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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 37  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0878
GLU 270.0039
PRO 280.0067
CYS 290.0070
VAL 300.0101
GLU 310.0109
VAL 320.0131
VAL 330.0140
PRO 340.0133
ASN 350.0120
ILE 360.0117
THR 370.0102
TYR 380.0081
GLN 390.0087
CYS 400.0065
MET 410.0090
GLU 420.0109
LEU 430.0097
ASN 440.0103
PHE 450.0073
TYR 460.0090
LYS 470.0063
ILE 480.0030
PRO 490.0009
ASP 500.0034
ASN 510.0030
LEU 520.0050
PRO 530.0083
PHE 540.0094
SER 550.0108
THR 560.0083
LYS 570.0089
ASN 580.0078
LEU 590.0052
ASP 600.0060
LEU 610.0048
SER 620.0074
PHE 630.0097
ASN 640.0086
PRO 650.0100
LEU 660.0077
ARG 670.0092
HIS 680.0084
LEU 690.0065
GLY 700.0083
SER 710.0087
TYR 720.0077
SER 730.0055
PHE 740.0044
PHE 750.0072
SER 760.0063
PHE 770.0063
PRO 780.0088
GLU 790.0092
LEU 800.0065
GLN 810.0070
VAL 820.0054
LEU 830.0029
ASP 840.0041
LEU 850.0040
SER 860.0066
ARG 870.0085
CYS 880.0075
GLU 890.0095
ILE 900.0078
GLN 910.0094
THR 920.0088
ILE 930.0069
GLU 940.0083
ASP 950.0087
GLY 960.0076
ALA 970.0060
TYR 980.0047
GLN 990.0073
SER 1000.0076
LEU 1010.0061
SER 1020.0075
HIS 1030.0074
LEU 1040.0049
SER 1050.0051
THR 1060.0038
LEU 1070.0016
ILE 1080.0030
LEU 1090.0036
THR 1100.0055
GLY 1110.0072
ASN 1120.0071
PRO 1130.0086
ILE 1140.0073
GLN 1150.0090
SER 1160.0086
LEU 1170.0071
ALA 1180.0077
LEU 1190.0069
GLY 1200.0070
ALA 1210.0055
PHE 1220.0040
SER 1230.0059
GLY 1240.0062
LEU 1250.0045
SER 1260.0061
SER 1270.0048
LEU 1280.0031
GLN 1290.0033
LYS 1300.0027
LEU 1310.0014
VAL 1320.0026
ALA 1330.0029
VAL 1340.0041
GLU 1350.0050
THR 1360.0044
ASN 1370.0051
LEU 1380.0040
ALA 1390.0040
SER 1400.0029
LEU 1410.0019
GLU 1420.0023
ASN 1430.0032
PHE 1440.0024
PRO 1450.0023
ILE 1460.0013
GLY 1470.0016
HIS 1480.0027
LEU 1490.0022
LYS 1500.0029
THR 1510.0034
LEU 1520.0018
LYS 1530.0028
GLU 1540.0025
LEU 1550.0021
ASN 1560.0027
VAL 1570.0030
ALA 1580.0037
HIS 1590.0042
ASN 1600.0040
LEU 1610.0042
ILE 1620.0037
GLN 1630.0041
SER 1640.0039
PHE 1650.0038
LYS 1660.0035
LEU 1670.0027
PRO 1680.0018
GLU 1690.0013
TYR 1700.0008
PHE 1710.0016
SER 1720.0017
ASN 1730.0015
LEU 1740.0017
THR 1750.0028
ASN 1760.0031
LEU 1770.0026
GLU 1780.0032
HIS 1790.0029
LEU 1800.0029
ASP 1810.0031
LEU 1820.0033
SER 1830.0038
SER 1840.0042
ASN 1850.0040
LYS 1860.0044
ILE 1870.0046
GLN 1880.0052
SER 1890.0054
ILE 1900.0052
TYR 1910.0056
CYS 1920.0056
THR 1930.0051
ASP 1940.0045
LEU 1950.0045
ARG 1960.0046
VAL 1970.0036
LEU 1980.0041
