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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0985
GLU 270.0134
PRO 280.0132
CYS 290.0122
VAL 300.0124
GLU 310.0127
VAL 320.0119
VAL 330.0123
PRO 340.0133
ASN 350.0130
ILE 360.0117
THR 370.0110
TYR 380.0111
GLN 390.0106
CYS 400.0107
MET 410.0100
GLU 420.0103
LEU 430.0114
ASN 440.0111
PHE 450.0106
TYR 460.0101
LYS 470.0098
ILE 480.0098
PRO 490.0111
ASP 500.0117
ASN 510.0128
LEU 520.0124
PRO 530.0128
PHE 540.0122
SER 550.0121
THR 560.0111
LYS 570.0102
ASN 580.0095
LEU 590.0094
ASP 600.0090
LEU 610.0090
SER 620.0083
PHE 630.0087
ASN 640.0093
PRO 650.0091
LEU 660.0084
ARG 670.0076
HIS 680.0071
LEU 690.0069
GLY 700.0071
SER 710.0071
TYR 720.0081
SER 730.0083
PHE 740.0089
PHE 750.0096
SER 760.0107
PHE 770.0102
PRO 780.0103
GLU 790.0104
LEU 800.0093
GLN 810.0086
VAL 820.0079
LEU 830.0076
ASP 840.0073
LEU 850.0070
SER 860.0066
ARG 870.0070
CYS 880.0075
GLU 890.0072
ILE 900.0064
GLN 910.0058
THR 920.0053
ILE 930.0053
GLU 940.0053
ASP 950.0052
GLY 960.0062
ALA 970.0065
TYR 980.0069
GLN 990.0073
SER 1000.0086
LEU 1010.0082
SER 1020.0083
HIS 1030.0086
LEU 1040.0076
SER 1050.0069
THR 1060.0062
LEU 1070.0058
ILE 1080.0055
LEU 1090.0051
THR 1100.0049
GLY 1110.0053
ASN 1120.0055
PRO 1130.0053
ILE 1140.0046
GLN 1150.0044
SER 1160.0039
LEU 1170.0034
ALA 1180.0033
LEU 1190.0032
GLY 1200.0045
ALA 1210.0046
PHE 1220.0049
SER 1230.0056
GLY 1240.0067
LEU 1250.0064
SER 1260.0070
SER 1270.0071
LEU 1280.0060
GLN 1290.0055
LYS 1300.0047
LEU 1310.0042
VAL 1320.0038
ALA 1330.0033
VAL 1340.0033
GLU 1350.0037
THR 1360.0036
ASN 1370.0035
LEU 1380.0024
ALA 1390.0021
SER 1400.0010
LEU 1410.0008
GLU 1420.0007
ASN 1430.0011
PHE 1440.0019
PRO 1450.0027
ILE 1460.0032
GLY 1470.0035
HIS 1480.0046
LEU 1490.0048
LYS 1500.0053
THR 1510.0057
LEU 1520.0046
LYS 1530.0044
GLU 1540.0036
LEU 1550.0029
ASN 1560.0026
VAL 1570.0019
ALA 1580.0019
HIS 1590.0025
ASN 1600.0024
LEU 1610.0024
ILE 1620.0014
GLN 1630.0019
SER 1640.0016
PHE 1650.0014
LYS 1660.0018
LEU 1670.0018
PRO 1680.0019
GLU 1690.0028
TYR 1700.0030
PHE 1710.0030
SER 1720.0041
ASN 1730.0044
LEU 1740.0041
THR 1750.0049
ASN 1760.0050
LEU 1770.0038
GLU 1780.0036
HIS 1790.0028
LEU 1800.0020
ASP 1810.0015
LEU 1820.0008
SER 1830.0011
SER 1840.0019
ASN 1850.0018
LYS 1860.0023
ILE 1870.0018
GLN 1880.0026
SER 1890.0027
ILE 1900.0026
TYR 1910.0032
CYS 1920.0037
THR 1930.0035
ASP 1940.0026
LEU 1950.0029
ARG 1960.0035
VAL 1970.0034
LEU 1980.0035
HIS 1990.0043
GLN 2000.0047
MET 2010.0045
PRO 2020.0050
