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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1133
GLU 270.0056
PRO 280.0056
CYS 290.0052
VAL 300.0052
GLU 310.0051
VAL 320.0048
VAL 330.0047
PRO 340.0051
ASN 350.0049
ILE 360.0045
THR 370.0044
TYR 380.0046
GLN 390.0046
CYS 400.0048
MET 410.0047
GLU 420.0050
LEU 430.0053
ASN 440.0054
PHE 450.0051
TYR 460.0051
LYS 470.0049
ILE 480.0046
PRO 490.0049
ASP 500.0050
ASN 510.0053
LEU 520.0050
PRO 530.0049
PHE 540.0047
SER 550.0045
THR 560.0044
LYS 570.0040
ASN 580.0039
LEU 590.0041
ASP 600.0042
LEU 610.0043
SER 620.0043
PHE 630.0046
ASN 640.0048
PRO 650.0049
LEU 660.0046
ARG 670.0045
HIS 680.0043
LEU 690.0040
GLY 700.0040
SER 710.0038
TYR 720.0038
SER 730.0040
PHE 740.0040
PHE 750.0041
SER 760.0044
PHE 770.0041
PRO 780.0039
GLU 790.0039
LEU 800.0037
GLN 810.0035
VAL 820.0035
LEU 830.0036
ASP 840.0037
LEU 850.0039
SER 860.0039
ARG 870.0042
CYS 880.0043
GLU 890.0045
ILE 900.0042
GLN 910.0042
THR 920.0040
ILE 930.0037
GLU 940.0036
ASP 950.0033
GLY 960.0033
ALA 970.0035
TYR 980.0034
GLN 990.0033
SER 1000.0035
LEU 1010.0034
SER 1020.0032
HIS 1030.0033
LEU 1040.0032
SER 1050.0029
THR 1060.0030
LEU 1070.0031
ILE 1080.0033
LEU 1090.0035
THR 1100.0035
GLY 1110.0039
ASN 1120.0040
PRO 1130.0041
ILE 1140.0039
GLN 1150.0040
SER 1160.0038
LEU 1170.0034
ALA 1180.0032
LEU 1190.0029
GLY 1200.0029
ALA 1210.0031
PHE 1220.0029
SER 1230.0028
GLY 1240.0029
LEU 1250.0029
SER 1260.0027
SER 1270.0028
LEU 1280.0027
GLN 1290.0026
LYS 1300.0027
LEU 1310.0028
VAL 1320.0030
ALA 1330.0031
VAL 1340.0033
GLU 1350.0036
THR 1360.0036
ASN 1370.0037
LEU 1380.0034
ALA 1390.0035
SER 1400.0032
LEU 1410.0029
GLU 1420.0029
ASN 1430.0031
PHE 1440.0029
PRO 1450.0027
ILE 1460.0026
GLY 1470.0024
HIS 1480.0024
LEU 1490.0025
LYS 1500.0024
THR 1510.0025
LEU 1520.0024
LYS 1530.0024
GLU 1540.0025
LEU 1550.0026
ASN 1560.0028
VAL 1570.0030
ALA 1580.0031
HIS 1590.0034
ASN 1600.0035
LEU 1610.0036
ILE 1620.0033
GLN 1630.0035
SER 1640.0033
PHE 1650.0031
LYS 1660.0030
LEU 1670.0028
PRO 1680.0027
GLU 1690.0026
TYR 1700.0025
PHE 1710.0025
SER 1720.0024
ASN 1730.0023
LEU 1740.0023
THR 1750.0023
ASN 1760.0023
LEU 1770.0023
GLU 1780.0023
HIS 1790.0024
LEU 1800.0025
ASP 1810.0027
LEU 1820.0029
SER 1830.0031
SER 1840.0034
ASN 1850.0034
LYS 1860.0036
ILE 1870.0034
GLN 1880.0037
SER 1890.0036
ILE 1900.0034
TYR 1910.0035
CYS 1920.0034
THR 1930.0033
ASP 1940.0031
LEU 1950.0030
ARG 1960.0029
VAL 1970.0027
LEU 1980.0027
HIS 1990.0028
GLN 2000.0027
MET 2010.0026
PRO 2020.0027
