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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0754
GLU 270.0062
PRO 280.0066
CYS 290.0067
VAL 300.0086
GLU 310.0094
VAL 320.0100
VAL 330.0105
PRO 340.0108
ASN 350.0098
ILE 360.0090
THR 370.0080
TYR 380.0071
GLN 390.0070
CYS 400.0055
MET 410.0061
GLU 420.0066
LEU 430.0059
ASN 440.0051
PHE 450.0033
TYR 460.0030
LYS 470.0015
ILE 480.0014
PRO 490.0029
ASP 500.0039
ASN 510.0053
LEU 520.0062
PRO 530.0078
PHE 540.0077
SER 550.0084
THR 560.0070
LYS 570.0067
ASN 580.0060
LEU 590.0047
ASP 600.0047
LEU 610.0036
SER 620.0045
PHE 630.0055
ASN 640.0045
PRO 650.0046
LEU 660.0032
ARG 670.0044
HIS 680.0039
LEU 690.0029
GLY 700.0039
SER 710.0046
TYR 720.0043
SER 730.0027
PHE 740.0031
PHE 750.0047
SER 760.0049
PHE 770.0051
PRO 780.0062
GLU 790.0066
LEU 800.0050
GLN 810.0048
VAL 820.0039
LEU 830.0027
ASP 840.0029
LEU 850.0024
SER 860.0038
ARG 870.0047
CYS 880.0040
GLU 890.0050
ILE 900.0041
GLN 910.0053
THR 920.0049
ILE 930.0038
GLU 940.0047
ASP 950.0053
GLY 960.0047
ALA 970.0034
TYR 980.0031
GLN 990.0046
SER 1000.0050
LEU 1010.0043
SER 1020.0050
HIS 1030.0049
LEU 1040.0034
SER 1050.0032
THR 1060.0024
LEU 1070.0012
ILE 1080.0017
LEU 1090.0021
THR 1100.0032
GLY 1110.0042
ASN 1120.0041
PRO 1130.0053
ILE 1140.0047
GLN 1150.0060
SER 1160.0057
LEU 1170.0047
ALA 1180.0053
LEU 1190.0053
GLY 1200.0050
ALA 1210.0038
PHE 1220.0032
SER 1230.0043
GLY 1240.0044
LEU 1250.0034
SER 1260.0043
SER 1270.0034
LEU 1280.0023
GLN 1290.0020
LYS 1300.0014
LEU 1310.0010
VAL 1320.0013
ALA 1330.0019
VAL 1340.0024
GLU 1350.0032
THR 1360.0032
ASN 1370.0036
LEU 1380.0030
ALA 1390.0033
SER 1400.0030
LEU 1410.0024
GLU 1420.0031
ASN 1430.0035
PHE 1440.0029
PRO 1450.0032
ILE 1460.0026
GLY 1470.0030
HIS 1480.0033
LEU 1490.0027
LYS 1500.0030
THR 1510.0027
LEU 1520.0016
LYS 1530.0013
GLU 1540.0009
LEU 1550.0009
ASN 1560.0011
VAL 1570.0015
ALA 1580.0017
HIS 1590.0022
ASN 1600.0023
LEU 1610.0026
ILE 1620.0018
GLN 1630.0018
SER 1640.0015
PHE 1650.0011
LYS 1660.0014
LEU 1670.0017
PRO 1680.0023
GLU 1690.0027
TYR 1700.0028
PHE 1710.0022
SER 1720.0024
ASN 1730.0027
LEU 1740.0021
THR 1750.0023
ASN 1760.0021
LEU 1770.0013
GLU 1780.0010
HIS 1790.0006
LEU 1800.0006
ASP 1810.0008
LEU 1820.0009
SER 1830.0011
SER 1840.0016
ASN 1850.0015
LYS 1860.0015
ILE 1870.0008
GLN 1880.0005
SER 1890.0001
ILE 1900.0003
TYR 1910.0008
CYS 1920.0010
THR 1930.0013
ASP 1940.0011
LEU 1950.0012
ARG 1960.0017
VAL 1970.0018
LEU 1980.0015
HIS 1990.0018
GLN 2000.0022
MET 2010.0021
PRO 2020.0019