HIS 1990.0050
GLN 2000.0046
MET 2010.0043
PRO 2020.0050
LEU 2030.0047
LEU 2040.0040
ASN 2050.0038
LEU 2060.0034
SER 2070.0033
LEU 2080.0033
ASP 2090.0032
LEU 2100.0038
SER 2110.0040
LEU 2120.0043
ASN 2130.0045
PRO 2140.0051
MET 2150.0053
ASN 2160.0059
PHE 2170.0061
ILE 2180.0059
GLN 2190.0064
PRO 2200.0068
GLY 2210.0067
ALA 2220.0060
PHE 2230.0056
LYS 2240.0064
GLU 2250.0062
ILE 2260.0053
ARG 2270.0049
LEU 2280.0041
HIS 2290.0037
LYS 2300.0032
LEU 2310.0034
THR 2320.0032
LEU 2330.0037
ARG 2340.0036
ASN 2350.0042
ASN 2360.0046
PHE 2370.0053
ASP 2380.0058
SER 2390.0060
LEU 2400.0059
ASN 2410.0065
VAL 2420.0062
MET 2430.0055
LYS 2440.0060
THR 2450.0064
CYS 2460.0058
ILE 2470.0055
GLN 2480.0063
GLY 2490.0061
LEU 2500.0055
ALA 2510.0061
GLY 2520.0063
LEU 2530.0053
GLU 2540.0049
VAL 2550.0039
HIS 2560.0035
ARG 2570.0028
LEU 2580.0030
VAL 2590.0026
LEU 2600.0032
GLY 2610.0035
GLU 2620.0038
PHE 2630.0038
ARG 2640.0042
ASN 2650.0043
GLU 2660.0044
GLY 2670.0052
ASN 2680.0049
LEU 2690.0051
GLU 2700.0057
LYS 2710.0055
PHE 2720.0049
ASP 2730.0051
LYS 2740.0049
SER 2750.0053
ALA 2760.0049
LEU 2770.0046
GLU 2780.0054
GLY 2790.0054
LEU 2800.0046
CYS 2810.0052
ASN 2820.0058
LEU 2830.0050
THR 2840.0047
ILE 2850.0037
GLU 2860.0033
GLU 2870.0023
PHE 2880.0023
ARG 2890.0020
LEU 2900.0025
ALA 2910.0025
TYR 2920.0034
LEU 2930.0037
ASP 2940.0040
TYR 2950.0042
TYR 2960.0039
LEU 2970.0034
ASP 2980.0035
GLY 2990.0031
ILE 3000.0029
ILE 3010.0031
ASP 3020.0038
LEU 3030.0036
PHE 3040.0031
ASN 3050.0035
CYS 3060.0037
LEU 3070.0027
THR 3080.0028
ASN 3090.0028
VAL 3100.0023
SER 3110.0021
SER 3120.0014
PHE 3130.0013
SER 3140.0014
LEU 3150.0019
VAL 3160.0022
SER 3170.0027
VAL 3180.0028
THR 3190.0029
ILE 3200.0028
GLU 3210.0028
ARG 3220.0024
VAL 3230.0020
LYS 3240.0019
ASP 3250.0020
PHE 3260.0017
SER 3270.0015
TYR 3280.0017
ASN 3290.0017
PHE 3300.0016
GLY 3310.0017
TRP 3320.0010
GLN 3330.0011
HIS 3340.0010
LEU 3350.0010
GLU 3360.0015
LEU 3370.0020
VAL 3380.0023
ASN 3390.0027
CYS 3400.0026
LYS 3410.0028
PHE 3420.0025
GLY 3430.0024
GLN 3440.0024
PHE 3450.0024
PRO 3460.0025
THR 3470.0016
LEU 3480.0014
LYS 3490.0012
LEU 3500.0011
LYS 3510.0010
SER 3520.0006
LEU 3530.0009
LYS 3540.0014
ARG 3550.0018
LEU 3560.0019
THR 3570.0021
PHE 3580.0022
THR 3590.0027
SER 3600.0031
ASN 3610.0030
LYS 3620.0030
GLY 3630.0032
GLY 3640.0034
ASN 3650.0029
ALA 3660.0030
PHE 3670.0023
SER 3680.0021
GLU 3690.0018
VAL 3700.0019
ASP 3710.0017
LEU 3720.0017
PRO 3730.0015
SER 3740.0021
LEU 3750.0020
GLU 3760.0022
PHE 3770.0019
LEU 3780.0020