LEU 2030.0051
LEU 2040.0043
ASN 2050.0040
LEU 2060.0031
SER 2070.0023
LEU 2080.0015
ASP 2090.0009
LEU 2100.0006
SER 2110.0009
LEU 2120.0016
ASN 2130.0017
PRO 2140.0025
MET 2150.0024
ASN 2160.0032
PHE 2170.0033
ILE 2180.0030
GLN 2190.0037
PRO 2200.0042
GLY 2210.0044
ALA 2220.0035
PHE 2230.0034
LYS 2240.0043
GLU 2250.0045
ILE 2260.0037
ARG 2270.0036
LEU 2280.0029
HIS 2290.0030
LYS 2300.0022
LEU 2310.0016
THR 2320.0009
LEU 2330.0009
ARG 2340.0009
ASN 2350.0016
ASN 2360.0018
PHE 2370.0024
ASP 2380.0030
SER 2390.0032
LEU 2400.0031
ASN 2410.0037
VAL 2420.0033
MET 2430.0027
LYS 2440.0032
THR 2450.0035
CYS 2460.0029
ILE 2470.0028
GLN 2480.0036
GLY 2490.0033
LEU 2500.0030
ALA 2510.0037
GLY 2520.0039
LEU 2530.0033
GLU 2540.0034
VAL 2550.0028
HIS 2560.0030
ARG 2570.0022
LEU 2580.0017
VAL 2590.0011
LEU 2600.0010
GLY 2610.0009
GLU 2620.0012
PHE 2630.0016
ARG 2640.0021
ASN 2650.0028
GLU 2660.0027
GLY 2670.0027
ASN 2680.0024
LEU 2690.0026
GLU 2700.0032
LYS 2710.0031
PHE 2720.0025
ASP 2730.0028
LYS 2740.0030
SER 2750.0033
ALA 2760.0027
LEU 2770.0026
GLU 2780.0033
GLY 2790.0032
LEU 2800.0029
CYS 2810.0035
ASN 2820.0037
LEU 2830.0033
THR 2840.0034
ILE 2850.0029
GLU 2860.0030
GLU 2870.0023
PHE 2880.0019
ARG 2890.0013
LEU 2900.0010
ALA 2910.0006
TYR 2920.0006
LEU 2930.0012
ASP 2940.0017
TYR 2950.0021
TYR 2960.0019
LEU 2970.0014
ASP 2980.0016
GLY 2990.0018
ILE 3000.0019
ILE 3010.0023
ASP 3020.0027
LEU 3030.0022
PHE 3040.0022
ASN 3050.0028
CYS 3060.0028
LEU 3070.0024
THR 3080.0027
ASN 3090.0029
VAL 3100.0026
SER 3110.0027
SER 3120.0022
PHE 3130.0019
SER 3140.0015
LEU 3150.0011
VAL 3160.0008
SER 3170.0003
VAL 3180.0007
THR 3190.0006
ILE 3200.0011
GLU 3210.0011
ARG 3220.0015
VAL 3230.0016
LYS 3240.0020
ASP 3250.0020
PHE 3260.0020
SER 3270.0020
TYR 3280.0022
ASN 3290.0024
PHE 3300.0023
GLY 3310.0025
TRP 3320.0023
GLN 3330.0024
HIS 3340.0022
LEU 3350.0019
GLU 3360.0016
LEU 3370.0015
VAL 3380.0012
ASN 3390.0009
CYS 3400.0009
LYS 3410.0008
PHE 3420.0013
GLY 3430.0014
GLN 3440.0017
PHE 3450.0018
PRO 3460.0018
THR 3470.0018
LEU 3480.0019
LYS 3490.0020
LEU 3500.0021
LYS 3510.0022
SER 3520.0022
LEU 3530.0021
LYS 3540.0022
ARG 3550.0020
LEU 3560.0019
THR 3570.0018
PHE 3580.0018
THR 3590.0017
SER 3600.0016
ASN 3610.0016
LYS 3620.0014
GLY 3630.0016
GLY 3640.0020
ASN 3650.0021
ALA 3660.0025
PHE 3670.0021
SER 3680.0020
GLU 3690.0020
VAL 3700.0020
ASP 3710.0019
LEU 3720.0018
PRO 3730.0017
SER 3740.0017
LEU 3750.0018
GLU 3760.0018
PHE 3770.0018
LEU 3780.0018
ASP 3790.0019
LEU 3800.0019
