO 1730.0138
GLY 1740.0116
VAL 1750.0091
ASP 1760.0096
LEU 1770.0088
THR 1780.0105
PHE 1790.0106
GLY 1800.0124
GLY 1810.0131
VAL 1820.0102
GLN 1830.0106
PHE 1840.0091
ALA 1850.0110
MET 1860.0116
VAL 1870.0108
ASN 1880.0107
ASN 1890.0104
GLY 1900.0150
PRO 1910.0130
GLY 1920.0127
PRO 1930.0119
GLY 1940.0081
GLU 1950.0028
SER 1960.0092
PHE 1970.0031
THR 1980.0107
ALA 1990.0104
GLN 2000.0037
PRO 2010.0051
ALA 2020.0050
ASP 2030.0079
MET 2040.0114
GLN 2050.0146
ALA 2060.0113
GLY 2070.0095
ILE 2080.0211
LYS 2090.0265
GLY 2100.0270
PRO 2110.0329
GLY 2120.0203
PRO 2130.0149
GLY 2140.0133
GLY 2150.0170
SER 2160.0183
ILE 2170.0193
GLN 2180.0167
VAL 2190.0234
ILE 2200.0206
ASN 2210.0375
GLY 2220.0256
SER 2230.0295
THR 2240.0346
ILE 2250.0241
GLY 2260.0185
THR 2270.0100
GLY 2280.0160
SER 2290.0216
LYS 2300.0140
LYS 2310.0094
THR 2320.0067
ILE 2330.0050
LEU 2340.0026
ILE 2350.0032
TYR 2360.0055
SER 2370.0080
ILE 2380.0099
ILE 2390.0097
GLY 2400.0122
VAL 2410.0166
LYS 2420.0130
LYS 2430.0115
GLY 2440.0118
THR 2450.0121
LEU 2460.0100
ALA 2470.0062
TRP 2480.0030
ALA 2490.0047
ARG 2500.0047
THR 2510.0056
GLY 2520.0078
PHE 2530.0051
SER 2540.0078
PRO 2550.0047
ALA 2560.0082
LYS 2570.0138
LYS 2580.0139
LEU 2590.0078
ASN 2600.0111
ALA 2610.0179
GLY 2620.0121
VAL 2630.0078
VAL 2640.0018
ARG 2650.0044
VAL 2660.0132
PHE 2670.0040
PHE 2680.0069
LEU 2690.0093
ASN 2700.0124
GLN 2710.0154
LYS 2720.0129
LYS 2730.0129
ALA 2740.0148
LYS 2750.0143
ASP 2760.0099
VAL 2770.0136
LEU 2780.0189
ARG 2790.0140
LYS 2800.0064
THR 2810.0134
SER 2820.0046
ARG 2830.0065
PRO 2840.0068
MET 2850.0069
VAL 2860.0128
ASP 2870.0107
LEU 2880.0073
THR 2890.0070
PHE 2900.0054
GLY 2910.0078
GLY 2920.0127

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Last modification: april 24th, 2026.