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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 73  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0867
THR 260.0031
LYS 270.0027
CYS 280.0024
THR 290.0021
VAL 300.0025
SER 310.0021
HIS 320.0031
GLU 330.0036
VAL 340.0028
ALA 350.0027
ASP 360.0022
CYS 370.0020
SER 380.0020
HIS 390.0020
LEU 400.0020
LYS 410.0032
LEU 420.0033
THR 430.0039
GLN 440.0038
VAL 450.0033
PRO 460.0043
ASP 470.0052
ASP 480.0057
LEU 490.0051
PRO 500.0058
THR 510.0056
ASN 520.0056
ILE 530.0044
THR 540.0041
VAL 550.0031
LEU 560.0022
ASN 570.0018
LEU 580.0016
THR 590.0016
HIS 600.0019
ASN 610.0025
GLN 620.0030
LEU 630.0023
ARG 640.0023
ARG 650.0018
LEU 660.0018
PRO 670.0021
ALA 680.0022
ALA 690.0031
ASN 700.0034
PHE 710.0032
THR 720.0039
ARG 730.0047
TYR 740.0042
SER 750.0044
GLN 760.0040
LEU 770.0030
THR 780.0032
SER 790.0024
LEU 800.0016
ASP 810.0015
VAL 820.0014
GLY 830.0015
PHE 840.0019
ASN 850.0020
THR 860.0019
ILE 870.0014
SER 880.0014
LYS 890.0014
LEU 900.0016
GLU 910.0015
PRO 920.0023
GLU 930.0025
LEU 940.0023
CYS 950.0028
GLN 960.0030
LYS 970.0029
LEU 980.0029
PRO 990.0036
MET 1000.0036
LEU 1010.0027
LYS 1020.0026
VAL 1030.0020
LEU 1040.0017
ASN 1050.0013
LEU 1060.0011
GLN 1070.0013
HIS 1080.0017
ASN 1090.0014
GLU 1100.0017
LEU 1110.0025
SER 1120.0034
GLN 1130.0039
LEU 1140.0036
SER 1150.0045
ASP 1160.0047
LYS 1170.0047
THR 1180.0035
PHE 1190.0033
ALA 1200.0044
PHE 1210.0041
CYS 1220.0034
THR 1230.0038
ASN 1240.0035
LEU 1250.0027
THR 1260.0019
GLU 1270.0014
LEU 1280.0012
HIS 1290.0012
LEU 1300.0016
MET 1310.0023
SER 1320.0029
ASN 1330.0027
SER 1340.0036
ILE 1350.0037
GLN 1360.0050
LYS 1370.0051
ILE 1380.0044
LYS 1390.0052
ASN 1400.0053
ASN 1410.0041
PRO 1420.0034
PHE 1430.0026
VAL 1440.0032
LYS 1450.0034
GLN 1460.0024
LYS 1470.0024
ASN 1480.0025
LEU 1490.0017
ILE 1500.0019
THR 1510.0017
LEU 1520.0017
ASP 1530.0022
LEU 1540.0027
SER 1550.0034
HIS 1560.0040
ASN 1570.0041
GLY 1580.0047
LEU 1590.0043
SER 1600.0048
SER 1610.0045
THR 1620.0038
LYS 1630.0034
LEU 1640.0028
GLY 1650.0028
THR 1660.0035
GLN 1670.0026
VAL 1680.0019
GLN 1690.0019
LEU 1700.0019
GLU 1710.0019
ASN 1720.0024
LEU 1730.0022
GLN 1740.0030
GLU 1750.0030
LEU 1760.0031
LEU 1770.0034
LEU 1780.0037
SER 1790.0041
