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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1173
GLU 270.0181
PRO 280.0184
CYS 290.0164
VAL 300.0171
GLU 310.0173
VAL 320.0165
VAL 330.0166
PRO 340.0176
ASN 350.0159
ILE 360.0142
THR 370.0137
TYR 380.0140
GLN 390.0138
CYS 400.0138
MET 410.0131
GLU 420.0141
LEU 430.0158
ASN 440.0157
PHE 450.0145
TYR 460.0144
LYS 470.0131
ILE 480.0119
PRO 490.0136
ASP 500.0139
ASN 510.0157
LEU 520.0147
PRO 530.0146
PHE 540.0126
SER 550.0128
THR 560.0122
LYS 570.0110
ASN 580.0107
LEU 590.0105
ASP 600.0106
LEU 610.0107
SER 620.0101
PHE 630.0113
ASN 640.0124
PRO 650.0128
LEU 660.0115
ARG 670.0112
HIS 680.0102
LEU 690.0086
GLY 700.0087
SER 710.0071
TYR 720.0070
SER 730.0084
PHE 740.0081
PHE 750.0082
SER 760.0102
PHE 770.0094
PRO 780.0083
GLU 790.0094
LEU 800.0085
GLN 810.0080
VAL 820.0075
LEU 830.0071
ASP 840.0074
LEU 850.0074
SER 860.0073
ARG 870.0087
CYS 880.0096
GLU 890.0102
ILE 900.0090
GLN 910.0094
THR 920.0087
ILE 930.0070
GLU 940.0071
ASP 950.0055
GLY 960.0045
ALA 970.0057
TYR 980.0046
GLN 990.0037
SER 1000.0051
LEU 1010.0052
SER 1020.0046
HIS 1030.0063
LEU 1040.0052
SER 1050.0052
THR 1060.0045
LEU 1070.0039
ILE 1080.0044
LEU 1090.0046
THR 1100.0047
GLY 1110.0061
ASN 1120.0071
PRO 1130.0081
ILE 1140.0074
GLN 1150.0089
SER 1160.0084
LEU 1170.0063
ALA 1180.0062
LEU 1190.0049
GLY 1200.0039
ALA 1210.0041
PHE 1220.0021
SER 1230.0016
GLY 1240.0018
LEU 1250.0024
SER 1260.0032
SER 1270.0045
LEU 1280.0034
GLN 1290.0038
LYS 1300.0028
LEU 1310.0014
VAL 1320.0021
ALA 1330.0024
VAL 1340.0026
GLU 1350.0041
THR 1360.0046
ASN 1370.0055
LEU 1380.0046
ALA 1390.0057
SER 1400.0053
LEU 1410.0043
GLU 1420.0055
ASN 1430.0052
PHE 1440.0038
PRO 1450.0032
ILE 1460.0023
GLY 1470.0036
HIS 1480.0031
LEU 1490.0025
LYS 1500.0040
THR 1510.0041
LEU 1520.0032
LYS 1530.0036
GLU 1540.0025
LEU 1550.0017
ASN 1560.0011
VAL 1570.0019
ALA 1580.0021
HIS 1590.0030
ASN 1600.0036
LEU 1610.0046
ILE 1620.0046
GLN 1630.0055
SER 1640.0056
PHE 1650.0051
LYS 1660.0057
LEU 1670.0053
PRO 1680.0056
GLU 1690.0062
TYR 1700.0051
PHE 1710.0047
SER 1720.0060
ASN 1730.0052
LEU 1740.0043
THR 1750.0054
ASN 1760.0049
LEU 1770.0038
GLU 1780.0037
HIS 1790.0026
LEU 1800.0024
ASP 1810.0017
LEU 1820.0025
SER 1830.0023
SER 1840.0029
ASN 1850.0035
LYS 1860.0044
ILE 1870.0048
GLN 1880.0055
SER 1890.0058
ILE 1900.0057
TYR 1910.0066
CYS 1920.0072
THR 1930.0075
ASP 1940.0064
LEU 1950.0062
ARG 1960.0071
VAL 1970.0064
LEU 1980.0060
HIS 1990.0071
GLN 2000.0074
MET 2010.0066
PRO 2020.0071
