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***  TLR_3_simulation  ***

<R2> analysis for 2608260325273940753

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0623
THR 260.0074
LYS 270.0063
CYS 280.0044
THR 290.0038
VAL 300.0042
SER 310.0040
HIS 320.0047
GLU 330.0039
VAL 340.0028
ALA 350.0022
ASP 360.0015
CYS 370.0026
SER 380.0027
HIS 390.0045
LEU 400.0052
LYS 410.0045
LEU 420.0033
THR 430.0023
GLN 440.0019
VAL 450.0019
PRO 460.0031
ASP 470.0036
ASP 480.0047
LEU 490.0043
PRO 500.0050
THR 510.0044
ASN 520.0048
ILE 530.0037
THR 540.0034
VAL 550.0024
LEU 560.0013
ASN 570.0009
LEU 580.0014
THR 590.0019
HIS 600.0030
ASN 610.0032
GLN 620.0028
LEU 630.0014
ARG 640.0022
ARG 650.0023
LEU 660.0015
PRO 670.0020
ALA 680.0030
ALA 690.0028
ASN 700.0018
PHE 710.0020
THR 720.0031
ARG 730.0035
TYR 740.0035
SER 750.0043
GLN 760.0039
LEU 770.0030
THR 780.0033
SER 790.0023
LEU 800.0013
ASP 810.0010
VAL 820.0009
GLY 830.0018
PHE 840.0027
ASN 850.0024
THR 860.0037
ILE 870.0031
SER 880.0044
LYS 890.0042
LEU 900.0032
GLU 910.0040
PRO 920.0045
GLU 930.0050
LEU 940.0036
CYS 950.0038
GLN 960.0051
LYS 970.0047
LEU 980.0041
PRO 990.0052
MET 1000.0050
LEU 1010.0034
LYS 1020.0031
VAL 1030.0023
LEU 1040.0009
ASN 1050.0014
LEU 1060.0019
GLN 1070.0032
HIS 1080.0043
ASN 1090.0040
GLU 1100.0048
LEU 1110.0038
SER 1120.0050
GLN 1130.0049
LEU 1140.0037
SER 1150.0041
ASP 1160.0039
LYS 1170.0045
THR 1180.0033
PHE 1190.0022
ALA 1200.0035
PHE 1210.0041
CYS 1220.0030
THR 1230.0036
ASN 1240.0039
LEU 1250.0026
THR 1260.0028
GLU 1270.0025
LEU 1280.0016
HIS 1290.0025
LEU 1300.0028
MET 1310.0041
SER 1320.0049
ASN 1330.0045
SER 1340.0051
ILE 1350.0043
GLN 1360.0039
LYS 1370.0035
ILE 1380.0026
LYS 1390.0026
ASN 1400.0023
ASN 1410.0012
PRO 1420.0010
PHE 1430.0003
VAL 1440.0008
LYS 1450.0018
GLN 1460.0012
LYS 1470.0021
ASN 1480.0027
LEU 1490.0022
ILE 1500.0032
THR 1510.0030
LEU 1520.0027
ASP 1530.0032
LEU 1540.0033
SER 1550.0041
HIS 1560.0047
ASN 1570.0043
GLY 1580.0042
LEU 1590.0037
SER 1600.0038
SER 1610.0033
THR 1620.0033
LYS 1630.0029
LEU 1640.0028
GLY 1650.0025
THR 1660.0025
GLN 1670.0025
VAL 1680.0031
GLN 1690.0026
LEU 1700.0026
GLU 1710.0030
ASN 1720.0030
LEU 1730.0029
GLN 1740.0033
GLU 1750.0032
LEU 1760.0030
LEU 1770.0032
LEU 1780.0032
SER 1790.0035
