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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0825
GLU 270.0287
PRO 280.0282
CYS 290.0260
VAL 300.0263
GLU 310.0268
VAL 320.0248
VAL 330.0253
PRO 340.0276
ASN 350.0270
ILE 360.0242
THR 370.0228
TYR 380.0234
GLN 390.0226
CYS 400.0228
MET 410.0215
GLU 420.0224
LEU 430.0245
ASN 440.0237
PHE 450.0227
TYR 460.0216
LYS 470.0211
ILE 480.0212
PRO 490.0238
ASP 500.0253
ASN 510.0276
LEU 520.0264
PRO 530.0271
PHE 540.0260
SER 550.0253
THR 560.0233
LYS 570.0211
ASN 580.0197
LEU 590.0198
ASP 600.0191
LEU 610.0192
SER 620.0179
PHE 630.0189
ASN 640.0200
PRO 650.0194
LEU 660.0181
ARG 670.0161
HIS 680.0152
LEU 690.0152
GLY 700.0156
SER 710.0160
TYR 720.0181
SER 730.0183
PHE 740.0194
PHE 750.0212
SER 760.0232
PHE 770.0220
PRO 780.0220
GLU 790.0219
LEU 800.0195
GLN 810.0175
VAL 820.0162
LEU 830.0160
ASP 840.0154
LEU 850.0151
SER 860.0144
ARG 870.0154
CYS 880.0163
GLU 890.0155
ILE 900.0138
GLN 910.0122
THR 920.0115
ILE 930.0117
GLU 940.0121
ASP 950.0121
GLY 960.0142
ALA 970.0146
TYR 980.0153
GLN 990.0163
SER 1000.0188
LEU 1010.0177
SER 1020.0176
HIS 1030.0178
LEU 1040.0157
SER 1050.0138
THR 1060.0126
LEU 1070.0121
ILE 1080.0117
LEU 1090.0111
THR 1100.0109
GLY 1110.0119
ASN 1120.0121
PRO 1130.0115
ILE 1140.0098
GLN 1150.0090
SER 1160.0083
LEU 1170.0078
ALA 1180.0080
LEU 1190.0081
GLY 1200.0107
ALA 1210.0105
PHE 1220.0109
SER 1230.0126
GLY 1240.0149
LEU 1250.0137
SER 1260.0147
SER 1270.0144
LEU 1280.0121
GLN 1290.0106
LYS 1300.0093
LEU 1310.0085
VAL 1320.0081
ALA 1330.0074
VAL 1340.0076
GLU 1350.0085
THR 1360.0082
ASN 1370.0079
LEU 1380.0057
ALA 1390.0050
SER 1400.0031
LEU 1410.0025
GLU 1420.0026
ASN 1430.0034
PHE 1440.0047
PRO 1450.0064
ILE 1460.0071
GLY 1470.0077
HIS 1480.0099
LEU 1490.0100
LYS 1500.0107
THR 1510.0112
LEU 1520.0088
LYS 1530.0080
GLU 1540.0066
LEU 1550.0055
ASN 1560.0055
VAL 1570.0045
ALA 1580.0051
HIS 1590.0067
ASN 1600.0062
LEU 1610.0062
ILE 1620.0043
GLN 1630.0051
SER 1640.0043
PHE 1650.0037
LYS 1660.0040
LEU 1670.0037
PRO 1680.0042
GLU 1690.0060
TYR 1700.0063
PHE 1710.0060
SER 1720.0081
ASN 1730.0089
LEU 1740.0079
THR 1750.0092
ASN 1760.0091
LEU 1770.0066
GLU 1780.0058
HIS 1790.0045
LEU 1800.0034
ASP 1810.0035
LEU 1820.0031
SER 1830.0043
SER 1840.0059
ASN 1850.0055
LYS 1860.0063
ILE 1870.0053
GLN 1880.0068
SER 1890.0067
ILE 1900.0060
TYR 1910.0070
CYS 1920.0077
THR 1930.0072
ASP 1940.0054
LEU 1950.0058
ARG 1960.0070
VAL 1970.0066
LEU 1980.0066
HIS 1990.0082
GLN 2000.0090
MET 2010.0084
PRO 2020.0091