LEU 2030.0020
LEU 2040.0016
ASN 2050.0013
LEU 2060.0009
SER 2070.0005
LEU 2080.0004
ASP 2090.0005
LEU 2100.0005
SER 2110.0010
LEU 2120.0014
ASN 2130.0009
PRO 2140.0010
MET 2150.0007
ASN 2160.0009
PHE 2170.0008
ILE 2180.0009
GLN 2190.0011
PRO 2200.0016
GLY 2210.0018
ALA 2220.0013
PHE 2230.0013
LYS 2240.0018
GLU 2250.0020
ILE 2260.0015
ARG 2270.0013
LEU 2280.0009
HIS 2290.0007
LYS 2300.0003
LEU 2310.0003
THR 2320.0007
LEU 2330.0009
ARG 2340.0014
ASN 2350.0018
ASN 2360.0014
PHE 2370.0020
ASP 2380.0025
SER 2390.0029
LEU 2400.0031
ASN 2410.0031
VAL 2420.0023
MET 2430.0021
LYS 2440.0025
THR 2450.0023
CYS 2460.0017
ILE 2470.0017
GLN 2480.0021
GLY 2490.0017
LEU 2500.0015
ALA 2510.0021
GLY 2520.0021
LEU 2530.0015
GLU 2540.0014
VAL 2550.0008
HIS 2560.0006
ARG 2570.0003
LEU 2580.0007
VAL 2590.0011
LEU 2600.0016
GLY 2610.0021
GLU 2620.0023
PHE 2630.0027
ARG 2640.0034
ASN 2650.0032
GLU 2660.0026
GLY 2670.0030
ASN 2680.0031
LEU 2690.0031
GLU 2700.0038
LYS 2710.0039
PHE 2720.0039
ASP 2730.0042
LYS 2740.0040
SER 2750.0038
ALA 2760.0032
LEU 2770.0028
GLU 2780.0032
GLY 2790.0027
LEU 2800.0022
CYS 2810.0027
ASN 2820.0026
LEU 2830.0019
THR 2840.0017
ILE 2850.0011
GLU 2860.0007
GLU 2870.0005
PHE 2880.0011
ARG 2890.0016
LEU 2900.0022
ALA 2910.0025
TYR 2920.0032
LEU 2930.0035
ASP 2940.0039
TYR 2950.0042
TYR 2960.0047
LEU 2970.0050
ASP 2980.0056
GLY 2990.0049
ILE 3000.0040
ILE 3010.0044
ASP 3020.0041
LEU 3030.0037
PHE 3040.0029
ASN 3050.0031
CYS 3060.0028
LEU 3070.0020
THR 3080.0020
ASN 3090.0016
VAL 3100.0011
SER 3110.0006
SER 3120.0006
PHE 3130.0013
SER 3140.0018
LEU 3150.0026
VAL 3160.0030
SER 3170.0039
VAL 3180.0040
THR 3190.0048
ILE 3200.0048
GLU 3210.0056
ARG 3220.0054
VAL 3230.0044
LYS 3240.0044
ASP 3250.0040
PHE 3260.0030
SER 3270.0028
TYR 3280.0028
ASN 3290.0022
PHE 3300.0019
GLY 3310.0014
TRP 3320.0008
GLN 3330.0008
HIS 3340.0011
LEU 3350.0015
GLU 3360.0021
LEU 3370.0028
VAL 3380.0035
ASN 3390.0044
CYS 3400.0043
LYS 3410.0050
PHE 3420.0052
GLY 3430.0062
GLN 3440.0055
PHE 3450.0043
PRO 3460.0034
THR 3470.0030
LEU 3480.0022
LYS 3490.0016
LEU 3500.0011
LYS 3510.0011
SER 3520.0012
LEU 3530.0012
LYS 3540.0019
ARG 3550.0021
LEU 3560.0023
THR 3570.0028
PHE 3580.0032
THR 3590.0041
SER 3600.0049
ASN 3610.0047
LYS 3620.0057
GLY 3630.0061
GLY 3640.0060
ASN 3650.0052
ALA 3660.0051
PHE 3670.0037
SER 3680.0031
GLU 3690.0025
VAL 3700.0020
ASP 3710.0015
LEU 3720.0018
PRO 3730.0020
SER 3740.0022
LEU 3750.0024
GLU 3760.0031
PHE 3770.0033
LEU 3780.0034
ASP 3790.0039
LEU 3800.0041
