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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0943
GLU 270.0067
PRO 280.0066
CYS 290.0041
VAL 300.0051
GLU 310.0052
VAL 320.0061
VAL 330.0053
PRO 340.0036
ASN 350.0012
ILE 360.0031
THR 370.0029
TYR 380.0014
GLN 390.0017
CYS 400.0010
MET 410.0009
GLU 420.0010
LEU 430.0019
ASN 440.0030
PHE 450.0037
TYR 460.0052
LYS 470.0049
ILE 480.0045
PRO 490.0037
ASP 500.0055
ASN 510.0051
LEU 520.0035
PRO 530.0031
PHE 540.0049
SER 550.0042
THR 560.0031
LYS 570.0040
ASN 580.0037
LEU 590.0031
ASP 600.0026
LEU 610.0026
SER 620.0029
PHE 630.0028
ASN 640.0029
PRO 650.0038
LEU 660.0043
ARG 670.0045
HIS 680.0036
LEU 690.0030
GLY 700.0027
SER 710.0023
TYR 720.0027
SER 730.0030
PHE 740.0035
PHE 750.0038
SER 760.0046
PHE 770.0043
PRO 780.0050
GLU 790.0048
LEU 800.0042
GLN 810.0042
VAL 820.0030
LEU 830.0030
ASP 840.0029
LEU 850.0028
SER 860.0028
ARG 870.0038
CYS 880.0037
GLU 890.0038
ILE 900.0037
GLN 910.0037
THR 920.0025
ILE 930.0021
GLU 940.0016
ASP 950.0010
GLY 960.0011
ALA 970.0019
TYR 980.0020
GLN 990.0018
SER 1000.0023
LEU 1010.0024
SER 1020.0021
HIS 1030.0024
LEU 1040.0016
SER 1050.0016
THR 1060.0012
LEU 1070.0014
ILE 1080.0019
LEU 1090.0021
THR 1100.0026
GLY 1110.0031
ASN 1120.0034
PRO 1130.0031
ILE 1140.0027
GLN 1150.0022
SER 1160.0020
LEU 1170.0003
ALA 1180.0008
LEU 1190.0016
GLY 1200.0013
ALA 1210.0001
PHE 1220.0008
SER 1230.0011
GLY 1240.0010
LEU 1250.0009
SER 1260.0014
SER 1270.0020
LEU 1280.0020
GLN 1290.0023
LYS 1300.0021
LEU 1310.0020
VAL 1320.0022
ALA 1330.0024
VAL 1340.0029
GLU 1350.0041
THR 1360.0038
ASN 1370.0029
LEU 1380.0015
ALA 1390.0022
SER 1400.0020
LEU 1410.0022
GLU 1420.0024
ASN 1430.0017
PHE 1440.0018
PRO 1450.0020
ILE 1460.0026
GLY 1470.0044
HIS 1480.0041
LEU 1490.0035
LYS 1500.0042
THR 1510.0035
LEU 1520.0041
LYS 1530.0041
GLU 1540.0034
LEU 1550.0029
ASN 1560.0023
VAL 1570.0030
ALA 1580.0027
HIS 1590.0048
ASN 1600.0033
LEU 1610.0031
ILE 1620.0013
GLN 1630.0026
SER 1640.0035
PHE 1650.0040
LYS 1660.0048
LEU 1670.0045
PRO 1680.0041
GLU 1690.0042
TYR 1700.0043
PHE 1710.0048
SER 1720.0052
ASN 1730.0049
LEU 1740.0045
THR 1750.0047
ASN 1760.0044
LEU 1770.0035
GLU 1780.0037
HIS 1790.0032
LEU 1800.0025
ASP 1810.0021
LEU 1820.0019
SER 1830.0009
SER 1840.0013
ASN 1850.0014
LYS 1860.0028
ILE 1870.0033
GLN 1880.0031
SER 1890.0037
ILE 1900.0042
TYR 1910.0051
CYS 1920.0055
THR 1930.0058
ASP 1940.0058
LEU 1950.0055
ARG 1960.0058
VAL 1970.0059
LEU 1980.0060
HIS 1990.0063
GLN 2000.0063
MET 2010.0062
PRO 2020.0067