LEU 2030.0067
LEU 2040.0056
ASN 2050.0050
LEU 2060.0040
SER 2070.0031
LEU 2080.0029
ASP 2090.0022
LEU 2100.0029
SER 2110.0024
LEU 2120.0029
ASN 2130.0037
PRO 2140.0045
MET 2150.0046
ASN 2160.0054
PHE 2170.0058
ILE 2180.0056
GLN 2190.0065
PRO 2200.0066
GLY 2210.0069
ALA 2220.0064
PHE 2230.0058
LYS 2240.0066
GLU 2250.0067
ILE 2260.0058
ARG 2270.0053
LEU 2280.0044
HIS 2290.0040
LYS 2300.0031
LEU 2310.0029
THR 2320.0022
LEU 2330.0025
ARG 2340.0021
ASN 2350.0026
ASN 2360.0033
PHE 2370.0038
ASP 2380.0043
SER 2390.0041
LEU 2400.0036
ASN 2410.0043
VAL 2420.0046
MET 2430.0038
LYS 2440.0040
THR 2450.0049
CYS 2460.0046
ILE 2470.0041
GLN 2480.0049
GLY 2490.0053
LEU 2500.0048
ALA 2510.0053
GLY 2520.0057
LEU 2530.0050
GLU 2540.0049
VAL 2550.0040
HIS 2560.0039
ARG 2570.0029
LEU 2580.0026
VAL 2590.0018
LEU 2600.0019
GLY 2610.0016
GLU 2620.0021
PHE 2630.0021
ARG 2640.0023
ASN 2650.0027
GLU 2660.0029
GLY 2670.0037
ASN 2680.0032
LEU 2690.0032
GLU 2700.0036
LYS 2710.0031
PHE 2720.0025
ASP 2730.0024
LYS 2740.0020
SER 2750.0028
ALA 2760.0027
LEU 2770.0027
GLU 2780.0033
GLY 2790.0038
LEU 2800.0033
CYS 2810.0038
ASN 2820.0047
LEU 2830.0044
THR 2840.0044
ILE 2850.0036
GLU 2860.0036
GLU 2870.0027
PHE 2880.0021
ARG 2890.0014
LEU 2900.0010
ALA 2910.0007
TYR 2920.0012
LEU 2930.0016
ASP 2940.0025
TYR 2950.0024
TYR 2960.0021
LEU 2970.0018
ASP 2980.0020
GLY 2990.0014
ILE 3000.0009
ILE 3010.0010
ASP 3020.0015
LEU 3030.0016
PHE 3040.0015
ASN 3050.0018
CYS 3060.0025
LEU 3070.0021
THR 3080.0020
ASN 3090.0025
VAL 3100.0025
SER 3110.0028
SER 3120.0023
PHE 3130.0016
SER 3140.0012
LEU 3150.0005
VAL 3160.0003
SER 3170.0005
VAL 3180.0007
THR 3190.0013
ILE 3200.0014
GLU 3210.0020
ARG 3220.0018
VAL 3230.0013
LYS 3240.0015
ASP 3250.0009
PHE 3260.0005
SER 3270.0007
TYR 3280.0001
ASN 3290.0007
PHE 3300.0011
GLY 3310.0018
TRP 3320.0018
GLN 3330.0024
HIS 3340.0022
LEU 3350.0016
GLU 3360.0014
LEU 3370.0011
VAL 3380.0012
ASN 3390.0011
CYS 3400.0009
LYS 3410.0015
PHE 3420.0015
GLY 3430.0021
GLN 3440.0022
PHE 3450.0020
PRO 3460.0014
THR 3470.0016
LEU 3480.0013
LYS 3490.0013
LEU 3500.0013
LYS 3510.0016
SER 3520.0019
LEU 3530.0020
LYS 3540.0025
ARG 3550.0025
LEU 3560.0021
THR 3570.0020
PHE 3580.0018
THR 3590.0021
SER 3600.0020
ASN 3610.0016
LYS 3620.0018
GLY 3630.0019
GLY 3640.0022
ASN 3650.0024
ALA 3660.0027
PHE 3670.0027
SER 3680.0027
GLU 3690.0028
VAL 3700.0023
ASP 3710.0022
LEU 3720.0022
PRO 3730.0025
SER 3740.0026
LEU 3750.0028
GLU 3760.0033
PHE 3770.0030
LEU 3780.0028
ASP 3790.0027
LEU 3800.0026