LEU 2030.0026
LEU 2040.0024
ASN 2050.0024
LEU 2060.0024
SER 2070.0025
LEU 2080.0026
ASP 2090.0027
LEU 2100.0029
SER 2110.0031
LEU 2120.0033
ASN 2130.0034
PRO 2140.0037
MET 2150.0036
ASN 2160.0039
PHE 2170.0038
ILE 2180.0036
GLN 2190.0037
PRO 2200.0037
GLY 2210.0035
ALA 2220.0033
PHE 2230.0031
LYS 2240.0033
GLU 2250.0031
ILE 2260.0029
ARG 2270.0027
LEU 2280.0026
HIS 2290.0025
LYS 2300.0025
LEU 2310.0027
THR 2320.0028
LEU 2330.0030
ARG 2340.0031
ASN 2350.0033
ASN 2360.0034
PHE 2370.0036
ASP 2380.0038
SER 2390.0039
LEU 2400.0039
ASN 2410.0040
VAL 2420.0039
MET 2430.0036
LYS 2440.0037
THR 2450.0038
CYS 2460.0035
ILE 2470.0034
GLN 2480.0036
GLY 2490.0035
LEU 2500.0033
ALA 2510.0034
GLY 2520.0033
LEU 2530.0030
GLU 2540.0029
VAL 2550.0027
HIS 2560.0026
ARG 2570.0025
LEU 2580.0027
VAL 2590.0027
LEU 2600.0029
GLY 2610.0031
GLU 2620.0032
PHE 2630.0033
ARG 2640.0034
ASN 2650.0036
GLU 2660.0036
GLY 2670.0037
ASN 2680.0036
LEU 2690.0037
GLU 2700.0040
LYS 2710.0039
PHE 2720.0037
ASP 2730.0039
LYS 2740.0038
SER 2750.0039
ALA 2760.0036
LEU 2770.0035
GLU 2780.0037
GLY 2790.0036
LEU 2800.0033
CYS 2810.0035
ASN 2820.0035
LEU 2830.0032
THR 2840.0031
ILE 2850.0029
GLU 2860.0028
GLU 2870.0026
PHE 2880.0027
ARG 2890.0027
LEU 2900.0029
ALA 2910.0028
TYR 2920.0031
LEU 2930.0032
ASP 2940.0034
TYR 2950.0035
TYR 2960.0036
LEU 2970.0036
ASP 2980.0037
GLY 2990.0036
ILE 3000.0035
ILE 3010.0037
ASP 3020.0037
LEU 3030.0036
PHE 3040.0034
ASN 3050.0035
CYS 3060.0034
LEU 3070.0032
THR 3080.0033
ASN 3090.0032
VAL 3100.0030
SER 3110.0028
SER 3120.0026
PHE 3130.0027
SER 3140.0026
LEU 3150.0028
VAL 3160.0027
SER 3170.0028
VAL 3180.0030
THR 3190.0032
ILE 3200.0033
GLU 3210.0035
ARG 3220.0036
VAL 3230.0034
LYS 3240.0035
ASP 3250.0035
PHE 3260.0033
SER 3270.0035
TYR 3280.0036
ASN 3290.0035
PHE 3300.0033
GLY 3310.0032
TRP 3320.0030
GLN 3330.0028
HIS 3340.0026
LEU 3350.0026
GLU 3360.0025
LEU 3370.0026
VAL 3380.0025
ASN 3390.0026
CYS 3400.0028
LYS 3410.0030
PHE 3420.0031
GLY 3430.0033
GLN 3440.0033
PHE 3450.0031
PRO 3460.0031
THR 3470.0034
LEU 3480.0032
LYS 3490.0033
LEU 3500.0032
LYS 3510.0033
SER 3520.0032
LEU 3530.0029
LYS 3540.0026
ARG 3550.0024
LEU 3560.0024
THR 3570.0023
PHE 3580.0024
THR 3590.0023
SER 3600.0023
ASN 3610.0026
LYS 3620.0028
GLY 3630.0030
GLY 3640.0031
ASN 3650.0030
ALA 3660.0030
PHE 3670.0032
SER 3680.0034
GLU 3690.0033
VAL 3700.0032
ASP 3710.0033
LEU 3720.0031
PRO 3730.0032
SER 3740.0030
LEU 3750.0027
GLU 3760.0023
PHE 3770.0021
LEU 3780.0022
ASP 3790.0020
LEU 3800.0022
