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***  TLR_8_simulation  ***

<R2> analysis for 2608260327253941399

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1038
GLU 270.0034
PRO 280.0028
CYS 290.0022
VAL 300.0019
GLU 310.0025
VAL 320.0023
VAL 330.0032
PRO 340.0037
ASN 350.0039
ILE 360.0033
THR 370.0025
TYR 380.0020
GLN 390.0013
CYS 400.0016
MET 410.0013
GLU 420.0019
LEU 430.0024
ASN 440.0030
PHE 450.0029
TYR 460.0034
LYS 470.0032
ILE 480.0027
PRO 490.0030
ASP 500.0037
ASN 510.0039
LEU 520.0034
PRO 530.0038
PHE 540.0040
SER 550.0038
THR 560.0030
LYS 570.0027
ASN 580.0020
LEU 590.0015
ASP 600.0009
LEU 610.0012
SER 620.0012
PHE 630.0019
ASN 640.0022
PRO 650.0029
LEU 660.0025
ARG 670.0027
HIS 680.0026
LEU 690.0022
GLY 700.0026
SER 710.0025
TYR 720.0026
SER 730.0024
PHE 740.0023
PHE 750.0030
SER 760.0033
PHE 770.0028
PRO 780.0031
GLU 790.0031
LEU 800.0022
GLN 810.0021
VAL 820.0014
LEU 830.0009
ASP 840.0007
LEU 850.0010
SER 860.0014
ARG 870.0019
CYS 880.0019
GLU 890.0024
ILE 900.0021
GLN 910.0024
THR 920.0022
ILE 930.0017
GLU 940.0020
ASP 950.0018
GLY 960.0018
ALA 970.0017
TYR 980.0015
GLN 990.0019
SER 1000.0023
LEU 1010.0019
SER 1020.0022
HIS 1030.0022
LEU 1040.0014
SER 1050.0017
THR 1060.0013
LEU 1070.0009
ILE 1080.0011
LEU 1090.0012
THR 1100.0017
GLY 1110.0021
ASN 1120.0018
PRO 1130.0023
ILE 1140.0020
GLN 1150.0023
SER 1160.0020
LEU 1170.0015
ALA 1180.0014
LEU 1190.0009
GLY 1200.0011
ALA 1210.0010
PHE 1220.0007
SER 1230.0010
GLY 1240.0014
LEU 1250.0011
SER 1260.0016
SER 1270.0017
LEU 1280.0013
GLN 1290.0017
LYS 1300.0016
LEU 1310.0014
VAL 1320.0016
ALA 1330.0016
VAL 1340.0020
GLU 1350.0022
THR 1360.0019
ASN 1370.0020
LEU 1380.0017
ALA 1390.0018
SER 1400.0015
LEU 1410.0013
GLU 1420.0012
ASN 1430.0011
PHE 1440.0011
PRO 1450.0008
ILE 1460.0008
GLY 1470.0008
HIS 1480.0007
LEU 1490.0009
LYS 1500.0012
THR 1510.0014
LEU 1520.0014
LYS 1530.0018
GLU 1540.0018
LEU 1550.0017
ASN 1560.0020
VAL 1570.0018
ALA 1580.0021
HIS 1590.0022
ASN 1600.0020
LEU 1610.0020
ILE 1620.0017
GLN 1630.0016
SER 1640.0015
PHE 1650.0014
LYS 1660.0013
LEU 1670.0013
PRO 1680.0012
GLU 1690.0010
TYR 1700.0010
PHE 1710.0012
SER 1720.0011
ASN 1730.0010
LEU 1740.0012
THR 1750.0014
ASN 1760.0015
LEU 1770.0016
GLU 1780.0019
HIS 1790.0019
LEU 1800.0018
ASP 1810.0020
LEU 1820.0019
SER 1830.0021
SER 1840.0022
ASN 1850.0020
LYS 1860.0019
ILE 1870.0016
GLN 1880.0014
SER 1890.0012
ILE 1900.0011
TYR 1910.0009
CYS 1920.0009
THR 1930.0010
ASP 1940.0012
LEU 1950.0011
ARG 1960.0011
VAL 1970.0011
LEU 1980.0012
