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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0749
GLU 270.0057
PRO 280.0064
CYS 290.0053
VAL 300.0055
GLU 310.0048
VAL 320.0049
VAL 330.0042
PRO 340.0037
ASN 350.0025
ILE 360.0025
THR 370.0031
TYR 380.0036
GLN 390.0043
CYS 400.0043
MET 410.0047
GLU 420.0055
LEU 430.0059
ASN 440.0060
PHE 450.0052
TYR 460.0054
LYS 470.0047
ILE 480.0038
PRO 490.0042
ASP 500.0044
ASN 510.0046
LEU 520.0035
PRO 530.0027
PHE 540.0024
SER 550.0017
THR 560.0018
LYS 570.0019
ASN 580.0023
LEU 590.0022
ASP 600.0029
LEU 610.0031
SER 620.0034
PHE 630.0042
ASN 640.0044
PRO 650.0046
LEU 660.0039
ARG 670.0037
HIS 680.0037
LEU 690.0033
GLY 700.0040
SER 710.0041
TYR 720.0039
SER 730.0035
PHE 740.0029
PHE 750.0036
SER 760.0033
PHE 770.0023
PRO 780.0027
GLU 790.0021
LEU 800.0017
GLN 810.0022
VAL 820.0021
LEU 830.0016
ASP 840.0020
LEU 850.0020
SER 860.0025
ARG 870.0030
CYS 880.0030
GLU 890.0032
ILE 900.0027
GLN 910.0029
THR 920.0031
ILE 930.0028
GLU 940.0036
ASP 950.0039
GLY 960.0037
ALA 970.0032
TYR 980.0027
GLN 990.0036
SER 1000.0034
LEU 1010.0027
SER 1020.0034
HIS 1030.0030
LEU 1040.0024
SER 1050.0028
THR 1060.0023
LEU 1070.0018
ILE 1080.0017
LEU 1090.0014
THR 1100.0019
GLY 1110.0021
ASN 1120.0020
PRO 1130.0022
ILE 1140.0019
GLN 1150.0024
SER 1160.0028
LEU 1170.0026
ALA 1180.0033
LEU 1190.0035
GLY 1200.0036
ALA 1210.0028
PHE 1220.0028
SER 1230.0036
GLY 1240.0036
LEU 1250.0031
SER 1260.0039
SER 1270.0036
LEU 1280.0030
GLN 1290.0033
LYS 1300.0027
LEU 1310.0022
VAL 1320.0020
ALA 1330.0016
VAL 1340.0018
GLU 1350.0016
THR 1360.0013
ASN 1370.0013
LEU 1380.0013
ALA 1390.0013
SER 1400.0015
LEU 1410.0019
GLU 1420.0021
ASN 1430.0021
PHE 1440.0021
PRO 1450.0026
ILE 1460.0027
GLY 1470.0032
HIS 1480.0036
LEU 1490.0033
LYS 1500.0039
THR 1510.0038
LEU 1520.0032
LYS 1530.0033
GLU 1540.0029
LEU 1550.0024
ASN 1560.0021
VAL 1570.0019
ALA 1580.0019
HIS 1590.0016
ASN 1600.0014
LEU 1610.0012
ILE 1620.0014
GLN 1630.0013
SER 1640.0014
PHE 1650.0017
LYS 1660.0018
LEU 1670.0021
PRO 1680.0023
GLU 1690.0027
TYR 1700.0029
PHE 1710.0028
SER 1720.0034
ASN 1730.0036
LEU 1740.0033
THR 1750.0038
ASN 1760.0038
LEU 1770.0031
GLU 1780.0032
HIS 1790.0029
LEU 1800.0025
ASP 1810.0022
LEU 1820.0020
SER 1830.0020
SER 1840.0017
ASN 1850.0015
LYS 1860.0013
ILE 1870.0015
GLN 1880.0015
SER 1890.0015
ILE 1900.0016
TYR 1910.0016
CYS 1920.0017
THR 1930.0017
ASP 1940.0017
LEU 1950.0020
ARG 1960.0022
VAL 1970.0024
LEU 1980.0025
HIS 1990.0026
GLN 2000.0029
MET 2010.0031
PRO 2020.0033
