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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1129
GLU 270.0054
PRO 280.0062
CYS 290.0055
VAL 300.0064
GLU 310.0066
VAL 320.0069
VAL 330.0070
PRO 340.0069
ASN 350.0059
ILE 360.0057
THR 370.0052
TYR 380.0048
GLN 390.0050
CYS 400.0044
MET 410.0047
GLU 420.0055
LEU 430.0058
ASN 440.0058
PHE 450.0045
TYR 460.0046
LYS 470.0033
ILE 480.0020
PRO 490.0025
ASP 500.0019
ASN 510.0031
LEU 520.0034
PRO 530.0039
PHE 540.0034
SER 550.0046
THR 560.0040
LYS 570.0044
ASN 580.0040
LEU 590.0030
ASP 600.0032
LEU 610.0028
SER 620.0033
PHE 630.0043
ASN 640.0043
PRO 650.0048
LEU 660.0036
ARG 670.0043
HIS 680.0039
LEU 690.0029
GLY 700.0035
SER 710.0035
TYR 720.0026
SER 730.0016
PHE 740.0010
PHE 750.0018
SER 760.0014
PHE 770.0022
PRO 780.0034
GLU 790.0041
LEU 800.0032
GLN 810.0038
VAL 820.0030
LEU 830.0017
ASP 840.0018
LEU 850.0015
SER 860.0022
ARG 870.0032
CYS 880.0032
GLU 890.0041
ILE 900.0035
GLN 910.0045
THR 920.0044
ILE 930.0036
GLU 940.0043
ASP 950.0047
GLY 960.0039
ALA 970.0028
TYR 980.0024
GLN 990.0036
SER 1000.0033
LEU 1010.0031
SER 1020.0045
HIS 1030.0044
LEU 1040.0034
SER 1050.0037
THR 1060.0026
LEU 1070.0015
ILE 1080.0008
LEU 1090.0009
THR 1100.0013
GLY 1110.0025
ASN 1120.0029
PRO 1130.0040
ILE 1140.0039
GLN 1150.0051
SER 1160.0052
LEU 1170.0045
ALA 1180.0053
LEU 1190.0055
GLY 1200.0050
ALA 1210.0039
PHE 1220.0036
SER 1230.0045
GLY 1240.0044
LEU 1250.0039
SER 1260.0050
SER 1270.0047
LEU 1280.0038
GLN 1290.0038
LYS 1300.0027
LEU 1310.0019
VAL 1320.0010
ALA 1330.0012
VAL 1340.0010
GLU 1350.0019
THR 1360.0023
ASN 1370.0031
LEU 1380.0030
ALA 1390.0038
SER 1400.0040
LEU 1410.0038
GLU 1420.0048
ASN 1430.0047
PHE 1440.0039
PRO 1450.0044
ILE 1460.0041
GLY 1470.0051
HIS 1480.0053
LEU 1490.0046
LYS 1500.0054
THR 1510.0050
LEU 1520.0039
LYS 1530.0038
GLU 1540.0028
LEU 1550.0023
ASN 1560.0013
VAL 1570.0016
ALA 1580.0011
HIS 1590.0016
ASN 1600.0023
LEU 1610.0031
ILE 1620.0029
GLN 1630.0034
SER 1640.0036
PHE 1650.0033
LYS 1660.0041
LEU 1670.0042
PRO 1680.0049
GLU 1690.0057
TYR 1700.0054
PHE 1710.0048
SER 1720.0057
ASN 1730.0057
LEU 1740.0049
THR 1750.0055
ASN 1760.0050
LEU 1770.0039
GLU 1780.0036
HIS 1790.0027
LEU 1800.0023
ASP 1810.0014
LEU 1820.0016
SER 1830.0009
SER 1840.0012
ASN 1850.0019
LYS 1860.0026
ILE 1870.0024
GLN 1880.0026
SER 1890.0028
ILE 1900.0030
TYR 1910.0036
CYS 1920.0042
THR 1930.0048
ASP 1940.0041
LEU 1950.0041
ARG 1960.0050
VAL 1970.0050
LEU 1980.0045
HIS 1990.0051
GLN 2000.0058
MET 2010.0054
PRO 2020.0054
