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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 23  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0469
GLU 270.0082
PRO 280.0110
CYS 290.0102
VAL 300.0140
GLU 310.0152
VAL 320.0169
VAL 330.0183
PRO 340.0182
ASN 350.0165
ILE 360.0156
THR 370.0131
TYR 380.0106
GLN 390.0106
CYS 400.0079
MET 410.0102
GLU 420.0128
LEU 430.0122
ASN 440.0128
PHE 450.0089
TYR 460.0111
LYS 470.0078
ILE 480.0041
PRO 490.0016
ASP 500.0039
ASN 510.0047
LEU 520.0076
PRO 530.0118
PHE 540.0132
SER 550.0152
THR 560.0118
LYS 570.0126
ASN 580.0100
LEU 590.0063
ASP 600.0059
LEU 610.0045
SER 620.0073
PHE 630.0110
ASN 640.0103
PRO 650.0127
LEU 660.0103
ARG 670.0135
HIS 680.0134
LEU 690.0114
GLY 700.0142
SER 710.0155
TYR 720.0135
SER 730.0098
PHE 740.0085
PHE 750.0118
SER 760.0097
PHE 770.0102
PRO 780.0142
GLU 790.0145
LEU 800.0108
GLN 810.0110
VAL 820.0075
LEU 830.0039
ASP 840.0026
LEU 850.0034
SER 860.0062
ARG 870.0099
CYS 880.0095
GLU 890.0132
ILE 900.0121
GLN 910.0157
THR 920.0157
ILE 930.0137
GLU 940.0164
ASP 950.0180
GLY 960.0162
ALA 970.0126
TYR 980.0113
GLN 990.0152
SER 1000.0146
LEU 1010.0126
SER 1020.0158
HIS 1030.0146
LEU 1040.0106
SER 1050.0103
THR 1060.0064
LEU 1070.0040
ILE 1080.0013
LEU 1090.0045
THR 1100.0058
GLY 1110.0095
ASN 1120.0105
PRO 1130.0142
ILE 1140.0140
GLN 1150.0178
SER 1160.0182
LEU 1170.0162
ALA 1180.0185
LEU 1190.0188
GLY 1200.0180
ALA 1210.0145
PHE 1220.0130
SER 1230.0162
GLY 1240.0160
LEU 1250.0132
SER 1260.0162
SER 1270.0140
LEU 1280.0107
GLN 1290.0097
LYS 1300.0061
LEU 1310.0047
VAL 1320.0021
ALA 1330.0049
VAL 1340.0051
GLU 1350.0084
THR 1360.0091
ASN 1370.0118
LEU 1380.0110
ALA 1390.0132
SER 1400.0131
LEU 1410.0118
GLU 1420.0150
ASN 1430.0154
PHE 1440.0129
PRO 1450.0142
ILE 1460.0126
GLY 1470.0152
HIS 1480.0162
LEU 1490.0136
LYS 1500.0151
THR 1510.0137
LEU 1520.0099
LYS 1530.0087
GLU 1540.0056
LEU 1550.0048
ASN 1560.0026
VAL 1570.0046
ALA 1580.0045
HIS 1590.0071
ASN 1600.0087
LEU 1610.0111
ILE 1620.0100
GLN 1630.0115
SER 1640.0112
PHE 1650.0094
LYS 1660.0115
LEU 1670.0116
PRO 1680.0141
GLU 1690.0161
TYR 1700.0154
PHE 1710.0130
SER 1720.0153
ASN 1730.0158
LEU 1740.0129
THR 1750.0141
ASN 1760.0125
LEU 1770.0089
GLU 1780.0076
HIS 1790.0049
LEU 1800.0041
ASP 1810.0023
LEU 1820.0043
SER 1830.0040
SER 1840.0065
ASN 1850.0077
LYS 1860.0097
ILE 1870.0085
GLN 1880.0094
SER 1890.0092
ILE 1900.0087
TYR 1910.0104
CYS 1920.0110
THR 1930.0130
ASP 1940.0114
LEU 1950.0106
ARG 1960.0131
VAL 1970.0132
LEU 1980.0112
