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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0698
GLU 270.0151
PRO 280.0167
CYS 290.0118
VAL 300.0159
GLU 310.0146
VAL 320.0184
VAL 330.0155
PRO 340.0093
ASN 350.0027
ILE 360.0100
THR 370.0096
TYR 380.0066
GLN 390.0089
CYS 400.0045
MET 410.0076
GLU 420.0071
LEU 430.0056
ASN 440.0031
PHE 450.0018
TYR 460.0047
LYS 470.0061
ILE 480.0065
PRO 490.0046
ASP 500.0098
ASN 510.0097
LEU 520.0054
PRO 530.0061
PHE 540.0109
SER 550.0104
THR 560.0079
LYS 570.0105
ASN 580.0100
LEU 590.0078
ASP 600.0076
LEU 610.0057
SER 620.0069
PHE 630.0068
ASN 640.0048
PRO 650.0053
LEU 660.0062
ARG 670.0086
HIS 680.0081
LEU 690.0076
GLY 700.0078
SER 710.0073
TYR 720.0067
SER 730.0068
PHE 740.0077
PHE 750.0083
SER 760.0098
PHE 770.0096
PRO 780.0112
GLU 790.0112
LEU 800.0101
GLN 810.0105
VAL 820.0075
LEU 830.0071
ASP 840.0068
LEU 850.0066
SER 860.0067
ARG 870.0075
CYS 880.0074
GLU 890.0086
ILE 900.0077
GLN 910.0085
THR 920.0074
ILE 930.0062
GLU 940.0068
ASP 950.0062
GLY 960.0053
ALA 970.0053
TYR 980.0054
GLN 990.0049
SER 1000.0059
LEU 1010.0064
SER 1020.0030
HIS 1030.0052
LEU 1040.0046
SER 1050.0059
THR 1060.0056
LEU 1070.0019
ILE 1080.0028
LEU 1090.0024
THR 1100.0031
GLY 1110.0037
ASN 1120.0054
PRO 1130.0061
ILE 1140.0050
GLN 1150.0061
SER 1160.0066
LEU 1170.0046
ALA 1180.0063
LEU 1190.0072
GLY 1200.0061
ALA 1210.0041
PHE 1220.0034
SER 1230.0035
GLY 1240.0033
LEU 1250.0040
SER 1260.0049
SER 1270.0062
LEU 1280.0065
GLN 1290.0082
LYS 1300.0080
LEU 1310.0071
VAL 1320.0055
ALA 1330.0044
VAL 1340.0045
GLU 1350.0035
THR 1360.0028
ASN 1370.0049
LEU 1380.0052
ALA 1390.0044
SER 1400.0049
LEU 1410.0062
GLU 1420.0070
ASN 1430.0067
PHE 1440.0072
PRO 1450.0079
ILE 1460.0088
GLY 1470.0104
HIS 1480.0100
LEU 1490.0098
LYS 1500.0115
THR 1510.0113
LEU 1520.0108
LYS 1530.0109
GLU 1540.0098
LEU 1550.0086
ASN 1560.0079
VAL 1570.0056
ALA 1580.0056
HIS 1590.0053
ASN 1600.0046
LEU 1610.0038
ILE 1620.0056
GLN 1630.0055
SER 1640.0055
PHE 1650.0061
LYS 1660.0052
LEU 1670.0069
PRO 1680.0080
GLU 1690.0089
TYR 1700.0108
PHE 1710.0100
SER 1720.0111
ASN 1730.0114
LEU 1740.0114
THR 1750.0118
ASN 1760.0120
LEU 1770.0095
GLU 1780.0091
HIS 1790.0087
LEU 1800.0070
ASP 1810.0069
LEU 1820.0055
SER 1830.0063
SER 1840.0069
ASN 1850.0059
LYS 1860.0053
ILE 1870.0084
GLN 1880.0086
SER 1890.0079
ILE 1900.0073
TYR 1910.0065
CYS 1920.0059
THR 1930.0055
ASP 1940.0061
LEU 1950.0063
ARG 1960.0064
VAL 1970.0075
LEU 1980.0070
HIS 1990.0061
GLN 2000.0072
MET 2010.0078
PRO 2020.0058