HIS 1990.0010
GLN 2000.0010
MET 2010.0011
PRO 2020.0012
LEU 2030.0014
LEU 2040.0015
ASN 2050.0016
LEU 2060.0016
SER 2070.0018
LEU 2080.0017
ASP 2090.0018
LEU 2100.0017
SER 2110.0018
LEU 2120.0018
ASN 2130.0017
PRO 2140.0016
MET 2150.0013
ASN 2160.0011
PHE 2170.0008
ILE 2180.0007
GLN 2190.0006
PRO 2200.0004
GLY 2210.0005
ALA 2220.0007
PHE 2230.0008
LYS 2240.0007
GLU 2250.0010
ILE 2260.0011
ARG 2270.0013
LEU 2280.0014
HIS 2290.0017
LYS 2300.0016
LEU 2310.0014
THR 2320.0014
LEU 2330.0013
ARG 2340.0014
ASN 2350.0014
ASN 2360.0013
PHE 2370.0012
ASP 2380.0015
SER 2390.0013
LEU 2400.0010
ASN 2410.0011
VAL 2420.0009
MET 2430.0007
LYS 2440.0006
THR 2450.0006
CYS 2460.0006
ILE 2470.0004
GLN 2480.0003
GLY 2490.0004
LEU 2500.0006
ALA 2510.0006
GLY 2520.0009
LEU 2530.0010
GLU 2540.0014
VAL 2550.0014
HIS 2560.0018
ARG 2570.0015
LEU 2580.0011
VAL 2590.0011
LEU 2600.0009
GLY 2610.0011
GLU 2620.0012
PHE 2630.0015
ARG 2640.0014
ASN 2650.0019
GLU 2660.0020
GLY 2670.0020
ASN 2680.0015
LEU 2690.0014
GLU 2700.0018
LYS 2710.0016
PHE 2720.0014
ASP 2730.0016
LYS 2740.0016
SER 2750.0014
ALA 2760.0009
LEU 2770.0007
GLU 2780.0010
GLY 2790.0008
LEU 2800.0008
CYS 2810.0013
ASN 2820.0011
LEU 2830.0011
THR 2840.0015
ILE 2850.0014
GLU 2860.0018
GLU 2870.0015
PHE 2880.0009
ARG 2890.0007
LEU 2900.0006
ALA 2910.0012
TYR 2920.0008
LEU 2930.0010
ASP 2940.0013
TYR 2950.0015
TYR 2960.0015
LEU 2970.0023
ASP 2980.0028
GLY 2990.0025
ILE 3000.0020
ILE 3010.0025
ASP 3020.0022
LEU 3030.0016
PHE 3040.0014
ASN 3050.0019
CYS 3060.0017
LEU 3070.0015
THR 3080.0021
ASN 3090.0024
VAL 3100.0019
SER 3110.0021
SER 3120.0015
PHE 3130.0008
SER 3140.0004
LEU 3150.0007
VAL 3160.0014
SER 3170.0020
VAL 3180.0018
THR 3190.0024
ILE 3200.0024
GLU 3210.0031
ARG 3220.0034
VAL 3230.0028
LYS 3240.0033
ASP 3250.0029
PHE 3260.0024
SER 3270.0033
TYR 3280.0033
ASN 3290.0033
PHE 3300.0026
GLY 3310.0028
TRP 3320.0022
GLN 3330.0023
HIS 3340.0015
LEU 3350.0006
GLU 3360.0005
LEU 3370.0014
VAL 3380.0021
ASN 3390.0029
CYS 3400.0028
LYS 3410.0034
PHE 3420.0033
GLY 3430.0038
GLN 3440.0036
PHE 3450.0030
PRO 3460.0026
THR 3470.0033
LEU 3480.0027
LYS 3490.0034
LEU 3500.0030
LYS 3510.0037
SER 3520.0038
LEU 3530.0026
LYS 3540.0025
ARG 3550.0014
LEU 3560.0006
THR 3570.0009
PHE 3580.0018
THR 3590.0027
SER 3600.0038
ASN 3610.0038
LYS 3620.0043
GLY 3630.0044
GLY 3640.0043
ASN 3650.0039
ALA 3660.0037
PHE 3670.0038
SER 3680.0041
GLU 3690.0038
VAL 3700.0031
ASP 3710.0037
LEU 3720.0037
PRO 3730.0044
SER 3740.0039
LEU 3750.0029
GLU 3760.0026
PHE 3770.0014