HIS 1990.0125
GLN 2000.0147
MET 2010.0134
PRO 2020.0130
LEU 2030.0130
LEU 2040.0107
ASN 2050.0091
LEU 2060.0067
SER 2070.0040
LEU 2080.0028
ASP 2090.0014
LEU 2100.0031
SER 2110.0035
LEU 2120.0055
ASN 2130.0062
PRO 2140.0079
MET 2150.0070
ASN 2160.0081
PHE 2170.0079
ILE 2180.0069
GLN 2190.0083
PRO 2200.0073
GLY 2210.0082
ALA 2220.0082
PHE 2230.0069
LYS 2240.0080
GLU 2250.0090
ILE 2260.0079
ARG 2270.0071
LEU 2280.0054
HIS 2290.0054
LYS 2300.0033
LEU 2310.0015
THR 2320.0008
LEU 2330.0019
ARG 2340.0032
ASN 2350.0048
ASN 2360.0047
PHE 2370.0054
ASP 2380.0067
SER 2390.0062
LEU 2400.0050
ASN 2410.0050
VAL 2420.0058
MET 2430.0043
LYS 2440.0035
THR 2450.0046
CYS 2460.0043
ILE 2470.0027
GLN 2480.0034
GLY 2490.0048
LEU 2500.0038
ALA 2510.0040
GLY 2520.0055
LEU 2530.0046
GLU 2540.0050
VAL 2550.0038
HIS 2560.0047
ARG 2570.0034
LEU 2580.0021
VAL 2590.0023
LEU 2600.0025
GLY 2610.0040
GLU 2620.0045
PHE 2630.0055
ARG 2640.0065
ASN 2650.0072
GLU 2660.0067
GLY 2670.0065
ASN 2680.0059
LEU 2690.0054
GLU 2700.0065
LYS 2710.0057
PHE 2720.0046
ASP 2730.0045
LYS 2740.0038
SER 2750.0029
ALA 2760.0029
LEU 2770.0023
GLU 2780.0015
GLY 2790.0009
LEU 2800.0013
CYS 2810.0021
ASN 2820.0029
LEU 2830.0029
THR 2840.0038
ILE 2850.0033
GLU 2860.0044
GLU 2870.0043
PHE 2880.0037
ARG 2890.0040
LEU 2900.0042
ALA 2910.0046
TYR 2920.0048
LEU 2930.0049
ASP 2940.0055
TYR 2950.0054
TYR 2960.0058
LEU 2970.0054
ASP 2980.0058
GLY 2990.0057
ILE 3000.0052
ILE 3010.0053
ASP 3020.0046
LEU 3030.0043
PHE 3040.0042
ASN 3050.0042
CYS 3060.0033
LEU 3070.0040
THR 3080.0046
ASN 3090.0047
VAL 3100.0045
SER 3110.0051
SER 3120.0054
PHE 3130.0053
SER 3140.0054
LEU 3150.0055
VAL 3160.0056
SER 3170.0056
VAL 3180.0054
THR 3190.0057
ILE 3200.0057
GLU 3210.0061
ARG 3220.0062
VAL 3230.0061
LYS 3240.0064
ASP 3250.0060
PHE 3260.0059
SER 3270.0063
TYR 3280.0060
ASN 3290.0060
PHE 3300.0057
GLY 3310.0056
TRP 3320.0057
GLN 3330.0059
HIS 3340.0061
LEU 3350.0061
GLU 3360.0063
LEU 3370.0060
VAL 3380.0062
ASN 3390.0063
CYS 3400.0061
LYS 3410.0062
PHE 3420.0058
GLY 3430.0059
GLN 3440.0060
PHE 3450.0060
PRO 3460.0059
THR 3470.0061
LEU 3480.0061
LYS 3490.0061
LEU 3500.0062
LYS 3510.0062
SER 3520.0062
LEU 3530.0063
LYS 3540.0065
ARG 3550.0067
LEU 3560.0066
THR 3570.0067
PHE 3580.0066
THR 3590.0067
SER 3600.0067
ASN 3610.0067
LYS 3620.0059
GLY 3630.0056
GLY 3640.0052
ASN 3650.0051
ALA 3660.0047
PHE 3670.0048
SER 3680.0048
GLU 3690.0048
VAL 3700.0054
ASP 3710.0056
LEU 3720.0060
PRO 3730.0059
SER 3740.0065
LEU 3750.0065
GLU 3760.0067
PHE 3770.0072
LEU 3780.0068