LEU 2030.0064
LEU 2040.0050
ASN 2050.0043
LEU 2060.0032
SER 2070.0033
LEU 2080.0029
ASP 2090.0028
LEU 2100.0028
SER 2110.0031
LEU 2120.0030
ASN 2130.0031
PRO 2140.0028
MET 2150.0024
ASN 2160.0025
PHE 2170.0041
ILE 2180.0041
GLN 2190.0046
PRO 2200.0044
GLY 2210.0048
ALA 2220.0045
PHE 2230.0043
LYS 2240.0044
GLU 2250.0045
ILE 2260.0045
ARG 2270.0036
LEU 2280.0035
HIS 2290.0034
LYS 2300.0033
LEU 2310.0032
THR 2320.0029
LEU 2330.0031
ARG 2340.0034
ASN 2350.0040
ASN 2360.0041
PHE 2370.0054
ASP 2380.0066
SER 2390.0058
LEU 2400.0047
ASN 2410.0063
VAL 2420.0057
MET 2430.0045
LYS 2440.0048
THR 2450.0057
CYS 2460.0050
ILE 2470.0048
GLN 2480.0054
GLY 2490.0056
LEU 2500.0047
ALA 2510.0046
GLY 2520.0039
LEU 2530.0036
GLU 2540.0031
VAL 2550.0030
HIS 2560.0026
ARG 2570.0020
LEU 2580.0019
VAL 2590.0018
LEU 2600.0016
GLY 2610.0020
GLU 2620.0054
PHE 2630.0071
ARG 2640.0089
ASN 2650.0099
GLU 2660.0089
GLY 2670.0076
ASN 2680.0058
LEU 2690.0044
GLU 2700.0046
LYS 2710.0035
PHE 2720.0038
ASP 2730.0034
LYS 2740.0036
SER 2750.0044
ALA 2760.0041
LEU 2770.0043
GLU 2780.0052
GLY 2790.0056
LEU 2800.0046
CYS 2810.0053
ASN 2820.0054
LEU 2830.0046
THR 2840.0040
ILE 2850.0031
GLU 2860.0024
GLU 2870.0020
PHE 2880.0017
ARG 2890.0017
LEU 2900.0019
ALA 2910.0025
TYR 2920.0048
LEU 2930.0045
ASP 2940.0052
TYR 2950.0047
TYR 2960.0047
LEU 2970.0048
ASP 2980.0047
GLY 2990.0037
ILE 3000.0033
ILE 3010.0031
ASP 3020.0034
LEU 3030.0035
PHE 3040.0035
ASN 3050.0039
CYS 3060.0044
LEU 3070.0037
THR 3080.0038
ASN 3090.0042
VAL 3100.0038
SER 3110.0038
SER 3120.0028
PHE 3130.0024
SER 3140.0022
LEU 3150.0020
VAL 3160.0020
SER 3170.0034
VAL 3180.0035
THR 3190.0036
ILE 3200.0036
GLU 3210.0038
ARG 3220.0034
VAL 3230.0020
LYS 3240.0022
ASP 3250.0020
PHE 3260.0010
SER 3270.0004
TYR 3280.0008
ASN 3290.0013
PHE 3300.0021
GLY 3310.0029
TRP 3320.0026
GLN 3330.0029
HIS 3340.0028
LEU 3350.0022
GLU 3360.0021
LEU 3370.0018
VAL 3380.0020
ASN 3390.0016
CYS 3400.0013
LYS 3410.0015
PHE 3420.0010
GLY 3430.0017
GLN 3440.0019
PHE 3450.0018
PRO 3460.0014
THR 3470.0008
LEU 3480.0009
LYS 3490.0010
LEU 3500.0012
LYS 3510.0016
SER 3520.0019
LEU 3530.0021
LYS 3540.0029
ARG 3550.0030
LEU 3560.0024
THR 3570.0032
PHE 3580.0028
THR 3590.0034
SER 3600.0035
ASN 3610.0026
LYS 3620.0023
GLY 3630.0018
GLY 3640.0022
ASN 3650.0028
ALA 3660.0036
PHE 3670.0041
SER 3680.0039
GLU 3690.0036
VAL 3700.0029
ASP 3710.0025
LEU 3720.0025
PRO 3730.0023
SER 3740.0020
LEU 3750.0023
GLU 3760.0025
PHE 3770.0035
LEU 3780.0037
ASP 3790.0041
LEU 3800.0042