SER 3810.0020
ARG 3820.0022
ASN 3830.0023
GLY 3840.0024
LEU 3850.0024
SER 3860.0025
PHE 3870.0024
LYS 3880.0024
GLY 3890.0021
CYS 3900.0018
CYS 3910.0016
SER 3920.0015
GLN 3930.0015
SER 3940.0016
ASP 3950.0017
PHE 3960.0017
GLY 3970.0016
THR 3980.0014
ILE 3990.0013
SER 4000.0013
LEU 4010.0015
LYS 4020.0015
TYR 4030.0016
LEU 4040.0017
ASP 4050.0019
LEU 4060.0020
SER 4070.0023
PHE 4080.0027
ASN 4090.0027
GLY 4100.0030
VAL 4110.0029
ILE 4120.0025
THR 4130.0024
MET 4140.0019
SER 4150.0019
SER 4160.0016
ASN 4170.0013
PHE 4180.0013
LEU 4190.0015
GLY 4200.0015
LEU 4210.0014
GLU 4220.0015
GLN 4230.0016
LEU 4240.0015
GLU 4250.0019
HIS 4260.0019
LEU 4270.0018
ASP 4280.0022
PHE 4290.0024
GLN 4300.0029
HIS 4310.0033
SER 4320.0031
ASN 4330.0033
LEU 4340.0027
LYS 4350.0027
GLN 4360.0022
MET 4370.0019
SER 4380.0019
GLU 4390.0017
PHE 4400.0013
SER 4410.0013
VAL 4420.0013
PHE 4430.0014
LEU 4440.0016
SER 4450.0017
LEU 4460.0018
ARG 4470.0024
ASN 4480.0024
LEU 4490.0022
ILE 4500.0028
TYR 4510.0027
LEU 4520.0024
ASP 4530.0028
ILE 4540.0028
SER 4550.0036
HIS 4560.0040
THR 4570.0035
HIS 4580.0040
THR 4590.0033
ARG 4600.0036
VAL 4610.0030
ALA 4620.0026
PHE 4630.0019
ASN 4640.0023
GLY 4650.0019
ILE 4660.0018
PHE 4670.0022
ASN 4680.0023
GLY 4690.0024
LEU 4700.0027
SER 4710.0036
SER 4720.0036
LEU 4730.0033
GLU 4740.0040
VAL 4750.0039
LEU 4760.0036
LYS 4770.0038
MET 4780.0038
ALA 4790.0048
GLY 4800.0051
ASN 4810.0044
SER 4820.0048
PHE 4830.0042
GLN 4840.0040
GLU 4850.0049
ASN 4860.0054
PHE 4870.0050
LEU 4880.0049
PRO 4890.0041
ASP 4900.0042
ILE 4910.0034
PHE 4920.0041
THR 4930.0046
GLU 4940.0042
LEU 4950.0043
ARG 4960.0054
ASN 4970.0051
LEU 4980.0049
THR 4990.0057
PHE 5000.0054
LEU 5010.0052
ASP 5020.0052
LEU 5030.0053
SER 5040.0062
GLN 5050.0065
CYS 5060.0057
GLN 5070.0067
LEU 5080.0064
GLU 5090.0071
GLN 5100.0066
LEU 5110.0063
SER 5120.0058
PRO 5130.0070
THR 5140.0064
ALA 5150.0056
PHE 5160.0063
ASN 5170.0069
SER 5180.0064
LEU 5190.0064
SER 5200.0075
SER 5210.0071
LEU 5220.0067
GLN 5230.0075
VAL 5240.0072
LEU 5250.0069
ASN 5260.0070
MET 5270.0073
SER 5280.0080
HIS 5290.0083
ASN 5300.0078
ASN 5310.0084
PHE 5320.0089
PHE 5330.0101
SER 5340.0104
LEU 5350.0104
ASP 5360.0099
THR 5370.0101
PHE 5380.0095
PRO 5390.0082
TYR 5400.0088
LYS 5410.0097
CYS 5420.0090
LEU 5430.0086
ASN 5440.0095
SER 5450.0088
LEU 5460.0088
GLN 5470.0094
VAL 5480.0090
LEU 5490.0089
ASP 5500.0089
TYR 5510.0093
SER 5520.0101
LEU 5530.0103
ASN 5540.0099
HIS 5550.0108
ILE 5560.0112
MET 5570.0126
THR 5580.0125
