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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 104  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0867
GLU 270.0051
PRO 280.0049
CYS 290.0033
VAL 300.0031
GLU 310.0024
VAL 320.0021
VAL 330.0016
PRO 340.0016
ASN 350.0031
ILE 360.0029
THR 370.0017
TYR 380.0012
GLN 390.0010
CYS 400.0013
MET 410.0012
GLU 420.0013
LEU 430.0021
ASN 440.0021
PHE 450.0026
TYR 460.0034
LYS 470.0030
ILE 480.0031
PRO 490.0031
ASP 500.0047
ASN 510.0047
LEU 520.0034
PRO 530.0035
PHE 540.0044
SER 550.0039
THR 560.0030
LYS 570.0032
ASN 580.0025
LEU 590.0021
ASP 600.0015
LEU 610.0013
SER 620.0013
PHE 630.0012
ASN 640.0012
PRO 650.0018
LEU 660.0025
ARG 670.0031
HIS 680.0027
LEU 690.0023
GLY 700.0023
SER 710.0020
TYR 720.0020
SER 730.0016
PHE 740.0022
PHE 750.0026
SER 760.0030
PHE 770.0029
PRO 780.0033
GLU 790.0031
LEU 800.0028
GLN 810.0028
VAL 820.0021
LEU 830.0020
ASP 840.0019
LEU 850.0019
SER 860.0019
ARG 870.0023
CYS 880.0023
GLU 890.0028
ILE 900.0027
GLN 910.0030
THR 920.0023
ILE 930.0019
GLU 940.0020
ASP 950.0017
GLY 960.0016
ALA 970.0013
TYR 980.0012
GLN 990.0012
SER 1000.0013
LEU 1010.0015
SER 1020.0010
HIS 1030.0014
LEU 1040.0012
SER 1050.0014
THR 1060.0012
LEU 1070.0011
ILE 1080.0014
LEU 1090.0017
THR 1100.0019
GLY 1110.0023
ASN 1120.0022
PRO 1130.0025
ILE 1140.0022
GLN 1150.0024
SER 1160.0022
LEU 1170.0007
ALA 1180.0009
LEU 1190.0010
GLY 1200.0012
ALA 1210.0008
PHE 1220.0004
SER 1230.0006
GLY 1240.0006
LEU 1250.0005
SER 1260.0008
SER 1270.0005
LEU 1280.0005
GLN 1290.0009
LYS 1300.0009
LEU 1310.0006
VAL 1320.0009
ALA 1330.0009
VAL 1340.0014
GLU 1350.0017
THR 1360.0015
ASN 1370.0009
LEU 1380.0011
ALA 1390.0020
SER 1400.0031
LEU 1410.0035
GLU 1420.0036
ASN 1430.0030
PHE 1440.0025
PRO 1450.0029
ILE 1460.0028
GLY 1470.0036
HIS 1480.0033
LEU 1490.0023
LYS 1500.0029
THR 1510.0019
LEU 1520.0013
LYS 1530.0014
GLU 1540.0013
LEU 1550.0012
ASN 1560.0012
VAL 1570.0004
ALA 1580.0012
HIS 1590.0011
ASN 1600.0005
LEU 1610.0014
ILE 1620.0031
GLN 1630.0041
SER 1640.0046
PHE 1650.0041
LYS 1660.0051
LEU 1670.0049
PRO 1680.0053
GLU 1690.0055
TYR 1700.0052
PHE 1710.0047
SER 1720.0047
ASN 1730.0045
LEU 1740.0036
THR 1750.0034
ASN 1760.0026
LEU 1770.0013
GLU 1780.0010
HIS 1790.0008
LEU 1800.0011
ASP 1810.0012
LEU 1820.0007
SER 1830.0014
SER 1840.0012
ASN 1850.0013
LYS 1860.0026
ILE 1870.0036
GLN 1880.0048
SER 1890.0055
ILE 1900.0052
TYR 1910.0066
CYS 1920.0062
THR 1930.0067
ASP 1940.0063
LEU 1950.0053
ARG 1960.0058
VAL 1970.0058
LEU 1980.0050