ASN 1800.0037
ASN 1810.0035
LYS 1820.0031
ILE 1830.0031
GLN 1840.0035
ALA 1850.0040
LEU 1860.0037
LYS 1870.0043
SER 1880.0044
GLU 1890.0049
GLU 1900.0043
LEU 1910.0039
ASP 1920.0042
ILE 1930.0039
PHE 1940.0037
ALA 1950.0041
ASN 1960.0039
SER 1970.0035
SER 1980.0030
LEU 1990.0027
LYS 2000.0023
LYS 2010.0022
LEU 2020.0022
GLU 2030.0022
LEU 2040.0023
SER 2050.0023
SER 2060.0023
ASN 2070.0027
GLN 2080.0031
ILE 2090.0032
LYS 2100.0040
GLU 2110.0045
PHE 2120.0038
SER 2130.0045
PRO 2140.0044
GLY 2150.0039
CYS 2160.0039
PHE 2170.0031
HIS 2180.0034
ALA 2190.0040
ILE 2200.0035
GLY 2210.0037
ARG 2220.0027
LEU 2230.0019
PHE 2240.0010
GLY 2250.0006
LEU 2260.0007
PHE 2270.0010
LEU 2280.0014
ASN 2290.0017
ASN 2300.0021
VAL 2310.0019
GLN 2320.0027
LEU 2330.0026
GLY 2340.0032
PRO 2350.0033
SER 2360.0040
LEU 2370.0033
THR 2380.0027
GLU 2390.0027
LYS 2400.0025
LEU 2410.0027
CYS 2420.0021
LEU 2430.0022
GLU 2440.0021
LEU 2450.0012
ALA 2460.0013
ASN 2470.0009
THR 2480.0010
SER 2490.0006
ILE 2500.0004
ARG 2510.0016
ASN 2520.0020
LEU 2530.0020
SER 2540.0024
LEU 2550.0027
SER 2560.0031
ASN 2570.0032
SER 2580.0030
GLN 2590.0034
LEU 2600.0036
SER 2610.0035
THR 2620.0033
THR 2630.0031
SER 2640.0029
ASN 2650.0027
THR 2660.0028
THR 2670.0029
PHE 2680.0026
LEU 2690.0022
GLY 2700.0020
LEU 2710.0020
LYS 2720.0018
TRP 2730.0013
THR 2740.0015
ASN 2750.0017
LEU 2760.0030
THR 2770.0032
MET 2780.0035
LEU 2790.0034
ASP 2800.0038
LEU 2810.0045
SER 2820.0042
TYR 2830.0042
ASN 2840.0044
ASN 2850.0041
LEU 2860.0038
ASN 2870.0034
VAL 2880.0031
VAL 2890.0031
GLY 2900.0030
ASN 2910.0020
ASP 2920.0022
SER 2930.0026
PHE 2940.0029
ALA 2950.0027
TRP 2960.0024
LEU 2970.0028
PRO 2980.0027
GLN 2990.0030
LEU 3000.0032
GLU 3010.0039
TYR 3020.0041
PHE 3030.0035
PHE 3040.0038
LEU 3050.0034
GLU 3060.0036
TYR 3070.0034
ASN 3080.0037
ASN 3090.0035
ILE 3100.0034
GLN 3110.0028
HIS 3120.0020
LEU 3130.0017
PHE 3140.0015
SER 3150.0021
HIS 3160.0018
SER 3170.0019
LEU 3180.0023
HIS 3190.0023
GLY 3200.0028
LEU 3210.0027
PHE 3220.0033
ASN 3230.0039
VAL 3240.0035
ARG 3250.0039
TYR 3260.0034
LEU 3270.0026
ASN 3280.0025
LEU 3290.0019
LYS 3300.0023
ARG 3310.0029
SER 3320.0027
PHE 3330.0026
THR 3340.0035
LYS 3350.0050
GLN 3360.0092
SER 3370.0109
ILE 3380.0166
SER 3390.0181
LEU 3400.0139