SER 3810.0048
ARG 3820.0056
ASN 3830.0052
GLY 3840.0060
LEU 3850.0051
SER 3860.0051
PHE 3870.0044
LYS 3880.0041
GLY 3890.0041
CYS 3900.0044
CYS 3910.0043
SER 3920.0040
GLN 3930.0035
SER 3940.0030
ASP 3950.0030
PHE 3960.0027
GLY 3970.0026
THR 3980.0030
ILE 3990.0039
SER 4000.0038
LEU 4010.0038
LYS 4020.0043
TYR 4030.0045
LEU 4040.0045
ASP 4050.0048
LEU 4060.0049
SER 4070.0055
PHE 4080.0058
ASN 4090.0055
GLY 4100.0058
VAL 4110.0058
ILE 4120.0053
THR 4130.0052
MET 4140.0053
SER 4150.0050
SER 4160.0050
ASN 4170.0055
PHE 4180.0050
LEU 4190.0049
GLY 4200.0046
LEU 4210.0046
GLU 4220.0051
GLN 4230.0049
LEU 4240.0050
GLU 4250.0054
HIS 4260.0055
LEU 4270.0053
ASP 4280.0055
PHE 4290.0055
GLN 4300.0059
HIS 4310.0059
SER 4320.0058
ASN 4330.0059
LEU 4340.0058
LYS 4350.0058
GLN 4360.0059
MET 4370.0064
SER 4380.0068
GLU 4390.0066
PHE 4400.0066
SER 4410.0066
VAL 4420.0060
PHE 4430.0060
LEU 4440.0062
SER 4450.0058
LEU 4460.0058
ARG 4470.0060
ASN 4480.0059
LEU 4490.0060
ILE 4500.0064
TYR 4510.0065
LEU 4520.0063
ASP 4530.0063
ILE 4540.0062
SER 4550.0063
HIS 4560.0063
THR 4570.0060
HIS 4580.0062
THR 4590.0063
ARG 4600.0068
VAL 4610.0070
ALA 4620.0072
PHE 4630.0071
ASN 4640.0071
GLY 4650.0069
ILE 4660.0068
PHE 4670.0067
ASN 4680.0067
GLY 4690.0066
LEU 4700.0067
SER 4710.0068
SER 4720.0070
LEU 4730.0070
GLU 4740.0074
VAL 4750.0073
LEU 4760.0071
LYS 4770.0070
MET 4780.0069
ALA 4790.0069
GLY 4800.0069
ASN 4810.0069
SER 4820.0072
PHE 4830.0069
GLN 4840.0070
GLU 4850.0067
ASN 4860.0065
PHE 4870.0062
LEU 4880.0062
PRO 4890.0062
ASP 4900.0062
ILE 4910.0066
PHE 4920.0067
THR 4930.0067
GLU 4940.0068
LEU 4950.0069
ARG 4960.0071
ASN 4970.0078
LEU 4980.0076
THR 4990.0079
PHE 5000.0077
LEU 5010.0074
ASP 5020.0070
LEU 5030.0068
SER 5040.0068
GLN 5050.0071
CYS 5060.0071
GLN 5070.0069
LEU 5080.0063
GLU 5090.0056
GLN 5100.0051
LEU 5110.0052
SER 5120.0052
PRO 5130.0049
THR 5140.0055
ALA 5150.0060
PHE 5160.0063
ASN 5170.0062
SER 5180.0070
LEU 5190.0073
SER 5200.0076
SER 5210.0082
LEU 5220.0080
GLN 5230.0081
VAL 5240.0078
LEU 5250.0072
ASN 5260.0073
MET 5270.0067
SER 5280.0071
HIS 5290.0076
ASN 5300.0069
ASN 5310.0064
PHE 5320.0053
PHE 5330.0052
SER 5340.0039
LEU 5350.0033
ASP 5360.0028
THR 5370.0036
PHE 5380.0041
PRO 5390.0048
TYR 5400.0053
LYS 5410.0058
CYS 5420.0068
LEU 5430.0070
ASN 5440.0079
SER 5450.0084
LEU 5460.0074
GLN 5470.0078
VAL 5480.0075
LEU 5490.0065
ASP 5500.0070
TYR 5510.0062
SER 5520.0076
LEU 5530.0087
ASN 5540.0073
HIS 5550.0071
ILE 5560.0055
MET 5570.0068
THR 5580.0056
