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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0627
GLU 270.0074
PRO 280.0094
CYS 290.0088
VAL 300.0115
GLU 310.0122
VAL 320.0133
VAL 330.0140
PRO 340.0140
ASN 350.0125
ILE 360.0117
THR 370.0101
TYR 380.0086
GLN 390.0089
CYS 400.0071
MET 410.0087
GLU 420.0105
LEU 430.0100
ASN 440.0101
PHE 450.0071
TYR 460.0081
LYS 470.0054
ILE 480.0026
PRO 490.0020
ASP 500.0025
ASN 510.0042
LEU 520.0062
PRO 530.0089
PHE 540.0093
SER 550.0109
THR 560.0086
LYS 570.0089
ASN 580.0074
LEU 590.0052
ASP 600.0054
LEU 610.0045
SER 620.0064
PHE 630.0090
ASN 640.0082
PRO 650.0096
LEU 660.0075
ARG 670.0097
HIS 680.0092
LEU 690.0074
GLY 700.0091
SER 710.0098
TYR 720.0084
SER 730.0058
PHE 740.0049
PHE 750.0073
SER 760.0061
PHE 770.0066
PRO 780.0093
GLU 790.0098
LEU 800.0071
GLN 810.0073
VAL 820.0051
LEU 830.0026
ASP 840.0029
LEU 850.0033
SER 860.0055
ARG 870.0079
CYS 880.0074
GLU 890.0098
ILE 900.0087
GLN 910.0111
THR 920.0108
ILE 930.0091
GLU 940.0108
ASP 950.0117
GLY 960.0103
ALA 970.0079
TYR 980.0069
GLN 990.0096
SER 1000.0092
LEU 1010.0079
SER 1020.0100
HIS 1030.0093
LEU 1040.0065
SER 1050.0063
THR 1060.0037
LEU 1070.0021
ILE 1080.0016
LEU 1090.0036
THR 1100.0049
GLY 1110.0074
ASN 1120.0079
PRO 1130.0104
ILE 1140.0099
GLN 1150.0125
SER 1160.0125
LEU 1170.0109
ALA 1180.0123
LEU 1190.0124
GLY 1200.0116
ALA 1210.0094
PHE 1220.0082
SER 1230.0102
GLY 1240.0100
LEU 1250.0081
SER 1260.0101
SER 1270.0084
LEU 1280.0062
GLN 1290.0055
LYS 1300.0033
LEU 1310.0027
VAL 1320.0017
ALA 1330.0036
VAL 1340.0042
GLU 1350.0062
THR 1360.0065
ASN 1370.0081
LEU 1380.0074
ALA 1390.0090
SER 1400.0087
LEU 1410.0076
GLU 1420.0097
ASN 1430.0100
PHE 1440.0083
PRO 1450.0090
ILE 1460.0078
GLY 1470.0095
HIS 1480.0100
LEU 1490.0082
LYS 1500.0091
THR 1510.0081
LEU 1520.0055
LYS 1530.0046
GLU 1540.0028
LEU 1550.0028
ASN 1560.0022
VAL 1570.0031
ALA 1580.0036
HIS 1590.0051
ASN 1600.0058
LEU 1610.0072
ILE 1620.0069
GLN 1630.0078
SER 1640.0075
PHE 1650.0062
LYS 1660.0073
LEU 1670.0073
PRO 1680.0089
GLU 1690.0099
TYR 1700.0094
PHE 1710.0078
SER 1720.0091
ASN 1730.0095
LEU 1740.0076
THR 1750.0081
ASN 1760.0070
LEU 1770.0048
GLU 1780.0038
HIS 1790.0023
LEU 1800.0025
ASP 1810.0022
LEU 1820.0033
SER 1830.0035
SER 1840.0048
ASN 1850.0054
LYS 1860.0065
ILE 1870.0062
GLN 1880.0068
SER 1890.0066
ILE 1900.0060
TYR 1910.0068
CYS 1920.0070
THR 1930.0082
ASP 1940.0072
LEU 1950.0065
ARG 1960.0079
VAL 1970.0080
LEU 1980.0066
HIS 1990.0072
GLN 2000.0085
MET 2010.0077
PRO 2020.0071