ASN 1800.0046
ASN 1810.0046
LYS 1820.0045
ILE 1830.0040
GLN 1840.0040
ALA 1850.0037
LEU 1860.0039
LYS 1870.0038
SER 1880.0038
GLU 1890.0035
GLU 1900.0034
LEU 1910.0034
ASP 1920.0033
ILE 1930.0030
PHE 1940.0032
ALA 1950.0035
ASN 1960.0033
SER 1970.0034
SER 1980.0038
LEU 1990.0038
LYS 2000.0041
LYS 2010.0039
LEU 2020.0038
GLU 2030.0037
LEU 2040.0038
SER 2050.0038
SER 2060.0037
ASN 2070.0036
GLN 2080.0035
ILE 2090.0035
LYS 2100.0035
GLU 2110.0037
PHE 2120.0038
SER 2130.0041
PRO 2140.0043
GLY 2150.0044
CYS 2160.0041
PHE 2170.0042
HIS 2180.0045
ALA 2190.0044
ILE 2200.0043
GLY 2210.0048
ARG 2220.0047
LEU 2230.0043
PHE 2240.0043
GLY 2250.0039
LEU 2260.0035
PHE 2270.0031
LEU 2280.0029
ASN 2290.0027
ASN 2300.0026
VAL 2310.0027
GLN 2320.0024
LEU 2330.0027
GLY 2340.0027
PRO 2350.0029
SER 2360.0037
LEU 2370.0033
THR 2380.0029
GLU 2390.0034
LYS 2400.0038
LEU 2410.0035
CYS 2420.0035
LEU 2430.0041
GLU 2440.0042
LEU 2450.0039
ALA 2460.0045
ASN 2470.0049
THR 2480.0046
SER 2490.0044
ILE 2500.0038
ARG 2510.0029
ASN 2520.0025
LEU 2530.0022
SER 2540.0019
LEU 2550.0018
SER 2560.0017
ASN 2570.0015
SER 2580.0017
GLN 2590.0019
LEU 2600.0018
SER 2610.0023
THR 2620.0024
THR 2630.0019
SER 2640.0022
ASN 2650.0020
THR 2660.0033
THR 2670.0028
PHE 2680.0023
LEU 2690.0028
GLY 2700.0032
LEU 2710.0029
LYS 2720.0031
TRP 2730.0035
THR 2740.0031
ASN 2750.0028
LEU 2760.0015
THR 2770.0013
MET 2780.0013
LEU 2790.0012
ASP 2800.0014
LEU 2810.0015
SER 2820.0015
TYR 2830.0014
ASN 2840.0014
ASN 2850.0016
LEU 2860.0022
ASN 2870.0026
VAL 2880.0026
VAL 2890.0024
GLY 2900.0025
ASN 2910.0022
ASP 2920.0018
SER 2930.0017
PHE 2940.0015
ALA 2950.0015
TRP 2960.0018
LEU 2970.0014
PRO 2980.0012
GLN 2990.0012
LEU 3000.0010
GLU 3010.0010
TYR 3020.0012
PHE 3030.0014
PHE 3040.0016
LEU 3050.0018
GLU 3060.0020
TYR 3070.0017
ASN 3080.0019
ASN 3090.0021
ILE 3100.0025
GLN 3110.0029
HIS 3120.0029
LEU 3130.0029
PHE 3140.0029
SER 3150.0029
HIS 3160.0023
SER 3170.0023
LEU 3180.0021
HIS 3190.0020
GLY 3200.0018
LEU 3210.0016
PHE 3220.0015
ASN 3230.0015
VAL 3240.0016
ARG 3250.0016
TYR 3260.0018
LEU 3270.0018
ASN 3280.0018
LEU 3290.0018
LYS 3300.0019
ARG 3310.0016
SER 3320.0020
PHE 3330.0021
THR 3340.0020
LYS 3350.0016
GLN 3360.0027
SER 3370.0046
ILE 3380.0065
SER 3390.0085
LEU 3400.0078