HIS 1990.0050
GLN 2000.0055
MET 2010.0051
PRO 2020.0044
LEU 2030.0045
LEU 2040.0035
ASN 2050.0030
LEU 2060.0018
SER 2070.0019
LEU 2080.0016
ASP 2090.0018
LEU 2100.0017
SER 2110.0025
LEU 2120.0022
ASN 2130.0022
PRO 2140.0033
MET 2150.0040
ASN 2160.0053
PHE 2170.0061
ILE 2180.0053
GLN 2190.0061
PRO 2200.0061
GLY 2210.0059
ALA 2220.0054
PHE 2230.0047
LYS 2240.0048
GLU 2250.0050
ILE 2260.0049
ARG 2270.0034
LEU 2280.0035
HIS 2290.0040
LYS 2300.0038
LEU 2310.0033
THR 2320.0033
LEU 2330.0032
ARG 2340.0037
ASN 2350.0037
ASN 2360.0033
PHE 2370.0044
ASP 2380.0042
SER 2390.0039
LEU 2400.0037
ASN 2410.0039
VAL 2420.0048
MET 2430.0048
LYS 2440.0049
THR 2450.0050
CYS 2460.0049
ILE 2470.0050
GLN 2480.0053
GLY 2490.0052
LEU 2500.0049
ALA 2510.0051
GLY 2520.0050
LEU 2530.0046
GLU 2540.0044
VAL 2550.0043
HIS 2560.0045
ARG 2570.0042
LEU 2580.0037
VAL 2590.0042
LEU 2600.0039
GLY 2610.0045
GLU 2620.0044
PHE 2630.0043
ARG 2640.0046
ASN 2650.0040
GLU 2660.0035
GLY 2670.0046
ASN 2680.0042
LEU 2690.0040
GLU 2700.0041
LYS 2710.0038
PHE 2720.0038
ASP 2730.0030
LYS 2740.0024
SER 2750.0030
ALA 2760.0037
LEU 2770.0044
GLU 2780.0046
GLY 2790.0051
LEU 2800.0049
CYS 2810.0050
ASN 2820.0058
LEU 2830.0054
THR 2840.0050
ILE 2850.0045
GLU 2860.0042
GLU 2870.0037
PHE 2880.0036
ARG 2890.0041
LEU 2900.0042
ALA 2910.0049
TYR 2920.0037
LEU 2930.0040
ASP 2940.0043
TYR 2950.0043
TYR 2960.0037
LEU 2970.0072
ASP 2980.0076
GLY 2990.0060
ILE 3000.0047
ILE 3010.0048
ASP 3020.0033
LEU 3030.0043
PHE 3040.0039
ASN 3050.0034
CYS 3060.0046
LEU 3070.0038
THR 3080.0032
ASN 3090.0036
VAL 3100.0036
SER 3110.0032
SER 3120.0030
PHE 3130.0029
SER 3140.0036
LEU 3150.0041
VAL 3160.0048
SER 3170.0052
VAL 3180.0059
THR 3190.0063
ILE 3200.0067
GLU 3210.0075
ARG 3220.0087
VAL 3230.0063
LYS 3240.0064
ASP 3250.0055
PHE 3260.0032
SER 3270.0028
TYR 3280.0017
ASN 3290.0002
PHE 3300.0011
GLY 3310.0021
TRP 3320.0009
GLN 3330.0015
HIS 3340.0010
LEU 3350.0007
GLU 3360.0015
LEU 3370.0031
VAL 3380.0035
ASN 3390.0045
CYS 3400.0052
LYS 3410.0061
PHE 3420.0082
GLY 3430.0106
GLN 3440.0092
PHE 3450.0066
PRO 3460.0054
THR 3470.0047
LEU 3480.0033
LYS 3490.0029
LEU 3500.0018
LYS 3510.0026
SER 3520.0030
LEU 3530.0025
LYS 3540.0024
ARG 3550.0018
LEU 3560.0021
THR 3570.0014
PHE 3580.0019
THR 3590.0015
SER 3600.0018
ASN 3610.0030
LYS 3620.0055
GLY 3630.0086
GLY 3640.0099
ASN 3650.0075
ALA 3660.0091
PHE 3670.0053
SER 3680.0048
GLU 3690.0045
VAL 3700.0039
ASP 3710.0035
LEU 3720.0047
PRO 3730.0050
SER 3740.0045
LEU 3750.0046
GLU 3760.0047
PHE 3770.0040
LEU 3780.0038