ASP 3790.0069
LEU 3800.0065
SER 3810.0065
ARG 3820.0066
ASN 3830.0065
GLY 3840.0059
LEU 3850.0052
SER 3860.0043
PHE 3870.0031
LYS 3880.0024
GLY 3890.0010
CYS 3900.0015
CYS 3910.0022
SER 3920.0027
GLN 3930.0038
SER 3940.0030
ASP 3950.0035
PHE 3960.0049
GLY 3970.0046
THR 3980.0054
ILE 3990.0055
SER 4000.0069
LEU 4010.0064
LYS 4020.0078
TYR 4030.0073
LEU 4040.0060
ASP 4050.0062
LEU 4060.0052
SER 4070.0054
PHE 4080.0062
ASN 4090.0056
GLY 4100.0053
VAL 4110.0039
ILE 4120.0027
THR 4130.0023
MET 4140.0015
SER 4150.0027
SER 4160.0029
ASN 4170.0039
PHE 4180.0039
LEU 4190.0044
GLY 4200.0054
LEU 4210.0060
GLU 4220.0074
GLN 4230.0089
LEU 4240.0078
GLU 4250.0093
HIS 4260.0083
LEU 4270.0062
ASP 4280.0057
PHE 4290.0041
GLN 4300.0049
HIS 4310.0056
SER 4320.0047
ASN 4330.0042
LEU 4340.0023
LYS 4350.0038
GLN 4360.0048
MET 4370.0047
SER 4380.0075
GLU 4390.0085
PHE 4400.0085
SER 4410.0081
VAL 4420.0051
PHE 4430.0061
LEU 4440.0084
SER 4450.0084
LEU 4460.0086
ARG 4470.0118
ASN 4480.0123
LEU 4490.0102
ILE 4500.0119
TYR 4510.0098
LEU 4520.0069
ASP 4530.0054
ILE 4540.0025
SER 4550.0033
HIS 4560.0045
THR 4570.0037
HIS 4580.0056
THR 4590.0044
ARG 4600.0072
VAL 4610.0076
ALA 4620.0110
PHE 4630.0115
ASN 4640.0127
GLY 4650.0122
ILE 4660.0087
PHE 4670.0092
ASN 4680.0121
GLY 4690.0125
LEU 4700.0119
SER 4710.0154
SER 4720.0159
LEU 4730.0130
GLU 4740.0144
VAL 4750.0116
LEU 4760.0080
LYS 4770.0058
MET 4780.0023
ALA 4790.0026
GLY 4800.0044
ASN 4810.0040
SER 4820.0074
PHE 4830.0094
GLN 4840.0131
GLU 4850.0154
ASN 4860.0122
PHE 4870.0127
LEU 4880.0107
PRO 4890.0141
ASP 4900.0157
ILE 4910.0132
PHE 4920.0134
THR 4930.0177
GLU 4940.0175
LEU 4950.0156
ARG 4960.0194
ASN 4970.0192
LEU 4980.0157
THR 4990.0169
PHE 5000.0133
LEU 5010.0093
ASP 5020.0061
LEU 5030.0024
SER 5040.0029
GLN 5050.0056
CYS 5060.0049
GLN 5070.0093
LEU 5080.0084
GLU 5090.0116
GLN 5100.0130
LEU 5110.0127
SER 5120.0168
PRO 5130.0183
THR 5140.0197
ALA 5150.0155
PHE 5160.0158
ASN 5170.0206
SER 5180.0220
LEU 5190.0193
SER 5200.0231
SER 5210.0225
LEU 5220.0184
GLN 5230.0190
VAL 5240.0148
LEU 5250.0103
ASN 5260.0067
MET 5270.0025
SER 5280.0051
HIS 5290.0079
ASN 5300.0069
ASN 5310.0107
PHE 5320.0103
PHE 5330.0133
SER 5340.0112
LEU 5350.0080
ASP 5360.0127
THR 5370.0136
PHE 5380.0186
PRO 5390.0170
TYR 5400.0165
LYS 5410.0216
CYS 5420.0240
LEU 5430.0214
ASN 5440.0257
SER 5450.0244
LEU 5460.0195
GLN 5470.0205
VAL 5480.0159
LEU 5490.0107
ASP 5500.0080
TYR 5510.0035
SER 5520.0085
LEU 5530.0113
ASN 5540.0092
HIS 5550.0128
ILE 5560.0094
MET 5570.0130