SER 3810.0048
ARG 3820.0056
ASN 3830.0051
GLY 3840.0058
LEU 3850.0045
SER 3860.0050
PHE 3870.0070
LYS 3880.0080
GLY 3890.0080
CYS 3900.0067
CYS 3910.0059
SER 3920.0059
GLN 3930.0050
SER 3940.0057
ASP 3950.0056
PHE 3960.0043
GLY 3970.0044
THR 3980.0033
ILE 3990.0030
SER 4000.0018
LEU 4010.0023
LYS 4020.0022
TYR 4030.0031
LEU 4040.0037
ASP 4050.0046
LEU 4060.0053
SER 4070.0053
PHE 4080.0074
ASN 4090.0066
GLY 4100.0080
VAL 4110.0083
ILE 4120.0085
THR 4130.0092
MET 4140.0082
SER 4150.0091
SER 4160.0079
ASN 4170.0067
PHE 4180.0056
LEU 4190.0063
GLY 4200.0055
LEU 4210.0043
GLU 4220.0036
GLN 4230.0022
LEU 4240.0016
GLU 4250.0014
HIS 4260.0027
LEU 4270.0031
ASP 4280.0041
PHE 4290.0047
GLN 4300.0055
HIS 4310.0064
SER 4320.0078
ASN 4330.0091
LEU 4340.0078
LYS 4350.0095
GLN 4360.0099
MET 4370.0077
SER 4380.0079
GLU 4390.0094
PHE 4400.0084
SER 4410.0066
VAL 4420.0065
PHE 4430.0050
LEU 4440.0057
SER 4450.0056
LEU 4460.0041
ARG 4470.0041
ASN 4480.0031
LEU 4490.0019
ILE 4500.0017
TYR 4510.0017
LEU 4520.0020
ASP 4530.0029
ILE 4540.0033
SER 4550.0040
HIS 4560.0050
THR 4570.0063
HIS 4580.0069
THR 4590.0056
ARG 4600.0057
VAL 4610.0044
ALA 4620.0053
PHE 4630.0048
ASN 4640.0037
GLY 4650.0042
ILE 4660.0045
PHE 4670.0036
ASN 4680.0038
GLY 4690.0040
LEU 4700.0031
SER 4710.0030
SER 4720.0022
LEU 4730.0018
GLU 4740.0013
VAL 4750.0012
LEU 4760.0016
LYS 4770.0022
MET 4780.0026
ALA 4790.0032
GLY 4800.0039
ASN 4810.0034
SER 4820.0064
PHE 4830.0046
GLN 4840.0038
GLU 4850.0054
ASN 4860.0066
PHE 4870.0064
LEU 4880.0050
PRO 4890.0042
ASP 4900.0028
ILE 4910.0022
PHE 4920.0018
THR 4930.0011
GLU 4940.0009
LEU 4950.0012
ARG 4960.0010
ASN 4970.0014
LEU 4980.0013
THR 4990.0018
PHE 5000.0019
LEU 5010.0018
ASP 5020.0034
LEU 5030.0037
SER 5040.0044
GLN 5050.0052
CYS 5060.0050
GLN 5070.0076
LEU 5080.0064
GLU 5090.0071
GLN 5100.0064
LEU 5110.0050
SER 5120.0058
PRO 5130.0057
THR 5140.0049
ALA 5150.0034
PHE 5160.0020
ASN 5170.0039
SER 5180.0032
LEU 5190.0021
SER 5200.0037
SER 5210.0037
LEU 5220.0027
GLN 5230.0040
VAL 5240.0034
LEU 5250.0019
ASN 5260.0032
MET 5270.0036
SER 5280.0053
HIS 5290.0068
ASN 5300.0062
ASN 5310.0064
PHE 5320.0041
PHE 5330.0044
SER 5340.0032
LEU 5350.0018
ASP 5360.0025
THR 5370.0029
PHE 5380.0049
PRO 5390.0041
TYR 5400.0031
LYS 5410.0052
CYS 5420.0060
LEU 5430.0045
ASN 5440.0065
SER 5450.0061
LEU 5460.0044
GLN 5470.0059
VAL 5480.0050
LEU 5490.0032
ASP 5500.0039
TYR 5510.0033
SER 5520.0048
LEU 5530.0057
ASN 5540.0048
HIS 5550.0044
ILE 5560.0027
MET 5570.0020
THR 5580.0016