LEU 2030.0054
LEU 2040.0046
ASN 2050.0042
LEU 2060.0034
SER 2070.0026
LEU 2080.0021
ASP 2090.0014
LEU 2100.0012
SER 2110.0005
LEU 2120.0006
ASN 2130.0013
PRO 2140.0016
MET 2150.0017
ASN 2160.0020
PHE 2170.0023
ILE 2180.0024
GLN 2190.0030
PRO 2200.0029
GLY 2210.0034
ALA 2220.0033
PHE 2230.0031
LYS 2240.0036
GLU 2250.0040
ILE 2260.0036
ARG 2270.0035
LEU 2280.0029
HIS 2290.0030
LYS 2300.0024
LEU 2310.0018
THR 2320.0014
LEU 2330.0010
ARG 2340.0006
ASN 2350.0001
ASN 2360.0005
PHE 2370.0007
ASP 2380.0009
SER 2390.0007
LEU 2400.0005
ASN 2410.0007
VAL 2420.0011
MET 2430.0007
LYS 2440.0008
THR 2450.0013
CYS 2460.0014
ILE 2470.0012
GLN 2480.0016
GLY 2490.0020
LEU 2500.0020
ALA 2510.0023
GLY 2520.0028
LEU 2530.0025
GLU 2540.0028
VAL 2550.0024
HIS 2560.0027
ARG 2570.0023
LEU 2580.0019
VAL 2590.0016
LEU 2600.0012
GLY 2610.0011
GLU 2620.0006
PHE 2630.0006
ARG 2640.0009
ASN 2650.0010
GLU 2660.0006
GLY 2670.0004
ASN 2680.0003
LEU 2690.0001
GLU 2700.0005
LYS 2710.0003
PHE 2720.0006
ASP 2730.0006
LYS 2740.0008
SER 2750.0006
ALA 2760.0007
LEU 2770.0009
GLU 2780.0010
GLY 2790.0012
LEU 2800.0014
CYS 2810.0017
ASN 2820.0020
LEU 2830.0020
THR 2840.0023
ILE 2850.0021
GLU 2860.0024
GLU 2870.0023
PHE 2880.0020
ARG 2890.0020
LEU 2900.0018
ALA 2910.0019
TYR 2920.0016
LEU 2930.0013
ASP 2940.0011
TYR 2950.0009
TYR 2960.0013
LEU 2970.0016
ASP 2980.0015
GLY 2990.0015
ILE 3000.0015
ILE 3010.0014
ASP 3020.0013
LEU 3030.0014
PHE 3040.0015
ASN 3050.0015
CYS 3060.0015
LEU 3070.0016
THR 3080.0015
ASN 3090.0016
VAL 3100.0018
SER 3110.0019
SER 3120.0022
PHE 3130.0021
SER 3140.0022
LEU 3150.0022
VAL 3160.0025
SER 3170.0024
VAL 3180.0022
THR 3190.0021
ILE 3200.0019
GLU 3210.0019
ARG 3220.0017
VAL 3230.0017
LYS 3240.0014
ASP 3250.0014
PHE 3260.0014
SER 3270.0011
TYR 3280.0012
ASN 3290.0011
PHE 3300.0014
GLY 3310.0014
TRP 3320.0016
GLN 3330.0017
HIS 3340.0019
LEU 3350.0019
GLU 3360.0023
LEU 3370.0025
VAL 3380.0029
ASN 3390.0032
CYS 3400.0028
LYS 3410.0028
PHE 3420.0027
GLY 3430.0027
GLN 3440.0025
PHE 3450.0022
PRO 3460.0020
THR 3470.0015
LEU 3480.0012
LYS 3490.0008
LEU 3500.0009
LYS 3510.0009
SER 3520.0012
LEU 3530.0012
LYS 3540.0013
ARG 3550.0015
LEU 3560.0016
THR 3570.0022
PHE 3580.0024
THR 3590.0029
SER 3600.0035
ASN 3610.0034
LYS 3620.0035
GLY 3630.0036
GLY 3640.0034
ASN 3650.0030
ALA 3660.0029
PHE 3670.0027
SER 3680.0025
GLU 3690.0018
VAL 3700.0011
ASP 3710.0006
LEU 3720.0006
PRO 3730.0010
SER 3740.0015
LEU 3750.0011
GLU 3760.0014
PHE 3770.0015
LEU 3780.0012
ASP 3790.0018
LEU 3800.0022