SER 5590.0120
LYS 5600.0115
LYS 5610.0111
GLN 5620.0125
GLU 5630.0117
LEU 5640.0123
GLN 5650.0128
HIS 5660.0116
PHE 5670.0111
PRO 5680.0109
SER 5690.0119
SER 5700.0109
LEU 5710.0108
ALA 5720.0113
PHE 5730.0109
LEU 5740.0109
ASN 5750.0109
LEU 5760.0115
THR 5770.0122
GLN 5780.0123
ASN 5790.0121
ASP 5800.0130
PHE 5810.0138
ALA 5820.0148
CYS 5830.0162
THR 5840.0168
CYS 5850.0174
GLU 5860.0160
HIS 5870.0151
GLN 5880.0164
SER 5890.0155
PHE 5900.0143
LEU 5910.0154
GLN 5920.0163
TRP 5930.0150
ILE 5940.0147
LYS 5950.0161
ASP 5960.0160
GLN 5970.0147
ARG 5980.0148
GLN 5990.0143
LEU 6000.0128
LEU 6010.0129
VAL 6020.0125
GLU 6030.0134
VAL 6040.0146
GLU 6050.0154
ARG 6060.0142
MET 6070.0142
GLU 6080.0153
CYS 6090.0157
ALA 6100.0151
THR 6110.0155
PRO 6120.0171
SER 6130.0178
ASP 6140.0191
LYS 6150.0182
GLN 6160.0171
GLY 6170.0169
MET 6180.0175
PRO 6190.0166
VAL 6200.0161
LEU 6210.0167
SER 6220.0182
LEU 6230.0183
ASN 6240.0195
ILE 6250.0189
THR 6260.0202
CYS 6270.0203
GLU 10.0069
ALA 20.0067
ALA 30.0056
ALA 40.0051
LYS 50.0054
MET 60.0049
GLN 70.0038
ARG 80.0038
LEU 90.0039
VAL 100.0031
LEU 110.0023
LEU 120.0027
LEU 130.0025
ALA 140.0017
ILE 150.0014
SER 160.0017
LEU 170.0016
LEU 180.0010
LEU 190.0010
TYR 200.0015
GLN 210.0015
ASP 220.0010
LEU 230.0013
PRO 240.0017
VAL 250.0023
ARG 260.0039
SER 270.0035
GLU 280.0038
PHE 290.0038
GLU 300.0033
LEU 310.0031
ASP 320.0033
ARG 330.0030
ILE 340.0025
CYS 350.0025
GLY 360.0020
TYR 370.0019
GLY 380.0019
THR 390.0021
ALA 400.0023
ARG 410.0029
CYS 420.0036
ARG 430.0042
LYS 440.0049
LYS 450.0050
CYS 460.0046
ARG 470.0044
SER 480.0046
GLN 490.0039
GLU 500.0039
TYR 510.0041
ARG 520.0042
ILE 530.0037
GLY 540.0038
ARG 550.0040
CYS 560.0038
PRO 570.0040
ASN 580.0045
THR 590.0047
TYR 600.0045
ALA 610.0043
CYS 620.0036
CYS 630.0035
LEU 640.0031
ARG 650.0030
LYS 660.0036
TRP 670.0031
ASP 680.0028
GLU 690.0031
SER 700.0025
LEU 710.0023
LEU 720.0032
ASN 730.0031
ARG 740.0025
THR 750.0031
LYS 760.0045
PRO 770.0050
GLU 780.0049
ALA 790.0063
ALA 800.0066
ALA 810.0084
LYS 820.0080
LYS 830.0079
GLU 840.0083
MET 850.0078
ASN 860.0088
LEU 870.0087
SER 880.0094
VAL 890.0094
GLY 900.0100
LEU 910.0106
GLY 920.0110
GLY 930.0120
GLY 940.0120
SER 950.0117
ASN 960.0108
LEU 970.0103
SER 980.0098
VAL 990.0091
GLY 1000.0088
LEU 1010.0081
GLY 1020.0081
GLU 1030.0077
ILE 1040.0076
GLY 1050.0073
GLY 1060.0069
GLY 1070.0073
SER 1080.0074
LYS 1090.0080
LEU 1100.0083
LEU 1110.0083
ASP 1120.0087
ILE 1130.0092
ASN 1140.0097
LEU 1150.0098
GLY 1160.0111
ARG 1170.0109
GLY 1180.0111