ASP 3790.0040
LEU 3800.0037
SER 3810.0040
ARG 3820.0047
ASN 3830.0036
GLY 3840.0055
LEU 3850.0050
SER 3860.0065
PHE 3870.0033
LYS 3880.0028
GLY 3890.0016
CYS 3900.0020
CYS 3910.0024
SER 3920.0038
GLN 3930.0041
SER 3940.0032
ASP 3950.0035
PHE 3960.0044
GLY 3970.0054
THR 3980.0055
ILE 3990.0052
SER 4000.0056
LEU 4010.0054
LYS 4020.0055
TYR 4030.0053
LEU 4040.0043
ASP 4050.0049
LEU 4060.0042
SER 4070.0062
PHE 4080.0069
ASN 4090.0061
GLY 4100.0067
VAL 4110.0069
ILE 4120.0044
THR 4130.0037
MET 4140.0017
SER 4150.0035
SER 4160.0037
ASN 4170.0043
PHE 4180.0042
LEU 4190.0051
GLY 4200.0059
LEU 4210.0060
GLU 4220.0068
GLN 4230.0076
LEU 4240.0067
GLU 4250.0075
HIS 4260.0070
LEU 4270.0037
ASP 4280.0042
PHE 4290.0039
GLN 4300.0064
HIS 4310.0080
SER 4320.0067
ASN 4330.0070
LEU 4340.0049
LYS 4350.0057
GLN 4360.0054
MET 4370.0038
SER 4380.0050
GLU 4390.0070
PHE 4400.0068
SER 4410.0058
VAL 4420.0041
PHE 4430.0046
LEU 4440.0063
SER 4450.0073
LEU 4460.0070
ARG 4470.0085
ASN 4480.0089
LEU 4490.0073
ILE 4500.0079
TYR 4510.0070
LEU 4520.0038
ASP 4530.0033
ILE 4540.0027
SER 4550.0048
HIS 4560.0067
THR 4570.0060
HIS 4580.0067
THR 4590.0048
ARG 4600.0048
VAL 4610.0035
ALA 4620.0048
PHE 4630.0050
ASN 4640.0049
GLY 4650.0056
ILE 4660.0043
PHE 4670.0045
ASN 4680.0054
GLY 4690.0065
LEU 4700.0063
SER 4710.0072
SER 4720.0072
LEU 4730.0061
GLU 4740.0066
VAL 4750.0060
LEU 4760.0044
LYS 4770.0027
MET 4780.0019
ALA 4790.0032
GLY 4800.0042
ASN 4810.0036
SER 4820.0025
PHE 4830.0017
GLN 4840.0028
GLU 4850.0023
ASN 4860.0023
PHE 4870.0029
LEU 4880.0032
PRO 4890.0038
ASP 4900.0048
ILE 4910.0044
PHE 4920.0041
THR 4930.0040
GLU 4940.0048
LEU 4950.0059
ARG 4960.0067
ASN 4970.0064
LEU 4980.0057
THR 4990.0067
PHE 5000.0058
LEU 5010.0042
ASP 5020.0014
LEU 5030.0008
SER 5040.0009
GLN 5050.0021
CYS 5060.0010
GLN 5070.0033
LEU 5080.0028
GLU 5090.0048
GLN 5100.0052
LEU 5110.0048
SER 5120.0061
PRO 5130.0072
THR 5140.0075
ALA 5150.0056
PHE 5160.0062
ASN 5170.0073
SER 5180.0077
LEU 5190.0076
SER 5200.0093
SER 5210.0096
LEU 5220.0083
GLN 5230.0085
VAL 5240.0063
LEU 5250.0039
ASN 5260.0026
MET 5270.0019
SER 5280.0040
HIS 5290.0058
ASN 5300.0050
ASN 5310.0065
PHE 5320.0056
PHE 5330.0070
SER 5340.0056
LEU 5350.0034
ASP 5360.0039
THR 5370.0047
PHE 5380.0068
PRO 5390.0056
TYR 5400.0057
LYS 5410.0080
CYS 5420.0100
LEU 5430.0091
ASN 5440.0114
SER 5450.0111
LEU 5460.0088
GLN 5470.0084
VAL 5480.0064
LEU 5490.0037
ASP 5500.0041
TYR 5510.0037
SER 5520.0065
LEU 5530.0077
ASN 5540.0074
HIS 5550.0079
ILE 5560.0067
MET 5570.0072