SER 3810.0028
ARG 3820.0027
ASN 3830.0024
GLY 3840.0028
LEU 3850.0028
SER 3860.0032
PHE 3870.0034
LYS 3880.0038
GLY 3890.0042
CYS 3900.0041
CYS 3910.0042
SER 3920.0043
GLN 3930.0040
SER 3940.0038
ASP 3950.0034
PHE 3960.0031
GLY 3970.0032
THR 3980.0034
ILE 3990.0040
SER 4000.0039
LEU 4010.0038
LYS 4020.0041
TYR 4030.0038
LEU 4040.0036
ASP 4050.0034
LEU 4060.0033
SER 4070.0033
PHE 4080.0030
ASN 4090.0030
GLY 4100.0032
VAL 4110.0035
ILE 4120.0037
THR 4130.0041
MET 4140.0044
SER 4150.0047
SER 4160.0048
ASN 4170.0051
PHE 4180.0049
LEU 4190.0052
GLY 4200.0050
LEU 4210.0048
GLU 4220.0053
GLN 4230.0051
LEU 4240.0048
GLU 4250.0048
HIS 4260.0043
LEU 4270.0042
ASP 4280.0038
PHE 4290.0036
GLN 4300.0034
HIS 4310.0031
SER 4320.0032
ASN 4330.0033
LEU 4340.0037
LYS 4350.0040
GLN 4360.0044
MET 4370.0043
SER 4380.0046
GLU 4390.0050
PHE 4400.0052
SER 4410.0052
VAL 4420.0050
PHE 4430.0051
LEU 4440.0057
SER 4450.0058
LEU 4460.0055
ARG 4470.0060
ASN 4480.0059
LEU 4490.0053
ILE 4500.0052
TYR 4510.0046
LEU 4520.0044
ASP 4530.0039
ILE 4540.0037
SER 4550.0033
HIS 4560.0029
THR 4570.0034
HIS 4580.0031
THR 4590.0034
ARG 4600.0033
VAL 4610.0035
ALA 4620.0041
PHE 4630.0046
ASN 4640.0047
GLY 4650.0052
ILE 4660.0048
PHE 4670.0050
ASN 4680.0057
GLY 4690.0061
LEU 4700.0057
SER 4710.0062
SER 4720.0062
LEU 4730.0055
GLU 4740.0053
VAL 4750.0047
LEU 4760.0042
LYS 4770.0036
MET 4780.0032
ALA 4790.0027
GLY 4800.0023
ASN 4810.0026
SER 4820.0024
PHE 4830.0028
GLN 4840.0033
GLU 4850.0031
ASN 4860.0023
PHE 4870.0025
LEU 4880.0026
PRO 4890.0034
ASP 4900.0040
ILE 4910.0044
PHE 4920.0046
THR 4930.0052
GLU 4940.0059
LEU 4950.0055
ARG 4960.0059
ASN 4970.0060
LEU 4980.0052
THR 4990.0052
PHE 5000.0046
LEU 5010.0038
ASP 5020.0033
LEU 5030.0025
SER 5040.0022
GLN 5050.0016
CYS 5060.0017
GLN 5070.0015
LEU 5080.0016
GLU 5090.0018
GLN 5100.0019
LEU 5110.0019
SER 5120.0027
PRO 5130.0024
THR 5140.0033
ALA 5150.0032
PHE 5160.0035
ASN 5170.0040
SER 5180.0050
LEU 5190.0049
SER 5200.0054
SER 5210.0059
LEU 5220.0050
GLN 5230.0053
VAL 5240.0047
LEU 5250.0036
ASN 5260.0032
MET 5270.0023
SER 5280.0026
HIS 5290.0022
ASN 5300.0015
ASN 5310.0019
PHE 5320.0023
PHE 5330.0035
SER 5340.0033
LEU 5350.0027
ASP 5360.0019
THR 5370.0020
PHE 5380.0016
PRO 5390.0021
TYR 5400.0027
LYS 5410.0029
CYS 5420.0039
LEU 5430.0043
ASN 5440.0052
SER 5450.0058
LEU 5460.0049
GLN 5470.0057
VAL 5480.0052
LEU 5490.0040
ASP 5500.0039
TYR 5510.0032
SER 5520.0042
LEU 5530.0039
ASN 5540.0031
HIS 5550.0039
ILE 5560.0040
MET 5570.0055
THR 5580.0052