LEU 3780.0005
ASP 3790.0011
LEU 3800.0021
SER 3810.0029
ARG 3820.0041
ASN 3830.0044
GLY 3840.0050
LEU 3850.0045
SER 3860.0048
PHE 3870.0040
LYS 3880.0046
GLY 3890.0043
CYS 3900.0032
CYS 3910.0027
SER 3920.0032
GLN 3930.0034
SER 3940.0043
ASP 3950.0036
PHE 3960.0030
GLY 3970.0044
THR 3980.0038
ILE 3990.0038
SER 4000.0036
LEU 4010.0024
LYS 4020.0024
TYR 4030.0012
LEU 4040.0004
ASP 4050.0014
LEU 4060.0024
SER 4070.0031
PHE 4080.0042
ASN 4090.0043
GLY 4100.0048
VAL 4110.0045
ILE 4120.0036
THR 4130.0039
MET 4140.0034
SER 4150.0039
SER 4160.0034
ASN 4170.0025
PHE 4180.0022
LEU 4190.0031
GLY 4200.0033
LEU 4210.0023
GLU 4220.0022
GLN 4230.0023
LEU 4240.0014
GLU 4250.0015
HIS 4260.0011
LEU 4270.0009
ASP 4280.0017
PHE 4290.0022
GLN 4300.0028
HIS 4310.0036
SER 4320.0034
ASN 4330.0037
LEU 4340.0032
LYS 4350.0036
GLN 4360.0035
MET 4370.0027
SER 4380.0028
GLU 4390.0031
PHE 4400.0027
SER 4410.0022
VAL 4420.0023
PHE 4430.0016
LEU 4440.0018
SER 4450.0020
LEU 4460.0013
ARG 4470.0015
ASN 4480.0014
LEU 4490.0008
ILE 4500.0009
TYR 4510.0009
LEU 4520.0013
ASP 4530.0018
ILE 4540.0020
SER 4550.0024
HIS 4560.0028
THR 4570.0029
HIS 4580.0030
THR 4590.0026
ARG 4600.0025
VAL 4610.0021
ALA 4620.0024
PHE 4630.0021
ASN 4640.0018
GLY 4650.0018
ILE 4660.0019
PHE 4670.0015
ASN 4680.0015
GLY 4690.0014
LEU 4700.0011
SER 4710.0010
SER 4720.0009
LEU 4730.0009
GLU 4740.0010
VAL 4750.0012
LEU 4760.0014
LYS 4770.0019
MET 4780.0020
ALA 4790.0021
GLY 4800.0023
ASN 4810.0022
SER 4820.0023
PHE 4830.0021
GLN 4840.0021
GLU 4850.0020
ASN 4860.0021
PHE 4870.0021
LEU 4880.0020
PRO 4890.0020
ASP 4900.0018
ILE 4910.0019
PHE 4920.0017
THR 4930.0016
GLU 4940.0016
LEU 4950.0015
ARG 4960.0013
ASN 4970.0013
LEU 4980.0014
THR 4990.0013
PHE 5000.0015
LEU 5010.0017
ASP 5020.0020
LEU 5030.0020
SER 5040.0020
GLN 5050.0020
CYS 5060.0021
GLN 5070.0021
LEU 5080.0021
GLU 5090.0021
GLN 5100.0022
LEU 5110.0022
SER 5120.0021
PRO 5130.0021
THR 5140.0021
ALA 5150.0021
PHE 5160.0020
ASN 5170.0019
SER 5180.0019
LEU 5190.0018
SER 5200.0018
SER 5210.0017
LEU 5220.0018
GLN 5230.0018
VAL 5240.0018
LEU 5250.0019
ASN 5260.0019
MET 5270.0021
SER 5280.0018
HIS 5290.0017
ASN 5300.0020
ASN 5310.0020
PHE 5320.0022
PHE 5330.0022
SER 5340.0023
LEU 5350.0024
ASP 5360.0025
THR 5370.0023
PHE 5380.0024
PRO 5390.0024
TYR 5400.0023
LYS 5410.0024
CYS 5420.0022
LEU 5430.0021
ASN 5440.0021
SER 5450.0021
LEU 5460.0020
GLN 5470.0021
VAL 5480.0021
LEU 5490.0021
ASP 5500.0021
TYR 5510.0021
SER 5520.0020
LEU 5530.0019
ASN 5540.0020
HIS 5550.0020
ILE 5560.0022
MET 5570.0023