THR 5580.0124
SER 5590.0120
LYS 5600.0179
LYS 5610.0198
GLN 5620.0189
GLU 5630.0192
LEU 5640.0139
GLN 5650.0183
HIS 5660.0206
PHE 5670.0176
PRO 5680.0222
SER 5690.0253
SER 5700.0253
LEU 5710.0198
ALA 5720.0208
PHE 5730.0170
LEU 5740.0112
ASN 5750.0104
LEU 5760.0067
THR 5770.0125
GLN 5780.0153
ASN 5790.0121
ASP 5800.0159
PHE 5810.0133
ALA 5820.0179
CYS 5830.0170
THR 5840.0201
CYS 5850.0191
GLU 5860.0217
HIS 5870.0157
GLN 5880.0122
SER 5890.0119
PHE 5900.0083
LEU 5910.0056
GLN 5920.0040
TRP 5930.0064
ILE 5940.0033
LYS 5950.0062
ASP 5960.0099
GLN 5970.0125
ARG 5980.0130
GLN 5990.0185
LEU 6000.0163
LEU 6010.0129
VAL 6020.0175
GLU 6030.0193
VAL 6040.0161
GLU 6050.0206
ARG 6060.0198
MET 6070.0148
GLU 6080.0182
CYS 6090.0185
ALA 6100.0224
THR 6110.0249
PRO 6120.0277
SER 6130.0326
ASP 6140.0321
LYS 6150.0259
GLN 6160.0273
GLY 6170.0266
MET 6180.0228
PRO 6190.0183
VAL 6200.0121
LEU 6210.0111
SER 6220.0151
LEU 6230.0133
ASN 6240.0126
ILE 6250.0089
THR 6260.0125
CYS 6270.0197
GLU 10.0095
ALA 20.0088
ALA 30.0062
ALA 40.0058
LYS 50.0071
MET 60.0061
GLN 70.0040
ARG 80.0048
LEU 90.0066
VAL 100.0056
LEU 110.0047
LEU 120.0060
LEU 130.0072
ALA 140.0065
ILE 150.0063
SER 160.0071
LEU 170.0075
LEU 180.0072
LEU 190.0070
TYR 200.0077
GLN 210.0078
ASP 220.0074
LEU 230.0070
PRO 240.0073
VAL 250.0076
ARG 260.0055
SER 270.0056
GLU 280.0066
PHE 290.0072
GLU 300.0064
LEU 310.0064
ASP 320.0074
ARG 330.0069
ILE 340.0067
CYS 350.0080
GLY 360.0077
TYR 370.0075
GLY 380.0069
THR 390.0068
ALA 400.0070
ARG 410.0076
CYS 420.0092
ARG 430.0098
LYS 440.0115
LYS 450.0112
CYS 460.0104
ARG 470.0088
SER 480.0082
GLN 490.0068
GLU 500.0082
TYR 510.0098
ARG 520.0112
ILE 530.0116
GLY 540.0127
ARG 550.0131
CYS 560.0116
PRO 570.0123
ASN 580.0124
THR 590.0138
TYR 600.0124
ALA 610.0117
CYS 620.0106
CYS 630.0092
LEU 640.0083
ARG 650.0068
LYS 660.0072
TRP 670.0066
ASP 680.0043
GLU 690.0048
SER 700.0038
LEU 710.0050
LEU 720.0070
ASN 730.0069
ARG 740.0067
THR 750.0083
LYS 760.0091
PRO 770.0095
GLU 780.0099
ALA 790.0111
ALA 800.0108
ALA 810.0130
LYS 820.0127
LYS 830.0119
GLU 840.0113
MET 850.0108
ASN 860.0100
LEU 870.0084
SER 880.0083
VAL 890.0071
GLY 900.0068
LEU 910.0067
GLY 920.0062
GLY 930.0078
GLY 940.0090
SER 950.0095
ASN 960.0093
LEU 970.0093
SER 980.0101
VAL 990.0098
GLY 1000.0111
LEU 1010.0105
GLY 1020.0123
GLU 1030.0130
ILE 1040.0131
GLY 1050.0139
GLY 1060.0119
GLY 1070.0086
SER 1080.0054
LYS 1090.0049
LEU 1100.0038
LEU 1110.0061
ASP 1120.0074
ILE 1130.0071
ASN 1140.0085
LEU 1150.0076
GLY 1160.0085
ARG 1170.0088