LEU 2030.0071
LEU 2040.0058
ASN 2050.0047
LEU 2060.0034
SER 2070.0018
LEU 2080.0019
ASP 2090.0020
LEU 2100.0031
SER 2110.0035
LEU 2120.0047
ASN 2130.0051
PRO 2140.0062
MET 2150.0055
ASN 2160.0062
PHE 2170.0060
ILE 2180.0051
GLN 2190.0057
PRO 2200.0049
GLY 2210.0050
ALA 2220.0052
PHE 2230.0042
LYS 2240.0044
GLU 2250.0049
ILE 2260.0044
ARG 2270.0036
LEU 2280.0027
HIS 2290.0024
LYS 2300.0014
LEU 2310.0015
THR 2320.0019
LEU 2330.0027
ARG 2340.0034
ASN 2350.0044
ASN 2360.0044
PHE 2370.0050
ASP 2380.0059
SER 2390.0055
LEU 2400.0048
ASN 2410.0047
VAL 2420.0051
MET 2430.0042
LYS 2440.0036
THR 2450.0041
CYS 2460.0039
ILE 2470.0029
GLN 2480.0030
GLY 2490.0037
LEU 2500.0028
ALA 2510.0025
GLY 2520.0029
LEU 2530.0026
GLU 2540.0025
VAL 2550.0018
HIS 2560.0020
ARG 2570.0014
LEU 2580.0013
VAL 2590.0019
LEU 2600.0026
GLY 2610.0035
GLU 2620.0043
PHE 2630.0047
ARG 2640.0052
ASN 2650.0056
GLU 2660.0055
GLY 2670.0059
ASN 2680.0055
LEU 2690.0052
GLU 2700.0059
LYS 2710.0054
PHE 2720.0045
ASP 2730.0043
LYS 2740.0037
SER 2750.0031
ALA 2760.0032
LEU 2770.0025
GLU 2780.0021
GLY 2790.0017
LEU 2800.0014
CYS 2810.0014
ASN 2820.0015
LEU 2830.0016
THR 2840.0019
ILE 2850.0016
GLU 2860.0021
GLU 2870.0021
PHE 2880.0020
ARG 2890.0024
LEU 2900.0029
ALA 2910.0032
TYR 2920.0041
LEU 2930.0044
ASP 2940.0051
TYR 2950.0051
TYR 2960.0053
LEU 2970.0047
ASP 2980.0052
GLY 2990.0049
ILE 3000.0042
ILE 3010.0045
ASP 3020.0039
LEU 3030.0036
PHE 3040.0033
ASN 3050.0033
CYS 3060.0026
LEU 3070.0029
THR 3080.0035
ASN 3090.0035
VAL 3100.0029
SER 3110.0032
SER 3120.0030
PHE 3130.0031
SER 3140.0030
LEU 3150.0034
VAL 3160.0034
SER 3170.0041
VAL 3180.0040
THR 3190.0047
ILE 3200.0047
GLU 3210.0054
ARG 3220.0056
VAL 3230.0053
LYS 3240.0058
ASP 3250.0053
PHE 3260.0049
SER 3270.0056
TYR 3280.0053
ASN 3290.0052
PHE 3300.0046
GLY 3310.0045
TRP 3320.0039
GLN 3330.0039
HIS 3340.0036
LEU 3350.0037
GLU 3360.0035
LEU 3370.0034
VAL 3380.0034
ASN 3390.0037
CYS 3400.0039
LYS 3410.0045
PHE 3420.0048
GLY 3430.0055
GLN 3440.0056
PHE 3450.0052
PRO 3460.0050
THR 3470.0054
LEU 3480.0051
LYS 3490.0055
LEU 3500.0052
LYS 3510.0055
SER 3520.0049
LEU 3530.0046
LYS 3540.0044
ARG 3550.0040
LEU 3560.0040
THR 3570.0035
PHE 3580.0038
THR 3590.0034
SER 3600.0035
ASN 3610.0040
LYS 3620.0042
GLY 3630.0046
GLY 3640.0050
ASN 3650.0047
ALA 3660.0050
PHE 3670.0045
SER 3680.0050
GLU 3690.0050
VAL 3700.0050
ASP 3710.0053
LEU 3720.0050
PRO 3730.0053
SER 3740.0051
LEU 3750.0046
GLU 3760.0044
PHE 3770.0040
LEU 3780.0039
ASP 3790.0035
LEU 3800.0036