SER 3810.0020
ARG 3820.0020
ASN 3830.0024
GLY 3840.0025
LEU 3850.0027
SER 3860.0030
PHE 3870.0031
LYS 3880.0036
GLY 3890.0036
CYS 3900.0031
CYS 3910.0029
SER 3920.0030
GLN 3930.0031
SER 3940.0035
ASP 3950.0033
PHE 3960.0031
GLY 3970.0033
THR 3980.0030
ILE 3990.0028
SER 4000.0026
LEU 4010.0023
LYS 4020.0018
TYR 4030.0017
LEU 4040.0018
ASP 4050.0017
LEU 4060.0020
SER 4070.0018
PHE 4080.0018
ASN 4090.0023
GLY 4100.0027
VAL 4110.0031
ILE 4120.0031
THR 4130.0035
MET 4140.0033
SER 4150.0038
SER 4160.0035
ASN 4170.0030
PHE 4180.0027
LEU 4190.0030
GLY 4200.0029
LEU 4210.0024
GLU 4220.0021
GLN 4230.0018
LEU 4240.0016
GLU 4250.0010
HIS 4260.0009
LEU 4270.0014
ASP 4280.0013
PHE 4290.0018
GLN 4300.0015
HIS 4310.0019
SER 4320.0023
ASN 4330.0028
LEU 4340.0030
LYS 4350.0036
GLN 4360.0038
MET 4370.0035
SER 4380.0040
GLU 4390.0044
PHE 4400.0040
SER 4410.0033
VAL 4420.0030
PHE 4430.0024
LEU 4440.0026
SER 4450.0024
LEU 4460.0018
ARG 4470.0014
ASN 4480.0010
LEU 4490.0009
ILE 4500.0003
TYR 4510.0005
LEU 4520.0011
ASP 4530.0012
ILE 4540.0019
SER 4550.0019
HIS 4560.0023
THR 4570.0025
HIS 4580.0032
THR 4590.0034
ARG 4600.0041
VAL 4610.0041
ALA 4620.0046
PHE 4630.0044
ASN 4640.0041
GLY 4650.0037
ILE 4660.0033
PHE 4670.0026
ASN 4680.0027
GLY 4690.0022
LEU 4700.0016
SER 4710.0013
SER 4720.0006
LEU 4730.0009
GLU 4740.0010
VAL 4750.0011
LEU 4760.0015
LYS 4770.0016
MET 4780.0022
ALA 4790.0025
GLY 4800.0029
ASN 4810.0033
SER 4820.0041
PHE 4830.0046
GLN 4840.0053
GLU 4850.0059
ASN 4860.0053
PHE 4870.0054
LEU 4880.0047
PRO 4890.0047
ASP 4900.0042
ILE 4910.0036
PHE 4920.0030
THR 4930.0031
GLU 4940.0024
LEU 4950.0020
ARG 4960.0019
ASN 4970.0014
LEU 4980.0017
THR 4990.0021
PHE 5000.0020
LEU 5010.0023
ASP 5020.0025
LEU 5030.0031
SER 5040.0033
GLN 5050.0035
CYS 5060.0038
GLN 5070.0047
LEU 5080.0049
GLU 5090.0057
GLN 5100.0058
LEU 5110.0053
SER 5120.0054
PRO 5130.0056
THR 5140.0049
ALA 5150.0043
PHE 5160.0038
ASN 5170.0040
SER 5180.0032
LEU 5190.0029
SER 5200.0031
SER 5210.0026
LEU 5220.0028
GLN 5230.0032
VAL 5240.0031
LEU 5250.0033
ASN 5260.0034
MET 5270.0040
SER 5280.0041
HIS 5290.0042
ASN 5300.0047
ASN 5310.0056
PHE 5320.0060
PHE 5330.0069
SER 5340.0070
LEU 5350.0066
ASP 5360.0065
THR 5370.0061
PHE 5380.0061
PRO 5390.0052
TYR 5400.0049
LYS 5410.0053
CYS 5420.0045
LEU 5430.0041
ASN 5440.0042
SER 5450.0038
LEU 5460.0040
GLN 5470.0044
VAL 5480.0042
LEU 5490.0044
ASP 5500.0043
TYR 5510.0049
SER 5520.0050
LEU 5530.0050
ASN 5540.0055
HIS 5550.0064
ILE 5560.0067
MET 5570.0077
THR 5580.0080