SER 3810.0028
ARG 3820.0037
ASN 3830.0039
GLY 3840.0043
LEU 3850.0037
SER 3860.0040
PHE 3870.0041
LYS 3880.0049
GLY 3890.0048
CYS 3900.0037
CYS 3910.0033
SER 3920.0032
GLN 3930.0027
SER 3940.0027
ASP 3950.0023
PHE 3960.0012
GLY 3970.0014
THR 3980.0017
ILE 3990.0027
SER 4000.0027
LEU 4010.0019
LYS 4020.0026
TYR 4030.0016
LEU 4040.0007
ASP 4050.0013
LEU 4060.0021
SER 4070.0028
PHE 4080.0042
ASN 4090.0045
GLY 4100.0056
VAL 4110.0057
ILE 4120.0050
THR 4130.0060
MET 4140.0057
SER 4150.0066
SER 4160.0059
ASN 4170.0057
PHE 4180.0045
LEU 4190.0053
GLY 4200.0046
LEU 4210.0038
GLU 4220.0051
GLN 4230.0047
LEU 4240.0034
GLU 4250.0039
HIS 4260.0025
LEU 4270.0011
ASP 4280.0009
PHE 4290.0024
GLN 4300.0030
HIS 4310.0048
SER 4320.0048
ASN 4330.0061
LEU 4340.0056
LYS 4350.0072
GLN 4360.0080
MET 4370.0073
SER 4380.0090
GLU 4390.0101
PHE 4400.0096
SER 4410.0085
VAL 4420.0066
PHE 4430.0058
LEU 4440.0075
SER 4450.0070
LEU 4460.0059
ARG 4470.0077
ASN 4480.0069
LEU 4490.0051
ILE 4500.0055
TYR 4510.0036
LEU 4520.0021
ASP 4530.0008
ILE 4540.0026
SER 4550.0030
HIS 4560.0051
THR 4570.0054
HIS 4580.0075
THR 4590.0071
ARG 4600.0088
VAL 4610.0086
ALA 4620.0109
PHE 4630.0110
ASN 4640.0110
GLY 4650.0106
ILE 4660.0084
PHE 4670.0075
ASN 4680.0094
GLY 4690.0091
LEU 4700.0076
SER 4710.0095
SER 4720.0088
LEU 4730.0067
GLU 4740.0068
VAL 4750.0046
LEU 4760.0030
LYS 4770.0010
MET 4780.0025
ALA 4790.0030
GLY 4800.0053
ASN 4810.0062
SER 4820.0082
PHE 4830.0095
GLN 4840.0120
GLU 4850.0130
ASN 4860.0106
PHE 4870.0106
LEU 4880.0089
PRO 4890.0110
ASP 4900.0114
ILE 4910.0099
PHE 4920.0091
THR 4930.0117
GLU 4940.0114
LEU 4950.0094
ARG 4960.0113
ASN 4970.0103
LEU 4980.0080
THR 4990.0082
PHE 5000.0057
LEU 5010.0037
ASP 5020.0012
LEU 5030.0024
SER 5040.0028
GLN 5050.0055
CYS 5060.0062
GLN 5070.0085
LEU 5080.0077
GLU 5090.0093
GLN 5100.0099
LEU 5110.0094
SER 5120.0117
PRO 5130.0121
THR 5140.0128
ALA 5150.0104
PHE 5160.0098
ASN 5170.0127
SER 5180.0132
LEU 5190.0110
SER 5200.0130
SER 5210.0120
LEU 5220.0094
GLN 5230.0095
VAL 5240.0067
LEU 5250.0043
ASN 5260.0018
MET 5270.0014
SER 5280.0030
HIS 5290.0058
ASN 5300.0061
ASN 5310.0082
PHE 5320.0073
PHE 5330.0082
SER 5340.0067
LEU 5350.0049
ASP 5360.0078
THR 5370.0082
PHE 5380.0112
PRO 5390.0104
TYR 5400.0097
LYS 5410.0126
CYS 5420.0139
LEU 5430.0120
ASN 5440.0144
SER 5450.0132
LEU 5460.0103
GLN 5470.0108
VAL 5480.0079
LEU 5490.0050
ASP 5500.0032
TYR 5510.0013
SER 5520.0045
LEU 5530.0067
ASN 5540.0061
HIS 5550.0078
ILE 5560.0054
MET 5570.0065
THR 5580.0061
