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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1622
GLU 270.0196
PRO 280.0202
CYS 290.0182
VAL 300.0193
GLU 310.0197
VAL 320.0187
VAL 330.0191
PRO 340.0204
ASN 350.0189
ILE 360.0168
THR 370.0158
TYR 380.0159
GLN 390.0157
CYS 400.0153
MET 410.0150
GLU 420.0163
LEU 430.0176
ASN 440.0170
PHE 450.0149
TYR 460.0140
LYS 470.0122
ILE 480.0116
PRO 490.0139
ASP 500.0141
ASN 510.0168
LEU 520.0163
PRO 530.0170
PHE 540.0153
SER 550.0159
THR 560.0146
LYS 570.0133
ASN 580.0124
LEU 590.0120
ASP 600.0119
LEU 610.0118
SER 620.0116
PHE 630.0133
ASN 640.0136
PRO 650.0135
LEU 660.0112
ARG 670.0108
HIS 680.0086
LEU 690.0065
GLY 700.0054
SER 710.0036
TYR 720.0053
SER 730.0069
PHE 740.0081
PHE 750.0087
SER 760.0113
PHE 770.0113
PRO 780.0112
GLU 790.0125
LEU 800.0106
GLN 810.0100
VAL 820.0089
LEU 830.0081
ASP 840.0084
LEU 850.0081
SER 860.0087
ARG 870.0105
CYS 880.0106
GLU 890.0112
ILE 900.0089
GLN 910.0092
THR 920.0072
ILE 930.0047
GLU 940.0035
ASP 950.0013
GLY 960.0018
ALA 970.0033
TYR 980.0042
GLN 990.0046
SER 1000.0072
LEU 1010.0075
SER 1020.0084
HIS 1030.0096
LEU 1040.0075
SER 1050.0070
THR 1060.0056
LEU 1070.0044
ILE 1080.0050
LEU 1090.0051
THR 1100.0063
GLY 1110.0083
ASN 1120.0084
PRO 1130.0096
ILE 1140.0079
GLN 1150.0092
SER 1160.0075
LEU 1170.0051
ALA 1180.0045
LEU 1190.0042
GLY 1200.0023
ALA 1210.0013
PHE 1220.0014
SER 1230.0032
GLY 1240.0051
LEU 1250.0050
SER 1260.0072
SER 1270.0076
LEU 1280.0054
GLN 1290.0052
LYS 1300.0033
LEU 1310.0015
VAL 1320.0023
ALA 1330.0031
VAL 1340.0045
GLU 1350.0066
THR 1360.0063
ASN 1370.0077
LEU 1380.0065
ALA 1390.0083
SER 1400.0076
LEU 1410.0062
GLU 1420.0076
ASN 1430.0067
PHE 1440.0046
PRO 1450.0040
ILE 1460.0035
GLY 1470.0058
HIS 1480.0059
LEU 1490.0050
LYS 1500.0069
THR 1510.0067
LEU 1520.0046
LYS 1530.0044
GLU 1540.0024
LEU 1550.0015
ASN 1560.0014
VAL 1570.0033
ALA 1580.0043
HIS 1590.0061
ASN 1600.0065
LEU 1610.0080
ILE 1620.0075
GLN 1630.0092
SER 1640.0091
PHE 1650.0081
LYS 1660.0089
LEU 1670.0078
PRO 1680.0082
GLU 1690.0093
TYR 1700.0077
PHE 1710.0070
SER 1720.0089
ASN 1730.0081
LEU 1740.0065
THR 1750.0079
ASN 1760.0069
LEU 1770.0049
GLU 1780.0043
HIS 1790.0025
LEU 1800.0028
ASP 1810.0026
LEU 1820.0044
SER 1830.0048
SER 1840.0062
ASN 1850.0068
LYS 1860.0085
ILE 1870.0085
GLN 1880.0099
SER 1890.0102
ILE 1900.0097
TYR 1910.0110
CYS 1920.0115
THR 1930.0117
ASP 1940.0100
LEU 1950.0095
ARG 1960.0107
VAL 1970.0095
LEU 1980.0088
HIS 1990.0105
GLN 2000.0110
MET 2010.0096
PRO 2020.0101