SER 5590.0077
LYS 5600.0082
LYS 5610.0079
GLN 5620.0082
GLU 5630.0074
LEU 5640.0074
GLN 5650.0073
HIS 5660.0065
PHE 5670.0059
PRO 5680.0054
SER 5690.0058
SER 5700.0051
LEU 5710.0053
ALA 5720.0056
PHE 5730.0053
LEU 5740.0055
ASN 5750.0053
LEU 5760.0059
THR 5770.0059
GLN 5780.0059
ASN 5790.0064
ASP 5800.0072
PHE 5810.0078
ALA 5820.0087
CYS 5830.0093
THR 5840.0101
CYS 5850.0107
GLU 5860.0104
HIS 5870.0095
GLN 5880.0099
SER 5890.0094
PHE 5900.0085
LEU 5910.0088
GLN 5920.0093
TRP 5930.0085
ILE 5940.0080
LYS 5950.0087
ASP 5960.0086
GLN 5970.0078
ARG 5980.0077
GLN 5990.0073
LEU 6000.0065
LEU 6010.0065
VAL 6020.0060
GLU 6030.0063
VAL 6040.0072
GLU 6050.0073
ARG 6060.0065
MET 6070.0070
GLU 6080.0076
CYS 6090.0082
ALA 6100.0080
THR 6110.0088
PRO 6120.0096
SER 6130.0095
ASP 6140.0101
LYS 6150.0095
GLN 6160.0087
GLY 6170.0081
MET 6180.0087
PRO 6190.0083
VAL 6200.0084
LEU 6210.0087
SER 6220.0095
LEU 6230.0098
ASN 6240.0107
ILE 6250.0107
THR 6260.0117
CYS 6270.0121
GLU 10.0100
ALA 20.0097
ALA 30.0098
ALA 40.0092
LYS 50.0084
MET 60.0084
GLN 70.0082
ARG 80.0074
LEU 90.0069
VAL 100.0071
LEU 110.0066
LEU 120.0057
LEU 130.0057
ALA 140.0058
ILE 150.0051
SER 160.0045
LEU 170.0047
LEU 180.0046
LEU 190.0039
TYR 200.0038
GLN 210.0041
ASP 220.0038
LEU 230.0032
PRO 240.0031
VAL 250.0033
ARG 260.0031
SER 270.0029
GLU 280.0028
PHE 290.0028
GLU 300.0026
LEU 310.0024
ASP 320.0024
ARG 330.0023
ILE 340.0021
CYS 350.0020
GLY 360.0018
TYR 370.0019
GLY 380.0020
THR 390.0017
ALA 400.0018
ARG 410.0021
CYS 420.0022
ARG 430.0023
LYS 440.0025
LYS 450.0025
CYS 460.0024
ARG 470.0024
SER 480.0025
GLN 490.0025
GLU 500.0025
TYR 510.0025
ARG 520.0025
ILE 530.0025
GLY 540.0025
ARG 550.0025
CYS 560.0024
PRO 570.0025
ASN 580.0026
THR 590.0027
TYR 600.0025
ALA 610.0024
CYS 620.0023
CYS 630.0023
LEU 640.0023
ARG 650.0024
LYS 660.0027
TRP 670.0028
ASP 680.0028
GLU 690.0031
SER 700.0031
LEU 710.0031
LEU 720.0034
ASN 730.0035
ARG 740.0035
THR 750.0036
LYS 760.0042
PRO 770.0047
GLU 780.0047
ALA 790.0053
ALA 800.0055
ALA 810.0072
LYS 820.0068
LYS 830.0066
GLU 840.0067
MET 850.0062
ASN 860.0065
LEU 870.0059
SER 880.0062
VAL 890.0058
GLY 900.0059
LEU 910.0059
GLY 920.0059
GLY 930.0067
GLY 940.0072
SER 950.0071
ASN 960.0070
LEU 970.0067
SER 980.0069
VAL 990.0065
GLY 1000.0068
LEU 1010.0063
GLY 1020.0066
GLU 1030.0063
ILE 1040.0062
GLY 1050.0059
GLY 1060.0056
GLY 1070.0054
SER 1080.0048
LYS 1090.0051
LEU 1100.0048
LEU 1110.0050
ASP 1120.0053
ILE 1130.0053
ASN 1140.0057
LEU 1150.0053
GLY 1160.0058
ARG 1170.0055
GLY 1180.0053