LEU 2030.0058
LEU 2040.0060
ASN 2050.0061
LEU 2060.0061
SER 2070.0059
LEU 2080.0055
ASP 2090.0071
LEU 2100.0069
SER 2110.0091
LEU 2120.0093
ASN 2130.0093
PRO 2140.0094
MET 2150.0091
ASN 2160.0091
PHE 2170.0096
ILE 2180.0084
GLN 2190.0073
PRO 2200.0074
GLY 2210.0062
ALA 2220.0056
PHE 2230.0058
LYS 2240.0055
GLU 2250.0052
ILE 2260.0056
ARG 2270.0032
LEU 2280.0040
HIS 2290.0046
LYS 2300.0053
LEU 2310.0056
THR 2320.0087
LEU 2330.0090
ARG 2340.0092
ASN 2350.0101
ASN 2360.0108
PHE 2370.0126
ASP 2380.0139
SER 2390.0123
LEU 2400.0102
ASN 2410.0117
VAL 2420.0125
MET 2430.0103
LYS 2440.0091
THR 2450.0106
CYS 2460.0107
ILE 2470.0081
GLN 2480.0077
GLY 2490.0082
LEU 2500.0069
ALA 2510.0054
GLY 2520.0032
LEU 2530.0033
GLU 2540.0035
VAL 2550.0032
HIS 2560.0033
ARG 2570.0027
LEU 2580.0032
VAL 2590.0045
LEU 2600.0050
GLY 2610.0059
GLU 2620.0085
PHE 2630.0097
ARG 2640.0101
ASN 2650.0119
GLU 2660.0118
GLY 2670.0123
ASN 2680.0098
LEU 2690.0088
GLU 2700.0085
LYS 2710.0073
PHE 2720.0028
ASP 2730.0032
LYS 2740.0033
SER 2750.0041
ALA 2760.0038
LEU 2770.0026
GLU 2780.0032
GLY 2790.0041
LEU 2800.0027
CYS 2810.0019
ASN 2820.0025
LEU 2830.0023
THR 2840.0022
ILE 2850.0023
GLU 2860.0026
GLU 2870.0024
PHE 2880.0026
ARG 2890.0037
LEU 2900.0040
ALA 2910.0052
TYR 2920.0098
LEU 2930.0069
ASP 2940.0069
TYR 2950.0052
TYR 2960.0077
LEU 2970.0101
ASP 2980.0112
GLY 2990.0097
ILE 3000.0076
ILE 3010.0077
ASP 3020.0053
LEU 3030.0042
PHE 3040.0045
ASN 3050.0044
CYS 3060.0025
LEU 3070.0037
THR 3080.0039
ASN 3090.0032
VAL 3100.0033
SER 3110.0035
SER 3120.0043
PHE 3130.0051
SER 3140.0060
LEU 3150.0069
VAL 3160.0076
SER 3170.0104
VAL 3180.0100
THR 3190.0113
ILE 3200.0111
GLU 3210.0126
ARG 3220.0122
VAL 3230.0103
LYS 3240.0101
ASP 3250.0100
PHE 3260.0081
SER 3270.0082
TYR 3280.0079
ASN 3290.0068
PHE 3300.0059
GLY 3310.0047
TRP 3320.0051
GLN 3330.0044
HIS 3340.0046
LEU 3350.0051
GLU 3360.0054
LEU 3370.0074
VAL 3380.0081
ASN 3390.0096
CYS 3400.0099
LYS 3410.0108
PHE 3420.0104
GLY 3430.0110
GLN 3440.0088
PHE 3450.0065
PRO 3460.0071
THR 3470.0067
LEU 3480.0061
LYS 3490.0065
LEU 3500.0062
LYS 3510.0061
SER 3520.0051
LEU 3530.0041
LYS 3540.0024
ARG 3550.0023
LEU 3560.0030
THR 3570.0040
PHE 3580.0044
THR 3590.0054
SER 3600.0072
ASN 3610.0069
LYS 3620.0085
GLY 3630.0082
GLY 3640.0068
ASN 3650.0047
ALA 3660.0042
PHE 3670.0020
SER 3680.0022
GLU 3690.0033
VAL 3700.0035
ASP 3710.0051
LEU 3720.0049
PRO 3730.0053
SER 3740.0042
LEU 3750.0031
GLU 3760.0021
PHE 3770.0024
LEU 3780.0023
ASP 3790.0032
LEU 3800.0029