LEU 2030.0091
LEU 2040.0074
ASN 2050.0065
LEU 2060.0048
SER 2070.0033
LEU 2080.0025
ASP 2090.0026
LEU 2100.0034
SER 2110.0044
LEU 2120.0058
ASN 2130.0057
PRO 2140.0072
MET 2150.0069
ASN 2160.0083
PHE 2170.0080
ILE 2180.0072
GLN 2190.0082
PRO 2200.0091
GLY 2210.0090
ALA 2220.0073
PHE 2230.0068
LYS 2240.0084
GLU 2250.0084
ILE 2260.0067
ARG 2270.0061
LEU 2280.0046
HIS 2290.0043
LYS 2300.0030
LEU 2310.0029
THR 2320.0028
LEU 2330.0040
ARG 2340.0047
ASN 2350.0062
ASN 2360.0062
PHE 2370.0073
ASP 2380.0087
SER 2390.0092
LEU 2400.0089
ASN 2410.0097
VAL 2420.0088
MET 2430.0076
LYS 2440.0083
THR 2450.0087
CYS 2460.0072
ILE 2470.0069
GLN 2480.0082
GLY 2490.0074
LEU 2500.0065
ALA 2510.0077
GLY 2520.0077
LEU 2530.0062
GLU 2540.0060
VAL 2550.0046
HIS 2560.0044
ARG 2570.0031
LEU 2580.0033
VAL 2590.0031
LEU 2600.0042
GLY 2610.0051
GLU 2620.0058
PHE 2630.0064
ARG 2640.0074
ASN 2650.0085
GLU 2660.0085
GLY 2670.0086
ASN 2680.0081
LEU 2690.0083
GLU 2700.0097
LYS 2710.0094
PHE 2720.0079
ASP 2730.0085
LYS 2740.0082
SER 2750.0085
ALA 2760.0075
LEU 2770.0068
GLU 2780.0079
GLY 2790.0074
LEU 2800.0064
CYS 2810.0074
ASN 2820.0077
LEU 2830.0065
THR 2840.0062
ILE 2850.0050
GLU 2860.0046
GLU 2870.0035
PHE 2880.0035
ARG 2890.0032
LEU 2900.0040
ALA 2910.0039
TYR 2920.0050
LEU 2930.0059
ASP 2940.0068
TYR 2950.0072
TYR 2960.0067
LEU 2970.0063
ASP 2980.0068
GLY 2990.0063
ILE 3000.0058
ILE 3010.0065
ASP 3020.0072
LEU 3030.0065
PHE 3040.0057
ASN 3050.0064
CYS 3060.0063
LEU 3070.0052
THR 3080.0056
ASN 3090.0054
VAL 3100.0046
SER 3110.0041
SER 3120.0033
PHE 3130.0034
SER 3140.0031
LEU 3150.0036
VAL 3160.0036
SER 3170.0040
VAL 3180.0045
THR 3190.0050
ILE 3200.0051
GLU 3210.0055
ARG 3220.0054
VAL 3230.0047
LYS 3240.0050
ASP 3250.0052
PHE 3260.0045
SER 3270.0048
TYR 3280.0053
ASN 3290.0051
PHE 3300.0049
GLY 3310.0048
TRP 3320.0040
GLN 3330.0036
HIS 3340.0030
LEU 3350.0031
GLU 3360.0029
LEU 3370.0032
VAL 3380.0030
ASN 3390.0033
CYS 3400.0037
LYS 3410.0040
PHE 3420.0040
GLY 3430.0043
GLN 3440.0039
PHE 3450.0034
PRO 3460.0037
THR 3470.0038
LEU 3480.0037
LYS 3490.0039
LEU 3500.0039
LYS 3510.0041
SER 3520.0040
LEU 3530.0034
LYS 3540.0031
ARG 3550.0027
LEU 3560.0028
THR 3570.0028
PHE 3580.0028
THR 3590.0026
SER 3600.0027
ASN 3610.0030
LYS 3620.0033
GLY 3630.0035
GLY 3640.0034
ASN 3650.0028
ALA 3660.0026
PHE 3670.0026
SER 3680.0027
GLU 3690.0028
VAL 3700.0030
ASP 3710.0031
LEU 3720.0032
PRO 3730.0032
SER 3740.0032
LEU 3750.0030
GLU 3760.0028
PHE 3770.0027
LEU 3780.0027
ASP 3790.0026
LEU 3800.0026