LEU 2030.0035
LEU 2040.0031
ASN 2050.0032
LEU 2060.0028
SER 2070.0027
LEU 2080.0024
ASP 2090.0023
LEU 2100.0021
SER 2110.0021
LEU 2120.0019
ASN 2130.0018
PRO 2140.0016
MET 2150.0016
ASN 2160.0016
PHE 2170.0016
ILE 2180.0017
GLN 2190.0016
PRO 2200.0018
GLY 2210.0018
ALA 2220.0018
PHE 2230.0020
LYS 2240.0022
GLU 2250.0024
ILE 2260.0023
ARG 2270.0026
LEU 2280.0025
HIS 2290.0027
LYS 2300.0026
LEU 2310.0023
THR 2320.0023
LEU 2330.0021
ARG 2340.0022
ASN 2350.0021
ASN 2360.0019
PHE 2370.0018
ASP 2380.0017
SER 2390.0017
LEU 2400.0017
ASN 2410.0016
VAL 2420.0017
MET 2430.0018
LYS 2440.0018
THR 2450.0017
CYS 2460.0017
ILE 2470.0019
GLN 2480.0018
GLY 2490.0018
LEU 2500.0019
ALA 2510.0020
GLY 2520.0022
LEU 2530.0022
GLU 2540.0023
VAL 2550.0023
HIS 2560.0025
ARG 2570.0024
LEU 2580.0023
VAL 2590.0023
LEU 2600.0022
GLY 2610.0022
GLU 2620.0022
PHE 2630.0023
ARG 2640.0023
ASN 2650.0023
GLU 2660.0021
GLY 2670.0021
ASN 2680.0020
LEU 2690.0019
GLU 2700.0018
LYS 2710.0018
PHE 2720.0019
ASP 2730.0018
LYS 2740.0017
SER 2750.0017
ALA 2760.0018
LEU 2770.0019
GLU 2780.0018
GLY 2790.0018
LEU 2800.0019
CYS 2810.0019
ASN 2820.0020
LEU 2830.0020
THR 2840.0021
ILE 2850.0021
GLU 2860.0021
GLU 2870.0022
PHE 2880.0022
ARG 2890.0023
LEU 2900.0023
ALA 2910.0024
TYR 2920.0027
LEU 2930.0024
ASP 2940.0025
TYR 2950.0022
TYR 2960.0024
LEU 2970.0021
ASP 2980.0020
GLY 2990.0018
ILE 3000.0018
ILE 3010.0016
ASP 3020.0017
LEU 3030.0018
PHE 3040.0018
ASN 3050.0017
CYS 3060.0017
LEU 3070.0018
THR 3080.0016
ASN 3090.0016
VAL 3100.0018
SER 3110.0018
SER 3120.0020
PHE 3130.0020
SER 3140.0021
LEU 3150.0022
VAL 3160.0024
SER 3170.0026
VAL 3180.0024
THR 3190.0024
ILE 3200.0021
GLU 3210.0021
ARG 3220.0018
VAL 3230.0017
LYS 3240.0016
ASP 3250.0015
PHE 3260.0015
SER 3270.0013
TYR 3280.0013
ASN 3290.0012
PHE 3300.0013
GLY 3310.0013
TRP 3320.0014
GLN 3330.0015
HIS 3340.0017
LEU 3350.0017
GLU 3360.0019
LEU 3370.0021
VAL 3380.0023
ASN 3390.0024
CYS 3400.0023
LYS 3410.0023
PHE 3420.0020
GLY 3430.0020
GLN 3440.0018
PHE 3450.0016
PRO 3460.0015
THR 3470.0013
LEU 3480.0012
LYS 3490.0010
LEU 3500.0010
LYS 3510.0008
SER 3520.0009
LEU 3530.0011
LYS 3540.0011
ARG 3550.0013
LEU 3560.0014
THR 3570.0016
PHE 3580.0017
THR 3590.0019
SER 3600.0021
ASN 3610.0020
LYS 3620.0020
GLY 3630.0020
GLY 3640.0017
ASN 3650.0014
ALA 3660.0012
PHE 3670.0011
SER 3680.0011
GLU 3690.0009
VAL 3700.0009
ASP 3710.0007
LEU 3720.0007
PRO 3730.0005
SER 3740.0006
LEU 3750.0007
GLU 3760.0007
PHE 3770.0009
LEU 3780.0010
ASP 3790.0012
LEU 3800.0013