SER 3810.0046
ARG 3820.0074
ASN 3830.0061
GLY 3840.0072
LEU 3850.0049
SER 3860.0059
PHE 3870.0089
LYS 3880.0116
GLY 3890.0124
CYS 3900.0095
CYS 3910.0084
SER 3920.0081
GLN 3930.0079
SER 3940.0079
ASP 3950.0056
PHE 3960.0045
GLY 3970.0054
THR 3980.0050
ILE 3990.0052
SER 4000.0045
LEU 4010.0032
LYS 4020.0030
TYR 4030.0021
LEU 4040.0021
ASP 4050.0039
LEU 4060.0050
SER 4070.0068
PHE 4080.0097
ASN 4090.0090
GLY 4100.0114
VAL 4110.0124
ILE 4120.0124
THR 4130.0144
MET 4140.0132
SER 4150.0153
SER 4160.0136
ASN 4170.0106
PHE 4180.0086
LEU 4190.0110
GLY 4200.0103
LEU 4210.0077
GLU 4220.0075
GLN 4230.0070
LEU 4240.0042
GLU 4250.0044
HIS 4260.0028
LEU 4270.0019
ASP 4280.0043
PHE 4290.0061
GLN 4300.0080
HIS 4310.0102
SER 4320.0113
ASN 4330.0140
LEU 4340.0124
LYS 4350.0153
GLN 4360.0162
MET 4370.0115
SER 4380.0123
GLU 4390.0150
PHE 4400.0129
SER 4410.0095
VAL 4420.0096
PHE 4430.0072
LEU 4440.0093
SER 4450.0098
LEU 4460.0071
ARG 4470.0084
ASN 4480.0079
LEU 4490.0051
ILE 4500.0053
TYR 4510.0036
LEU 4520.0020
ASP 4530.0040
ILE 4540.0049
SER 4550.0068
HIS 4560.0089
THR 4570.0103
HIS 4580.0115
THR 4590.0089
ARG 4600.0087
VAL 4610.0058
ALA 4620.0080
PHE 4630.0058
ASN 4640.0036
GLY 4650.0037
ILE 4660.0049
PHE 4670.0042
ASN 4680.0046
GLY 4690.0053
LEU 4700.0041
SER 4710.0050
SER 4720.0050
LEU 4730.0040
GLU 4740.0042
VAL 4750.0036
LEU 4760.0030
LYS 4770.0034
MET 4780.0040
ALA 4790.0058
GLY 4800.0070
ASN 4810.0062
SER 4820.0104
PHE 4830.0086
GLN 4840.0082
GLU 4850.0114
ASN 4860.0125
PHE 4870.0122
LEU 4880.0100
PRO 4890.0097
ASP 4900.0084
ILE 4910.0066
PHE 4920.0056
THR 4930.0058
GLU 4940.0041
LEU 4950.0035
ARG 4960.0046
ASN 4970.0030
LEU 4980.0028
THR 4990.0032
PHE 5000.0028
LEU 5010.0032
ASP 5020.0040
LEU 5030.0051
SER 5040.0059
GLN 5050.0072
CYS 5060.0072
GLN 5070.0116
LEU 5080.0103
GLU 5090.0120
GLN 5100.0117
LEU 5110.0100
SER 5120.0126
PRO 5130.0122
THR 5140.0117
ALA 5150.0097
PHE 5160.0075
ASN 5170.0101
SER 5180.0091
LEU 5190.0064
SER 5200.0075
SER 5210.0058
LEU 5220.0033
GLN 5230.0042
VAL 5240.0029
LEU 5250.0019
ASN 5260.0038
MET 5270.0044
SER 5280.0062
HIS 5290.0083
ASN 5300.0081
ASN 5310.0089
PHE 5320.0050
PHE 5330.0050
SER 5340.0034
LEU 5350.0022
ASP 5360.0025
THR 5370.0037
PHE 5380.0068
PRO 5390.0073
TYR 5400.0050
LYS 5410.0074
CYS 5420.0100
LEU 5430.0071
ASN 5440.0094
SER 5450.0078
LEU 5460.0055
GLN 5470.0078
VAL 5480.0067
LEU 5490.0045
ASP 5500.0057
TYR 5510.0050
SER 5520.0072
LEU 5530.0084
ASN 5540.0069
HIS 5550.0063
ILE 5560.0046
MET 5570.0050
THR 5580.0049