THR 5580.0054
SER 5590.0032
LYS 5600.0044
LYS 5610.0042
GLN 5620.0069
GLU 5630.0057
LEU 5640.0033
GLN 5650.0055
HIS 5660.0063
PHE 5670.0063
PRO 5680.0086
SER 5690.0103
SER 5700.0104
LEU 5710.0074
ALA 5720.0041
PHE 5730.0041
LEU 5740.0032
ASN 5750.0052
LEU 5760.0058
THR 5770.0061
GLN 5780.0063
ASN 5790.0066
ASP 5800.0064
PHE 5810.0061
ALA 5820.0082
CYS 5830.0077
THR 5840.0115
CYS 5850.0133
GLU 5860.0153
HIS 5870.0086
GLN 5880.0085
SER 5890.0103
PHE 5900.0086
LEU 5910.0061
GLN 5920.0068
TRP 5930.0068
ILE 5940.0060
LYS 5950.0068
ASP 5960.0077
GLN 5970.0060
ARG 5980.0061
GLN 5990.0059
LEU 6000.0054
LEU 6010.0055
VAL 6020.0051
GLU 6030.0042
VAL 6040.0031
GLU 6050.0025
ARG 6060.0036
MET 6070.0030
GLU 6080.0018
CYS 6090.0051
ALA 6100.0068
THR 6110.0105
PRO 6120.0178
SER 6130.0193
ASP 6140.0206
LYS 6150.0138
GLN 6160.0119
GLY 6170.0090
MET 6180.0071
PRO 6190.0037
VAL 6200.0027
LEU 6210.0035
SER 6220.0029
LEU 6230.0033
ASN 6240.0046
ILE 6250.0069
THR 6260.0088
CYS 6270.0122
GLU 10.0181
ALA 20.0224
ALA 30.0234
ALA 40.0171
LYS 50.0089
MET 60.0056
GLN 70.0089
ARG 80.0161
LEU 90.0150
VAL 100.0094
LEU 110.0082
LEU 120.0032
LEU 130.0055
ALA 140.0045
ILE 150.0082
SER 160.0164
LEU 170.0058
LEU 180.0116
LEU 190.0213
TYR 200.0164
GLN 210.0041
ASP 220.0141
LEU 230.0166
PRO 240.0098
VAL 250.0111
ARG 260.0090
SER 270.0065
GLU 280.0058
PHE 290.0075
GLU 300.0038
LEU 310.0030
ASP 320.0035
ARG 330.0031
ILE 340.0024
CYS 350.0026
GLY 360.0011
TYR 370.0017
GLY 380.0022
THR 390.0025
ALA 400.0031
ARG 410.0028
CYS 420.0019
ARG 430.0029
LYS 440.0056
LYS 450.0082
CYS 460.0071
ARG 470.0068
SER 480.0081
GLN 490.0062
GLU 500.0061
TYR 510.0087
ARG 520.0075
ILE 530.0087
GLY 540.0082
ARG 550.0069
CYS 560.0063
PRO 570.0096
ASN 580.0085
THR 590.0066
TYR 600.0033
ALA 610.0033
CYS 620.0036
CYS 630.0034
LEU 640.0040
ARG 650.0039
LYS 660.0062
TRP 670.0058
ASP 680.0040
GLU 690.0030
SER 700.0029
LEU 710.0038
LEU 720.0045
ASN 730.0037
ARG 740.0033
THR 750.0045
LYS 760.0056
PRO 770.0079
GLU 780.0074
ALA 790.0103
ALA 800.0119
ALA 810.0177
LYS 820.0181
LYS 830.0108
GLU 840.0119
MET 850.0064
ASN 860.0050
LEU 870.0019
SER 880.0030
VAL 890.0047
GLY 900.0079
LEU 910.0091
GLY 920.0247
GLY 930.0397
GLY 940.0376
SER 950.0219
ASN 960.0095
LEU 970.0068
SER 980.0065
VAL 990.0046
GLY 1000.0064
LEU 1010.0079
GLY 1020.0137
GLU 1030.0200
ILE 1040.0225
GLY 1050.0284
GLY 1060.0212
GLY 1070.0162
SER 1080.0111
LYS 1090.0081
LEU 1100.0079
LEU 1110.0067
ASP 1120.0163
ILE 1130.0151
ASN 1140.0250
LEU 1150.0200
GLY 1160.0334
ARG 1170.0249