ALA 3410.0104
SER 3420.0080
LEU 3430.0062
PRO 3440.0036
LYS 3450.0044
ILE 3460.0014
ASP 3470.0020
ASP 3480.0028
PHE 3490.0030
SER 3500.0022
PHE 3510.0023
GLN 3520.0030
TRP 3530.0030
LEU 3540.0032
LYS 3550.0040
CYS 3560.0041
LEU 3570.0035
GLU 3580.0037
HIS 3590.0032
LEU 3600.0024
ASN 3610.0018
MET 3620.0009
GLU 3630.0009
ASP 3640.0014
ASN 3650.0016
ASP 3660.0015
ILE 3670.0008
PRO 3680.0018
GLY 3690.0021
ILE 3700.0027
LYS 3710.0025
SER 3720.0032
ASN 3730.0032
MET 3740.0026
PHE 3750.0029
THR 3760.0033
GLY 3770.0037
LEU 3780.0036
ILE 3790.0042
ASN 3800.0042
LEU 3810.0033
LYS 3820.0033
TYR 3830.0030
LEU 3840.0027
SER 3850.0024
LEU 3860.0018
SER 3870.0018
ASN 3880.0014
SER 3890.0012
PHE 3900.0015
THR 3910.0018
SER 3920.0032
LEU 3930.0035
ARG 3940.0051
THR 3950.0057
LEU 3960.0045
THR 3970.0043
ASN 3980.0037
GLU 3990.0039
THR 4000.0041
PHE 4010.0033
VAL 4020.0031
SER 4030.0031
LEU 4040.0030
ALA 4050.0027
HIS 4060.0030
SER 4070.0030
PRO 4080.0027
LEU 4090.0028
HIS 4100.0027
ILE 4110.0028
LEU 4120.0030
ASN 4130.0034
LEU 4140.0036
THR 4150.0039
LYS 4160.0046
ASN 4170.0042
LYS 4180.0052
ILE 4190.0049
SER 4200.0058
LYS 4210.0056
ILE 4220.0045
GLU 4230.0043
SER 4240.0035
ASP 4250.0029
ALA 4260.0029
PHE 4270.0024
SER 4280.0020
TRP 4290.0020
LEU 4300.0018
GLY 4310.0004
HIS 4320.0006
LEU 4330.0013
GLU 4340.0022
VAL 4350.0029
LEU 4360.0028
ASP 4370.0036
LEU 4380.0038
GLY 4390.0046
LEU 4400.0055
ASN 4410.0056
GLU 4420.0061
ILE 4430.0053
GLY 4440.0058
GLN 4450.0052
GLU 4460.0042
LEU 4470.0033
THR 4480.0032
GLY 4490.0026
GLN 4500.0031
GLU 4510.0029
TRP 4520.0020
ARG 4530.0023
GLY 4540.0023
LEU 4550.0017
GLU 4560.0038
ASN 4570.0037
ILE 4580.0028
PHE 4590.0040
GLU 4600.0037
ILE 4610.0029
TYR 4620.0037
LEU 4630.0035
SER 4640.0046
TYR 4650.0055
ASN 4660.0054
LYS 4670.0059
TYR 4680.0052
LEU 4690.0040
GLN 4700.0036
LEU 4710.0031
THR 4720.0028
ARG 4730.0027
ASN 4740.0028
SER 4750.0026
PHE 4760.0026
ALA 4770.0029
LEU 4780.0031
VAL 4790.0030
PRO 4800.0038
SER 4810.0041
LEU 4820.0035
GLN 4830.0041
ARG 4840.0039
LEU 4850.0034
MET 4860.0038
LEU 4870.0035
ARG 4880.0044
ARG 4890.0047
VAL 4900.0039
ALA 4910.0045
LEU 4920.0038
LYS 4930.0034
ASN 4940.0031
VAL 4950.0030
ASP 4960.0032
SER 4970.0030
SER 4980.0030
PRO 4990.0032
SER 5000.0033
PRO 5010.0032