THR 5580.0024
SER 5590.0025
LYS 5600.0025
LYS 5610.0027
GLN 5620.0027
GLU 5630.0027
LEU 5640.0026
GLN 5650.0026
HIS 5660.0026
PHE 5670.0024
PRO 5680.0023
SER 5690.0023
SER 5700.0022
LEU 5710.0022
ALA 5720.0024
PHE 5730.0023
LEU 5740.0023
ASN 5750.0022
LEU 5760.0022
THR 5770.0021
GLN 5780.0020
ASN 5790.0021
ASP 5800.0021
PHE 5810.0022
ALA 5820.0023
CYS 5830.0024
THR 5840.0025
CYS 5850.0027
GLU 5860.0027
HIS 5870.0026
GLN 5880.0027
SER 5890.0028
PHE 5900.0027
LEU 5910.0026
GLN 5920.0027
TRP 5930.0027
ILE 5940.0026
LYS 5950.0027
ASP 5960.0028
GLN 5970.0027
ARG 5980.0025
GLN 5990.0026
LEU 6000.0025
LEU 6010.0024
VAL 6020.0024
GLU 6030.0023
VAL 6040.0023
GLU 6050.0023
ARG 6060.0021
MET 6070.0022
GLU 6080.0022
CYS 6090.0022
ALA 6100.0021
THR 6110.0022
PRO 6120.0023
SER 6130.0021
ASP 6140.0022
LYS 6150.0023
GLN 6160.0022
GLY 6170.0021
MET 6180.0023
PRO 6190.0024
VAL 6200.0024
LEU 6210.0026
SER 6220.0026
LEU 6230.0026
ASN 6240.0027
ILE 6250.0028
THR 6260.0029
CYS 6270.0030
GLU 10.0380
ALA 20.0608
ALA 30.0610
ALA 40.0285
LYS 50.0166
MET 60.0291
GLN 70.0311
ARG 80.0258
LEU 90.0175
VAL 100.0149
LEU 110.0410
LEU 120.0435
LEU 130.0246
ALA 140.0367
ILE 150.0605
SER 160.0450
LEU 170.0326
LEU 180.0402
LEU 190.0438
TYR 200.0316
GLN 210.0237
ASP 220.0253
LEU 230.0207
PRO 240.0100
VAL 250.0095
ARG 260.0082
SER 270.0065
GLU 280.0067
PHE 290.0068
GLU 300.0049
LEU 310.0040
ASP 320.0049
ARG 330.0047
ILE 340.0036
CYS 350.0039
GLY 360.0035
TYR 370.0023
GLY 380.0024
THR 390.0033
ALA 400.0042
ARG 410.0045
CYS 420.0057
ARG 430.0063
LYS 440.0076
LYS 450.0075
CYS 460.0062
ARG 470.0052
SER 480.0052
GLN 490.0046
GLU 500.0052
TYR 510.0062
ARG 520.0070
ILE 530.0072
GLY 540.0078
ARG 550.0080
CYS 560.0067
PRO 570.0069
ASN 580.0078
THR 590.0088
TYR 600.0082
ALA 610.0073
CYS 620.0063
CYS 630.0057
LEU 640.0050
ARG 650.0045
LYS 660.0043
TRP 670.0041
ASP 680.0036
GLU 690.0038
SER 700.0032
LEU 710.0029
LEU 720.0034
ASN 730.0033
ARG 740.0029
THR 750.0032
LYS 760.0028
PRO 770.0030
GLU 780.0028
ALA 790.0031
ALA 800.0035
ALA 810.0080
LYS 820.0058
LYS 830.0064
GLU 840.0069
MET 850.0059
ASN 860.0075
LEU 870.0060
SER 880.0067
VAL 890.0053
GLY 900.0064
LEU 910.0054
GLY 920.0067
GLY 930.0076
GLY 940.0091
SER 950.0075
ASN 960.0079
LEU 970.0063
SER 980.0071
VAL 990.0059
GLY 1000.0070
LEU 1010.0057
GLY 1020.0079
GLU 1030.0067
ILE 1040.0128
GLY 1050.0164
GLY 1060.0207
GLY 1070.0161
SER 1080.0118
LYS 1090.0056
LEU 1100.0022
LEU 1110.0033
ASP 1120.0030
ILE 1130.0025
ASN 1140.0029
LEU 1150.0016
GLY 1160.0019
ARG 1170.0037