SER 3810.0014
ARG 3820.0015
ASN 3830.0015
GLY 3840.0013
LEU 3850.0012
SER 3860.0011
PHE 3870.0006
LYS 3880.0008
GLY 3890.0009
CYS 3900.0005
CYS 3910.0005
SER 3920.0005
GLN 3930.0005
SER 3940.0008
ASP 3950.0007
PHE 3960.0006
GLY 3970.0006
THR 3980.0003
ILE 3990.0001
SER 4000.0003
LEU 4010.0003
LYS 4020.0004
TYR 4030.0006
LEU 4040.0004
ASP 4050.0007
LEU 4060.0006
SER 4070.0011
PHE 4080.0009
ASN 4090.0007
GLY 4100.0004
VAL 4110.0006
ILE 4120.0004
THR 4130.0008
MET 4140.0010
SER 4150.0012
SER 4160.0012
ASN 4170.0012
PHE 4180.0008
LEU 4190.0010
GLY 4200.0007
LEU 4210.0005
GLU 4220.0008
GLN 4230.0006
LEU 4240.0006
GLU 4250.0009
HIS 4260.0008
LEU 4270.0004
ASP 4280.0006
PHE 4290.0005
GLN 4300.0008
HIS 4310.0008
SER 4320.0007
ASN 4330.0008
LEU 4340.0009
LYS 4350.0012
GLN 4360.0015
MET 4370.0015
SER 4380.0019
GLU 4390.0019
PHE 4400.0019
SER 4410.0018
VAL 4420.0014
PHE 4430.0014
LEU 4440.0016
SER 4450.0014
LEU 4460.0012
ARG 4470.0015
ASN 4480.0013
LEU 4490.0013
ILE 4500.0014
TYR 4510.0014
LEU 4520.0012
ASP 4530.0013
ILE 4540.0014
SER 4550.0017
HIS 4560.0018
THR 4570.0016
HIS 4580.0019
THR 4590.0019
ARG 4600.0021
VAL 4610.0021
ALA 4620.0022
PHE 4630.0022
ASN 4640.0023
GLY 4650.0022
ILE 4660.0019
PHE 4670.0020
ASN 4680.0021
GLY 4690.0019
LEU 4700.0019
SER 4710.0020
SER 4720.0019
LEU 4730.0019
GLU 4740.0020
VAL 4750.0020
LEU 4760.0020
LYS 4770.0019
MET 4780.0021
ALA 4790.0023
GLY 4800.0024
ASN 4810.0024
SER 4820.0024
PHE 4830.0024
GLN 4840.0025
GLU 4850.0026
ASN 4860.0025
PHE 4870.0023
LEU 4880.0023
PRO 4890.0023
ASP 4900.0023
ILE 4910.0023
PHE 4920.0023
THR 4930.0024
GLU 4940.0023
LEU 4950.0023
ARG 4960.0024
ASN 4970.0024
LEU 4980.0024
THR 4990.0024
PHE 5000.0024
LEU 5010.0024
ASP 5020.0022
LEU 5030.0023
SER 5040.0025
GLN 5050.0028
CYS 5060.0027
GLN 5070.0026
LEU 5080.0024
GLU 5090.0022
GLN 5100.0021
LEU 5110.0021
SER 5120.0020
PRO 5130.0019
THR 5140.0020
ALA 5150.0022
PHE 5160.0022
ASN 5170.0022
SER 5180.0024
LEU 5190.0024
SER 5200.0025
SER 5210.0026
LEU 5220.0026
GLN 5230.0027
VAL 5240.0027
LEU 5250.0025
ASN 5260.0026
MET 5270.0024
SER 5280.0027
HIS 5290.0028
ASN 5300.0025
ASN 5310.0022
PHE 5320.0017
PHE 5330.0013
SER 5340.0013
LEU 5350.0016
ASP 5360.0013
THR 5370.0017
PHE 5380.0015
PRO 5390.0018
TYR 5400.0021
LYS 5410.0019
CYS 5420.0021
LEU 5430.0024
ASN 5440.0025
SER 5450.0028
LEU 5460.0027
GLN 5470.0030
VAL 5480.0030
LEU 5490.0027
ASP 5500.0028
TYR 5510.0025
SER 5520.0029
LEU 5530.0027
ASN 5540.0022
HIS 5550.0017
ILE 5560.0016
MET 5570.0016
THR 5580.0015