SER 3810.0025
ARG 3820.0023
ASN 3830.0024
GLY 3840.0022
LEU 3850.0023
SER 3860.0021
PHE 3870.0021
LYS 3880.0020
GLY 3890.0021
CYS 3900.0022
CYS 3910.0024
SER 3920.0027
GLN 3930.0028
SER 3940.0026
ASP 3950.0025
PHE 3960.0027
GLY 3970.0027
THR 3980.0028
ILE 3990.0029
SER 4000.0030
LEU 4010.0029
LYS 4020.0030
TYR 4030.0029
LEU 4040.0027
ASP 4050.0026
LEU 4060.0025
SER 4070.0025
PHE 4080.0023
ASN 4090.0021
GLY 4100.0018
VAL 4110.0017
ILE 4120.0018
THR 4130.0018
MET 4140.0019
SER 4150.0020
SER 4160.0023
ASN 4170.0025
PHE 4180.0027
LEU 4190.0028
GLY 4200.0030
LEU 4210.0031
GLU 4220.0032
GLN 4230.0034
LEU 4240.0032
GLU 4250.0033
HIS 4260.0032
LEU 4270.0030
ASP 4280.0028
PHE 4290.0025
GLN 4300.0025
HIS 4310.0023
SER 4320.0019
ASN 4330.0017
LEU 4340.0018
LYS 4350.0016
GLN 4360.0016
MET 4370.0018
SER 4380.0017
GLU 4390.0017
PHE 4400.0020
SER 4410.0023
VAL 4420.0023
PHE 4430.0027
LEU 4440.0029
SER 4450.0032
LEU 4460.0033
ARG 4470.0037
ASN 4480.0039
LEU 4490.0036
ILE 4500.0038
TYR 4510.0036
LEU 4520.0032
ASP 4530.0030
ILE 4540.0026
SER 4550.0027
HIS 4560.0025
THR 4570.0022
HIS 4580.0021
THR 4590.0020
ARG 4600.0020
VAL 4610.0020
ALA 4620.0016
PHE 4630.0017
ASN 4640.0021
GLY 4650.0023
ILE 4660.0022
PHE 4670.0028
ASN 4680.0030
GLY 4690.0034
LEU 4700.0036
SER 4710.0042
SER 4720.0044
LEU 4730.0041
GLU 4740.0044
VAL 4750.0041
LEU 4760.0036
LYS 4770.0034
MET 4780.0030
ALA 4790.0033
GLY 4800.0031
ASN 4810.0026
SER 4820.0027
PHE 4830.0025
GLN 4840.0023
GLU 4850.0029
ASN 4860.0032
PHE 4870.0030
LEU 4880.0031
PRO 4890.0027
ASP 4900.0030
ILE 4910.0028
PHE 4920.0035
THR 4930.0038
GLU 4940.0040
LEU 4950.0042
ARG 4960.0049
ASN 4970.0051
LEU 4980.0048
THR 4990.0053
PHE 5000.0049
LEU 5010.0044
ASP 5020.0042
LEU 5030.0038
SER 5040.0042
GLN 5050.0041
CYS 5060.0035
GLN 5070.0040
LEU 5080.0039
GLU 5090.0042
GLN 5100.0039
LEU 5110.0038
SER 5120.0035
PRO 5130.0041
THR 5140.0040
ALA 5150.0038
PHE 5160.0045
ASN 5170.0048
SER 5180.0049
LEU 5190.0052
SER 5200.0060
SER 5210.0061
LEU 5220.0057
GLN 5230.0063
VAL 5240.0059
LEU 5250.0053
ASN 5260.0051
MET 5270.0050
SER 5280.0054
HIS 5290.0053
ASN 5300.0049
ASN 5310.0052
PHE 5320.0055
PHE 5330.0062
SER 5340.0063
LEU 5350.0065
ASP 5360.0060
THR 5370.0063
PHE 5380.0058
PRO 5390.0052
TYR 5400.0059
LYS 5410.0064
CYS 5420.0062
LEU 5430.0063
ASN 5440.0071
SER 5450.0071
LEU 5460.0068
GLN 5470.0074
VAL 5480.0070
LEU 5490.0065
ASP 5500.0063
TYR 5510.0063
SER 5520.0067
LEU 5530.0066
ASN 5540.0062
HIS 5550.0067
ILE 5560.0070
MET 5570.0078
THR 5580.0076