SER 3810.0032
ARG 3820.0031
ASN 3830.0036
GLY 3840.0035
LEU 3850.0037
SER 3860.0038
PHE 3870.0035
LYS 3880.0036
GLY 3890.0035
CYS 3900.0033
CYS 3910.0034
SER 3920.0037
GLN 3930.0042
SER 3940.0044
ASP 3950.0042
PHE 3960.0045
GLY 3970.0047
THR 3980.0046
ILE 3990.0045
SER 4000.0046
LEU 4010.0042
LYS 4020.0042
TYR 4030.0038
LEU 4040.0034
ASP 4050.0032
LEU 4060.0030
SER 4070.0024
PHE 4080.0024
ASN 4090.0029
GLY 4100.0031
VAL 4110.0030
ILE 4120.0027
THR 4130.0026
MET 4140.0025
SER 4150.0026
SER 4160.0028
ASN 4170.0026
PHE 4180.0030
LEU 4190.0032
GLY 4200.0038
LEU 4210.0039
GLU 4220.0037
GLN 4230.0043
LEU 4240.0040
GLU 4250.0043
HIS 4260.0040
LEU 4270.0032
ASP 4280.0028
PHE 4290.0024
GLN 4300.0021
HIS 4310.0020
SER 4320.0023
ASN 4330.0021
LEU 4340.0021
LYS 4350.0020
GLN 4360.0019
MET 4370.0019
SER 4380.0022
GLU 4390.0021
PHE 4400.0024
SER 4410.0029
VAL 4420.0025
PHE 4430.0031
LEU 4440.0033
SER 4450.0035
LEU 4460.0039
ARG 4470.0046
ASN 4480.0050
LEU 4490.0045
ILE 4500.0050
TYR 4510.0044
LEU 4520.0035
ASP 4530.0029
ILE 4540.0023
SER 4550.0020
HIS 4560.0016
THR 4570.0018
HIS 4580.0012
THR 4590.0013
ARG 4600.0014
VAL 4610.0020
ALA 4620.0026
PHE 4630.0031
ASN 4640.0039
GLY 4650.0040
ILE 4660.0032
PHE 4670.0037
ASN 4680.0044
GLY 4690.0047
LEU 4700.0049
SER 4710.0059
SER 4720.0062
LEU 4730.0054
GLU 4740.0059
VAL 4750.0051
LEU 4760.0041
LYS 4770.0032
MET 4780.0023
ALA 4790.0019
GLY 4800.0012
ASN 4810.0009
SER 4820.0009
PHE 4830.0018
GLN 4840.0027
GLU 4850.0032
ASN 4860.0023
PHE 4870.0029
LEU 4880.0029
PRO 4890.0042
ASP 4900.0051
ILE 4910.0046
PHE 4920.0051
THR 4930.0064
GLU 4940.0065
LEU 4950.0062
ARG 4960.0074
ASN 4970.0074
LEU 4980.0064
THR 4990.0068
PHE 5000.0058
LEU 5010.0046
ASP 5020.0032
LEU 5030.0022
SER 5040.0018
GLN 5050.0013
CYS 5060.0004
GLN 5070.0011
LEU 5080.0011
GLU 5090.0020
GLN 5100.0029
LEU 5110.0034
SER 5120.0050
PRO 5130.0056
THR 5140.0065
ALA 5150.0053
PHE 5160.0059
ASN 5170.0073
SER 5180.0080
LEU 5190.0074
SER 5200.0087
SER 5210.0088
LEU 5220.0075
GLN 5230.0078
VAL 5240.0065
LEU 5250.0050
ASN 5260.0039
MET 5270.0023
SER 5280.0027
HIS 5290.0025
ASN 5300.0011
ASN 5310.0019
PHE 5320.0015
PHE 5330.0027
SER 5340.0016
LEU 5350.0010
ASP 5360.0030
THR 5370.0043
PHE 5380.0057
PRO 5390.0056
TYR 5400.0061
LYS 5410.0076
CYS 5420.0086
LEU 5430.0082
ASN 5440.0097
SER 5450.0096
LEU 5460.0080
GLN 5470.0086
VAL 5480.0072
LEU 5490.0054
ASP 5500.0046
TYR 5510.0030
SER 5520.0043
LEU 5530.0043
ASN 5540.0028
HIS 5550.0035
ILE 5560.0023
MET 5570.0035
THR 5580.0023