SER 5590.0014
LYS 5600.0021
LYS 5610.0024
GLN 5620.0044
GLU 5630.0042
LEU 5640.0023
GLN 5650.0029
HIS 5660.0041
PHE 5670.0042
PRO 5680.0056
SER 5690.0074
SER 5700.0071
LEU 5710.0055
ALA 5720.0054
PHE 5730.0048
LEU 5740.0034
ASN 5750.0040
LEU 5760.0034
THR 5770.0035
GLN 5780.0034
ASN 5790.0027
ASP 5800.0023
PHE 5810.0021
ALA 5820.0061
CYS 5830.0029
THR 5840.0056
CYS 5850.0080
GLU 5860.0108
HIS 5870.0060
GLN 5880.0061
SER 5890.0070
PHE 5900.0046
LEU 5910.0035
GLN 5920.0053
TRP 5930.0048
ILE 5940.0031
LYS 5950.0044
ASP 5960.0052
GLN 5970.0038
ARG 5980.0031
GLN 5990.0030
LEU 6000.0031
LEU 6010.0026
VAL 6020.0047
GLU 6030.0040
VAL 6040.0032
GLU 6050.0030
ARG 6060.0020
MET 6070.0022
GLU 6080.0037
CYS 6090.0046
ALA 6100.0071
THR 6110.0089
PRO 6120.0125
SER 6130.0166
ASP 6140.0159
LYS 6150.0108
GLN 6160.0119
GLY 6170.0100
MET 6180.0080
PRO 6190.0059
VAL 6200.0024
LEU 6210.0050
SER 6220.0075
LEU 6230.0042
ASN 6240.0056
ILE 6250.0079
THR 6260.0111
CYS 6270.0133
GLU 10.0043
ALA 20.0068
ALA 30.0056
ALA 40.0034
LYS 50.0047
MET 60.0027
GLN 70.0036
ARG 80.0041
LEU 90.0032
VAL 100.0027
LEU 110.0024
LEU 120.0010
LEU 130.0004
ALA 140.0030
ILE 150.0039
SER 160.0045
LEU 170.0017
LEU 180.0048
LEU 190.0067
TYR 200.0043
GLN 210.0022
ASP 220.0040
LEU 230.0045
PRO 240.0033
VAL 250.0036
ARG 260.0084
SER 270.0078
GLU 280.0070
PHE 290.0074
GLU 300.0073
LEU 310.0064
ASP 320.0057
ARG 330.0053
ILE 340.0061
CYS 350.0062
GLY 360.0055
TYR 370.0053
GLY 380.0071
THR 390.0069
ALA 400.0078
ARG 410.0061
CYS 420.0038
ARG 430.0050
LYS 440.0104
LYS 450.0135
CYS 460.0119
ARG 470.0116
SER 480.0149
GLN 490.0125
GLU 500.0117
TYR 510.0163
ARG 520.0117
ILE 530.0142
GLY 540.0106
ARG 550.0075
CYS 560.0110
PRO 570.0177
ASN 580.0163
THR 590.0125
TYR 600.0067
ALA 610.0038
CYS 620.0051
CYS 630.0062
LEU 640.0095
ARG 650.0105
LYS 660.0174
TRP 670.0134
ASP 680.0099
GLU 690.0074
SER 700.0054
LEU 710.0038
LEU 720.0024
ASN 730.0065
ARG 740.0058
THR 750.0077
LYS 760.0251
PRO 770.0448
GLU 780.0529
ALA 790.0771
ALA 800.0790
ALA 810.0258
LYS 820.0142
LYS 830.0207
GLU 840.0221
MET 850.0314
ASN 860.0284
LEU 870.0183
SER 880.0142
VAL 890.0084
GLY 900.0041
LEU 910.0104
GLY 920.0127
GLY 930.0239
GLY 940.0292
SER 950.0191
ASN 960.0160
LEU 970.0182
SER 980.0227
VAL 990.0234
GLY 1000.0305
LEU 1010.0317
GLY 1020.0200
GLU 1030.0055
ILE 1040.0181
GLY 1050.0258
GLY 1060.0156
GLY 1070.0184
SER 1080.0177
LYS 1090.0221
LEU 1100.0266
LEU 1110.0237
ASP 1120.0166
ILE 1130.0187
ASN 1140.0162
LEU 1150.0289
GLY 1160.0441
ARG 1170.0399
GLY 1180.0318