SER 5590.0051
LYS 5600.0055
LYS 5610.0060
GLN 5620.0060
GLU 5630.0038
LEU 5640.0038
GLN 5650.0028
HIS 5660.0035
PHE 5670.0051
PRO 5680.0073
SER 5690.0106
SER 5700.0096
LEU 5710.0079
ALA 5720.0098
PHE 5730.0093
LEU 5740.0075
ASN 5750.0083
LEU 5760.0071
THR 5770.0080
GLN 5780.0079
ASN 5790.0070
ASP 5800.0068
PHE 5810.0072
ALA 5820.0119
CYS 5830.0052
THR 5840.0086
CYS 5850.0126
GLU 5860.0186
HIS 5870.0122
GLN 5880.0117
SER 5890.0140
PHE 5900.0107
LEU 5910.0075
GLN 5920.0101
TRP 5930.0106
ILE 5940.0073
LYS 5950.0081
ASP 5960.0106
GLN 5970.0088
ARG 5980.0071
GLN 5990.0075
LEU 6000.0084
LEU 6010.0072
VAL 6020.0099
GLU 6030.0088
VAL 6040.0068
GLU 6050.0061
ARG 6060.0057
MET 6070.0035
GLU 6080.0059
CYS 6090.0091
ALA 6100.0148
THR 6110.0181
PRO 6120.0229
SER 6130.0326
ASP 6140.0315
LYS 6150.0208
GLN 6160.0229
GLY 6170.0173
MET 6180.0133
PRO 6190.0078
VAL 6200.0024
LEU 6210.0079
SER 6220.0128
LEU 6230.0076
ASN 6240.0092
ILE 6250.0122
THR 6260.0150
CYS 6270.0169
GLU 10.0159
ALA 20.0090
ALA 30.0055
ALA 40.0100
LYS 50.0120
MET 60.0073
GLN 70.0098
ARG 80.0114
LEU 90.0100
VAL 100.0110
LEU 110.0054
LEU 120.0036
LEU 130.0050
ALA 140.0075
ILE 150.0068
SER 160.0082
LEU 170.0083
LEU 180.0095
LEU 190.0093
TYR 200.0088
GLN 210.0098
ASP 220.0091
LEU 230.0081
PRO 240.0087
VAL 250.0087
ARG 260.0197
SER 270.0127
GLU 280.0218
PHE 290.0223
GLU 300.0124
LEU 310.0080
ASP 320.0113
ARG 330.0113
ILE 340.0079
CYS 350.0079
GLY 360.0062
TYR 370.0046
GLY 380.0054
THR 390.0064
ALA 400.0089
ARG 410.0096
CYS 420.0105
ARG 430.0116
LYS 440.0130
LYS 450.0134
CYS 460.0098
ARG 470.0089
SER 480.0101
GLN 490.0113
GLU 500.0115
TYR 510.0127
ARG 520.0126
ILE 530.0163
GLY 540.0165
ARG 550.0156
CYS 560.0132
PRO 570.0137
ASN 580.0140
THR 590.0132
TYR 600.0139
ALA 610.0115
CYS 620.0116
CYS 630.0114
LEU 640.0124
ARG 650.0123
LYS 660.0125
TRP 670.0119
ASP 680.0096
GLU 690.0102
SER 700.0075
LEU 710.0081
LEU 720.0089
ASN 730.0069
ARG 740.0059
THR 750.0074
LYS 760.0119
PRO 770.0166
GLU 780.0159
ALA 790.0230
ALA 800.0255
ALA 810.0190
LYS 820.0179
LYS 830.0130
GLU 840.0102
MET 850.0066
ASN 860.0080
LEU 870.0069
SER 880.0085
VAL 890.0079
GLY 900.0094
LEU 910.0060
GLY 920.0277
GLY 930.0459
GLY 940.0384
SER 950.0169
ASN 960.0108
LEU 970.0094
SER 980.0103
VAL 990.0088
GLY 1000.0102
LEU 1010.0090
GLY 1020.0107
GLU 1030.0147
ILE 1040.0142
GLY 1050.0201
GLY 1060.0264
GLY 1070.0208
SER 1080.0168
LYS 1090.0111
LEU 1100.0101
LEU 1110.0052
ASP 1120.0113
ILE 1130.0118
ASN 1140.0189
LEU 1150.0163
GLY 1160.0259
ARG 1170.0137
GLY 1180.0181