SER 5590.0041
LYS 5600.0045
LYS 5610.0041
GLN 5620.0048
GLU 5630.0042
LEU 5640.0032
GLN 5650.0041
HIS 5660.0048
PHE 5670.0047
PRO 5680.0063
SER 5690.0069
SER 5700.0076
LEU 5710.0063
ALA 5720.0065
PHE 5730.0067
LEU 5740.0055
ASN 5750.0069
LEU 5760.0063
THR 5770.0086
GLN 5780.0103
ASN 5790.0087
ASP 5800.0095
PHE 5810.0086
ALA 5820.0111
CYS 5830.0121
THR 5840.0135
CYS 5850.0138
GLU 5860.0126
HIS 5870.0097
GLN 5880.0103
SER 5890.0084
PHE 5900.0061
LEU 5910.0077
GLN 5920.0076
TRP 5930.0051
ILE 5940.0050
LYS 5950.0057
ASP 5960.0045
GLN 5970.0029
ARG 5980.0039
GLN 5990.0037
LEU 6000.0044
LEU 6010.0053
VAL 6020.0077
GLU 6030.0094
VAL 6040.0083
GLU 6050.0110
ARG 6060.0115
MET 6070.0099
GLU 6080.0120
CYS 6090.0125
ALA 6100.0137
THR 6110.0142
PRO 6120.0168
SER 6130.0193
ASP 6140.0203
LYS 6150.0172
GLN 6160.0170
GLY 6170.0163
MET 6180.0148
PRO 6190.0121
VAL 6200.0101
LEU 6210.0088
SER 6220.0118
LEU 6230.0128
ASN 6240.0144
ILE 6250.0133
THR 6260.0162
CYS 6270.0195
GLU 10.0084
ALA 20.0094
ALA 30.0054
ALA 40.0036
LYS 50.0056
MET 60.0064
GLN 70.0063
ARG 80.0047
LEU 90.0030
VAL 100.0080
LEU 110.0081
LEU 120.0038
LEU 130.0042
ALA 140.0092
ILE 150.0085
SER 160.0041
LEU 170.0063
LEU 180.0085
LEU 190.0065
TYR 200.0043
GLN 210.0066
ASP 220.0069
LEU 230.0046
PRO 240.0046
VAL 250.0042
ARG 260.0040
SER 270.0032
GLU 280.0037
PHE 290.0033
GLU 300.0023
LEU 310.0025
ASP 320.0029
ARG 330.0023
ILE 340.0021
CYS 350.0026
GLY 360.0032
TYR 370.0032
GLY 380.0020
THR 390.0018
ALA 400.0019
ARG 410.0017
CYS 420.0024
ARG 430.0025
LYS 440.0032
LYS 450.0028
CYS 460.0016
ARG 470.0012
SER 480.0010
GLN 490.0004
GLU 500.0007
TYR 510.0013
ARG 520.0022
ILE 530.0027
GLY 540.0034
ARG 550.0038
CYS 560.0036
PRO 570.0043
ASN 580.0043
THR 590.0044
TYR 600.0037
ALA 610.0029
CYS 620.0024
CYS 630.0018
LEU 640.0014
ARG 650.0007
LYS 660.0007
TRP 670.0012
ASP 680.0011
GLU 690.0016
SER 700.0015
LEU 710.0020
LEU 720.0027
ASN 730.0025
ARG 740.0021
THR 750.0026
LYS 760.0028
PRO 770.0024
GLU 780.0020
ALA 790.0022
ALA 800.0025
ALA 810.0068
LYS 820.0062
LYS 830.0064
GLU 840.0060
MET 850.0060
ASN 860.0065
LEU 870.0053
SER 880.0072
VAL 890.0072
GLY 900.0094
LEU 910.0114
GLY 920.0140
GLY 930.0175
GLY 940.0170
SER 950.0149
ASN 960.0116
LEU 970.0093
SER 980.0077
VAL 990.0051
GLY 1000.0047
LEU 1010.0038
GLY 1020.0035
GLU 1030.0042
ILE 1040.0040
GLY 1050.0060
GLY 1060.0093
GLY 1070.0087
SER 1080.0087
LYS 1090.0070
LEU 1100.0069
LEU 1110.0020
ASP 1120.0044
ILE 1130.0054
ASN 1140.0090
LEU 1150.0098
GLY 1160.0117
ARG 1170.0126
GLY 1180.0128