ASP 3790.0023
LEU 3800.0023
SER 3810.0026
ARG 3820.0030
ASN 3830.0029
GLY 3840.0026
LEU 3850.0023
SER 3860.0019
PHE 3870.0015
LYS 3880.0013
GLY 3890.0010
CYS 3900.0011
CYS 3910.0013
SER 3920.0010
GLN 3930.0012
SER 3940.0012
ASP 3950.0014
PHE 3960.0017
GLY 3970.0018
THR 3980.0021
ILE 3990.0026
SER 4000.0028
LEU 4010.0017
LYS 4020.0021
TYR 4030.0020
LEU 4040.0019
ASP 4050.0019
LEU 4060.0017
SER 4070.0022
PHE 4080.0023
ASN 4090.0020
GLY 4100.0016
VAL 4110.0012
ILE 4120.0012
THR 4130.0009
MET 4140.0009
SER 4150.0008
SER 4160.0009
ASN 4170.0011
PHE 4180.0012
LEU 4190.0010
GLY 4200.0012
LEU 4210.0015
GLU 4220.0020
GLN 4230.0023
LEU 4240.0020
GLU 4250.0021
HIS 4260.0019
LEU 4270.0017
ASP 4280.0019
PHE 4290.0017
GLN 4300.0021
HIS 4310.0021
SER 4320.0017
ASN 4330.0014
LEU 4340.0014
LYS 4350.0012
GLN 4360.0012
MET 4370.0017
SER 4380.0018
GLU 4390.0016
PHE 4400.0016
SER 4410.0017
VAL 4420.0015
PHE 4430.0016
LEU 4440.0015
SER 4450.0015
LEU 4460.0017
ARG 4470.0018
ASN 4480.0019
LEU 4490.0019
ILE 4500.0021
TYR 4510.0021
LEU 4520.0020
ASP 4530.0022
ILE 4540.0022
SER 4550.0025
HIS 4560.0025
THR 4570.0024
HIS 4580.0026
THR 4590.0025
ARG 4600.0027
VAL 4610.0027
ALA 4620.0027
PHE 4630.0025
ASN 4640.0026
GLY 4650.0023
ILE 4660.0022
PHE 4670.0023
ASN 4680.0022
GLY 4690.0020
LEU 4700.0021
SER 4710.0021
SER 4720.0020
LEU 4730.0021
GLU 4740.0021
VAL 4750.0022
LEU 4760.0024
LYS 4770.0025
MET 4780.0028
ALA 4790.0031
GLY 4800.0033
ASN 4810.0033
SER 4820.0036
PHE 4830.0037
GLN 4840.0039
GLU 4850.0042
ASN 4860.0041
PHE 4870.0039
LEU 4880.0035
PRO 4890.0035
ASP 4900.0032
ILE 4910.0031
PHE 4920.0027
THR 4930.0026
GLU 4940.0025
LEU 4950.0023
ARG 4960.0022
ASN 4970.0020
LEU 4980.0021
THR 4990.0019
PHE 5000.0022
LEU 5010.0025
ASP 5020.0027
LEU 5030.0031
SER 5040.0034
GLN 5050.0039
CYS 5060.0040
GLN 5070.0042
LEU 5080.0039
GLU 5090.0040
GLN 5100.0038
LEU 5110.0034
SER 5120.0034
PRO 5130.0030
THR 5140.0030
ALA 5150.0030
PHE 5160.0025
ASN 5170.0025
SER 5180.0024
LEU 5190.0022
SER 5200.0018
SER 5210.0016
LEU 5220.0018
GLN 5230.0015
VAL 5240.0019
LEU 5250.0022
ASN 5260.0027
MET 5270.0029
SER 5280.0032
HIS 5290.0040
ASN 5300.0040
ASN 5310.0041
PHE 5320.0034
PHE 5330.0031
SER 5340.0025
LEU 5350.0019
ASP 5360.0024
THR 5370.0017
PHE 5380.0024
PRO 5390.0025
TYR 5400.0018
LYS 5410.0018
CYS 5420.0019
LEU 5430.0015
ASN 5440.0011
SER 5450.0009
LEU 5460.0011
GLN 5470.0011
VAL 5480.0017
LEU 5490.0017
ASP 5500.0024
TYR 5510.0023
SER 5520.0029
LEU 5530.0036
ASN 5540.0033
HIS 5550.0031
ILE 5560.0022
MET 5570.0017