SER 5590.0014
LYS 5600.0036
LYS 5610.0045
GLN 5620.0042
GLU 5630.0051
LEU 5640.0037
GLN 5650.0057
HIS 5660.0069
PHE 5670.0066
PRO 5680.0084
SER 5690.0096
SER 5700.0100
LEU 5710.0083
ALA 5720.0090
PHE 5730.0079
LEU 5740.0060
ASN 5750.0058
LEU 5760.0045
THR 5770.0062
GLN 5780.0064
ASN 5790.0048
ASP 5800.0055
PHE 5810.0049
ALA 5820.0059
CYS 5830.0064
THR 5840.0066
CYS 5850.0055
GLU 5860.0055
HIS 5870.0035
GLN 5880.0025
SER 5890.0005
PHE 5900.0006
LEU 5910.0028
GLN 5920.0027
TRP 5930.0030
ILE 5940.0041
LYS 5950.0056
ASP 5960.0056
GLN 5970.0066
ARG 5980.0075
GLN 5990.0091
LEU 6000.0079
LEU 6010.0071
VAL 6020.0087
GLU 6030.0094
VAL 6040.0086
GLU 6050.0099
ARG 6060.0091
MET 6070.0074
GLU 6080.0082
CYS 6090.0077
ALA 6100.0083
THR 6110.0086
PRO 6120.0100
SER 6130.0120
ASP 6140.0125
LYS 6150.0106
GLN 6160.0108
GLY 6170.0110
MET 6180.0103
PRO 6190.0092
VAL 6200.0069
LEU 6210.0075
SER 6220.0090
LEU 6230.0076
ASN 6240.0074
ILE 6250.0050
THR 6260.0053
CYS 6270.0063
GLU 10.0115
ALA 20.0084
ALA 30.0036
ALA 40.0058
LYS 50.0059
MET 60.0035
GLN 70.0017
ARG 80.0015
LEU 90.0041
VAL 100.0058
LEU 110.0042
LEU 120.0031
LEU 130.0070
ALA 140.0080
ILE 150.0058
SER 160.0064
LEU 170.0085
LEU 180.0079
LEU 190.0060
TYR 200.0075
GLN 210.0086
ASP 220.0072
LEU 230.0061
PRO 240.0068
VAL 250.0080
ARG 260.0048
SER 270.0042
GLU 280.0041
PHE 290.0034
GLU 300.0033
LEU 310.0034
ASP 320.0034
ARG 330.0026
ILE 340.0029
CYS 350.0033
GLY 360.0030
TYR 370.0032
GLY 380.0031
THR 390.0029
ALA 400.0028
ARG 410.0027
CYS 420.0032
ARG 430.0032
LYS 440.0039
LYS 450.0038
CYS 460.0037
ARG 470.0031
SER 480.0029
GLN 490.0024
GLU 500.0029
TYR 510.0036
ARG 520.0041
ILE 530.0044
GLY 540.0049
ARG 550.0049
CYS 560.0046
PRO 570.0051
ASN 580.0048
THR 590.0053
TYR 600.0045
ALA 610.0041
CYS 620.0039
CYS 630.0033
LEU 640.0030
ARG 650.0024
LYS 660.0027
TRP 670.0029
ASP 680.0020
GLU 690.0027
SER 700.0029
LEU 710.0035
LEU 720.0042
ASN 730.0045
ARG 740.0044
THR 750.0050
LYS 760.0037
PRO 770.0034
GLU 780.0029
ALA 790.0044
ALA 800.0073
ALA 810.0192
LYS 820.0175
LYS 830.0160
GLU 840.0158
MET 850.0138
ASN 860.0189
LEU 870.0173
SER 880.0219
VAL 890.0235
GLY 900.0270
LEU 910.0327
GLY 920.0359
GLY 930.0425
GLY 940.0410
SER 950.0395
ASN 960.0332
LEU 970.0298
SER 980.0260
VAL 990.0209
GLY 1000.0189
LEU 1010.0135
GLY 1020.0154
GLU 1030.0150
ILE 1040.0146
GLY 1050.0152
GLY 1060.0123
GLY 1070.0084
SER 1080.0056
LYS 1090.0056
LEU 1100.0070
LEU 1110.0141
ASP 1120.0212
ILE 1130.0247
ASN 1140.0316
LEU 1150.0342
GLY 1160.0415
ARG 1170.0465
GLY 1180.0456