GLY 1190.0449
GLY 1200.0261
SER 1210.0226
MET 1220.0189
VAL 1230.0160
ASP 1240.0116
LEU 1250.0096
THR 1260.0066
PHE 1270.0108
GLY 1280.0153
GLY 1290.0175
VAL 1300.0232
GLY 1310.0235
GLY 1320.0173
GLY 1330.0109
SER 1340.0123
THR 1350.0086
PHE 1360.0049
THR 1370.0037
PHE 1380.0029
PHE 1390.0044
PRO 1400.0029
LEU 1410.0226
VAL 1420.0306
ILE 1430.0292
GLY 1440.0398
GLY 1450.0351
GLY 1460.0943
SER 1470.0940
ASP 1480.0914
ALA 1490.0601
MET 1500.0324
TYR 1510.0275
LEU 1520.0177
GLY 1530.0146
PHE 1540.0057
ALA 1550.0051
ALA 1560.0103
GLY 1570.0089
GLY 1580.0079
GLY 1590.0070
SER 1600.0068
ALA 1610.0113
GLY 1620.0134
GLY 1630.0103
GLU 1640.0091
ASN 1650.0055
HIS 1660.0058
VAL 1670.0096
ALA 1680.0140
PHE 1690.0184
GLY 1700.0222
PRO 1710.0206
GLY 1720.0148
PRO 1730.0096
GLY 1740.0139
VAL 1750.0111
ASP 1760.0106
LEU 1770.0108
THR 1780.0082
PHE 1790.0083
GLY 1800.0064
GLY 1810.0121
VAL 1820.0151
GLN 1830.0136
PHE 1840.0172
ALA 1850.0173
MET 1860.0190
VAL 1870.0225
ASN 1880.0145
ASN 1890.0135
GLY 1900.0266
PRO 1910.0154
GLY 1920.0092
PRO 1930.0036
GLY 1940.0112
GLU 1950.0109
SER 1960.0195
PHE 1970.0117
THR 1980.0116
ALA 1990.0116
GLN 2000.0087
PRO 2010.0080
ALA 2020.0039
ASP 2030.0041
MET 2040.0058
GLN 2050.0102
ALA 2060.0117
GLY 2070.0091
ILE 2080.0082
LYS 2090.0044
GLY 2100.0044
PRO 2110.0086
GLY 2120.0086
PRO 2130.0028
GLY 2140.0081
GLY 2150.0103
SER 2160.0074
ILE 2170.0052
GLN 2180.0060
VAL 2190.0092
ILE 2200.0138
ASN 2210.0214
GLY 2220.0100
SER 2230.0054
THR 2240.0031
ILE 2250.0140
GLY 2260.0103
THR 2270.0090
GLY 2280.0091
SER 2290.0115
LYS 2300.0098
LYS 2310.0182
THR 2320.0206
ILE 2330.0115
LEU 2340.0102
ILE 2350.0131
TYR 2360.0091
SER 2370.0109
ILE 2380.0087
ILE 2390.0082
GLY 2400.0067
VAL 2410.0040
LYS 2420.0032
LYS 2430.0039
GLY 2440.0045
THR 2450.0035
LEU 2460.0054
ALA 2470.0029
TRP 2480.0043
ALA 2490.0046
ARG 2500.0068
THR 2510.0117
GLY 2520.0248
PHE 2530.0104
SER 2540.0197
PRO 2550.0230
ALA 2560.0243
LYS 2570.0121
LYS 2580.0037
LEU 2590.0095
ASN 2600.0080
ALA 2610.0217
GLY 2620.0220
VAL 2630.0053
VAL 2640.0258
ARG 2650.0301
VAL 2660.0164
PHE 2670.0131
PHE 2680.0176
LEU 2690.0226
ASN 2700.0313
GLN 2710.0206
LYS 2720.0177
LYS 2730.0190
ALA 2740.0188
LYS 2750.0159
ASP 2760.0209
VAL 2770.0193
LEU 2780.0223
ARG 2790.0239
LYS 2800.0214
THR 2810.0279
SER 2820.0365
ARG 2830.0223
PRO 2840.0240
MET 2850.0240
VAL 2860.0266
ASP 2870.0251
LEU 2880.0219
THR 2890.0178
PHE 2900.0071
GLY 2910.0181
GLY 2920.0334

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.