PHE 5020.0033
GLN 5030.0034
PRO 5040.0036
LEU 5050.0036
ARG 5060.0035
ASN 5070.0036
LEU 5080.0035
THR 5090.0036
ILE 5100.0036
LEU 5110.0038
ASP 5120.0037
LEU 5130.0034
SER 5140.0036
ASN 5150.0034
ASN 5160.0034
ASN 5170.0028
ILE 5180.0030
ALA 5190.0027
ASN 5200.0029
ILE 5210.0035
ASN 5220.0035
ASP 5230.0035
ASP 5240.0035
MET 5250.0035
LEU 5260.0034
GLU 5270.0034
GLY 5280.0031
LEU 5290.0029
GLU 5300.0026
LYS 5310.0025
LEU 5320.0026
GLU 5330.0026
ILE 5340.0027
LEU 5350.0032
ASP 5360.0032
LEU 5370.0029
GLN 5380.0025
HIS 5390.0023
ASN 5400.0024
ASN 5410.0024
LEU 5420.0024
ALA 5430.0020
ARG 5440.0023
LEU 5450.0026
TRP 5460.0018
LYS 5470.0020
HIS 5480.0029
ALA 5490.0033
ASN 5500.0036
PRO 5510.0056
GLY 5520.0061
GLY 5530.0047
PRO 5540.0031
ILE 5550.0032
TYR 5560.0024
PHE 5570.0026
LEU 5580.0020
LYS 5590.0021
GLY 5600.0023
LEU 5610.0020
SER 5620.0016
HIS 5630.0016
LEU 5640.0018
HIS 5650.0018
ILE 5660.0017
LEU 5670.0014
ASN 5680.0015
LEU 5690.0012
GLU 5700.0010
SER 5710.0014
ASN 5720.0011
GLY 5730.0009
PHE 5740.0010
ASP 5750.0016
GLU 5760.0011
ILE 5770.0010
PRO 5780.0014
VAL 5790.0016
GLU 5800.0015
VAL 5810.0006
PHE 5820.0004
LYS 5830.0009
ASP 5840.0008
LEU 5850.0006
PHE 5860.0005
GLU 5870.0007
LEU 5880.0011
LYS 5890.0016
ILE 5900.0020
ILE 5910.0014
ASP 5920.0015
LEU 5930.0016
GLY 5940.0019
LEU 5950.0020
ASN 5960.0027
ASN 5970.0032
LEU 5980.0033
ASN 5990.0040
THR 6000.0042
LEU 6010.0030
PRO 6020.0031
ALA 6030.0031
SER 6040.0030
VAL 6050.0029
PHE 6060.0024
ASN 6070.0024
ASN 6080.0018
GLN 6090.0020
VAL 6100.0021
SER 6110.0024
LEU 6120.0027
LYS 6130.0030
SER 6140.0031
LEU 6150.0031
ASN 6160.0032
LEU 6170.0035
GLN 6180.0035
LYS 6190.0038
ASN 6200.0040
LEU 6210.0054
ILE 6220.0049
THR 6230.0046
SER 6240.0046
VAL 6250.0043
GLU 6260.0040
LYS 6270.0039
LYS 6280.0044
VAL 6290.0043
PHE 6300.0039
GLY 6310.0037
PRO 6320.0035
ALA 6330.0035
PHE 6340.0038
ARG 6350.0038
ASN 6360.0036
LEU 6370.0036
THR 6380.0037
GLU 6390.0036
LEU 6400.0035
ASP 6410.0035
MET 6420.0037
ARG 6430.0036
PHE 6440.0040
ASN 6450.0041
PRO 6460.0052
PHE 6470.0036
ASP 6480.0032
CYS 6490.0015
THR 6500.0025
CYS 6510.0048
GLU 6520.0064
SER 6530.0053
ILE 6540.0036
ALA 6550.0046
TRP 6560.0035
PHE 6570.0028
VAL 6580.0020
ASN 6590.0028
TRP 6600.0029
ILE 6610.0022
ASN 6620.0025