GLY 1190.0123
GLY 1200.0116
SER 1210.0101
MET 1220.0085
VAL 1230.0070
ASP 1240.0064
LEU 1250.0049
THR 1260.0054
PHE 1270.0052
GLY 1280.0059
GLY 1290.0061
VAL 1300.0064
GLY 1310.0067
GLY 1320.0068
GLY 1330.0066
SER 1340.0065
THR 1350.0063
PHE 1360.0055
THR 1370.0056
PHE 1380.0044
PHE 1390.0050
PRO 1400.0044
LEU 1410.0046
VAL 1420.0072
ILE 1430.0061
GLY 1440.0078
GLY 1450.0097
GLY 1460.0086
SER 1470.0082
ASP 1480.0074
ALA 1490.0064
MET 1500.0046
TYR 1510.0028
LEU 1520.0012
GLY 1530.0017
PHE 1540.0047
ALA 1550.0058
ALA 1560.0073
GLY 1570.0069
GLY 1580.0060
GLY 1590.0062
SER 1600.0061
ALA 1610.0068
GLY 1620.0064
GLY 1630.0057
GLU 1640.0055
ASN 1650.0051
HIS 1660.0050
VAL 1670.0044
ALA 1680.0053
PHE 1690.0058
GLY 1700.0069
PRO 1710.0117
GLY 1720.0119
PRO 1730.0115
GLY 1740.0087
VAL 1750.0062
ASP 1760.0054
LEU 1770.0046
THR 1780.0046
PHE 1790.0046
GLY 1800.0051
GLY 1810.0052
VAL 1820.0047
GLN 1830.0052
PHE 1840.0056
ALA 1850.0068
MET 1860.0079
VAL 1870.0118
ASN 1880.0145
ASN 1890.0176
GLY 1900.0201
PRO 1910.0186
GLY 1920.0160
PRO 1930.0117
GLY 1940.0099
GLU 1950.0108
SER 1960.0221
PHE 1970.0193
THR 1980.0228
ALA 1990.0253
GLN 2000.0240
PRO 2010.0219
ALA 2020.0118
ASP 2030.0148
MET 2040.0229
GLN 2050.0223
ALA 2060.0348
GLY 2070.0323
ILE 2080.0304
LYS 2090.0416
GLY 2100.0219
PRO 2110.0291
GLY 2120.0343
PRO 2130.0352
GLY 2140.0254
GLY 2150.0233
SER 2160.0230
ILE 2170.0202
GLN 2180.0088
VAL 2190.0076
ILE 2200.0192
ASN 2210.0210
GLY 2220.0197
SER 2230.0309
THR 2240.0333
ILE 2250.0325
GLY 2260.0420
THR 2270.0381
GLY 2280.0207
SER 2290.0209
LYS 2300.0112
LYS 2310.0100
THR 2320.0063
ILE 2330.0045
LEU 2340.0133
ILE 2350.0109
TYR 2360.0146
SER 2370.0110
ILE 2380.0091
ILE 2390.0129
GLY 2400.0091
VAL 2410.0110
LYS 2420.0104
LYS 2430.0105
GLY 2440.0134
THR 2450.0145
LEU 2460.0251
ALA 2470.0280
TRP 2480.0300
ALA 2490.0321
ARG 2500.0340
THR 2510.0364
GLY 2520.0410
PHE 2530.0362
SER 2540.0460
PRO 2550.0421
ALA 2560.0564
LYS 2570.0663
LYS 2580.0645
LEU 2590.0677
ASN 2600.0750
ALA 2610.0630
GLY 2620.0478
VAL 2630.0413
VAL 2640.0256
ARG 2650.0197
VAL 2660.0117
PHE 2670.0084
PHE 2680.0050
LEU 2690.0033
ASN 2700.0063
GLN 2710.0057
LYS 2720.0053
LYS 2730.0047
ALA 2740.0050
LYS 2750.0051
ASP 2760.0060
VAL 2770.0076
LEU 2780.0099
ARG 2790.0110
LYS 2800.0151
THR 2810.0265
SER 2820.0434
ARG 2830.0353
PRO 2840.0509
MET 2850.0656
VAL 2860.0507
ASP 2870.0362
LEU 2880.0504
THR 2890.0387
PHE 2900.0351
GLY 2910.0739
GLY 2920.0754

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.