GLY 1180.0206
GLY 1190.0169
GLY 1200.0202
SER 1210.0197
MET 1220.0122
VAL 1230.0111
ASP 1240.0091
LEU 1250.0136
THR 1260.0175
PHE 1270.0127
GLY 1280.0181
GLY 1290.0179
VAL 1300.0195
GLY 1310.0301
GLY 1320.0277
GLY 1330.0268
SER 1340.0231
THR 1350.0219
PHE 1360.0116
THR 1370.0141
PHE 1380.0138
PHE 1390.0196
PRO 1400.0229
LEU 1410.0282
VAL 1420.0228
ILE 1430.0188
GLY 1440.0219
GLY 1450.0417
GLY 1460.0214
SER 1470.0202
ASP 1480.0254
ALA 1490.0219
MET 1500.0256
TYR 1510.0168
LEU 1520.0144
GLY 1530.0156
PHE 1540.0151
ALA 1550.0185
ALA 1560.0215
GLY 1570.0201
GLY 1580.0193
GLY 1590.0277
SER 1600.0338
ALA 1610.0217
GLY 1620.0211
GLY 1630.0195
GLU 1640.0236
ASN 1650.0203
HIS 1660.0207
VAL 1670.0204
ALA 1680.0198
PHE 1690.0189
GLY 1700.0194
PRO 1710.0489
GLY 1720.0477
PRO 1730.0455
GLY 1740.0172
VAL 1750.0197
ASP 1760.0206
LEU 1770.0212
THR 1780.0211
PHE 1790.0217
GLY 1800.0216
GLY 1810.0192
VAL 1820.0160
GLN 1830.0147
PHE 1840.0183
ALA 1850.0178
MET 1860.0231
VAL 1870.0296
ASN 1880.0100
ASN 1890.0322
GLY 1900.0364
PRO 1910.0417
GLY 1920.0445
PRO 1930.0282
GLY 1940.0209
GLU 1950.0216
SER 1960.0282
PHE 1970.0204
THR 1980.0111
ALA 1990.0104
GLN 2000.0147
PRO 2010.0037
ALA 2020.0060
ASP 2030.0149
MET 2040.0153
GLN 2050.0214
ALA 2060.0106
GLY 2070.0051
ILE 2080.0132
LYS 2090.0123
GLY 2100.0306
PRO 2110.0145
GLY 2120.0224
PRO 2130.0229
GLY 2140.0266
GLY 2150.0306
SER 2160.0329
ILE 2170.0321
GLN 2180.0271
VAL 2190.0342
ILE 2200.0369
ASN 2210.0537
GLY 2220.0262
SER 2230.0429
THR 2240.0310
ILE 2250.0195
GLY 2260.0386
THR 2270.0356
GLY 2280.0217
SER 2290.0319
LYS 2300.0218
LYS 2310.0218
THR 2320.0172
ILE 2330.0193
LEU 2340.0184
ILE 2350.0198
TYR 2360.0123
SER 2370.0121
ILE 2380.0126
ILE 2390.0139
GLY 2400.0190
VAL 2410.0189
LYS 2420.0180
LYS 2430.0217
GLY 2440.0267
THR 2450.0251
LEU 2460.0236
ALA 2470.0206
TRP 2480.0152
ALA 2490.0148
ARG 2500.0164
THR 2510.0317
GLY 2520.0302
PHE 2530.0188
SER 2540.0213
PRO 2550.0159
ALA 2560.0321
LYS 2570.0268
LYS 2580.0198
LEU 2590.0169
ASN 2600.0104
ALA 2610.0038
GLY 2620.0066
VAL 2630.0106
VAL 2640.0241
ARG 2650.0175
VAL 2660.0142
PHE 2670.0126
PHE 2680.0129
LEU 2690.0113
ASN 2700.0122
GLN 2710.0102
LYS 2720.0097
LYS 2730.0100
ALA 2740.0093
LYS 2750.0076
ASP 2760.0145
VAL 2770.0123
LEU 2780.0095
ARG 2790.0162
LYS 2800.0245
THR 2810.0234
SER 2820.0286
ARG 2830.0247
PRO 2840.0279
MET 2850.0401
VAL 2860.0305
ASP 2870.0295
LEU 2880.0330
THR 2890.0308
PHE 2900.0167
GLY 2910.0452
GLY 2920.0867

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.