GLY 1190.0421
GLY 1200.0358
SER 1210.0314
MET 1220.0251
VAL 1230.0230
ASP 1240.0180
LEU 1250.0150
THR 1260.0137
PHE 1270.0114
GLY 1280.0141
GLY 1290.0124
VAL 1300.0124
GLY 1310.0145
GLY 1320.0100
GLY 1330.0086
SER 1340.0037
THR 1350.0043
PHE 1360.0041
THR 1370.0094
PHE 1380.0113
PHE 1390.0168
PRO 1400.0193
LEU 1410.0232
VAL 1420.0272
ILE 1430.0302
GLY 1440.0357
GLY 1450.0379
GLY 1460.0424
SER 1470.0397
ASP 1480.0359
ALA 1490.0318
MET 1500.0258
TYR 1510.0218
LEU 1520.0171
GLY 1530.0152
PHE 1540.0107
ALA 1550.0101
ALA 1560.0052
GLY 1570.0066
GLY 1580.0074
GLY 1590.0098
SER 1600.0117
ALA 1610.0132
GLY 1620.0134
GLY 1630.0111
GLU 1640.0089
ASN 1650.0046
HIS 1660.0078
VAL 1670.0105
ALA 1680.0141
PHE 1690.0196
GLY 1700.0214
PRO 1710.0258
GLY 1720.0241
PRO 1730.0264
GLY 1740.0211
VAL 1750.0177
ASP 1760.0119
LEU 1770.0089
THR 1780.0038
PHE 1790.0051
GLY 1800.0086
GLY 1810.0078
VAL 1820.0091
GLN 1830.0077
PHE 1840.0127
ALA 1850.0160
MET 1860.0221
VAL 1870.0246
ASN 1880.0272
ASN 1890.0297
GLY 1900.0322
PRO 1910.0167
GLY 1920.0163
PRO 1930.0475
GLY 1940.0596
GLU 1950.0359
SER 1960.0276
PHE 1970.0262
THR 1980.0175
ALA 1990.0195
GLN 2000.0252
PRO 2010.0208
ALA 2020.0271
ASP 2030.0274
MET 2040.0173
GLN 2050.0173
ALA 2060.0217
GLY 2070.0501
ILE 2080.0243
LYS 2090.0539
GLY 2100.0381
PRO 2110.0229
GLY 2120.0171
PRO 2130.0440
GLY 2140.0627
GLY 2150.0424
SER 2160.0420
ILE 2170.0300
GLN 2180.0237
VAL 2190.0168
ILE 2200.0173
ASN 2210.0198
GLY 2220.0095
SER 2230.0079
THR 2240.0043
ILE 2250.0086
GLY 2260.0150
THR 2270.0221
GLY 2280.0272
SER 2290.0310
LYS 2300.0262
LYS 2310.0165
THR 2320.0141
ILE 2330.0103
LEU 2340.0093
ILE 2350.0085
TYR 2360.0094
SER 2370.0088
ILE 2380.0083
ILE 2390.0081
GLY 2400.0075
VAL 2410.0073
LYS 2420.0063
LYS 2430.0072
GLY 2440.0083
THR 2450.0077
LEU 2460.0100
ALA 2470.0107
TRP 2480.0109
ALA 2490.0114
ARG 2500.0117
THR 2510.0142
GLY 2520.0167
PHE 2530.0160
SER 2540.0205
PRO 2550.0216
ALA 2560.0232
LYS 2570.0280
LYS 2580.0294
LEU 2590.0257
ASN 2600.0306
ALA 2610.0300
GLY 2620.0239
VAL 2630.0187
VAL 2640.0122
ARG 2650.0091
VAL 2660.0069
PHE 2670.0091
PHE 2680.0062
LEU 2690.0097
ASN 2700.0096
GLN 2710.0081
LYS 2720.0055
LYS 2730.0075
ALA 2740.0094
LYS 2750.0078
ASP 2760.0083
VAL 2770.0151
LEU 2780.0148
ARG 2790.0130
LYS 2800.0177
THR 2810.0281
SER 2820.0343
ARG 2830.0336
PRO 2840.0400
MET 2850.0426
VAL 2860.0401
ASP 2870.0317
LEU 2880.0327
THR 2890.0246
PHE 2900.0267
GLY 2910.0221
GLY 2920.0275

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.