SER 5590.0064
LYS 5600.0098
LYS 5610.0114
GLN 5620.0108
GLU 5630.0113
LEU 5640.0085
GLN 5650.0113
HIS 5660.0123
PHE 5670.0104
PRO 5680.0129
SER 5690.0148
SER 5700.0143
LEU 5710.0112
ALA 5720.0119
PHE 5730.0093
LEU 5740.0062
ASN 5750.0054
LEU 5760.0036
THR 5770.0068
GLN 5780.0084
ASN 5790.0066
ASP 5800.0084
PHE 5810.0063
ALA 5820.0080
CYS 5830.0069
THR 5840.0077
CYS 5850.0064
GLU 5860.0088
HIS 5870.0061
GLN 5880.0037
SER 5890.0053
PHE 5900.0036
LEU 5910.0009
GLN 5920.0033
TRP 5930.0052
ILE 5940.0040
LYS 5950.0065
ASP 5960.0084
GLN 5970.0092
ARG 5980.0094
GLN 5990.0122
LEU 6000.0101
LEU 6010.0081
VAL 6020.0100
GLU 6030.0111
VAL 6040.0098
GLU 6050.0120
ARG 6060.0111
MET 6070.0081
GLU 6080.0096
CYS 6090.0091
ALA 6100.0114
THR 6110.0123
PRO 6120.0130
SER 6130.0160
ASP 6140.0154
LYS 6150.0124
GLN 6160.0138
GLY 6170.0140
MET 6180.0120
PRO 6190.0102
VAL 6200.0065
LEU 6210.0075
SER 6220.0093
LEU 6230.0067
ASN 6240.0055
ILE 6250.0019
THR 6260.0015
CYS 6270.0046
GLU 10.0066
ALA 20.0054
ALA 30.0046
ALA 40.0046
LYS 50.0043
MET 60.0029
GLN 70.0025
ARG 80.0034
LEU 90.0028
VAL 100.0017
LEU 110.0025
LEU 120.0033
LEU 130.0030
ALA 140.0029
ILE 150.0037
SER 160.0038
LEU 170.0037
LEU 180.0037
LEU 190.0039
TYR 200.0040
GLN 210.0039
ASP 220.0036
LEU 230.0034
PRO 240.0033
VAL 250.0035
ARG 260.0023
SER 270.0021
GLU 280.0023
PHE 290.0032
GLU 300.0026
LEU 310.0021
ASP 320.0028
ARG 330.0030
ILE 340.0026
CYS 350.0031
GLY 360.0030
TYR 370.0026
GLY 380.0025
THR 390.0028
ALA 400.0031
ARG 410.0035
CYS 420.0041
ARG 430.0045
LYS 440.0052
LYS 450.0052
CYS 460.0048
ARG 470.0043
SER 480.0040
GLN 490.0034
GLU 500.0038
TYR 510.0043
ARG 520.0048
ILE 530.0047
GLY 540.0051
ARG 550.0053
CYS 560.0046
PRO 570.0046
ASN 580.0049
THR 590.0056
TYR 600.0053
ALA 610.0051
CYS 620.0045
CYS 630.0041
LEU 640.0036
ARG 650.0031
LYS 660.0032
TRP 670.0027
ASP 680.0018
GLU 690.0015
SER 700.0008
LEU 710.0011
LEU 720.0018
ASN 730.0015
ARG 740.0012
THR 750.0019
LYS 760.0033
PRO 770.0046
GLU 780.0049
ALA 790.0063
ALA 800.0068
ALA 810.0074
LYS 820.0080
LYS 830.0067
GLU 840.0073
MET 850.0066
ASN 860.0091
LEU 870.0088
SER 880.0113
VAL 890.0123
GLY 900.0148
LEU 910.0168
GLY 920.0195
GLY 930.0216
GLY 940.0204
SER 950.0185
ASN 960.0159
LEU 970.0136
SER 980.0122
VAL 990.0097
GLY 1000.0095
LEU 1010.0078
GLY 1020.0095
GLU 1030.0097
ILE 1040.0119
GLY 1050.0134
GLY 1060.0122
GLY 1070.0105
SER 1080.0085
LYS 1090.0071
LEU 1100.0061
LEU 1110.0060
ASP 1120.0072
ILE 1130.0095
ASN 1140.0111
LEU 1150.0135
GLY 1160.0167
ARG 1170.0190
GLY 1180.0209