ALA 3410.0042
SER 3420.0037
LEU 3430.0024
PRO 3440.0026
LYS 3450.0037
ILE 3460.0027
ASP 3470.0025
ASP 3480.0025
PHE 3490.0026
SER 3500.0028
PHE 3510.0023
GLN 3520.0022
TRP 3530.0021
LEU 3540.0022
LYS 3550.0021
CYS 3560.0017
LEU 3570.0018
GLU 3580.0021
HIS 3590.0023
LEU 3600.0021
ASN 3610.0020
MET 3620.0019
GLU 3630.0019
ASP 3640.0017
ASN 3650.0016
ASP 3660.0018
ILE 3670.0019
PRO 3680.0018
GLY 3690.0020
ILE 3700.0022
LYS 3710.0021
SER 3720.0023
ASN 3730.0025
MET 3740.0025
PHE 3750.0028
THR 3760.0022
GLY 3770.0021
LEU 3780.0024
ILE 3790.0023
ASN 3800.0025
LEU 3810.0026
LYS 3820.0030
TYR 3830.0029
LEU 3840.0025
SER 3850.0024
LEU 3860.0021
SER 3870.0019
ASN 3880.0018
SER 3890.0018
PHE 3900.0017
THR 3910.0015
SER 3920.0016
LEU 3930.0020
ARG 3940.0021
THR 3950.0027
LEU 3960.0028
THR 3970.0034
ASN 3980.0040
GLU 3990.0040
THR 4000.0034
PHE 4010.0033
VAL 4020.0036
SER 4030.0036
LEU 4040.0038
ALA 4050.0042
HIS 4060.0036
SER 4070.0036
PRO 4080.0039
LEU 4090.0036
HIS 4100.0037
ILE 4110.0034
LEU 4120.0030
ASN 4130.0026
LEU 4140.0021
THR 4150.0019
LYS 4160.0013
ASN 4170.0015
LYS 4180.0014
ILE 4190.0018
SER 4200.0020
LYS 4210.0026
ILE 4220.0028
GLU 4230.0036
SER 4240.0040
ASP 4250.0043
ALA 4260.0036
PHE 4270.0036
SER 4280.0043
TRP 4290.0045
LEU 4300.0043
GLY 4310.0046
HIS 4320.0047
LEU 4330.0040
GLU 4340.0037
VAL 4350.0032
LEU 4360.0027
ASP 4370.0022
LEU 4380.0017
GLY 4390.0013
LEU 4400.0013
ASN 4410.0010
GLU 4420.0014
ILE 4430.0017
GLY 4440.0023
GLN 4450.0027
GLU 4460.0029
LEU 4470.0025
THR 4480.0033
GLY 4490.0029
GLN 4500.0036
GLU 4510.0032
TRP 4520.0030
ARG 4530.0039
GLY 4540.0044
LEU 4550.0037
GLU 4560.0039
ASN 4570.0038
ILE 4580.0029
PHE 4590.0026
GLU 4600.0022
ILE 4610.0017
TYR 4620.0015
LEU 4630.0011
SER 4640.0014
TYR 4650.0016
ASN 4660.0012
LYS 4670.0020
TYR 4680.0022
LEU 4690.0018
GLN 4700.0023
LEU 4710.0020
THR 4720.0023
ARG 4730.0022
ASN 4740.0022
SER 4750.0018
PHE 4760.0015
ALA 4770.0020
LEU 4780.0023
VAL 4790.0017
PRO 4800.0012
SER 4810.0012
LEU 4820.0013
GLN 4830.0021
ARG 4840.0020
LEU 4850.0017
MET 4860.0016
LEU 4870.0016
ARG 4880.0021
ARG 4890.0023
VAL 4900.0018
ALA 4910.0024
LEU 4920.0018
LYS 4930.0024
ASN 4940.0024
VAL 4950.0017
ASP 4960.0016
SER 4970.0017
SER 4980.0020
PRO 4990.0017
SER 5000.0013
PRO 5010.0013