GLU 6630.0037
THR 6640.0035
HIS 6650.0033
THR 6660.0033
ASN 6670.0029
ILE 6680.0026
PRO 6690.0028
GLU 6700.0026
LEU 6710.0015
SER 6720.0018
SER 6730.0031
HIS 6740.0033
TYR 6750.0023
LEU 6760.0039
CYS 6770.0032
ASN 6780.0051
THR 6790.0045
PRO 6800.0030
PRO 6810.0059
HIS 6820.0057
TYR 6830.0044
HIS 6840.0063
GLY 6850.0072
PHE 6860.0052
PRO 6870.0037
VAL 6880.0013
ARG 6890.0016
LEU 6900.0038
PHE 6910.0044
ASP 6920.0077
THR 6930.0084
SER 6940.0130
SER 6950.0127
CYS 6960.0121
GLU 10.0239
ALA 20.0185
ALA 30.0044
ALA 40.0073
LYS 50.0119
MET 60.0109
GLN 70.0079
ARG 80.0060
LEU 90.0122
VAL 100.0147
LEU 110.0089
LEU 120.0084
LEU 130.0125
ALA 140.0123
ILE 150.0086
SER 160.0102
LEU 170.0112
LEU 180.0089
LEU 190.0046
TYR 200.0053
GLN 210.0128
ASP 220.0158
LEU 230.0165
PRO 240.0232
VAL 250.0158
ARG 260.0076
SER 270.0093
GLU 280.0048
PHE 290.0131
GLU 300.0090
LEU 310.0023
ASP 320.0051
ARG 330.0059
ILE 340.0032
CYS 350.0059
GLY 360.0068
TYR 370.0079
GLY 380.0054
THR 390.0038
ALA 400.0033
ARG 410.0041
CYS 420.0041
ARG 430.0030
LYS 440.0034
LYS 450.0027
CYS 460.0020
ARG 470.0025
SER 480.0032
GLN 490.0014
GLU 500.0011
TYR 510.0024
ARG 520.0018
ILE 530.0032
GLY 540.0029
ARG 550.0026
CYS 560.0045
PRO 570.0063
ASN 580.0057
THR 590.0036
TYR 600.0029
ALA 610.0015
CYS 620.0022
CYS 630.0019
LEU 640.0029
ARG 650.0028
LYS 660.0043
TRP 670.0050
ASP 680.0060
GLU 690.0069
SER 700.0081
LEU 710.0061
LEU 720.0061
ASN 730.0074
ARG 740.0060
THR 750.0049
LYS 760.0056
PRO 770.0037
GLU 780.0022
ALA 790.0067
ALA 800.0089
ALA 810.0069
LYS 820.0072
LYS 830.0052
GLU 840.0066
MET 850.0074
ASN 860.0054
LEU 870.0073
SER 880.0051
VAL 890.0065
GLY 900.0063
LEU 910.0043
GLY 920.0103
GLY 930.0164
GLY 940.0199
SER 950.0133
ASN 960.0045
LEU 970.0048
SER 980.0049
VAL 990.0088
GLY 1000.0093
LEU 1010.0113
GLY 1020.0099
GLU 1030.0091
ILE 1040.0143
GLY 1050.0190
GLY 1060.0055
GLY 1070.0013
SER 1080.0065
LYS 1090.0089
LEU 1100.0142
LEU 1110.0083
ASP 1120.0130
ILE 1130.0105
ASN 1140.0160
LEU 1150.0140
GLY 1160.0155
ARG 1170.0133
GLY 1180.0109
GLY 1190.0204
GLY 1200.0227
SER 1210.0085
MET 1220.0077
VAL 1230.0092
ASP 1240.0098
LEU 1250.0103
THR 1260.0106
PHE 1270.0102
GLY 1280.0111
GLY 1290.0104
VAL 1300.0103
GLY 1310.0075
GLY 1320.0043
GLY 1330.0020
SER 1340.0040
THR 1350.0033