GLY 1190.0047
GLY 1200.0044
SER 1210.0047
MET 1220.0045
VAL 1230.0046
ASP 1240.0048
LEU 1250.0047
THR 1260.0052
PHE 1270.0051
GLY 1280.0057
GLY 1290.0055
VAL 1300.0056
GLY 1310.0056
GLY 1320.0048
GLY 1330.0042
SER 1340.0039
THR 1350.0035
PHE 1360.0033
THR 1370.0029
PHE 1380.0029
PHE 1390.0028
PRO 1400.0028
LEU 1410.0031
VAL 1420.0031
ILE 1430.0035
GLY 1440.0037
GLY 1450.0039
GLY 1460.0042
SER 1470.0045
ASP 1480.0044
ALA 1490.0044
MET 1500.0039
TYR 1510.0039
LEU 1520.0037
GLY 1530.0036
PHE 1540.0035
ALA 1550.0033
ALA 1560.0035
GLY 1570.0032
GLY 1580.0033
GLY 1590.0034
SER 1600.0039
ALA 1610.0043
GLY 1620.0050
GLY 1630.0052
GLU 1640.0051
ASN 1650.0045
HIS 1660.0045
VAL 1670.0037
ALA 1680.0038
PHE 1690.0034
GLY 1700.0033
PRO 1710.0036
GLY 1720.0027
PRO 1730.0018
GLY 1740.0021
VAL 1750.0024
ASP 1760.0033
LEU 1770.0033
THR 1780.0041
PHE 1790.0042
GLY 1800.0051
GLY 1810.0059
VAL 1820.0053
GLN 1830.0048
PHE 1840.0040
ALA 1850.0039
MET 1860.0036
VAL 1870.0036
ASN 1880.0028
ASN 1890.0052
GLY 1900.0059
PRO 1910.0126
GLY 1920.0187
PRO 1930.0326
GLY 1940.0440
GLU 1950.0394
SER 1960.0465
PHE 1970.0472
THR 1980.0545
ALA 1990.0533
GLN 2000.0610
PRO 2010.0610
ALA 2020.0668
ASP 2030.0630
MET 2040.0595
GLN 2050.0658
ALA 2060.0649
GLY 2070.0689
ILE 2080.0604
LYS 2090.0637
GLY 2100.0653
PRO 2110.0579
GLY 2120.0721
PRO 2130.0807
GLY 2140.0717
GLY 2150.0522
SER 2160.0379
ILE 2170.0297
GLN 2180.0218
VAL 2190.0128
ILE 2200.0088
ASN 2210.0048
GLY 2220.0050
SER 2230.0071
THR 2240.0082
ILE 2250.0087
GLY 2260.0103
THR 2270.0117
GLY 2280.0111
SER 2290.0112
LYS 2300.0090
LYS 2310.0080
THR 2320.0063
ILE 2330.0054
LEU 2340.0037
ILE 2350.0032
TYR 2360.0029
SER 2370.0031
ILE 2380.0029
ILE 2390.0031
GLY 2400.0030
VAL 2410.0030
LYS 2420.0029
LYS 2430.0029
GLY 2440.0029
THR 2450.0029
LEU 2460.0024
ALA 2470.0026
TRP 2480.0029
ALA 2490.0032
ARG 2500.0034
THR 2510.0035
GLY 2520.0041
PHE 2530.0048
SER 2540.0058
PRO 2550.0065
ALA 2560.0081
LYS 2570.0094
LYS 2580.0091
LEU 2590.0091
ASN 2600.0093
ALA 2610.0069
GLY 2620.0063
VAL 2630.0059
VAL 2640.0052
ARG 2650.0051
VAL 2660.0044
PHE 2670.0040
PHE 2680.0039
LEU 2690.0034
ASN 2700.0032
GLN 2710.0026
LYS 2720.0021
LYS 2730.0019
ALA 2740.0019
LYS 2750.0017
ASP 2760.0010
VAL 2770.0007
LEU 2780.0014
ARG 2790.0024
LYS 2800.0023
THR 2810.0046
SER 2820.0110
ARG 2830.0136
PRO 2840.0199
MET 2850.0251
VAL 2860.0364
ASP 2870.0534
LEU 2880.0565
THR 2890.0752
PHE 2900.0874
GLY 2910.1077
GLY 2920.1133

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.