PHE 5020.0010
GLN 5030.0009
PRO 5040.0007
LEU 5050.0004
ARG 5060.0005
ASN 5070.0008
LEU 5080.0013
THR 5090.0021
ILE 5100.0025
LEU 5110.0018
ASP 5120.0021
LEU 5130.0021
SER 5140.0024
ASN 5150.0025
ASN 5160.0023
ASN 5170.0021
ILE 5180.0018
ALA 5190.0016
ASN 5200.0014
ILE 5210.0012
ASN 5220.0011
ASP 5230.0011
ASP 5240.0011
MET 5250.0011
LEU 5260.0010
GLU 5270.0008
GLY 5280.0006
LEU 5290.0007
GLU 5300.0007
LYS 5310.0011
LEU 5320.0012
GLU 5330.0014
ILE 5340.0016
LEU 5350.0016
ASP 5360.0016
LEU 5370.0016
GLN 5380.0018
HIS 5390.0020
ASN 5400.0019
ASN 5410.0017
LEU 5420.0012
ALA 5430.0012
ARG 5440.0016
LEU 5450.0013
TRP 5460.0011
LYS 5470.0016
HIS 5480.0020
ALA 5490.0025
ASN 5500.0023
PRO 5510.0029
GLY 5520.0026
GLY 5530.0021
PRO 5540.0013
ILE 5550.0008
TYR 5560.0006
PHE 5570.0006
LEU 5580.0005
LYS 5590.0004
GLY 5600.0006
LEU 5610.0004
SER 5620.0007
HIS 5630.0010
LEU 5640.0008
HIS 5650.0011
ILE 5660.0011
LEU 5670.0008
ASN 5680.0010
LEU 5690.0009
GLU 5700.0011
SER 5710.0013
ASN 5720.0012
GLY 5730.0013
PHE 5740.0010
ASP 5750.0012
GLU 5760.0011
ILE 5770.0009
PRO 5780.0011
VAL 5790.0012
GLU 5800.0011
VAL 5810.0007
PHE 5820.0007
LYS 5830.0010
ASP 5840.0010
LEU 5850.0008
PHE 5860.0014
GLU 5870.0014
LEU 5880.0009
LYS 5890.0010
ILE 5900.0006
ILE 5910.0003
ASP 5920.0003
LEU 5930.0004
GLY 5940.0005
LEU 5950.0008
ASN 5960.0007
ASN 5970.0009
LEU 5980.0010
ASN 5990.0012
THR 6000.0014
LEU 6010.0009
PRO 6020.0010
ALA 6030.0010
SER 6040.0010
VAL 6050.0009
PHE 6060.0011
ASN 6070.0014
ASN 6080.0013
GLN 6090.0011
VAL 6100.0014
SER 6110.0012
LEU 6120.0008
LYS 6130.0005
SER 6140.0004
LEU 6150.0005
ASN 6160.0006
LEU 6170.0008
GLN 6180.0011
LYS 6190.0013
ASN 6200.0012
LEU 6210.0014
ILE 6220.0012
THR 6230.0015
SER 6240.0014
VAL 6250.0012
GLU 6260.0005
LYS 6270.0007
LYS 6280.0004
VAL 6290.0005
PHE 6300.0008
GLY 6310.0010
PRO 6320.0006
ALA 6330.0007
PHE 6340.0009
ARG 6350.0008
ASN 6360.0008
LEU 6370.0008
THR 6380.0009
GLU 6390.0011
LEU 6400.0011
ASP 6410.0014
MET 6420.0013
ARG 6430.0018
PHE 6440.0020
ASN 6450.0017
PRO 6460.0021
PHE 6470.0018
ASP 6480.0021
CYS 6490.0020
THR 6500.0025
CYS 6510.0023
GLU 6520.0026
SER 6530.0019
ILE 6540.0016
ALA 6550.0021
TRP 6560.0019
PHE 6570.0017
VAL 6580.0021
ASN 6590.0024
TRP 6600.0023
ILE 6610.0026
ASN 6620.0027