SER 5590.0040
LYS 5600.0042
LYS 5610.0032
GLN 5620.0034
GLU 5630.0021
LEU 5640.0031
GLN 5650.0031
HIS 5660.0026
PHE 5670.0033
PRO 5680.0041
SER 5690.0052
SER 5700.0058
LEU 5710.0053
ALA 5720.0066
PHE 5730.0063
LEU 5740.0052
ASN 5750.0054
LEU 5760.0051
THR 5770.0061
GLN 5780.0059
ASN 5790.0053
ASP 5800.0060
PHE 5810.0066
ALA 5820.0077
CYS 5830.0090
THR 5840.0096
CYS 5850.0098
GLU 5860.0088
HIS 5870.0074
GLN 5880.0081
SER 5890.0066
PHE 5900.0059
LEU 5910.0073
GLN 5920.0076
TRP 5930.0062
ILE 5940.0068
LYS 5950.0081
ASP 5960.0074
GLN 5970.0070
ARG 5980.0079
GLN 5990.0082
LEU 6000.0069
LEU 6010.0069
VAL 6020.0077
GLU 6030.0084
VAL 6040.0087
GLU 6050.0096
ARG 6060.0083
MET 6070.0077
GLU 6080.0085
CYS 6090.0086
ALA 6100.0082
THR 6110.0088
PRO 6120.0104
SER 6130.0111
ASP 6140.0123
LYS 6150.0112
GLN 6160.0102
GLY 6170.0102
MET 6180.0106
PRO 6190.0099
VAL 6200.0089
LEU 6210.0095
SER 6220.0111
LEU 6230.0107
ASN 6240.0116
ILE 6250.0106
THR 6260.0117
CYS 6270.0121
GLU 10.0051
ALA 20.0040
ALA 30.0049
ALA 40.0046
LYS 50.0030
MET 60.0030
GLN 70.0035
ARG 80.0029
LEU 90.0020
VAL 100.0023
LEU 110.0023
LEU 120.0024
LEU 130.0025
ALA 140.0021
ILE 150.0025
SER 160.0032
LEU 170.0029
LEU 180.0023
LEU 190.0031
TYR 200.0037
GLN 210.0029
ASP 220.0025
LEU 230.0035
PRO 240.0034
VAL 250.0042
ARG 260.0054
SER 270.0047
GLU 280.0054
PHE 290.0052
GLU 300.0042
LEU 310.0039
ASP 320.0045
ARG 330.0040
ILE 340.0033
CYS 350.0035
GLY 360.0031
TYR 370.0025
GLY 380.0023
THR 390.0027
ALA 400.0033
ARG 410.0035
CYS 420.0044
ARG 430.0046
LYS 440.0054
LYS 450.0049
CYS 460.0039
ARG 470.0033
SER 480.0028
GLN 490.0021
GLU 500.0026
TYR 510.0031
ARG 520.0040
ILE 530.0040
GLY 540.0048
ARG 550.0053
CYS 560.0051
PRO 570.0057
ASN 580.0061
THR 590.0062
TYR 600.0056
ALA 610.0049
CYS 620.0041
CYS 630.0034
LEU 640.0026
ARG 650.0019
LYS 660.0017
TRP 670.0014
ASP 680.0010
GLU 690.0016
SER 700.0018
LEU 710.0018
LEU 720.0023
ASN 730.0026
ARG 740.0024
THR 750.0025
LYS 760.0032
PRO 770.0035
GLU 780.0013
ALA 790.0040
ALA 800.0067
ALA 810.0247
LYS 820.0224
LYS 830.0228
GLU 840.0243
MET 850.0229
ASN 860.0256
LEU 870.0227
SER 880.0252
VAL 890.0233
GLY 900.0253
LEU 910.0256
GLY 920.0270
GLY 930.0323
GLY 940.0345
SER 950.0330
ASN 960.0308
LEU 970.0284
SER 980.0284
VAL 990.0254
GLY 1000.0261
LEU 1010.0221
GLY 1020.0227
GLU 1030.0195
ILE 1040.0184
GLY 1050.0153
GLY 1060.0156
GLY 1070.0153
SER 1080.0129
LYS 1090.0145
LEU 1100.0132
LEU 1110.0153
ASP 1120.0178
ILE 1130.0188
ASN 1140.0215
LEU 1150.0206
GLY 1160.0246
ARG 1170.0236
GLY 1180.0234