GLY 1180.0035
GLY 1190.0054
GLY 1200.0062
SER 1210.0045
MET 1220.0051
VAL 1230.0050
ASP 1240.0057
LEU 1250.0059
THR 1260.0065
PHE 1270.0066
GLY 1280.0069
GLY 1290.0072
VAL 1300.0072
GLY 1310.0070
GLY 1320.0067
GLY 1330.0067
SER 1340.0070
THR 1350.0072
PHE 1360.0076
THR 1370.0081
PHE 1380.0067
PHE 1390.0072
PRO 1400.0060
LEU 1410.0033
VAL 1420.0043
ILE 1430.0014
GLY 1440.0019
GLY 1450.0062
GLY 1460.0090
SER 1470.0081
ASP 1480.0071
ALA 1490.0056
MET 1500.0036
TYR 1510.0039
LEU 1520.0038
GLY 1530.0047
PHE 1540.0072
ALA 1550.0088
ALA 1560.0080
GLY 1570.0066
GLY 1580.0046
GLY 1590.0051
SER 1600.0050
ALA 1610.0083
GLY 1620.0081
GLY 1630.0078
GLU 1640.0074
ASN 1650.0073
HIS 1660.0067
VAL 1670.0063
ALA 1680.0057
PHE 1690.0053
GLY 1700.0051
PRO 1710.0044
GLY 1720.0051
PRO 1730.0071
GLY 1740.0072
VAL 1750.0070
ASP 1760.0063
LEU 1770.0075
THR 1780.0069
PHE 1790.0082
GLY 1800.0077
GLY 1810.0062
VAL 1820.0090
GLN 1830.0085
PHE 1840.0106
ALA 1850.0108
MET 1860.0136
VAL 1870.0205
ASN 1880.0224
ASN 1890.0323
GLY 1900.0332
PRO 1910.0257
GLY 1920.0314
PRO 1930.0258
GLY 1940.0085
GLU 1950.0044
SER 1960.0279
PHE 1970.0266
THR 1980.0058
ALA 1990.0099
GLN 2000.0068
PRO 2010.0206
ALA 2020.0207
ASP 2030.0103
MET 2040.0157
GLN 2050.0056
ALA 2060.0161
GLY 2070.0067
ILE 2080.0051
LYS 2090.0043
GLY 2100.0097
PRO 2110.0112
GLY 2120.0173
PRO 2130.0260
GLY 2140.0278
GLY 2150.0217
SER 2160.0275
ILE 2170.0211
GLN 2180.0285
VAL 2190.0309
ILE 2200.0364
ASN 2210.0298
GLY 2220.0306
SER 2230.0266
THR 2240.0242
ILE 2250.0280
GLY 2260.0254
THR 2270.0194
GLY 2280.0183
SER 2290.0169
LYS 2300.0165
LYS 2310.0136
THR 2320.0135
ILE 2330.0150
LEU 2340.0154
ILE 2350.0164
TYR 2360.0139
SER 2370.0131
ILE 2380.0125
ILE 2390.0097
GLY 2400.0100
VAL 2410.0048
LYS 2420.0035
LYS 2430.0036
GLY 2440.0040
THR 2450.0043
LEU 2460.0102
ALA 2470.0087
TRP 2480.0086
ALA 2490.0082
ARG 2500.0087
THR 2510.0153
GLY 2520.0168
PHE 2530.0159
SER 2540.0193
PRO 2550.0200
ALA 2560.0260
LYS 2570.0302
LYS 2580.0297
LEU 2590.0278
ASN 2600.0301
ALA 2610.0252
GLY 2620.0200
VAL 2630.0161
VAL 2640.0120
ARG 2650.0089
VAL 2660.0100
PHE 2670.0109
PHE 2680.0136
LEU 2690.0136
ASN 2700.0161
GLN 2710.0112
LYS 2720.0119
LYS 2730.0143
ALA 2740.0106
LYS 2750.0083
ASP 2760.0183
VAL 2770.0208
LEU 2780.0174
ARG 2790.0272
LYS 2800.0343
THR 2810.0493
SER 2820.0488
ARG 2830.0291
PRO 2840.0238
MET 2850.0151
VAL 2860.0776
ASP 2870.0463
LEU 2880.0512
THR 2890.0228
PHE 2900.0348
GLY 2910.0760
GLY 2920.1038

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.