LEU 2030.0093
LEU 2040.0076
ASN 2050.0062
LEU 2060.0049
SER 2070.0033
LEU 2080.0037
ASP 2090.0034
LEU 2100.0051
SER 2110.0052
LEU 2120.0065
ASN 2130.0074
PRO 2140.0090
MET 2150.0089
ASN 2160.0104
PHE 2170.0106
ILE 2180.0099
GLN 2190.0112
PRO 2200.0112
GLY 2210.0112
ALA 2220.0102
PHE 2230.0090
LYS 2240.0102
GLU 2250.0099
ILE 2260.0084
ARG 2270.0073
LEU 2280.0056
HIS 2290.0045
LYS 2300.0034
LEU 2310.0039
THR 2320.0036
LEU 2330.0049
ARG 2340.0050
ASN 2350.0065
ASN 2360.0071
PHE 2370.0082
ASP 2380.0094
SER 2390.0094
LEU 2400.0086
ASN 2410.0096
VAL 2420.0097
MET 2430.0081
LYS 2440.0084
THR 2450.0096
CYS 2460.0087
ILE 2470.0077
GLN 2480.0091
GLY 2490.0093
LEU 2500.0079
ALA 2510.0086
GLY 2520.0087
LEU 2530.0075
GLU 2540.0067
VAL 2550.0052
HIS 2560.0044
ARG 2570.0030
LEU 2580.0034
VAL 2590.0030
LEU 2600.0041
GLY 2610.0047
GLU 2620.0056
PHE 2630.0060
ARG 2640.0068
ASN 2650.0076
GLU 2660.0078
GLY 2670.0087
ASN 2680.0079
LEU 2690.0080
GLU 2700.0090
LYS 2710.0082
PHE 2720.0068
ASP 2730.0067
LYS 2740.0060
SER 2750.0068
ALA 2760.0064
LEU 2770.0058
GLU 2780.0067
GLY 2790.0072
LEU 2800.0059
CYS 2810.0063
ASN 2820.0076
LEU 2830.0067
THR 2840.0061
ILE 2850.0047
GLU 2860.0040
GLU 2870.0025
PHE 2880.0024
ARG 2890.0021
LEU 2900.0032
ALA 2910.0034
TYR 2920.0047
LEU 2930.0053
ASP 2940.0064
TYR 2950.0064
TYR 2960.0059
LEU 2970.0053
ASP 2980.0054
GLY 2990.0044
ILE 3000.0036
ILE 3010.0036
ASP 3020.0043
LEU 3030.0044
PHE 3040.0035
ASN 3050.0037
CYS 3060.0044
LEU 3070.0034
THR 3080.0029
ASN 3090.0032
VAL 3100.0029
SER 3110.0026
SER 3120.0016
PHE 3130.0012
SER 3140.0013
LEU 3150.0024
VAL 3160.0029
SER 3170.0041
VAL 3180.0043
THR 3190.0049
ILE 3200.0045
GLU 3210.0051
ARG 3220.0045
VAL 3230.0036
LYS 3240.0032
ASP 3250.0026
PHE 3260.0019
SER 3270.0017
TYR 3280.0013
ASN 3290.0006
PHE 3300.0012
GLY 3310.0019
TRP 3320.0014
GLN 3330.0019
HIS 3340.0012
LEU 3350.0005
GLU 3360.0010
LEU 3370.0020
VAL 3380.0026
ASN 3390.0036
CYS 3400.0039
LYS 3410.0047
PHE 3420.0046
GLY 3430.0054
GLN 3440.0050
PHE 3450.0043
PRO 3460.0033
THR 3470.0031
LEU 3480.0021
LYS 3490.0018
LEU 3500.0012
LYS 3510.0020
SER 3520.0020
LEU 3530.0017
LYS 3540.0025
ARG 3550.0021
LEU 3560.0017
THR 3570.0016
PHE 3580.0023
THR 3590.0026
SER 3600.0033
ASN 3610.0038
LYS 3620.0050
GLY 3630.0053
GLY 3640.0054
ASN 3650.0052
ALA 3660.0055
PHE 3670.0051
SER 3680.0052
GLU 3690.0049
VAL 3700.0037
ASP 3710.0036
LEU 3720.0029
PRO 3730.0036
SER 3740.0034
LEU 3750.0033
GLU 3760.0039
PHE 3770.0031
LEU 3780.0028
ASP 3790.0024
LEU 3800.0029