GLU 6630.0023
THR 6640.0022
HIS 6650.0022
THR 6660.0022
ASN 6670.0023
ILE 6680.0020
PRO 6690.0024
GLU 6700.0025
LEU 6710.0027
SER 6720.0030
SER 6730.0033
HIS 6740.0028
TYR 6750.0023
LEU 6760.0028
CYS 6770.0027
ASN 6780.0033
THR 6790.0035
PRO 6800.0038
PRO 6810.0049
HIS 6820.0043
TYR 6830.0034
HIS 6840.0042
GLY 6850.0042
PHE 6860.0033
PRO 6870.0028
VAL 6880.0021
ARG 6890.0023
LEU 6900.0023
PHE 6910.0017
ASP 6920.0018
THR 6930.0029
SER 6940.0036
SER 6950.0036
CYS 6960.0045
GLU 10.0167
ALA 20.0146
ALA 30.0136
ALA 40.0100
LYS 50.0075
MET 60.0062
GLN 70.0050
ARG 80.0033
LEU 90.0031
VAL 100.0038
LEU 110.0017
LEU 120.0013
LEU 130.0019
ALA 140.0020
ILE 150.0016
SER 160.0015
LEU 170.0022
LEU 180.0024
LEU 190.0028
TYR 200.0042
GLN 210.0059
ASP 220.0069
LEU 230.0080
PRO 240.0091
VAL 250.0087
ARG 260.0080
SER 270.0076
GLU 280.0060
PHE 290.0065
GLU 300.0066
LEU 310.0049
ASP 320.0042
ARG 330.0037
ILE 340.0029
CYS 350.0021
GLY 360.0028
TYR 370.0041
GLY 380.0009
THR 390.0035
ALA 400.0027
ARG 410.0035
CYS 420.0034
ARG 430.0038
LYS 440.0040
LYS 450.0038
CYS 460.0041
ARG 470.0055
SER 480.0057
GLN 490.0064
GLU 500.0050
TYR 510.0035
ARG 520.0025
ILE 530.0022
GLY 540.0015
ARG 550.0020
CYS 560.0025
PRO 570.0027
ASN 580.0031
THR 590.0028
TYR 600.0028
ALA 610.0029
CYS 620.0023
CYS 630.0036
LEU 640.0042
ARG 650.0061
LYS 660.0097
TRP 670.0110
ASP 680.0087
GLU 690.0073
SER 700.0068
LEU 710.0078
LEU 720.0080
ASN 730.0045
ARG 740.0033
THR 750.0057
LYS 760.0058
PRO 770.0049
GLU 780.0063
ALA 790.0058
ALA 800.0080
ALA 810.0141
LYS 820.0127
LYS 830.0117
GLU 840.0166
MET 850.0144
ASN 860.0156
LEU 870.0123
SER 880.0102
VAL 890.0076
GLY 900.0067
LEU 910.0087
GLY 920.0187
GLY 930.0282
GLY 940.0271
SER 950.0170
ASN 960.0086
LEU 970.0072
SER 980.0114
VAL 990.0139
GLY 1000.0187
LEU 1010.0165
GLY 1020.0175
GLU 1030.0163
ILE 1040.0186
GLY 1050.0189
GLY 1060.0200
GLY 1070.0150
SER 1080.0117
LYS 1090.0102
LEU 1100.0119
LEU 1110.0132
ASP 1120.0102
ILE 1130.0066
ASN 1140.0046
LEU 1150.0022
GLY 1160.0039
ARG 1170.0075
GLY 1180.0084
GLY 1190.0088
GLY 1200.0071
SER 1210.0028
MET 1220.0033
VAL 1230.0032
ASP 1240.0041
LEU 1250.0038
THR 1260.0027
PHE 1270.0032
GLY 1280.0041
GLY 1290.0058
VAL 1300.0068
GLY 1310.0095
GLY 1320.0091
GLY 1330.0073
SER 1340.0072
THR 1350.0054