GLY 1190.0099
GLY 1200.0094
SER 1210.0099
MET 1220.0096
VAL 1230.0091
ASP 1240.0089
LEU 1250.0084
THR 1260.0082
PHE 1270.0074
GLY 1280.0073
GLY 1290.0069
VAL 1300.0062
GLY 1310.0056
GLY 1320.0051
GLY 1330.0053
SER 1340.0055
THR 1350.0060
PHE 1360.0067
THR 1370.0070
PHE 1380.0074
PHE 1390.0079
PRO 1400.0084
LEU 1410.0086
VAL 1420.0098
ILE 1430.0089
GLY 1440.0098
GLY 1450.0098
GLY 1460.0086
SER 1470.0086
ASP 1480.0087
ALA 1490.0083
MET 1500.0079
TYR 1510.0069
LEU 1520.0069
GLY 1530.0067
PHE 1540.0070
ALA 1550.0069
ALA 1560.0054
GLY 1570.0051
GLY 1580.0045
GLY 1590.0050
SER 1600.0053
ALA 1610.0062
GLY 1620.0067
GLY 1630.0074
GLU 1640.0077
ASN 1650.0079
HIS 1660.0083
VAL 1670.0085
ALA 1680.0092
PHE 1690.0095
GLY 1700.0101
PRO 1710.0099
GLY 1720.0110
PRO 1730.0117
GLY 1740.0112
VAL 1750.0101
ASP 1760.0101
LEU 1770.0093
THR 1780.0090
PHE 1790.0083
GLY 1800.0082
GLY 1810.0095
VAL 1820.0099
GLN 1830.0105
PHE 1840.0107
ALA 1850.0117
MET 1860.0123
VAL 1870.0161
ASN 1880.0175
ASN 1890.0207
GLY 1900.0224
PRO 1910.0410
GLY 1920.0698
PRO 1930.0921
GLY 1940.0985
GLU 1950.0714
SER 1960.0619
PHE 1970.0392
THR 1980.0255
ALA 1990.0269
GLN 2000.0318
PRO 2010.0538
ALA 2020.0613
ASP 2030.0443
MET 2040.0480
GLN 2050.0678
ALA 2060.0546
GLY 2070.0419
ILE 2080.0259
LYS 2090.0281
GLY 2100.0372
PRO 2110.0572
GLY 2120.0824
PRO 2130.0949
GLY 2140.0898
GLY 2150.0656
SER 2160.0503
ILE 2170.0390
GLN 2180.0331
VAL 2190.0215
ILE 2200.0179
ASN 2210.0163
GLY 2220.0159
SER 2230.0174
THR 2240.0180
ILE 2250.0190
GLY 2260.0228
THR 2270.0250
GLY 2280.0257
SER 2290.0255
LYS 2300.0219
LYS 2310.0182
THR 2320.0156
ILE 2330.0131
LEU 2340.0105
ILE 2350.0080
TYR 2360.0060
SER 2370.0052
ILE 2380.0041
ILE 2390.0043
GLY 2400.0036
VAL 2410.0034
LYS 2420.0034
LYS 2430.0035
GLY 2440.0042
THR 2450.0045
LEU 2460.0049
ALA 2470.0061
TRP 2480.0069
ALA 2490.0079
ARG 2500.0091
THR 2510.0095
GLY 2520.0120
PHE 2530.0126
SER 2540.0149
PRO 2550.0171
ALA 2560.0188
LYS 2570.0220
LYS 2580.0221
LEU 2590.0222
ASN 2600.0236
ALA 2610.0206
GLY 2620.0178
VAL 2630.0159
VAL 2640.0120
ARG 2650.0105
VAL 2660.0075
PHE 2670.0059
PHE 2680.0050
LEU 2690.0043
ASN 2700.0040
GLN 2710.0035
LYS 2720.0031
LYS 2730.0037
ALA 2740.0039
LYS 2750.0034
ASP 2760.0040
VAL 2770.0042
LEU 2780.0052
ARG 2790.0053
LYS 2800.0048
THR 2810.0048
SER 2820.0052
ARG 2830.0057
PRO 2840.0064
MET 2850.0066
VAL 2860.0077
ASP 2870.0097
LEU 2880.0107
THR 2890.0128
PHE 2900.0154
GLY 2910.0184
GLY 2920.0198

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.