SER 5590.0014
LYS 5600.0011
LYS 5610.0010
GLN 5620.0013
GLU 5630.0012
LEU 5640.0017
GLN 5650.0019
HIS 5660.0018
PHE 5670.0021
PRO 5680.0023
SER 5690.0025
SER 5700.0028
LEU 5710.0028
ALA 5720.0034
PHE 5730.0035
LEU 5740.0030
ASN 5750.0032
LEU 5760.0028
THR 5770.0033
GLN 5780.0030
ASN 5790.0024
ASP 5800.0020
PHE 5810.0022
ALA 5820.0022
CYS 5830.0030
THR 5840.0031
CYS 5850.0035
GLU 5860.0029
HIS 5870.0025
GLN 5880.0031
SER 5890.0028
PHE 5900.0024
LEU 5910.0030
GLN 5920.0034
TRP 5930.0029
ILE 5940.0032
LYS 5950.0039
ASP 5960.0037
GLN 5970.0035
ARG 5980.0039
GLN 5990.0042
LEU 6000.0037
LEU 6010.0036
VAL 6020.0042
GLU 6030.0045
VAL 6040.0043
GLU 6050.0046
ARG 6060.0041
MET 6070.0036
GLU 6080.0035
CYS 6090.0030
ALA 6100.0025
THR 6110.0022
PRO 6120.0029
SER 6130.0030
ASP 6140.0038
LYS 6150.0038
GLN 6160.0033
GLY 6170.0038
MET 6180.0042
PRO 6190.0042
VAL 6200.0037
LEU 6210.0043
SER 6220.0049
LEU 6230.0044
ASN 6240.0049
ILE 6250.0045
THR 6260.0050
CYS 6270.0050
GLU 10.0093
ALA 20.0044
ALA 30.0042
ALA 40.0066
LYS 50.0047
MET 60.0054
GLN 70.0062
ARG 80.0031
LEU 90.0051
VAL 100.0085
LEU 110.0052
LEU 120.0016
LEU 130.0074
ALA 140.0081
ILE 150.0030
SER 160.0040
LEU 170.0065
LEU 180.0050
LEU 190.0013
TYR 200.0043
GLN 210.0050
ASP 220.0031
LEU 230.0013
PRO 240.0019
VAL 250.0045
ARG 260.0020
SER 270.0015
GLU 280.0021
PHE 290.0021
GLU 300.0016
LEU 310.0016
ASP 320.0021
ARG 330.0022
ILE 340.0021
CYS 350.0025
GLY 360.0022
TYR 370.0019
GLY 380.0020
THR 390.0025
ALA 400.0026
ARG 410.0029
CYS 420.0033
ARG 430.0036
LYS 440.0042
LYS 450.0045
CYS 460.0043
ARG 470.0040
SER 480.0041
GLN 490.0036
GLU 500.0038
TYR 510.0042
ARG 520.0045
ILE 530.0044
GLY 540.0046
ARG 550.0045
CYS 560.0038
PRO 570.0037
ASN 580.0038
THR 590.0045
TYR 600.0043
ALA 610.0042
CYS 620.0038
CYS 630.0037
LEU 640.0035
ARG 650.0034
LYS 660.0036
TRP 670.0033
ASP 680.0030
GLU 690.0028
SER 700.0025
LEU 710.0025
LEU 720.0027
ASN 730.0024
ARG 740.0021
THR 750.0023
LYS 760.0022
PRO 770.0020
GLU 780.0017
ALA 790.0022
ALA 800.0025
ALA 810.0051
LYS 820.0055
LYS 830.0055
GLU 840.0051
MET 850.0056
ASN 860.0044
LEU 870.0043
SER 880.0035
VAL 890.0030
GLY 900.0028
LEU 910.0019
GLY 920.0026
GLY 930.0030
GLY 940.0029
SER 950.0016
ASN 960.0016
LEU 970.0017
SER 980.0025
VAL 990.0036
GLY 1000.0043
LEU 1010.0056
GLY 1020.0065
GLU 1030.0083
ILE 1040.0097
GLY 1050.0115
GLY 1060.0139
GLY 1070.0121
SER 1080.0106
LYS 1090.0086
LEU 1100.0071
LEU 1110.0058
ASP 1120.0050
ILE 1130.0038
ASN 1140.0033
LEU 1150.0022
GLY 1160.0015
ARG 1170.0008
GLY 1180.0003