PHE 1360.0063
THR 1370.0064
PHE 1380.0059
PHE 1390.0060
PRO 1400.0058
LEU 1410.0087
VAL 1420.0179
ILE 1430.0187
GLY 1440.0278
GLY 1450.0319
GLY 1460.0151
SER 1470.0094
ASP 1480.0029
ALA 1490.0036
MET 1500.0021
TYR 1510.0033
LEU 1520.0021
GLY 1530.0037
PHE 1540.0044
ALA 1550.0064
ALA 1560.0093
GLY 1570.0076
GLY 1580.0066
GLY 1590.0041
SER 1600.0036
ALA 1610.0040
GLY 1620.0042
GLY 1630.0042
GLU 1640.0043
ASN 1650.0041
HIS 1660.0038
VAL 1670.0032
ALA 1680.0030
PHE 1690.0032
GLY 1700.0037
PRO 1710.0108
GLY 1720.0127
PRO 1730.0124
GLY 1740.0077
VAL 1750.0036
ASP 1760.0035
LEU 1770.0040
THR 1780.0047
PHE 1790.0063
GLY 1800.0077
GLY 1810.0088
VAL 1820.0091
GLN 1830.0071
PHE 1840.0067
ALA 1850.0055
MET 1860.0074
VAL 1870.0077
ASN 1880.0040
ASN 1890.0040
GLY 1900.0063
PRO 1910.0080
GLY 1920.0041
PRO 1930.0051
GLY 1940.0072
GLU 1950.0039
SER 1960.0029
PHE 1970.0020
THR 1980.0011
ALA 1990.0020
GLN 2000.0025
PRO 2010.0014
ALA 2020.0026
ASP 2030.0010
MET 2040.0046
GLN 2050.0060
ALA 2060.0042
GLY 2070.0036
ILE 2080.0035
LYS 2090.0030
GLY 2100.0029
PRO 2110.0019
GLY 2120.0026
PRO 2130.0033
GLY 2140.0030
GLY 2150.0028
SER 2160.0101
ILE 2170.0123
GLN 2180.0136
VAL 2190.0157
ILE 2200.0179
ASN 2210.0225
GLY 2220.0160
SER 2230.0174
THR 2240.0213
ILE 2250.0186
GLY 2260.0126
THR 2270.0252
GLY 2280.0377
SER 2290.0484
LYS 2300.0270
LYS 2310.0129
THR 2320.0148
ILE 2330.0234
LEU 2340.0293
ILE 2350.0394
TYR 2360.0264
SER 2370.0256
ILE 2380.0149
ILE 2390.0166
GLY 2400.0077
VAL 2410.0205
LYS 2420.0318
LYS 2430.0459
GLY 2440.0526
THR 2450.0446
LEU 2460.0129
ALA 2470.0186
TRP 2480.0218
ALA 2490.0333
ARG 2500.0417
THR 2510.0360
GLY 2520.0333
PHE 2530.0219
SER 2540.0198
PRO 2550.0233
ALA 2560.0322
LYS 2570.0205
LYS 2580.0105
LEU 2590.0140
ASN 2600.0318
ALA 2610.0242
GLY 2620.0216
VAL 2630.0240
VAL 2640.0268
ARG 2650.0278
VAL 2660.0231
PHE 2670.0194
PHE 2680.0215
LEU 2690.0267
ASN 2700.0467
GLN 2710.0601
LYS 2720.0591
LYS 2730.0358
ALA 2740.0248
LYS 2750.0392
ASP 2760.0276
VAL 2770.0301
LEU 2780.0383
ARG 2790.0464
LYS 2800.0488
THR 2810.0277
SER 2820.0069
ARG 2830.0218
PRO 2840.0520
MET 2850.0639
VAL 2860.0844
ASP 2870.0646
LEU 2880.0251
THR 2890.0212
PHE 2900.0586
GLY 2910.0400
GLY 2920.0867

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.