GLY 1190.0187
GLY 1200.0168
SER 1210.0187
MET 1220.0172
VAL 1230.0173
ASP 1240.0185
LEU 1250.0171
THR 1260.0204
PHE 1270.0190
GLY 1280.0225
GLY 1290.0218
VAL 1300.0205
GLY 1310.0225
GLY 1320.0171
GLY 1330.0153
SER 1340.0114
THR 1350.0108
PHE 1360.0089
THR 1370.0065
PHE 1380.0050
PHE 1390.0049
PRO 1400.0042
LEU 1410.0063
VAL 1420.0093
ILE 1430.0098
GLY 1440.0137
GLY 1450.0139
GLY 1460.0158
SER 1470.0163
ASP 1480.0144
ALA 1490.0138
MET 1500.0092
TYR 1510.0084
LEU 1520.0068
GLY 1530.0050
PHE 1540.0047
ALA 1550.0021
ALA 1560.0042
GLY 1570.0056
GLY 1580.0071
GLY 1590.0125
SER 1600.0167
ALA 1610.0208
GLY 1620.0233
GLY 1630.0238
GLU 1640.0222
ASN 1650.0184
HIS 1660.0179
VAL 1670.0134
ALA 1680.0142
PHE 1690.0109
GLY 1700.0116
PRO 1710.0104
GLY 1720.0074
PRO 1730.0048
GLY 1740.0078
VAL 1750.0082
ASP 1760.0133
LEU 1770.0136
THR 1780.0184
PHE 1790.0193
GLY 1800.0243
GLY 1810.0267
VAL 1820.0245
GLN 1830.0213
PHE 1840.0179
ALA 1850.0165
MET 1860.0134
VAL 1870.0151
ASN 1880.0131
ASN 1890.0196
GLY 1900.0197
PRO 1910.0255
GLY 1920.0308
PRO 1930.0292
GLY 1940.0277
GLU 1950.0274
SER 1960.0263
PHE 1970.0249
THR 1980.0225
ALA 1990.0234
GLN 2000.0257
PRO 2010.0237
ALA 2020.0275
ASP 2030.0285
MET 2040.0244
GLN 2050.0268
ALA 2060.0287
GLY 2070.0418
ILE 2080.0366
LYS 2090.0483
GLY 2100.0528
PRO 2110.0422
GLY 2120.0509
PRO 2130.0540
GLY 2140.0407
GLY 2150.0250
SER 2160.0297
ILE 2170.0235
GLN 2180.0224
VAL 2190.0195
ILE 2200.0182
ASN 2210.0211
GLY 2220.0195
SER 2230.0233
THR 2240.0260
ILE 2250.0268
GLY 2260.0319
THR 2270.0335
GLY 2280.0337
SER 2290.0319
LYS 2300.0294
LYS 2310.0251
THR 2320.0230
ILE 2330.0175
LEU 2340.0155
ILE 2350.0100
TYR 2360.0089
SER 2370.0074
ILE 2380.0050
ILE 2390.0069
GLY 2400.0039
VAL 2410.0035
LYS 2420.0038
LYS 2430.0037
GLY 2440.0051
THR 2450.0057
LEU 2460.0085
ALA 2470.0105
TRP 2480.0131
ALA 2490.0148
ARG 2500.0173
THR 2510.0179
GLY 2520.0235
PHE 2530.0238
SER 2540.0295
PRO 2550.0298
ALA 2560.0326
LYS 2570.0355
LYS 2580.0281
LEU 2590.0242
ASN 2600.0188
ALA 2610.0100
GLY 2620.0110
VAL 2630.0132
VAL 2640.0095
ARG 2650.0136
VAL 2660.0119
PHE 2670.0116
PHE 2680.0103
LEU 2690.0108
ASN 2700.0090
GLN 2710.0069
LYS 2720.0057
LYS 2730.0074
ALA 2740.0081
LYS 2750.0067
ASP 2760.0072
VAL 2770.0101
LEU 2780.0104
ARG 2790.0095
LYS 2800.0109
THR 2810.0162
SER 2820.0202
ARG 2830.0169
PRO 2840.0207
MET 2850.0242
VAL 2860.0207
ASP 2870.0147
LEU 2880.0330
THR 2890.0458
PHE 2900.0652
GLY 2910.0908
GLY 2920.1173

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.