SER 3810.0031
ARG 3820.0033
ASN 3830.0039
GLY 3840.0048
LEU 3850.0049
SER 3860.0058
PHE 3870.0062
LYS 3880.0075
GLY 3890.0079
CYS 3900.0069
CYS 3910.0068
SER 3920.0071
GLN 3930.0065
SER 3940.0066
ASP 3950.0058
PHE 3960.0046
GLY 3970.0049
THR 3980.0050
ILE 3990.0061
SER 4000.0056
LEU 4010.0050
LYS 4020.0052
TYR 4030.0042
LEU 4040.0039
ASP 4050.0031
LEU 4060.0037
SER 4070.0032
PHE 4080.0035
ASN 4090.0044
GLY 4100.0058
VAL 4110.0067
ILE 4120.0066
THR 4130.0080
MET 4140.0082
SER 4150.0093
SER 4160.0091
ASN 4170.0090
PHE 4180.0080
LEU 4190.0090
GLY 4200.0084
LEU 4210.0073
GLU 4220.0085
GLN 4230.0077
LEU 4240.0065
GLU 4250.0064
HIS 4260.0049
LEU 4270.0046
ASP 4280.0034
PHE 4290.0038
GLN 4300.0030
HIS 4310.0038
SER 4320.0048
ASN 4330.0062
LEU 4340.0067
LYS 4350.0082
GLN 4360.0094
MET 4370.0087
SER 4380.0101
GLU 4390.0113
PHE 4400.0113
SER 4410.0104
VAL 4420.0091
PHE 4430.0085
LEU 4440.0102
SER 4450.0100
LEU 4460.0088
ARG 4470.0100
ASN 4480.0091
LEU 4490.0075
ILE 4500.0071
TYR 4510.0054
LEU 4520.0049
ASP 4530.0034
ILE 4540.0041
SER 4550.0032
HIS 4560.0041
THR 4570.0052
HIS 4580.0067
THR 4590.0071
ARG 4600.0083
VAL 4610.0084
ALA 4620.0105
PHE 4630.0110
ASN 4640.0109
GLY 4650.0112
ILE 4660.0095
PHE 4670.0089
ASN 4680.0108
GLY 4690.0109
LEU 4700.0094
SER 4710.0107
SER 4720.0099
LEU 4730.0081
GLU 4740.0075
VAL 4750.0056
LEU 4760.0048
LYS 4770.0031
MET 4780.0036
ALA 4790.0028
GLY 4800.0042
ASN 4810.0055
SER 4820.0070
PHE 4830.0081
GLN 4840.0101
GLU 4850.0104
ASN 4860.0084
PHE 4870.0084
LEU 4880.0073
PRO 4890.0092
ASP 4900.0098
ILE 4910.0094
PHE 4920.0089
THR 4930.0109
GLU 4940.0114
LEU 4950.0097
ARG 4960.0108
ASN 4970.0102
LEU 4980.0081
THR 4990.0077
PHE 5000.0057
LEU 5010.0044
ASP 5020.0027
LEU 5030.0029
SER 5040.0024
GLN 5050.0041
CYS 5060.0049
GLN 5070.0066
LEU 5080.0060
GLU 5090.0068
GLN 5100.0070
LEU 5110.0067
SER 5120.0086
PRO 5130.0084
THR 5140.0096
ALA 5150.0083
PHE 5160.0079
ASN 5170.0099
SER 5180.0110
LEU 5190.0094
SER 5200.0108
SER 5210.0104
LEU 5220.0082
GLN 5230.0080
VAL 5240.0059
LEU 5250.0042
ASN 5260.0025
MET 5270.0020
SER 5280.0030
HIS 5290.0046
ASN 5300.0048
ASN 5310.0063
PHE 5320.0053
PHE 5330.0062
SER 5340.0044
LEU 5350.0026
ASP 5360.0037
THR 5370.0043
PHE 5380.0064
PRO 5390.0067
TYR 5400.0064
LYS 5410.0083
CYS 5420.0100
LEU 5430.0090
ASN 5440.0108
SER 5450.0104
LEU 5460.0081
GLN 5470.0086
VAL 5480.0067
LEU 5490.0045
ASP 5500.0037
TYR 5510.0029
SER 5520.0050
LEU 5530.0062
ASN 5540.0055
HIS 5550.0069
ILE 5560.0053
MET 5570.0066
THR 5580.0049