THR 5580.0019
SER 5590.0021
LYS 5600.0032
LYS 5610.0036
GLN 5620.0034
GLU 5630.0029
LEU 5640.0022
GLN 5650.0026
HIS 5660.0020
PHE 5670.0012
PRO 5680.0012
SER 5690.0013
SER 5700.0010
LEU 5710.0009
ALA 5720.0019
PHE 5730.0021
LEU 5740.0016
ASN 5750.0023
LEU 5760.0019
THR 5770.0030
GLN 5780.0033
ASN 5790.0025
ASP 5800.0023
PHE 5810.0013
ALA 5820.0011
CYS 5830.0013
THR 5840.0021
CYS 5850.0034
GLU 5860.0035
HIS 5870.0026
GLN 5880.0032
SER 5890.0034
PHE 5900.0022
LEU 5910.0022
GLN 5920.0033
TRP 5930.0028
ILE 5940.0023
LYS 5950.0035
ASP 5960.0038
GLN 5970.0031
ARG 5980.0034
GLN 5990.0037
LEU 6000.0027
LEU 6010.0026
VAL 6020.0036
GLU 6030.0043
VAL 6040.0038
GLU 6050.0045
ARG 6060.0042
MET 6070.0030
GLU 6080.0029
CYS 6090.0019
ALA 6100.0022
THR 6110.0017
PRO 6120.0011
SER 6130.0019
ASP 6140.0021
LYS 6150.0023
GLN 6160.0027
GLY 6170.0037
MET 6180.0036
PRO 6190.0037
VAL 6200.0027
LEU 6210.0037
SER 6220.0046
LEU 6230.0037
ASN 6240.0044
ILE 6250.0045
THR 6260.0054
CYS 6270.0053
GLU 10.0664
ALA 20.0878
ALA 30.0729
ALA 40.0278
LYS 50.0403
MET 60.0371
GLN 70.0332
ARG 80.0387
LEU 90.0338
VAL 100.0279
LEU 110.0599
LEU 120.0622
LEU 130.0429
ALA 140.0589
ILE 150.0841
SER 160.0606
LEU 170.0493
LEU 180.0610
LEU 190.0590
TYR 200.0409
GLN 210.0382
ASP 220.0389
LEU 230.0236
PRO 240.0137
VAL 250.0099
ARG 260.0062
SER 270.0054
GLU 280.0062
PHE 290.0065
GLU 300.0050
LEU 310.0033
ASP 320.0046
ARG 330.0046
ILE 340.0035
CYS 350.0043
GLY 360.0031
TYR 370.0024
GLY 380.0021
THR 390.0025
ALA 400.0032
ARG 410.0039
CYS 420.0056
ARG 430.0063
LYS 440.0079
LYS 450.0072
CYS 460.0047
ARG 470.0040
SER 480.0032
GLN 490.0021
GLU 500.0025
TYR 510.0034
ARG 520.0052
ILE 530.0056
GLY 540.0073
ARG 550.0083
CYS 560.0074
PRO 570.0084
ASN 580.0091
THR 590.0101
TYR 600.0088
ALA 610.0070
CYS 620.0055
CYS 630.0043
LEU 640.0027
ARG 650.0016
LYS 660.0016
TRP 670.0020
ASP 680.0021
GLU 690.0024
SER 700.0029
LEU 710.0038
LEU 720.0041
ASN 730.0039
ARG 740.0039
THR 750.0044
LYS 760.0042
PRO 770.0036
GLU 780.0038
ALA 790.0034
ALA 800.0027
ALA 810.0084
LYS 820.0087
LYS 830.0079
GLU 840.0102
MET 850.0091
ASN 860.0097
LEU 870.0074
SER 880.0075
VAL 890.0056
GLY 900.0067
LEU 910.0059
GLY 920.0079
GLY 930.0093
GLY 940.0105
SER 950.0084
ASN 960.0087
LEU 970.0074
SER 980.0090
VAL 990.0087
GLY 1000.0108
LEU 1010.0102
GLY 1020.0129
GLU 1030.0122
ILE 1040.0153
GLY 1050.0165
GLY 1060.0175
GLY 1070.0144
SER 1080.0112
LYS 1090.0081
LEU 1100.0058
LEU 1110.0054
ASP 1120.0053
ILE 1130.0035
ASN 1140.0043
LEU 1150.0030
GLY 1160.0035
ARG 1170.0055