SER 5590.0072
LYS 5600.0067
LYS 5610.0063
GLN 5620.0072
GLU 5630.0069
LEU 5640.0076
GLN 5650.0080
HIS 5660.0074
PHE 5670.0074
PRO 5680.0076
SER 5690.0085
SER 5700.0082
LEU 5710.0080
ALA 5720.0086
PHE 5730.0081
LEU 5740.0077
ASN 5750.0076
LEU 5760.0077
THR 5770.0081
GLN 5780.0079
ASN 5790.0077
ASP 5800.0081
PHE 5810.0087
ALA 5820.0092
CYS 5830.0101
THR 5840.0104
CYS 5850.0106
GLU 5860.0096
HIS 5870.0092
GLN 5880.0100
SER 5890.0094
PHE 5900.0088
LEU 5910.0097
GLN 5920.0103
TRP 5930.0095
ILE 5940.0095
LYS 5950.0106
ASP 5960.0105
GLN 5970.0099
ARG 5980.0101
GLN 5990.0102
LEU 6000.0091
LEU 6010.0090
VAL 6020.0089
GLU 6030.0093
VAL 6040.0099
GLU 6050.0103
ARG 6060.0094
MET 6070.0093
GLU 6080.0098
CYS 6090.0099
ALA 6100.0095
THR 6110.0096
PRO 6120.0107
SER 6130.0111
ASP 6140.0120
LYS 6150.0115
GLN 6160.0108
GLY 6170.0107
MET 6180.0112
PRO 6190.0108
VAL 6200.0104
LEU 6210.0110
SER 6220.0119
LEU 6230.0117
ASN 6240.0124
ILE 6250.0119
THR 6260.0125
CYS 6270.0124
GLU 10.0236
ALA 20.0225
ALA 30.0198
ALA 40.0180
LYS 50.0177
MET 60.0163
GLN 70.0134
ARG 80.0126
LEU 90.0122
VAL 100.0102
LEU 110.0078
LEU 120.0077
LEU 130.0073
ALA 140.0050
ILE 150.0036
SER 160.0038
LEU 170.0036
LEU 180.0018
LEU 190.0015
TYR 200.0028
GLN 210.0027
ASP 220.0018
LEU 230.0022
PRO 240.0032
VAL 250.0042
ARG 260.0056
SER 270.0050
GLU 280.0053
PHE 290.0055
GLU 300.0045
LEU 310.0036
ASP 320.0040
ARG 330.0035
ILE 340.0026
CYS 350.0028
GLY 360.0024
TYR 370.0026
GLY 380.0022
THR 390.0029
ALA 400.0026
ARG 410.0037
CYS 420.0047
ARG 430.0061
LYS 440.0078
LYS 450.0083
CYS 460.0079
ARG 470.0078
SER 480.0087
GLN 490.0075
GLU 500.0071
TYR 510.0079
ARG 520.0075
ILE 530.0068
GLY 540.0063
ARG 550.0059
CYS 560.0049
PRO 570.0049
ASN 580.0060
THR 590.0067
TYR 600.0066
ALA 610.0067
CYS 620.0054
CYS 630.0056
LEU 640.0053
ARG 650.0056
LYS 660.0074
TRP 670.0070
ASP 680.0065
GLU 690.0075
SER 700.0063
LEU 710.0062
LEU 720.0079
ASN 730.0077
ARG 740.0069
THR 750.0083
LYS 760.0103
PRO 770.0110
GLU 780.0106
ALA 790.0127
ALA 800.0135
ALA 810.0124
LYS 820.0115
LYS 830.0093
GLU 840.0086
MET 850.0068
ASN 860.0078
LEU 870.0071
SER 880.0072
VAL 890.0077
GLY 900.0074
LEU 910.0092
GLY 920.0090
GLY 930.0096
GLY 940.0090
SER 950.0101
ASN 960.0094
LEU 970.0099
SER 980.0095
VAL 990.0094
GLY 1000.0097
LEU 1010.0094
GLY 1020.0112
GLU 1030.0115
ILE 1040.0128
GLY 1050.0132
GLY 1060.0115
GLY 1070.0111
SER 1080.0095
LYS 1090.0097
LEU 1100.0099
LEU 1110.0097
ASP 1120.0113
ILE 1130.0112
ASN 1140.0131
LEU 1150.0127
GLY 1160.0142
ARG 1170.0152
GLY 1180.0140