GLY 1190.0012
GLY 1200.0022
SER 1210.0024
MET 1220.0035
VAL 1230.0036
ASP 1240.0045
LEU 1250.0049
THR 1260.0049
PHE 1270.0052
GLY 1280.0048
GLY 1290.0055
VAL 1300.0057
GLY 1310.0041
GLY 1320.0048
GLY 1330.0055
SER 1340.0065
THR 1350.0074
PHE 1360.0085
THR 1370.0097
PHE 1380.0092
PHE 1390.0102
PRO 1400.0100
LEU 1410.0088
VAL 1420.0084
ILE 1430.0049
GLY 1440.0044
GLY 1450.0020
GLY 1460.0020
SER 1470.0024
ASP 1480.0019
ALA 1490.0032
MET 1500.0040
TYR 1510.0042
LEU 1520.0054
GLY 1530.0071
PHE 1540.0083
ALA 1550.0100
ALA 1560.0084
GLY 1570.0081
GLY 1580.0068
GLY 1590.0066
SER 1600.0057
ALA 1610.0070
GLY 1620.0063
GLY 1630.0064
GLU 1640.0063
ASN 1650.0070
HIS 1660.0065
VAL 1670.0065
ALA 1680.0061
PHE 1690.0056
GLY 1700.0057
PRO 1710.0042
GLY 1720.0061
PRO 1730.0077
GLY 1740.0090
VAL 1750.0084
ASP 1760.0094
LEU 1770.0097
THR 1780.0095
PHE 1790.0101
GLY 1800.0103
GLY 1810.0124
VAL 1820.0143
GLN 1830.0138
PHE 1840.0147
ALA 1850.0153
MET 1860.0158
VAL 1870.0191
ASN 1880.0182
ASN 1890.0253
GLY 1900.0254
PRO 1910.0299
GLY 1920.0434
PRO 1930.0389
GLY 1940.0249
GLU 1950.0201
SER 1960.0203
PHE 1970.0243
THR 1980.0221
ALA 1990.0334
GLN 2000.0371
PRO 2010.0366
ALA 2020.0262
ASP 2030.0264
MET 2040.0266
GLN 2050.0163
ALA 2060.0331
GLY 2070.0402
ILE 2080.0389
LYS 2090.0562
GLY 2100.0436
PRO 2110.0408
GLY 2120.0607
PRO 2130.0720
GLY 2140.0481
GLY 2150.0360
SER 2160.0500
ILE 2170.0464
GLN 2180.0435
VAL 2190.0396
ILE 2200.0390
ASN 2210.0262
GLY 2220.0229
SER 2230.0272
THR 2240.0303
ILE 2250.0406
GLY 2260.0591
THR 2270.0639
GLY 2280.0570
SER 2290.0521
LYS 2300.0381
LYS 2310.0343
THR 2320.0242
ILE 2330.0202
LEU 2340.0127
ILE 2350.0057
TYR 2360.0039
SER 2370.0026
ILE 2380.0023
ILE 2390.0033
GLY 2400.0028
VAL 2410.0017
LYS 2420.0017
LYS 2430.0017
GLY 2440.0017
THR 2450.0017
LEU 2460.0022
ALA 2470.0055
TRP 2480.0073
ALA 2490.0094
ARG 2500.0115
THR 2510.0127
GLY 2520.0123
PHE 2530.0066
SER 2540.0055
PRO 2550.0102
ALA 2560.0174
LYS 2570.0282
LYS 2580.0292
LEU 2590.0263
ASN 2600.0299
ALA 2610.0071
GLY 2620.0064
VAL 2630.0031
VAL 2640.0068
ARG 2650.0035
VAL 2660.0041
PHE 2670.0062
PHE 2680.0047
LEU 2690.0090
ASN 2700.0096
GLN 2710.0075
LYS 2720.0055
LYS 2730.0108
ALA 2740.0132
LYS 2750.0120
ASP 2760.0208
VAL 2770.0320
LEU 2780.0352
ARG 2790.0368
LYS 2800.0448
THR 2810.0657
SER 2820.0749
ARG 2830.0631
PRO 2840.0695
MET 2850.0692
VAL 2860.0584
ASP 2870.0579
LEU 2880.0598
THR 2890.0577
PHE 2900.0545
GLY 2910.0551
GLY 2920.0586

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.