GLY 1180.0048
GLY 1190.0074
GLY 1200.0086
SER 1210.0058
MET 1220.0061
VAL 1230.0046
ASP 1240.0057
LEU 1250.0049
THR 1260.0059
PHE 1270.0058
GLY 1280.0068
GLY 1290.0068
VAL 1300.0069
GLY 1310.0045
GLY 1320.0042
GLY 1330.0034
SER 1340.0038
THR 1350.0033
PHE 1360.0047
THR 1370.0050
PHE 1380.0039
PHE 1390.0040
PRO 1400.0029
LEU 1410.0031
VAL 1420.0040
ILE 1430.0033
GLY 1440.0038
GLY 1450.0062
GLY 1460.0081
SER 1470.0072
ASP 1480.0063
ALA 1490.0049
MET 1500.0036
TYR 1510.0021
LEU 1520.0011
GLY 1530.0019
PHE 1540.0036
ALA 1550.0047
ALA 1560.0035
GLY 1570.0027
GLY 1580.0026
GLY 1590.0023
SER 1600.0024
ALA 1610.0051
GLY 1620.0060
GLY 1630.0064
GLU 1640.0067
ASN 1650.0061
HIS 1660.0062
VAL 1670.0050
ALA 1680.0057
PHE 1690.0052
GLY 1700.0066
PRO 1710.0099
GLY 1720.0093
PRO 1730.0075
GLY 1740.0062
VAL 1750.0052
ASP 1760.0059
LEU 1770.0059
THR 1780.0068
PHE 1790.0073
GLY 1800.0085
GLY 1810.0088
VAL 1820.0091
GLN 1830.0082
PHE 1840.0078
ALA 1850.0074
MET 1860.0076
VAL 1870.0090
ASN 1880.0087
ASN 1890.0133
GLY 1900.0140
PRO 1910.0187
GLY 1920.0200
PRO 1930.0129
GLY 1940.0052
GLU 1950.0071
SER 1960.0096
PHE 1970.0091
THR 1980.0109
ALA 1990.0085
GLN 2000.0115
PRO 2010.0063
ALA 2020.0064
ASP 2030.0116
MET 2040.0115
GLN 2050.0132
ALA 2060.0099
GLY 2070.0177
ILE 2080.0083
LYS 2090.0168
GLY 2100.0154
PRO 2110.0112
GLY 2120.0138
PRO 2130.0192
GLY 2140.0243
GLY 2150.0213
SER 2160.0275
ILE 2170.0284
GLN 2180.0284
VAL 2190.0317
ILE 2200.0303
ASN 2210.0269
GLY 2220.0284
SER 2230.0260
THR 2240.0231
ILE 2250.0264
GLY 2260.0257
THR 2270.0210
GLY 2280.0207
SER 2290.0179
LYS 2300.0180
LYS 2310.0158
THR 2320.0161
ILE 2330.0164
LEU 2340.0173
ILE 2350.0172
TYR 2360.0149
SER 2370.0141
ILE 2380.0133
ILE 2390.0111
GLY 2400.0113
VAL 2410.0068
LYS 2420.0054
LYS 2430.0061
GLY 2440.0062
THR 2450.0056
LEU 2460.0110
ALA 2470.0111
TRP 2480.0110
ALA 2490.0116
ARG 2500.0119
THR 2510.0180
GLY 2520.0189
PHE 2530.0167
SER 2540.0189
PRO 2550.0181
ALA 2560.0215
LYS 2570.0239
LYS 2580.0221
LEU 2590.0193
ASN 2600.0200
ALA 2610.0152
GLY 2620.0119
VAL 2630.0082
VAL 2640.0062
ARG 2650.0073
VAL 2660.0094
PHE 2670.0089
PHE 2680.0106
LEU 2690.0091
ASN 2700.0108
GLN 2710.0062
LYS 2720.0062
LYS 2730.0079
ALA 2740.0047
LYS 2750.0034
ASP 2760.0095
VAL 2770.0104
LEU 2780.0097
ARG 2790.0154
LYS 2800.0187
THR 2810.0254
SER 2820.0267
ARG 2830.0127
PRO 2840.0103
MET 2850.0105
VAL 2860.0332
ASP 2870.0184
LEU 2880.0264
THR 2890.0140
PHE 2900.0161
GLY 2910.0419
GLY 2920.0542

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.