PHE 1360.0055
THR 1370.0095
PHE 1380.0085
PHE 1390.0130
PRO 1400.0122
LEU 1410.0107
VAL 1420.0103
ILE 1430.0124
GLY 1440.0141
GLY 1450.0185
GLY 1460.0109
SER 1470.0111
ASP 1480.0129
ALA 1490.0115
MET 1500.0109
TYR 1510.0074
LEU 1520.0077
GLY 1530.0098
PHE 1540.0101
ALA 1550.0124
ALA 1560.0069
GLY 1570.0059
GLY 1580.0048
GLY 1590.0034
SER 1600.0024
ALA 1610.0038
GLY 1620.0054
GLY 1630.0079
GLU 1640.0085
ASN 1650.0056
HIS 1660.0074
VAL 1670.0040
ALA 1680.0043
PHE 1690.0028
GLY 1700.0022
PRO 1710.0422
GLY 1720.0517
PRO 1730.0546
GLY 1740.0317
VAL 1750.0081
ASP 1760.0043
LEU 1770.0038
THR 1780.0093
PHE 1790.0113
GLY 1800.0170
GLY 1810.0277
VAL 1820.0225
GLN 1830.0144
PHE 1840.0076
ALA 1850.0016
MET 1860.0118
VAL 1870.0196
ASN 1880.0072
ASN 1890.0228
GLY 1900.0215
PRO 1910.0313
GLY 1920.0299
PRO 1930.0227
GLY 1940.0212
GLU 1950.0264
SER 1960.0486
PHE 1970.0384
THR 1980.0239
ALA 1990.0104
GLN 2000.0135
PRO 2010.0132
ALA 2020.0179
ASP 2030.0202
MET 2040.0111
GLN 2050.0238
ALA 2060.0201
GLY 2070.0138
ILE 2080.0251
LYS 2090.0178
GLY 2100.0243
PRO 2110.0146
GLY 2120.0178
PRO 2130.0123
GLY 2140.0463
GLY 2150.0448
SER 2160.0393
ILE 2170.0413
GLN 2180.0333
VAL 2190.0333
ILE 2200.0366
ASN 2210.0623
GLY 2220.0526
SER 2230.0332
THR 2240.0399
ILE 2250.0270
GLY 2260.0286
THR 2270.0232
GLY 2280.0162
SER 2290.0206
LYS 2300.0252
LYS 2310.0274
THR 2320.0276
ILE 2330.0263
LEU 2340.0237
ILE 2350.0304
TYR 2360.0240
SER 2370.0336
ILE 2380.0282
ILE 2390.0278
GLY 2400.0262
VAL 2410.0465
LYS 2420.0276
LYS 2430.0410
GLY 2440.0526
THR 2450.0376
LEU 2460.0201
ALA 2470.0147
TRP 2480.0231
ALA 2490.0365
ARG 2500.0468
THR 2510.0609
GLY 2520.0462
PHE 2530.0260
SER 2540.0156
PRO 2550.0157
ALA 2560.0293
LYS 2570.0267
LYS 2580.0252
LEU 2590.0278
ASN 2600.0278
ALA 2610.0348
GLY 2620.0343
VAL 2630.0231
VAL 2640.0303
ARG 2650.0278
VAL 2660.0264
PHE 2670.0267
PHE 2680.0263
LEU 2690.0269
ASN 2700.0279
GLN 2710.0160
LYS 2720.0294
LYS 2730.0334
ALA 2740.0209
LYS 2750.0138
ASP 2760.0201
VAL 2770.0164
LEU 2780.0168
ARG 2790.0201
LYS 2800.0181
THR 2810.0092
SER 2820.0056
ARG 2830.0064
PRO 2840.0107
MET 2850.0155
VAL 2860.0269
ASP 2870.0168
LEU 2880.0135
THR 2890.0128
PHE 2900.0182
GLY 2910.0208
GLY 2920.0304

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.