SER 5590.0032
LYS 5600.0049
LYS 5610.0051
GLN 5620.0039
GLU 5630.0049
LEU 5640.0034
GLN 5650.0056
HIS 5660.0069
PHE 5670.0066
PRO 5680.0088
SER 5690.0104
SER 5700.0106
LEU 5710.0085
ALA 5720.0095
PHE 5730.0080
LEU 5740.0059
ASN 5750.0059
LEU 5760.0054
THR 5770.0076
GLN 5780.0084
ASN 5790.0073
ASP 5800.0087
PHE 5810.0079
ALA 5820.0090
CYS 5830.0097
THR 5840.0098
CYS 5850.0084
GLU 5860.0076
HIS 5870.0059
GLN 5880.0056
SER 5890.0033
PHE 5900.0035
LEU 5910.0059
GLN 5920.0058
TRP 5930.0048
ILE 5940.0062
LYS 5950.0083
ASP 5960.0078
GLN 5970.0082
ARG 5980.0094
GLN 5990.0107
LEU 6000.0088
LEU 6010.0081
VAL 6020.0095
GLU 6030.0108
VAL 6040.0107
GLU 6050.0126
ARG 6060.0112
MET 6070.0096
GLU 6080.0111
CYS 6090.0110
ALA 6100.0117
THR 6110.0122
PRO 6120.0136
SER 6130.0159
ASP 6140.0166
LYS 6150.0144
GLN 6160.0144
GLY 6170.0145
MET 6180.0139
PRO 6190.0124
VAL 6200.0100
LEU 6210.0107
SER 6220.0129
LEU 6230.0116
ASN 6240.0117
ILE 6250.0092
THR 6260.0097
CYS 6270.0098
GLU 10.0151
ALA 20.0129
ALA 30.0136
ALA 40.0125
LYS 50.0094
MET 60.0087
GLN 70.0090
ARG 80.0074
LEU 90.0046
VAL 100.0051
LEU 110.0049
LEU 120.0036
LEU 130.0030
ALA 140.0030
ILE 150.0038
SER 160.0042
LEU 170.0040
LEU 180.0032
LEU 190.0045
TYR 200.0054
GLN 210.0044
ASP 220.0038
LEU 230.0052
PRO 240.0051
VAL 250.0061
ARG 260.0071
SER 270.0057
GLU 280.0064
PHE 290.0059
GLU 300.0044
LEU 310.0038
ASP 320.0045
ARG 330.0036
ILE 340.0026
CYS 350.0031
GLY 360.0021
TYR 370.0016
GLY 380.0012
THR 390.0017
ALA 400.0021
ARG 410.0030
CYS 420.0043
ARG 430.0050
LYS 440.0063
LYS 450.0060
CYS 460.0050
ARG 470.0041
SER 480.0039
GLN 490.0028
GLU 500.0035
TYR 510.0046
ARG 520.0054
ILE 530.0054
GLY 540.0060
ARG 550.0062
CYS 560.0056
PRO 570.0062
ASN 580.0067
THR 590.0072
TYR 600.0063
ALA 610.0058
CYS 620.0047
CYS 630.0039
LEU 640.0031
ARG 650.0023
LYS 660.0031
TRP 670.0032
ASP 680.0025
GLU 690.0036
SER 700.0035
LEU 710.0042
LEU 720.0052
ASN 730.0055
ARG 740.0057
THR 750.0065
LYS 760.0057
PRO 770.0053
GLU 780.0064
ALA 790.0063
ALA 800.0047
ALA 810.0074
LYS 820.0072
LYS 830.0080
GLU 840.0094
MET 850.0096
ASN 860.0114
LEU 870.0111
SER 880.0126
VAL 890.0128
GLY 900.0141
LEU 910.0148
GLY 920.0161
GLY 930.0181
GLY 940.0181
SER 950.0170
ASN 960.0154
LEU 970.0142
SER 980.0133
VAL 990.0119
GLY 1000.0113
LEU 1010.0095
GLY 1020.0089
GLU 1030.0071
ILE 1040.0071
GLY 1050.0057
GLY 1060.0052
GLY 1070.0061
SER 1080.0063
LYS 1090.0077
LEU 1100.0084
LEU 1110.0088
ASP 1120.0096
ILE 1130.0105
ASN 1140.0114
LEU 1150.0118
GLY 1160.0138
ARG 1170.0137
GLY 1180.0145