GLY 1190.0309
GLY 1200.0302
SER 1210.0079
MET 1220.0072
VAL 1230.0067
ASP 1240.0058
LEU 1250.0057
THR 1260.0079
PHE 1270.0060
GLY 1280.0075
GLY 1290.0139
VAL 1300.0187
GLY 1310.0698
GLY 1320.0616
GLY 1330.0537
SER 1340.0446
THR 1350.0366
PHE 1360.0167
THR 1370.0142
PHE 1380.0106
PHE 1390.0119
PRO 1400.0161
LEU 1410.0145
VAL 1420.0180
ILE 1430.0243
GLY 1440.0377
GLY 1450.0415
GLY 1460.0213
SER 1470.0255
ASP 1480.0253
ALA 1490.0255
MET 1500.0188
TYR 1510.0072
LEU 1520.0049
GLY 1530.0059
PHE 1540.0099
ALA 1550.0157
ALA 1560.0318
GLY 1570.0307
GLY 1580.0340
GLY 1590.0367
SER 1600.0417
ALA 1610.0430
GLY 1620.0354
GLY 1630.0232
GLU 1640.0109
ASN 1650.0091
HIS 1660.0065
VAL 1670.0060
ALA 1680.0060
PHE 1690.0065
GLY 1700.0073
PRO 1710.0275
GLY 1720.0189
PRO 1730.0096
GLY 1740.0062
VAL 1750.0066
ASP 1760.0024
LEU 1770.0060
THR 1780.0011
PHE 1790.0028
GLY 1800.0059
GLY 1810.0268
VAL 1820.0280
GLN 1830.0231
PHE 1840.0243
ALA 1850.0246
MET 1860.0236
VAL 1870.0328
ASN 1880.0237
ASN 1890.0147
GLY 1900.0380
PRO 1910.0222
GLY 1920.0162
PRO 1930.0129
GLY 1940.0170
GLU 1950.0197
SER 1960.0227
PHE 1970.0134
THR 1980.0027
ALA 1990.0069
GLN 2000.0185
PRO 2010.0125
ALA 2020.0062
ASP 2030.0180
MET 2040.0131
GLN 2050.0162
ALA 2060.0127
GLY 2070.0156
ILE 2080.0183
LYS 2090.0218
GLY 2100.0472
PRO 2110.0141
GLY 2120.0099
PRO 2130.0145
GLY 2140.0132
GLY 2150.0158
SER 2160.0309
ILE 2170.0195
GLN 2180.0182
VAL 2190.0113
ILE 2200.0083
ASN 2210.0122
GLY 2220.0145
SER 2230.0084
THR 2240.0034
ILE 2250.0120
GLY 2260.0129
THR 2270.0132
GLY 2280.0066
SER 2290.0079
LYS 2300.0150
LYS 2310.0262
THR 2320.0317
ILE 2330.0176
LEU 2340.0160
ILE 2350.0159
TYR 2360.0089
SER 2370.0091
ILE 2380.0089
ILE 2390.0091
GLY 2400.0097
VAL 2410.0092
LYS 2420.0071
LYS 2430.0057
GLY 2440.0048
THR 2450.0056
LEU 2460.0132
ALA 2470.0087
TRP 2480.0057
ALA 2490.0030
ARG 2500.0090
THR 2510.0246
GLY 2520.0313
PHE 2530.0182
SER 2540.0242
PRO 2550.0234
ALA 2560.0331
LYS 2570.0200
LYS 2580.0103
LEU 2590.0120
ASN 2600.0043
ALA 2610.0100
GLY 2620.0201
VAL 2630.0127
VAL 2640.0186
ARG 2650.0225
VAL 2660.0162
PHE 2670.0093
PHE 2680.0086
LEU 2690.0062
ASN 2700.0073
GLN 2710.0092
LYS 2720.0070
LYS 2730.0033
ALA 2740.0059
LYS 2750.0052
ASP 2760.0049
VAL 2770.0127
LEU 2780.0142
ARG 2790.0114
LYS 2800.0154
THR 2810.0212
SER 2820.0118
ARG 2830.0127
PRO 2840.0099
MET 2850.0204
VAL 2860.0159
ASP 2870.0175
LEU 2880.0187
THR 2890.0186
PHE 2900.0109
GLY 2910.0228
GLY 2920.0346

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.