GLY 1190.0132
GLY 1200.0114
SER 1210.0102
MET 1220.0084
VAL 1230.0079
ASP 1240.0061
LEU 1250.0058
THR 1260.0048
PHE 1270.0046
GLY 1280.0052
GLY 1290.0046
VAL 1300.0057
GLY 1310.0059
GLY 1320.0053
GLY 1330.0036
SER 1340.0033
THR 1350.0019
PHE 1360.0035
THR 1370.0045
PHE 1380.0059
PHE 1390.0077
PRO 1400.0091
LEU 1410.0103
VAL 1420.0115
ILE 1430.0125
GLY 1440.0141
GLY 1450.0148
GLY 1460.0158
SER 1470.0151
ASP 1480.0140
ALA 1490.0129
MET 1500.0112
TYR 1510.0106
LEU 1520.0088
GLY 1530.0082
PHE 1540.0066
ALA 1550.0058
ALA 1560.0041
GLY 1570.0023
GLY 1580.0021
GLY 1590.0018
SER 1600.0026
ALA 1610.0022
GLY 1620.0029
GLY 1630.0021
GLU 1640.0016
ASN 1650.0017
HIS 1660.0032
VAL 1670.0050
ALA 1680.0061
PHE 1690.0081
GLY 1700.0089
PRO 1710.0110
GLY 1720.0112
PRO 1730.0121
GLY 1740.0102
VAL 1750.0086
ASP 1760.0066
LEU 1770.0054
THR 1780.0036
PHE 1790.0027
GLY 1800.0025
GLY 1810.0036
VAL 1820.0051
GLN 1830.0057
PHE 1840.0070
ALA 1850.0087
MET 1860.0099
VAL 1870.0129
ASN 1880.0155
ASN 1890.0178
GLY 1900.0202
PRO 1910.0290
GLY 1920.0443
PRO 1930.0500
GLY 1940.0467
GLU 1950.0339
SER 1960.0215
PHE 1970.0169
THR 1980.0099
ALA 1990.0146
GLN 2000.0285
PRO 2010.0324
ALA 2020.0438
ASP 2030.0394
MET 2040.0329
GLN 2050.0446
ALA 2060.0401
GLY 2070.0270
ILE 2080.0274
LYS 2090.0406
GLY 2100.0445
PRO 2110.0603
GLY 2120.0801
PRO 2130.0825
GLY 2140.0690
GLY 2150.0513
SER 2160.0337
ILE 2170.0255
GLN 2180.0204
VAL 2190.0115
ILE 2200.0082
ASN 2210.0078
GLY 2220.0086
SER 2230.0102
THR 2240.0136
ILE 2250.0149
GLY 2260.0172
THR 2270.0193
GLY 2280.0189
SER 2290.0189
LYS 2300.0163
LYS 2310.0145
THR 2320.0123
ILE 2330.0124
LEU 2340.0105
ILE 2350.0106
TYR 2360.0082
SER 2370.0074
ILE 2380.0059
ILE 2390.0045
GLY 2400.0040
VAL 2410.0024
LYS 2420.0017
LYS 2430.0019
GLY 2440.0010
THR 2450.0002
LEU 2460.0022
ALA 2470.0026
TRP 2480.0046
ALA 2490.0047
ARG 2500.0067
THR 2510.0071
GLY 2520.0075
PHE 2530.0083
SER 2540.0086
PRO 2550.0100
ALA 2560.0095
LYS 2570.0104
LYS 2580.0142
LEU 2590.0150
ASN 2600.0185
ALA 2610.0234
GLY 2620.0196
VAL 2630.0179
VAL 2640.0164
ARG 2650.0125
VAL 2660.0105
PHE 2670.0086
PHE 2680.0081
LEU 2690.0065
ASN 2700.0053
GLN 2710.0031
LYS 2720.0032
LYS 2730.0050
ALA 2740.0048
LYS 2750.0039
ASP 2760.0055
VAL 2770.0066
LEU 2780.0065
ARG 2790.0069
LYS 2800.0079
THR 2810.0094
SER 2820.0104
ARG 2830.0118
PRO 2840.0138
MET 2850.0144
VAL 2860.0158
ASP 2870.0234
LEU 2880.0267
THR 2890.0346
PHE 2900.0415
GLY 2910.0513
GLY 2920.0582

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.