GLY 1190.0213
GLY 1200.0210
SER 1210.0181
MET 1220.0170
VAL 1230.0142
ASP 1240.0131
LEU 1250.0104
THR 1260.0091
PHE 1270.0070
GLY 1280.0067
GLY 1290.0055
VAL 1300.0040
GLY 1310.0026
GLY 1320.0021
GLY 1330.0030
SER 1340.0039
THR 1350.0053
PHE 1360.0070
THR 1370.0095
PHE 1380.0100
PHE 1390.0120
PRO 1400.0130
LEU 1410.0130
VAL 1420.0151
ILE 1430.0147
GLY 1440.0166
GLY 1450.0177
GLY 1460.0169
SER 1470.0142
ASP 1480.0140
ALA 1490.0112
MET 1500.0109
TYR 1510.0087
LEU 1520.0076
GLY 1530.0074
PHE 1540.0065
ALA 1550.0080
ALA 1560.0062
GLY 1570.0059
GLY 1580.0048
GLY 1590.0046
SER 1600.0041
ALA 1610.0056
GLY 1620.0047
GLY 1630.0065
GLU 1640.0077
ASN 1650.0091
HIS 1660.0113
VAL 1670.0125
ALA 1680.0151
PHE 1690.0162
GLY 1700.0192
PRO 1710.0206
GLY 1720.0213
PRO 1730.0208
GLY 1740.0197
VAL 1750.0176
ASP 1760.0171
LEU 1770.0148
THR 1780.0140
PHE 1790.0122
GLY 1800.0115
GLY 1810.0140
VAL 1820.0157
GLN 1830.0172
PHE 1840.0178
ALA 1850.0201
MET 1860.0206
VAL 1870.0199
ASN 1880.0188
ASN 1890.0187
GLY 1900.0187
PRO 1910.0249
GLY 1920.0256
PRO 1930.0333
GLY 1940.0412
GLU 1950.0384
SER 1960.0361
PHE 1970.0340
THR 1980.0522
ALA 1990.0699
GLN 2000.0822
PRO 2010.1129
ALA 2020.0994
ASP 2030.0508
MET 2040.0747
GLN 2050.0670
ALA 2060.0563
GLY 2070.0635
ILE 2080.0355
LYS 2090.0442
GLY 2100.0479
PRO 2110.0411
GLY 2120.0431
PRO 2130.0480
GLY 2140.0571
GLY 2150.0522
SER 2160.0449
ILE 2170.0353
GLN 2180.0322
VAL 2190.0230
ILE 2200.0219
ASN 2210.0205
GLY 2220.0174
SER 2230.0195
THR 2240.0180
ILE 2250.0152
GLY 2260.0198
THR 2270.0199
GLY 2280.0198
SER 2290.0184
LYS 2300.0143
LYS 2310.0097
THR 2320.0086
ILE 2330.0085
LEU 2340.0092
ILE 2350.0095
TYR 2360.0071
SER 2370.0066
ILE 2380.0054
ILE 2390.0054
GLY 2400.0046
VAL 2410.0036
LYS 2420.0034
LYS 2430.0036
GLY 2440.0037
THR 2450.0036
LEU 2460.0039
ALA 2470.0048
TRP 2480.0056
ALA 2490.0073
ARG 2500.0088
THR 2510.0105
GLY 2520.0105
PHE 2530.0092
SER 2540.0098
PRO 2550.0105
ALA 2560.0110
LYS 2570.0133
LYS 2580.0141
LEU 2590.0140
ASN 2600.0157
ALA 2610.0140
GLY 2620.0115
VAL 2630.0102
VAL 2640.0081
ARG 2650.0074
VAL 2660.0069
PHE 2670.0058
PHE 2680.0046
LEU 2690.0048
ASN 2700.0049
GLN 2710.0057
LYS 2720.0058
LYS 2730.0064
ALA 2740.0070
LYS 2750.0075
ASP 2760.0080
VAL 2770.0088
LEU 2780.0098
ARG 2790.0106
LYS 2800.0107
THR 2810.0120
SER 2820.0119
ARG 2830.0104
PRO 2840.0100
MET 2850.0086
VAL 2860.0068
ASP 2870.0061
LEU 2880.0054
THR 2890.0072
PHE 2900.0082
GLY 2910.0108
GLY 2920.0142

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.