GLY 1190.0133
GLY 1200.0131
SER 1210.0134
MET 1220.0127
VAL 1230.0119
ASP 1240.0118
LEU 1250.0107
THR 1260.0110
PHE 1270.0097
GLY 1280.0101
GLY 1290.0096
VAL 1300.0084
GLY 1310.0094
GLY 1320.0076
GLY 1330.0077
SER 1340.0066
THR 1350.0069
PHE 1360.0065
THR 1370.0060
PHE 1380.0064
PHE 1390.0058
PRO 1400.0064
LEU 1410.0061
VAL 1420.0071
ILE 1430.0088
GLY 1440.0105
GLY 1450.0124
GLY 1460.0103
SER 1470.0101
ASP 1480.0099
ALA 1490.0089
MET 1500.0079
TYR 1510.0064
LEU 1520.0066
GLY 1530.0054
PHE 1540.0059
ALA 1550.0052
ALA 1560.0051
GLY 1570.0057
GLY 1580.0063
GLY 1590.0082
SER 1600.0096
ALA 1610.0101
GLY 1620.0109
GLY 1630.0113
GLU 1640.0110
ASN 1650.0101
HIS 1660.0108
VAL 1670.0101
ALA 1680.0111
PHE 1690.0109
GLY 1700.0119
PRO 1710.0122
GLY 1720.0115
PRO 1730.0102
GLY 1740.0098
VAL 1750.0096
ASP 1760.0104
LEU 1770.0096
THR 1780.0107
PHE 1790.0102
GLY 1800.0115
GLY 1810.0125
VAL 1820.0116
GLN 1830.0112
PHE 1840.0099
ALA 1850.0099
MET 1860.0089
VAL 1870.0086
ASN 1880.0080
ASN 1890.0073
GLY 1900.0071
PRO 1910.0051
GLY 1920.0076
PRO 1930.0097
GLY 1940.0139
GLU 1950.0103
SER 1960.0105
PHE 1970.0076
THR 1980.0105
ALA 1990.0090
GLN 2000.0095
PRO 2010.0120
ALA 2020.0095
ASP 2030.0058
MET 2040.0102
GLN 2050.0111
ALA 2060.0122
GLY 2070.0127
ILE 2080.0103
LYS 2090.0106
GLY 2100.0104
PRO 2110.0101
GLY 2120.0108
PRO 2130.0104
GLY 2140.0105
GLY 2150.0096
SER 2160.0079
ILE 2170.0047
GLN 2180.0075
VAL 2190.0082
ILE 2200.0108
ASN 2210.0140
GLY 2220.0147
SER 2230.0168
THR 2240.0218
ILE 2250.0256
GLY 2260.0332
THR 2270.0393
GLY 2280.0411
SER 2290.0417
LYS 2300.0347
LYS 2310.0271
THR 2320.0221
ILE 2330.0185
LEU 2340.0139
ILE 2350.0098
TYR 2360.0062
SER 2370.0041
ILE 2380.0030
ILE 2390.0029
GLY 2400.0050
VAL 2410.0056
LYS 2420.0059
LYS 2430.0067
GLY 2440.0071
THR 2450.0065
LEU 2460.0048
ALA 2470.0049
TRP 2480.0052
ALA 2490.0084
ARG 2500.0113
THR 2510.0134
GLY 2520.0182
PHE 2530.0175
SER 2540.0219
PRO 2550.0236
ALA 2560.0222
LYS 2570.0264
LYS 2580.0285
LEU 2590.0235
ASN 2600.0293
ALA 2610.0342
GLY 2620.0263
VAL 2630.0201
VAL 2640.0159
ARG 2650.0086
VAL 2660.0062
PHE 2670.0045
PHE 2680.0041
LEU 2690.0038
ASN 2700.0050
GLN 2710.0050
LYS 2720.0044
LYS 2730.0049
ALA 2740.0055
LYS 2750.0052
ASP 2760.0057
VAL 2770.0071
LEU 2780.0080
ARG 2790.0082
LYS 2800.0085
THR 2810.0116
SER 2820.0138
ARG 2830.0090
PRO 2840.0133
MET 2850.0206
VAL 2860.0169
ASP 2870.0324
LEU 2880.0539
THR 2890.0738
PHE 2900.1011
GLY 2910.1334
GLY 2920.1622

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.