GLY 1180.0077
GLY 1190.0063
GLY 1200.0046
SER 1210.0042
MET 1220.0030
VAL 1230.0042
ASP 1240.0048
LEU 1250.0051
THR 1260.0075
PHE 1270.0082
GLY 1280.0108
GLY 1290.0110
VAL 1300.0119
GLY 1310.0127
GLY 1320.0102
GLY 1330.0074
SER 1340.0062
THR 1350.0038
PHE 1360.0027
THR 1370.0028
PHE 1380.0030
PHE 1390.0059
PRO 1400.0063
LEU 1410.0075
VAL 1420.0098
ILE 1430.0093
GLY 1440.0121
GLY 1450.0111
GLY 1460.0094
SER 1470.0090
ASP 1480.0070
ALA 1490.0074
MET 1500.0054
TYR 1510.0061
LEU 1520.0053
GLY 1530.0059
PHE 1540.0052
ALA 1550.0055
ALA 1560.0060
GLY 1570.0039
GLY 1580.0034
GLY 1590.0032
SER 1600.0056
ALA 1610.0078
GLY 1620.0099
GLY 1630.0102
GLU 1640.0091
ASN 1650.0065
HIS 1660.0056
VAL 1670.0032
ALA 1680.0034
PHE 1690.0023
GLY 1700.0036
PRO 1710.0050
GLY 1720.0080
PRO 1730.0099
GLY 1740.0090
VAL 1750.0062
ASP 1760.0065
LEU 1770.0059
THR 1780.0075
PHE 1790.0076
GLY 1800.0103
GLY 1810.0122
VAL 1820.0117
GLN 1830.0107
PHE 1840.0100
ALA 1850.0110
MET 1860.0110
VAL 1870.0126
ASN 1880.0128
ASN 1890.0145
GLY 1900.0148
PRO 1910.0055
GLY 1920.0132
PRO 1930.0279
GLY 1940.0363
GLU 1950.0248
SER 1960.0211
PHE 1970.0159
THR 1980.0110
ALA 1990.0201
GLN 2000.0292
PRO 2010.0432
ALA 2020.0397
ASP 2030.0117
MET 2040.0227
GLN 2050.0175
ALA 2060.0264
GLY 2070.0469
ILE 2080.0200
LYS 2090.0343
GLY 2100.0322
PRO 2110.0106
GLY 2120.0128
PRO 2130.0272
GLY 2140.0423
GLY 2150.0342
SER 2160.0332
ILE 2170.0283
GLN 2180.0234
VAL 2190.0187
ILE 2200.0143
ASN 2210.0159
GLY 2220.0158
SER 2230.0177
THR 2240.0194
ILE 2250.0215
GLY 2260.0305
THR 2270.0361
GLY 2280.0371
SER 2290.0370
LYS 2300.0289
LYS 2310.0214
THR 2320.0166
ILE 2330.0143
LEU 2340.0103
ILE 2350.0078
TYR 2360.0053
SER 2370.0038
ILE 2380.0048
ILE 2390.0034
GLY 2400.0057
VAL 2410.0050
LYS 2420.0046
LYS 2430.0046
GLY 2440.0041
THR 2450.0038
LEU 2460.0040
ALA 2470.0005
TRP 2480.0030
ALA 2490.0043
ARG 2500.0073
THR 2510.0086
GLY 2520.0125
PHE 2530.0103
SER 2540.0135
PRO 2550.0150
ALA 2560.0121
LYS 2570.0157
LYS 2580.0200
LEU 2590.0188
ASN 2600.0255
ALA 2610.0246
GLY 2620.0187
VAL 2630.0157
VAL 2640.0096
ARG 2650.0072
VAL 2660.0063
PHE 2670.0060
PHE 2680.0058
LEU 2690.0061
ASN 2700.0064
GLN 2710.0064
LYS 2720.0067
LYS 2730.0079
ALA 2740.0083
LYS 2750.0086
ASP 2760.0113
VAL 2770.0141
LEU 2780.0149
ARG 2790.0160
LYS 2800.0178
THR 2810.0230
SER 2820.0256
ARG 2830.0218
PRO 2840.0234
MET 2850.0219
VAL 2860.0196
ASP 2870.0146
LEU 2880.0165
THR 2890.0136
PHE 2900.0144
GLY 2910.0179
GLY 2920.0284

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.